>input_sequence_77589
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-----------------------------------------------------------ATGTGGAGGCCCTCCATGAGC
TCCTCCAGCGACAGGTTGCCGTTCTTGTCCTTGTCCATGAGGTGGAACATCTGCACGTACTTGTCCAGCTCCTCCACCGG
CATGTTCCGCGCCACCACGCCCAGCGCCTTCTTCTTGAACTTGTTCATCGCCGAGAACTGCTGCAGCCGAGACCGCACCG
CCTCGCCCAGCGACACGTTCGGCGCCGTGTCCGCGTTCTTCAGCCACGGGTGCTCTGCCAATCACAATCACAATCACAAT
GCTTGCGTTAGTTCTACGTCCATCCACTCCACGTGCTAATTAG---TAGTAGAAGTGCAATGGCGAAGTACCAAGAACTT
GCGAGGCCGTGAGCCGGGTGGCGGGGTCGGGGTCGAGCATCTGCCTGATGAGGTCCTTGGGGTTGCCGGACACCCTGGGC
CAGGGCTCCCGGTTGAAGTCGAGGCCGCCGCGGATAATGGCCTGCGCGATCTTCTCGTCGTTGTCCCCCCAGAAGGGCGG
CACACCGCAGAGGAGGATGTAG----------------------------------------------------------
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>chr7D_1_TraesCS7D01G267800
CCTCTTTGACTAGTGATTTTACAGTATTTTTTCGCTTACGATGAGTTGCACGCCCTTGGAAATATTTGGTGTTCTGATCA
CCAGCAGCAAGCCAGTCGATCCGTGATCTCTGTCTATACAGCAGTTCCTCACGAGCATAAATCTCCCGCAGCTGTTCTTC
CAGTTCGCGGACCTCAGAGTCCAGACCCAAGTGCTCTGTACTTAGCATAAGAGGAAGGTAGCTAGCTAGTAGTGTTGGTG
CAGATACATACATACTGTTGTGTACGCTGCGCGTACGAATTCCTTGAAAACAAATTAATATCGCGCGTGACACTAGCCGG
CCATTGCCTTGATTTTTTTTTATGTGCGATCGAGTTAAGCCTTGATTCATAGAGGTAGCGAACCATCAATCAGGTAGTTT
CGTTGGCTGAAACAACTTCGGGTCAGTCGACTGACCTATAGTCAGTCCCATTTTTTTGTGTGTGAGAAAATATCATTCAT
TCATTTC------TTGTCACTGCACAACCCCAGGTACGTCCATTTGTTCGTGCCTAAGTTGATCTCGTTAACCCTGCAGC
TTACATGCACAAAAAGAATCACATCTAGCAGTAGAACAAATTGAATTCACGA-------GGAGGAAGTTTCTTCTTTGCA
TAGTTTCCGGCTGAGGGTGCTGAAGTTGGCCCGCGAGAACTGGCGGG------TCCTCCAGTCCGCCCCGGACTTCATCA
TCAGCTCGAACTCCTGGTAGCTGATGCGTCCGTCCCGGTCGGTGTCGACGTCGCGGATGATCTCGAGGATGGCCTGCTCG
TTGGGCCCCAGCTCCTGCCGGAGCTCGTCGATCTCGATGAAGCCGCTGCCGTCCTTGTCGAAGTAGCGGAACGCCGCCGC
CAGGTACTTCTCGTTGGTCATCTTCTTGAGGTGCAGCGACACCGTCACGAACTCGTCGCAGTCCAGCGTCCCGTTGCCGT
CCGTGTCGGCGGCCTCGAGCAGCATCCTGATCTCCGACTCCGGCACGCGCTGGCCGTTGATGTGGAGGCCCTCCATGAGC
TCCTCCAGCGACAGGTTGCCGTTCTTGTCCTTGTCCATGAGGTGGAACATCTGCACGTACTTGTCCAGCTCCTCCACCGG
CATGTTCCGCGCCACCACGCCCAGCGCCTTCTTCTTGAACTTGTTCATCGCCGAGAACTGCTGCAGCCGAGACCGCACCG
CCTCGCCCAGCGACACGTTCGGCGCCGTGTCCGCGTTCTTCAGCCACGGGTGCTCTGCCAATCACAATCACAATCACAAT
GCTTGCGTTAGTTCTACGTCCATCCACTCCACGTGCTAATTAG---TAGTAGAAGTGCAATGGCGAAGTACCAAGAACTT
GCGAGGCCGTGAGCCGGGTGGCGGGGTCGGGGTCGAGCATCTGCCTGATGAGGTCCTTGGGGTTGCCGGACACCCTGGGC
CAGGGCTCCCGGTTGAAGTCGAGGCCGCCGCGGATAATGGCCTGCGCGATCTTCTCGTCGTTGTCCCCCCAGAAGGGCGG
CACACCGCAGAGGAGGATGTAGAGGATGACGCCGGCGCTCCACACGTCCACCTCCTGCCCGTAGTTACGCTTGAGGACCT
CGGGGGCCATGTAGTAGGCGCTCCCCACCACCTCCGTGAAGCGATCGCCGGGGTTGAAGAACACCGAGAGGCCGAAGTCG
ATCACCTTGAGGGGGGCGTCCTCGGATTTGTTGGCGAACAGGAAGTTCTCCGGCTTGAGATCACGGTGGATCACCCCGTT
CGAATGGCACAACTGCCACATTGGTTGAGCAAACTTGGTTAGTTCGTTGCCTTCGTTGCGATATTGGTGCGCAAGAACGT
CGATCGAGAAGCTTGTTGAGGTGTTCTTGAACGAATCTTGCATGCGGGTTGCGTACCTGGATGACGTTGACGATGGTGCG
GAAGACCTTGGCGGCGGCGCGCTCGGAGTAGTGGCCGCGGGCGACGATGCGGTCGAAGAGCTCGCCGCCCTCGCAGAGCT
CCATGACGAGGTGCACGGAGCCTTCCTGGTCCTCGCGGGCCTCCCGCAGCCGCACAACGGCCGCGCCGCCGCGGGCCGAC
ATGCGCCGCATGATGGCCACCTCCCTCCGCACGTCGGCCGCGTG---CGCCGCGGCCGCTGCGGCGGCGGCTCTCGCGGC
GGCTTCCGCGCCCCCGCCACCCGCGGCCTTGCGGTTCGCCCCGCGGCCGCCCCGGCGGCGGTGCCTCCGGATGGTCTTGC
ACGCGAGCGCCTCGCCCGTGGCGGCGTCCTTGCAGCGGCGCGTCACCCCGAACTCCCCGCGGCCGAGCTCCTTCCCGAGC
ACGTAGCGCCGCCCGAACTCGGCGGACGTCATCTTGGCCACGAGCTCCTCCTCCTCGGTGCCGCCGGCGGGGCCGTCACC
ATTGTTGCGCCTGGAGCTGCCGTGGTCGGCCTTCCTGGCGGAGCTGTCCGAGCCCGCGCGGGCGCTGCTGGTGCTGGCCC
CGGAGGCGGCGTTGGCGGCGGCGGCGTCGCGTTCGGTGACGGGGAGGACGAAGGAGAGGTTGCCG
>chr7B_449
CATTTT--------------------------------------------------------------------------
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-----------------------------------------------------TTGTGTGTGTGAGAAAATATCTTTCAT
TCATTTC------TCGTCACTGCACAACCCCAGGTACGTCCATTTGTTCGTGCCTAAGTTGATCTCGTTAACTCTGCAGC
TTACATGCACATAAAGAATCACATCTAGCCGTAGAACAAATTGAATTCACGA-------GGAGGAAGTTTCTTCTTTGCA
TAGTTTCCGGCTGAGGGTGCTGAAGTTGGCTCGCGAGAACTGGCGGGACGCGTTCCTCCAGTCCGCCCCGGACTTCATCA
TCAGCTCGAACTCCTGGTAGCTGATGCGTCCGTCCCGGTCGGTGTCGACGTCGCGGATGATCTCGAGGATGGCCTGCTCG
TTGGGCCCCAGCTCCTGCCTCAGCTCGTCGATCTCGATGAAGCCGCTGCCGTCCTTGTCGAAGTAGCGGAACGCCGCCGC
CAGGTACTTCTCGTTGGTCATCTTCTTGAGGTGCAGCGACACCGTCACGAACTCGTCGCAGTCCAGCGTCCCGTTGCCAT
CCGTGTCCGCGGCTTCGAGCAGCATCCTGATCTCCGACTCCGGCACGCGCTGGCCGTTGATGTGGAGGCCCTCCATGAGC
TCCTCCAGCGACAGGTTGCCGTTCTTGTCCTTGTCCATGAGGTGGAACATCTGCACGTACTTGTCCAGCTCCTCCACCGG
CATGTTCCGCGCCACCACGCCCAGCGCCTTCTTCTTGAACTTGTTCATCGCCGAGAACTGCTGCAGCCGAGACCGCACCG
CCTCGCCCAAAGACACGTTCGGCGCCGTGTCCGCGTTCTTCAGCCACGGGTGCTCTGCCAATCACAATCACAATCACAAT
GCTTGCGTTAATTCTACCTCCATCCGCTCCACATGCTAATTAGTACTAGTAGAAGTGCAATGGCGCAGTACCAAGAACTT
GCGCGGCCGTGAGCCGGGTGGCGGGGTCGGGGTCGAGCATCCGCCGTATGAGGTCCTTGGCGTTGCCGGACACCCTGGGC
CAGGGCTCCCGGTTGAAGTCGAGGCCGCCGCGGATGATGGCCTGCGCGATCTTCTCGTCGTTGTCCCCCCAGAAGGGCGG
CACACCGCAGAGGAGGATGTAGAGGATGACGCCGGCGCTCCACACGTCCACCTCCTGCCCGTAGTTACGCTTCAGGACCT
CGGGGGCCATGTAGTAGGCGCTTCCCACCACCTCCGTGAAGCGATCGCCGGGGTTGAAGAACACCGAGAGGCCGAAGTCG
ATGACCTTGAGGGGGGCGTCCTCGGATTTGTTGGCGAACAGGAAGTTCTCCGGCTTGAGATCACGGTGGATCACCCCATT
CGAATGGCACAACTGCCACATTGGTTGAGCAGACATAGTTAGTTCGTCGCCTTCGTTGCGAGATTGGTGCGCAAGAACGT
TGATCGAGAAGCGTATTCAAGTGTTCTTGAACGAATCTTGCATGCGGATTGCGTACCTGGATGACGTTGACGATGGTGCG
GAAGACCTTGGCGGCGGCGCGCTCGGAGTAGTGGCCGCGGGCGACGATGCGGTCGAAGAGCTCGCCGCCCTCGCAGAGCT
CCATGACGAGGTGCACGGAGCCTTCCTGGTCCTCGCGGGCCTCTCGCAGCCGCACAACGGCCGTGCCACCGCGGGCCGAC
ATGCGTCGCATGATGGCCACCTCCCTCCGCACGTCGGCCGCGTG---CGCCGCGGCG---GCGGCGGCGGCTCTCGCGGC
GGCTTCCGCGCCCCCGCCACCCGCGGCCTTGCGGTTCGCCCCGCGGCCGCCCCGGCGGCGGTGCCTCCGGATGGTTTTGC
ACGCGAGCGCCTCGCCCGTGGCGGCGTCCTTGCAGCGGCGCGTCACCCCGAACTCACCCCGGCCCAGCTCCTTTCCCAGC
ACGTAGCGCCGCCCGAACTCGGCGGTCGTCGTCTTGGCCACGAGCTCCTCCTCCTCGGTGCCGCCGGCGGGGCCGTCACC
ATTATTGCGCCTGGAGCTGCCGTTGTCGCCCTTCTT------------------------GGCGCTGCTGGTGCTGGCCC
CGGAGGCGGCGTTGGCGGCGGCGGCGTCGCGTTCGGTGACGGGGAGGACGAAGGAGAGGTTGCCG
>chr7A_451
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--------------------------------------------------TTTTTTTGTGTGTGAGAAAATATCATTCAT
TCATTTCCAGTTCTTGTCACTGCACAACCCCAGGTACGTCCATTTGTTCGTGCCTAAGTTGATCTCGTTAACTCTGCAGC
TTACATGCACAAAAAGAATCACATCTAGCGGTCGAACAAACTGAATTCACGAATCACGAGGAGGAAGTTTCTTCTTTGCA
TAGTTTCCGGCTGAGGGTGCTGAAGTTGGCTCGCGAGAACTGGCGGGACGCGTTCCTCCAGTCCGCCCCGGACTTCATCA
TCAGCTCGAACTCCTGGTAGCTGATGCGTCCGTCCCGGTCGGTGTCGACGTCGCGGATGATCTCGAGGATGGCCTGCTCG
TTGGGTCCCAGCTCCTGCCGGAGCTCGTCGATCTCGATGAAGCCGCTGCCGTCCTTGTCGAAGTAGCGGAACGCCGCCGC
CAGGTACTTCTCGTTGGTCATCTTCTTGAGGTGCAGCGACACCGTGACGAACTCGTCGCAGTCCAGCGTCCCGTTGCCGT
CCGTGTCCGCGGCCTCGAGCAGCATCCTGATCTCCGACTCCGGCACGCGCTGGCCGTTGATGTGGAGGCCCTCCACGAGC
TCCTCCAGCGACAGGTTGCCGTTCTTGTCCTTGTCCATGAGATGGAACATCTGCACGTACTTGTCCAGCTCCTCCACCGG
CATGTTCCGCGCCACCACGCCCAGCGCCTTCTTCTTGAACTTGTTCATCGCCGAGAACTGCTGCAGCCGAGACCGCACCG
CCTCGCCCAGCGACACGTTCGGCGCCGTCTCCGCGTTCTTCAGCCACGGGTGCTCTGCCAATCACAAACACAAT------
GCCTGCGTTAGTTCTACGTCCATCCACACCACGTGCTAATC------AGTAGAAGTGCAATGGTGCGGTACCAAGAACTT
GCGCGGCCGTGAGCCGGGCGGCGGGGTCGGGGTCGAGCATCCCCCTGATGAGGTCCTTGGCGTTGCCGGACACCCTGGGC
CAAGGCTCCCGGTTGAAGTCGAGGCCGCCGCGGATGATGGCCTGCGCGATCTTCTCGTCGTTGTCCCCCCAGAAGGGCGG
CACACCGCAGAGGAGGATGTAGAGGATGACGCCGGCGCTCCACACGTCCACCTCCTGCCCGTAGTTGCGCTTGAGGACCT
CGGGGGCCATGTAGTAGGCGCTCCCCACCACCTCCGTGAAGCGATCGCCGGGGTTGAAGAACACCGAGAGGCCGAAGTCG
ATCACCTTGAGGGGGGCGTCCTCGGATTTGTTGGCGAACAGGAAGTTCTCCGGCTTGAGATCACGGTGGATCACCCCGTT
CGAATGGCACAACTGCGTTCGAATGGAAAC--------TTAGTTCGTCGCCTTCGTTGCGAGATTGGTGCGCAAGAACGT
TGATCGAGAAGCGTGTTGAGGTGTTCTTGAACGAATCTTGCATGCGGGTTGCGTACCTGGATGACGTTGACGATGGTGCG
GAAGATCTTGGCAGCGGCTCGCTCGGAGTAGTGGCCGCGGGCGACGATGCGGTCGAAGAGCTCGCCGCCCTCGCAGAGCT
CCATGACGAGGTGCACGGAGCCTTCCTGGTCCTCGCGGGCCTCTCGCAGCCGCACAACGGCCGAGCCACCGCGGGCTGAC
ATGCGCCGCATGATGGCCACCTCCCGCCGCACGTCGGCCGCGTGCGCCGCCGCGGCG---GCGGCGGCGGCTCTCGCGGC
GGCCTCCGCGCCCCCGCCACCCGCGGCCTTGCGGTTCGCCCCGCGGCCGCCCCGGCGGCGGTGCCTCCGGATGGTCTTGC
ACGCGAGCGCCTCGCCCGTGGCGGCGTCCTTGCAGCGGCGCGTCACCCCGAACTCCCCGCGGCCGAGCTCCTTCCCCAGC
ACGTAGCGCCGCCCGAACTCCGCGGACGTCATCTTGGCCACGAGCTCCTCCTCCTCGGTGCCGCCGGCGGGGCCGTCGCC
ATTGTTGCGCCTGGAGCTGCCGTGGTCGCTCTTCTTGGAGGAGCGGTCCGAGCCCGCGCGGGCGCTGCTGGTGCTGGCCC
CGGAGGCGGCG---------GCGGCGTCGCGTTCGGTGACGGGGAGGACGAAGGAGAGGTTGCCG
>SNPs
-S-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------
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-----------------------------S--------------------------------------------------
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-------S------------------------------------------------------------------------
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---S-------------------------------------S------------------S-------------------
-----------------------------------S--------------------------------------------
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-------------------------------S--S-S----------S-------------S------------------
S-----------S-------------------------------------------------------------------
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-------------------------------------------S-------------------S---S------------
--------------------------------------------------------SSSS--------------------
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----------------------------S-----S---S-----S-----------------------------------
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>forward_52
--------------------------------CGCTTACGATGAGTTGCACG----------------------------
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>reverse_1822
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-------------------------------------------------------------TATTGGTGCGCAAGAACGT
C-------------------------------------------------------------------------------
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