>input_sequence_77569
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATGGCGTTCAATAGAGCAC
AA---TTGCTTGTTGCCTTCGTTCTGGGTTTGCTCCTCATGTGCCACGGTAAGTTCAGATACTATCGTAAGATCATATAT
----------------------------TAACTCCAATTTATACATATACATACATATATATCATAAGCTCATGGGTTAC
ACATTTTTATGAAATTTATATATGTGTGTGCATTTGGCAAATTGATCATAGTGGTATCATGCAAGTACATGTATTAATTA
AAGTTCTGGGTGTTAAACTCTCTGATGCAGGTGCGGAGGCTTTCCATCAGCTTTTCTCCTCCATGAACAAGGATTACAAC
CACGGATGCATGGACTGGAAGGAATGCATGAAGAGTTGCCAAAAGGGGGGGTTCGACGGCGGATTCTGCATACTCTCCAA
ATGCACCTGCTTCAAAAAGGGTATGCATGCACCACCACCACAACACAATGCGCCGGAGTTGGCGCCATCCGAAGGGCCAT
CGGAGGCAAAAGCCATGTTCGCAAGGAATGTTTACATGGGTACGGGTAATTGA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr3D_1_TraesCS3D01G443700
AATGTTTTTATGTGATTCTATATCAGGACATGTGATTAAAAATCTTGTTCGTATTGCATTTACAGTTAGAAAAATTTATT
GTTGTGGTCCAAGTAGTAATGTGGGTTCACTGAAGCATTGTTAAGATGATGTATCTGTTATAGTAAGGCTCCATTAGACG
AATGATCAGATGGTGTTACATA----CAATTATAAAGATAATATTAATGCTGAACAGATTATATGGTTTTGAGTATCTAT
TGATTGTGCGGGCTGTTGATATAGTAATGCTTTACTAGATCAATGAATGCATGATGTTAGGTATTGTACCACTTTCTTTA
TATTAACACAAAATGTTCCGATTATCATTAAATATTCACTTGGTTCAAAAACACAAGTTGCCTATATGGCATTGGAAAAG
TAGATCTATACACCAGCAGTCAAATGCGAAATAGAAACACAAGTATTTGTAGTATTAAAGCACTTGCATTTATACACAAG
ATATAAATACA---TGTATATCTGACATTTTTATGCTGCGTATTTGTTAGTATTAAACCACTTGCATTTATACATGAGAT
AGAATTACATGTATATCTGACATTTTGATATCATGTATTTGTTGTATCTAAAATGCTTGCATTTGTACACGGGATAGAAA
TACCAACATGTCCAACATTTTGATACCATGTATTTGTAGTATTAAAGCTCTTTCATTTATAAACGAGAAACAAATATATG
TATATCTGACATTTTGATATCACGTATT-GCAGTATTAAAGCACTTGAATTTATAGTGGAAATGGAAATATATGTATATC
CAACATTTTGTTATCACATATTTGAAGTATTAAAGAACTTGCATTTA----T----GAGACACGAATACTCTTATATCTG
TCATTTAGATTCCTCA--T-GATTCATCTCATACATTCAATGGAATCTCGAATGAACATCTCTATAAATAGCA--CAGAC
CGTTTCACATCAATCCTGAAGAACCACAAGCAAAGCAAAGAAAAGTTTAATCGTCTTGGCCATGGCGTTCAATAGAGCAC
AA---TTGCTTGTTGCCTTCGTTCTGGGTTTGCTCCTCATGTGCCACGGTAAGTTCAGATACTATCGTAAGATCATATAT
----------------------------TAACTCCAATTTATACATATACATACATATATATCATAAGCTCATGGGTTAC
ACATTTTTATGAAATTTATATATGTGTGTGCATTTGGCAAATTGATCATAGTGGTATCATGCAAGTACATGTATTAATTA
AAGTTCTGGGTGTTAAACTCTCTGATGCAGGTGCGGAGGCTTTCCATCAGCTTTTCTCCTCCATGAACAAGGATTACAAC
CACGGATGCATGGACTGGAAGGAATGCATGAAGAGTTGCCAAAAGGGGGGGTTCGACGGCGGATTCTGCATACTCTCCAA
ATGCACCTGCTTCAAAAAGGGTATGCATGCACCACCACCACAACACAATGCGCCGGAGTTGGCGCCATCCGAAGGGCCAT
CGGAGGCAAAAGCCATGTTCGCAAGGAATGTTTACATGGGTACGGGTAATTGATTCGGTGGCTAATTTTCGCGACTCTAT
AAAAATGTTATGTGTGTAAGCAACTAAGCACGAATAATTGATCGCCTGAAAATATGCAGAATTGGAGTAACGAAAGAAAT
GACAAGAAAGAAGACTCTTCAATCTGAGACCGTGCTTAAGTGAGTTATGGTCGGTTTTATCAAATCTGCCATGTTGTCAT
GGCTTTTTACATCATCAGTGTTTTGGTTATCTCTATTACATTTACATGGATTGGGATCCCATGCTTCACTAATTGGTAGG
AAACTAGCCCAACAAACTCATGCACATAATCCAACAATAAACACTGTAACATCGCAATTTTTAGAATGTTTAAAAATTAT
TTTCTAAAAAGCAAGGCCAAAAAA-TGTGTTTGTTTTATTTGGTTAAGAAAAGCTTAAATTGAGTTTTCATACATTTGTA
GGATTTAGTTTGAATTAAAGTTAACCCAAATTAAATTTTTAATTG-TTCTGTACAT----TTTTAGTTGGGTTTTATCCT
TCTCGTTTTTGACATATTAAAGTATGCTACTCAGAATTTTCTTTGGATTTTT-TTGAACTTCATTTGATTTTATATTTGA
GTCTTTATTCACTCTCTAGATTTATGTAAAAAGAAATTCATTTCTATTTCCTTCTCTCTTCCCTGGGCGCAACCCACATT
ATTTTGTCTTGTTCGAAACCAAATGGGCCTAGCCCAATCTGCATTTCTGTCTTACCAACCTCTCTCGCAGGTCAACTACC
CCCTTCTATATTTTTTCCTACTTTCCCTTCCTTCCTCATGGGTCTGGCTGAATTGCCTGGCACCCAGGCAAACGCCTCTT
TTCCTTACTCTTCATCTTCCTTTGTACTAGTAATCGTGCACATGCAATGCACGTCTTGACTAATATTACAAACATACGTG
AGAATTAACATGCATAGAAAGATATTTTGATTGCACTTAAAGGCTATCAATTAATATGCATATCTAATATTACAAACATA
CATGCGAGATTATATATGTG
>chr3B_5
----TTTTTTTGTGATTCTATATCAGGACATGTGATTAAAACTCTTGTTCATATTGCATTTACAGTTAGAAAAATCTATT
GCTGTGGTTCAAGTAGTAACGTGGGTTCACTGCAGCACTGTTAAGATGATGTATCTATTGTATTAAGGCTCCATTAGATG
ACTGATCAGATGGTGTTACATATATACAATTATAAGGGTAATATTAATGCTGAACAGATTATATGGTTTTGAGTATCTAT
TGATTGTGGGGGCCATTGATATAGTAATGCTTTACTAGATCAATGAACACATGATGTTAGGTATTGTACCGCTTTCTTTA
TATTAACACAAAATGTTCAAATTATCATGAAATATTCACTTGGTTTAAAAACACAAGTTGCCTATATGGCATTGGAAAAG
TAGATCTACACATTAACAGTCAAATGCGAAATAGAAACACAAGTATTTGTAGTATTAAAGCACTTGCATTTATACACAAG
A----AATACA---TGTATATCTGACATTTTTATGCTGCGTATTTGTTAGTATTAAACCACTTGCATTTATACATGAGAT
AGAATTACATGTACATCTGACATTTTGATATCATGTATTTATTGTA-CTAAAATGCTTGCATTTGTACACGGGGTAGAAA
TACCAACATGTCCAACATTTTGATACAATGTATTTGTAGTATTAAAGCGCTTTCATTTGTAAACGAGACACAAATATATG
TATATCTGACATTTTGATATCACGTATT-GCAGTATTAAAGCACTTGAATTTATAGTCGAAATAAAAATATATGTATATC
CAACATTTTGTTATCACATATTTGAAGTATTAAAGCACTTGCATTTA----T----GAGATAAGAATACTCTTATATCTA
TCATTTAGATTCCTCA--TTGATTCATCTCATACATTCAATGGAAGCTCAAATGAACATCTCTATAAATAGCA--CAGAT
TGGTTCACATCAATCCCGACGAACCGCAAGCAAAGCAAGGAAAAGTTTGATCGTCTTGGCCATGGCATTCAATAGAGCAC
AA---TTGCTTGTTGCCTTCGTTCTGGGTTTGCTCCTCATGTGCCACGGTAAGTTTAGATACTATCGTAAGATCATATAT
----------------------------TAAGTCCAATTTATACATATACGTACATAT----TGTAAGCTCATGGGTTAC
ACATTTTTATGAAATTTATATATGTGTGCGCATTTGGCAAATTGATCATAGTGGTATCATGCAAGTACATATATTAATTA
AAGTTCTGGGTGTTAAACTCTCTGGTGCAGGTGCGGAGGCTTTCCATCAGCTTTTCTCCTCCATGAACAAGGATTACAAC
CACGGATGCATGGACTGGAAGGAATGCATGAAGAGTTGCCAAAAGGGGGGGTTCGACGGCGGATTCTGCATACTCTCCAA
ATGCACCTGCTTCAAAAAGGGTATGCATGCACCACCACCACAACACAATGCGCCAGAGTTGGCGCCATCTGAAGGGCCAT
CGCAGGCAAAAGCCATGTTTGCAAGGAAAGTTTACATGGGTATGGATAACTGATTCGGTGGCTAATTTTCGCGACTCTAT
AAAAATGTTATGTGTGTAAGCAACTAAGCATGAATAATTGATCGCATGAAAATATGCTGAATTGGAGTAACGAAAGAAAT
GACAAGAAAGAAGACTCTTCAATCTGATACCGTGCTTAAGTGAAAAAAATGTGTATAAGCAACTAAGCATGAATAATTGA
TCGCATGAAAATATGTTGAATT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGCCAAAAAA-TGTGTTTGCTTTATTTGGTTAAGAAAAGCTTAAATTGAGTTTTCATACATTTGTA
GGATTTAGTTTGAATTAAACTTAACCTAAATTAAGTTTTTTTATTTTTTTGTACAT----TTTTAGTTGGGTTTTATCTT
TCTCGTTTTTGACATATTAAAGTATGCTACTTAGAATTTTCTTTGGATTT-T-TTGAACTTCATTTGATTTTATATTTGA
TTCTTTATTCACTCTCTAGATTTATGTAAAAAGAAATTCATTTCTATTTCCTCCTCTCTTCCCTAGGCACAACCCACATT
TTTTTGTCTCGTTCCAAACCAAATGGGCCTAGCCCAATCTGCATCTCTGTCTTACCAACCTCTCTCGCAGCCCAACTACC
CCCTTCTATATTTTTTCCTACTTTCCCTTCCTTCCTCATGTGTCTGGCTGAATTGCCTGGCACCCAGGCAAACGTCTCTT
TTCCTTACTCTTCAACTTCCTCTGTACTAGTAATCATGCACATGCAATGCACGTCTTGACTAGTATTACAAACATACGTG
AGAATTAACGTGCATAGAAAGATATTTTGATTGCACTTAAAGGTTATCAATTAATATGCATATCTAATATTACAAACATA
CATGCGAGATTATATATGTG
>chrUn_240
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTGTGCGGGCTATTGATATAGTAATGCTTTACTAGATCAATGAATGCATGATGTTAGGTATTGTACCACTTTCTTTA
TATTAACACAAAATGTTCCGATTATCATTAAATATTCACTTGGTTCAAAAACACAAGTTGCCTATATGGCATTGGAAAAG
TAGATCTATACACCAGCAGTCAAATGCGAAATAGAAACACAAGTATTTGTAGTATTAAAGCACTTGCATTTATACACAAG
ATATAAATACA---TGTATATCTGACATTTTTATGCTGCGTATTTGTTAGTATTAAACCACTTGCATTTATACATGAGAT
AGAATTACATGTATATCTGACATTTTGATATCATGTATTTGTTGTATCTAAAATGCTTGCATTTGTACATGGGATAGAAA
TACCAACATGTCCAACATTTTGATACCATGTATTTGTAGTATTAAAGCTCTTTCATTTATAAACGAGACACAAATATATG
TATATCTGACATTTTGATATCACGTATT-GCAGTATTAAAGCACTTGAATTTATAGTGGAAATGGAAATATATGTATATC
CAACATTTTGTTATCACATATTTGAAGTATTAAAGAACTTGCATTTA----T----GAGACACGAATACTCTTATATCTG
TCATTTAGATTCCTCA--T-GATTCATCTCATACATTCAATGGAATCTCAAATGAACATCTCTATAAATAGCA--CAGAC
CGTTTCACATCAATCCTGAAGAACCACAAGCAAAGCAAAGAAAAGTTTAATCGTCTTGGCCATGGCGTTCAATAGAGCAC
AA---TTTCTTGTTGCCTTCGTTCTGGGTTTGCTCCTCATGTGCCACGGTAAGTTCAGATACTATCGTAAGATCATATAT
----------------------------TAACTCCAATTTATACATATACGTACATATATATCATAAGCTCATGGGTTAC
ACATTTTTATGAAATTTATATATGTGTGTGCATTTGGCAAATTGATCATAGTGGTATCATGCAAGTACATGTATTAATTA
AAGTTCTGGGTGTTAAACTCTCTGATGCAGGTGCGGAGGCTTTCCATCAGCTTTTCTCCTCCATGAACAAGGATTACAAC
CACGGATGCATGGACTGGAAGGAATGCATGAAGAGTTGCCAAAAGGGGCGGTTCGACGGCGGATTCTGCATACTCTCCAA
ATGCACCTGCTTCAAAAAGGGTATGCATGCACCACCACCACAACACAATGTGCCGGAGTTGGCGCCATCCGAAGGGCCAT
CGGAGGCAAAAGCCATGTTCGCAAGGAAAGTTTACATGGGTACGGGTAATTGATTCGGTGGCTAATTTTCGCGACTCTAT
AAAAATGTTATGTGTGTAAGCAACTAAGCACGAATAATTGATCGCCTGAAAATATGCAGAATTGGAGTAACGAAAGAAAT
GACAAGAAAGAAGACTCTTCAATCTGAGACCGTGCTTAAGTGAGTTATGGTCGGTTTTATCAAATCTGCCATGTTGTCAT
GGCTTTTTACATCATCAGTGTTTTGGTTATCTCTGTTACATTTACATGGATTGGGATCCCATGCTTCACTAATTGGTAGG
AAACTAGCCCAACAAACTCATGCACATAATCCAACAATAAACACTGTAACATCGCAATTTTTAGAATGTTTAAAAATTAT
TTTCTAAAAAGCAAGGCCAAAAAA-TGTGTTTGTTTTATTTGGTTAAGAAAAGCTTAAATTGAGTTTTCATACATTTGTA
GGATTTAGTTTGACTTAAAGTTAACCCAAATTAAGTTTTTAATTG-TTTTGTACAT----TTTTAGTTGGGTTTTATCTT
TCTCGTTTTTGACATATTAAAGTATGCTACTCAGAATTTTCTTTGGATTT-TTTTGAACTTCATTTGATTTTA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr3A_406
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ACATCCGCGGTCAAACACGAGATAGAAATGCATGTATTTGCGGTATTAAAGCACATACTTTTATATACGAG
ATATAAATACATGTTATATATCTTACATTCTAATATCAAATATTTGC-AGTATTAGAGCACTTGCATTTATACACGAGAT
ACGAATACATGTATATCTGGCATTTTGATATCATGTATTTGTAGTG-TTAAAGCACTTGCATTTATAAG----------A
TACCAGTATATCCAACACTTTGATATCATGTATTTGCAGTATTAAAGCACTTGCATTTATACACAAGATAGAAATACATG
TATATCTGACATTTTGATATCACGTATTTGCAGTATTACAGCACTTGCATTTATACATGAGATAAAAATACATGTATATC
CAACACTTTGATATCACGTATTTGTAGTATTAAATCACTTGCATTTA----TACAAGAGATAGAAATACATGTATAT-TG
ACAGTTGTATTCCCACATC-GACCCATCTTGGACAGTCAATGCAAGATCAAACGAACATCTATTTAAAGAGCAAGCACAT
CGGTTACCATCAATCC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr3D_436
TTGCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TTTATACACGAGAT
ATAAATACATGTATATCTGGCATTTTGATATCATGTATTTGTAGTG-TTAAAGCACTTGCATTTATAAG----------A
TACCAGTATATCCAACACTTTGATATCATGTATTTGCAATATTAAAGCACTTGCATTTATACACAAGATAGAAATGCATG
TATATCTGACATTTTGATATCACGTATTTGCAGTATTAAAACACTTTCATTTATACATGAGATAAAAATACATGTATATC
CAACACTTTGATATCACGTATTTGTAGTATTAAAGCACTTGCATTTA----TACAAGAGATAGAAATACATGTATATCTG
ACATTTGTATTCCCACATC-GACCCATCTTGGACATTCAATGCAAGATCAAACGAACATCTATATAAAGAGCAAGCACAT
CGGTTACCATCAATCCCATCAAAGCACTAATAAAG-----AAAAGATTAATCGTCTTAGCTATGGCGTTCAATAGAGCAC
AACTGTTGCTTGCTGCCTTCACTCTGGGTTTGCTCCTCGTGTCCCACAGTAAGTTCAAATACTATCGTAAGCTCAGCTAA
AAAAAATACTATTGTAAGCTCATCTCACTAGCTCCAATCT----------ATACATAT----CATAAGCTCATGGC-TAC
ACAATTATATGAAGTTTCTATCAGTGTAAACATTTGGCCGATTGACCATGGTGGTATCATGCAATTACATATAGTAAT-A
AATTCTTGGGTGTTAAATTTTGT-ATGCAGGTGCAGAGGCTTACCATGGGTTTTGTCACTCCATTAGCAAGACTTACAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr3A_815
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TGAAGTATTAATGCACTTGCATTTAATTAT----GAGACATGAATACATTTATATCTG
TCATTTGGATTCC-ACATT-GATTCATCTCATACATTCAATGGAAACTGA-------------ATAAATAGCA--CAGAT
CGGTTCACATCAATCCCAACAAACCACAAGCAAAGCAGAGCAAAGTTTAATCGTCTTGGCCATGGCGTTCAACCGAGCAC
AA---TTGCTTGTTGCCTTCGCTCTGGGTTTGCTCCTCATGTCCCACGGTAAGTTCAGATACTATCGTAAGATCATATGT
----------------------------TAACTCCAATTTATGCATATACATACATAT----CGTAAGCTCATGGATTAC
ACGTTTTTATGAAATTTATATGTGTGTGTGCATTTGGAAAATTGATCATAGTGATATCGTGCAAGTACATATATTAATTA
AAGTTTTGGGTGCTAAACTCTCTGGTGCAGGTGCCGAGGCTTTCCATCAGCTTTCCCCCTCCATGAACAAGGATTACAAC
CACGGATGCATGGACTGGAAGGAATGCATGAAGAGTTGCCAAAAGGGGGCCTTCGACGGCGGATTCTGCGTACTCTCCAA
ATGCATGTGCTTCAAAAAGGGTACGCATGCTCCACCGCCACAACACAATGCACCGGAGTTGGCGCCATCCGAAGGGCCAT
CGCAGACAAATTTCATGTTCGCAAGGAAAGTCTACATGGGCATGCGTAATTGATTCGGTGGCTAATTTTCACGACTCTCT
AAAAATGTTCTATGTGTAAGCAACTAAGCATGAATAATTGATCGCATGAAAAT-TGCTGAATTGAAGTACCGAAAGAAAT
GACAAGAAAGAAAACTCTTCAATCTGAGACCCTGCTTAAGTAAGTTATGGTCGGTTTTACCAAATCTACTATGTTGTCAT
GGCTTTTTACGTCATCAGTATTTTGGTTATCTCTATTACATTTACATGGATTGGGATCCCGAGCTTCACTAATTGGTAGG
AAACTAGCCAAACAAACTCATGCATGAAATCCAACAATAAACATTGTAACATCGCAATGTTCAGAATAATTAAAAATTAA
TTTCTAAAAGGCAAGGCCAAAAAAATGTGTTTACTTTATCTGGTTAAGAAAAACTTAAATTGAGTTTTCATACATTTTTA
GGATTTAATTTGAATTAATGTCAACCTAAATTAAGTTTTTTTTTA-TTTTTATACATTTCTTTTAGTTGGGTTTTATCTT
TCTCATTTTTGATATATTAAAGTATGGTACTCAAAATTTTCTTTGGATTT-T-TTGAACTTCATTCGATTTTATATTTGA
GTCTTTATTCACTGTCTGGATTTATGTAAAAAGAAATTCATTTCTATTTCCTTCTCTCTTCCCTGGGCGCAACCCACATT
TTTTTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chrUn_1476
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAAAGCCATGTTCGCAAGGAAAGTTTACATGGGTACGGGTAATTGATTCGGTGGCTAATTTTCGCGACTCTAT
AAAAATGTTATGTGTGTAAGCAACTAAGCACGAATAATTGATCGCCTGAAAATATGCAGAATTGGAGTAACGAAAGAAAT
GACAAGAAAGAAGACTCTTCAATCTGAGACCGTGCTTAAGTGAGTTATGGTCGGTTTTATCAAATCTGCCATGTTGTCAT
GGCTTTTTACATCATCAGTGTTTTGGTTATCTCTGTTACATTTACATGGATTGGGATCCCATGCTTCACTAATTGGTAGG
AAACTAGCCCAACAAACTCATGCACATAATCCAACAATAAACACTGTAACATCGCAATTTTTAGAATGTTTAAAAATTAT
TTTCTAAAAAGCAAGGCCAAAAAA-TGTGTTTGTTTTATTTGGTTAAGAAAAGCTTAAATTGAGTTTTCATACATTTGTA
GGATTTAGTTTGACTTAAAGTTAACCCAAATTAAGTTTTTAATTG-TTTTGTACAT----TTTTAGTTGGGTTTTATCTT
TCTCGTTTTTGACATATTAAAGTATGCTACTCAGAATTTTCTTTGGATTT-TTTTGAACTTCATTTGATTTTATATTTGA
GTCTTTATTCACTCTCTAGATTTATGTAAAAAGAAATTCATTTCTATTTCCTTCTCTCTTCCCTGGGCGCAACCCACATT
ATTTTGTCTTGTTCGAAACCAAATGGGCCTAGCCCAATCTGCATTTCTGTCTTACCAACCTCTCTCGCAGGTCAACTACC
CCCTTCTATATTTTTTCCTACTTTCCCTTCCTTCCTCATGGGTCTGGCTGAATTGCCTGGCACCCAGGCAAACGCCTCTT
TTCCTTACTCTTCATCTTCCTCTGTACTAGTAATCGTGCACATGCAATGCACGTCTTGACTAATATTACAAACATACGTG
AGAATTAACATGCATAGAATGATATTTTGATTGCACTTAAAGGTTATCAATTAATATGCATATCTAATATTACAAACATA
CATGCGAGATTATATATGTG
>chrUn_1476
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAAAGCCATGTTCGCAAGGAAAGTTTACATGGGTACGGGTAATTGATTCGGTGGCTAATTTTCGCGACTCTAT
AAAAATGTTATGTGTGTAAGCAACTAAGCACGAATAATTGATCGCCTGAAAATATGCAGAATTGGAGTAACGAAAGAAAT
GACAAGAAAGAAGACTCTTCAATCTGAGACCGTGCTTAAGTGAGTTATGGTCGGTTTTATCAAATCTGCCATGTTGTCAT
GGCTTTTTACATCATCAGTGTTTTGGTTATCTCTGTTACATTTACATGGATTGGGATCCCATGCTTCACTAATTGGTAGG
AAACTAGCCCAACAAACTCATGCACATAATCCAACAATAAACACTGTAACATCGCAATTTTTAGAATGTTTAAAAATTAT
TTTCTAAAAAGCAAGGCCAAAAAA-TGTGTTTGTTTTATTTGGTTAAGAAAAGCTTAAATTGAGTTTTCATACATTTGTA
GGATTTAGTTTGACTTAAAGTTAACCCAAATTAAGTTTTTAATTG-TTTTGTACAT----TTTTAGTTGGGTTTTATCTT
TCTCGTTTTTGACATATTAAAGTATGCTACTCAGAATTTTCTTTGGATTT-TTTTGAACTTCATTTGATTTTAAATTTGA
GTCTTTATTCACTCTCTAGATTTATGTAAAAAGAAATTCATTTCTATTTCCTTCTCTCTTCCCTGGGCACAACCCACATT
A----------TTCGAAACCAAATGGGCCTAGCCCAATCTGCATTTCTGTCTTACCAACCTCTCTCGCAGGTCAACTAC-
CCCTTCTATATTTTTTCCTACTTTCCCTTCCTTCCTCATGGGTCTGGCTGAATTGCCTGGCACCCAGGCAAACGCCTCTT
TTCCTTACTCTTCATCTTCCTCTGTACTAGTAATCGTGCACATGCAATGCACGTCTTGACTAATATTACAAACATACGTG
AGAATTAACATGCATAGAATGATATTTTGATTGCACTTAAAGGTTATCAATTAATATGCATATCTAATATTACAAACATA
CATGCGAGATTATATATGTG
>SNPs
SSSS-----S-------------------------------S--------S------------------------S----
-S------S----------S------------S----S------------------S--S--S---------------S-
-S---------------------------------S-S------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S-------------S-----------------------------S-
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------
>forward_255
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TCTAT
TGATTGTGCGGGCTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>reverse_1549
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TGTTTACATGGGTACGGGTAAT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>forward_930
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TCATCTCATACATTCAATGGAATCTCG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>reverse_2422
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TTGTACTAGTAATCGTGCACATGC-----------------------------------
--------------------------------------------------------------------------------
--------------------
