>input_sequence_77531
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---------------------------------------------------ATGAAGTGGTTCAACATGAGCTCGTCCAT
GTACAGGTCGCCGGTGTTCATCGGCCTCCTGGTGGTGATGTCCGTGGCCTTGGTGCTCCTTCTGCACCACTGCATCCTCG
TCAGCTGCTGCAACGGCGAGAGGGTCCGCGGGCGCAGCCGCCGGCGAGGTGCCACGGCGCGGCAGCAAGAACAGCAGCCG
GAAGAGAGCGTGGGCGACCTGAGCTCGTCGTCGCGGGTGCAGCTGGTGGCGAAGCCGGTGGTGTGCCGGTACCGGAAGGA
CGAGGAGTGGAGCGAGCCGACGTGCCCGGTGTGCCTTGCGGACTTCGCGGACGGCGAGGCGGTGAGGGTGCTGCCGGAGT
GCCTGCACTACTTCCACGCGGACTGCATCGACACCTGGCTCCGCGCCCGCAACACCAGCTGCCCGATGTGCCGCGCCGAG
ACCACGCCCACGCCGTCGCCCAGCCCCGCCGGGTCACTCCACCACCAGCTCTCCCTCGACATCTCCCTCGAGGACATCCT
AATCCGCACGTAG-------------------------------------------------------------------
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>chr4B_1_TraesCS4B01G143100
GCCATCCCCGACCCGAACGACGCCGCCAGCCGCCTCGACGGGGGCGGCGAGGGGCTCGTCACCCTGTCGTTCCCCTCCGG
CACGTGGTCCGGTCGCGTCGTGGCGCGCACCGGCTGCAGCAGCAGCGATGACTACGACTCCCCCTCCCCCTCCTCCTCCT
CGCCGGCGGCGGTGACCAGGTGCGACACGGGCGTGCCGCCGGCGCCGGTGACGGTGGCGCAGGTGAGCGTGCACGGGTCC
GGCGGGCTGGCGGAGTACAGCGTGAGCCTGGTGGACGGGTTCAACCTGCCCGTGATGGTGACGCCGCACGGGTTCGAGCA
GGGCCGGCAGTGCCCGTCCCTCGGCTGCGCGGTGGACCTGGACGTGGACTGTCCCCGCGACGCCAGGGCCCCCGCCGGCG
GGTGCAGGGCCCAGGGCCAGGGGCACTTCTTCAAGGAGAGGTGCCCGGACACTCGGACGACGCCGACGGACGTGGAGGCC
ACGCCGCAGCGCTGCATCCAGCCCGGCGAGCTCAAGATCGTCTTCTGCCCGGATTCTTCCTACTAGTCACTTGCTACCA-
--CACAC--TAGGCTAGCTAGACCGGCTCTGTGTCACTCACGATGCCGGCTATATAATAAGCTTAGCGATTGATTGCTGA
TTCGCTAAGCCAGATTCAACCGAATAATATGTTAACTATTCATCTTCCGCTTGGACTGATCTTGAGCACTTGACCCAGTC
TGATTGATCTCGCCATGTTTAGCAACAAAAAAACAAAGAAAATAAACAGTAGCAGGCTTAGTTTGTGTTGTTTCTACTAG
CTTCCAAGCACAAGGGAACAGATGCAGGTCGCCATCAGTGGCATCAGCGACGCGCATCGACTATCGACGATGC---AGCT
TCGTAACCATCGTCGCTCTCGGGTTGTCCGGTAGCTTGCATCTATCGACCGATTAATGTTCCATCCATGGCTCATTCCAC
CTCGATCGGAGCTTCCTAGCCTAGGTAGTAC---GTAGGTACACACATCACATGAAGTGGTTCAACATGAGCTCGTCCAT
GTACAGGTCGCCGGTGTTCATCGGCCTCCTGGTGGTGATGTCCGTGGCCTTGGTGCTCCTTCTGCACCACTGCATCCTCG
TCAGCTGCTGCAACGGCGAGAGGGTCCGCGGGCGCAGCCGCCGGCGAGGTGCCACGGCGCGGCAGCAAGAACAGCAGCCG
GAAGAGAGCGTGGGCGACCTGAGCTCGTCGTCGCGGGTGCAGCTGGTGGCGAAGCCGGTGGTGTGCCGGTACCGGAAGGA
CGAGGAGTGGAGCGAGCCGACGTGCCCGGTGTGCCTTGCGGACTTCGCGGACGGCGAGGCGGTGAGGGTGCTGCCGGAGT
GCCTGCACTACTTCCACGCGGACTGCATCGACACCTGGCTCCGCGCCCGCAACACCAGCTGCCCGATGTGCCGCGCCGAG
ACCACGCCCACGCCGTCGCCCAGCCCCGCCGGGTCACTCCACCACCAGCTCTCCCTCGACATCTCCCTCGAGGACATCCT
AATCCGCACGTAGAGATGGACGGCCGGCGGTGAACAGGAGGAAGAAGCAGAGTGTATGTGGATGTACTACATTGCTCTGT
TTTGCTTCTAAATTCTAATCCGCTCGTAGAGATGGGCGGCCGGCGGTGAACAGGAGGAAGAAGAGGTAGTGATCGATTCT
TTTGTTAGAATTCGTTGAAGAAATATTGATAGTGTTGTGTGATTGGCACTAACTCTTTATTCGCTCTTAATTAAGAGTAA
TTCTGATATTTGAGAAGTTAATCTGCATATGAGATATTCTTCA--TCCCCCCATGTGAACTCTCATTCTATGCTCATCTG
ATAGTAGTCACTTGGCTGATAGAAAATCAGCTCATGATGTTGACAAGCTTATTAGAGACAATGGAAGAGTTATGTAAAGC
TGCATTTTCTATGGAACATAATAGCCCCTTTTTTTGCCGGTGGAACATAATAGCCTGATATTTGAGAAGTTAATCTGCAT
ATGAGGTATTCTTCATCCCCCCATGTGAACTCTCATTCTATGCTCATCTGATAGTAGTCACTTGGCTGATAGAAAATCAG
CTCATGATGTTGACAAGCTTATTAGAGACAATGGAAGAGTTATGTAAAGCTGCATTTTCTATGGAACATAATAGCCCTTT
TTTTTGCCGGTGGAACATAATAGCCTGATGGTTTCTCATAGAGTTTTACCAGAAAATCTAGAGTTTGATAAAATGGATGC
TTGATGATTTCCATAGAGATAATATCAACATTGTTAGGCT-AATGATGACATTATTACTTTACGGAAATGTTAACGCCCA
CACGTGTGGGCGTTCACCACTCCGTCCACACGCAAGCATCGCCGTTGGTTTCGTTTTGCACGAATCTTGGAGCAAAAGGG
CTGGTTTTCGGCGCCACGTTGGACGATTCTAGTGTGCGGTGTGCGAGTGGGTTCACCCGCACGGTAGTTGCCATCCCGCG
GTCAGCGGTTGCCACTGAGAGGCGTGCGGTGGAACTGCCATGCGCCCGCACGCCAC
>chr4A_1
GCCATCCCCGACCTGGACGACGCCGCCAGCCGCCTCGACGGGGGCGGAGAGGGGCTCGTCACCCTGGCGTTCCCTTCCGG
CGCGTGGTCCGGCCGCGTCGTGGCGCGCACCGGCTGCAGCAGCAGCGATGACTACGACTCCTCCTCCCCCTCCTCCTCCT
CGACGGCGGCGGTGGCCAGGTGCGTCACGGGCATGCCGCCGGCGCCGGTGACGGTGGCGCAGGTGAGCGTGCACGGGTCC
GGCGGGCTGGCGGAGTACAGCGTGAGCCTGGTGGACGGGTTCAACCTGCCGGTGATGGTGACGCCGCACGGGTTCGAGCA
GGGCCGGCAGTGCCCGTCCCTCGGCTGCGCCGTGGACCTCGACGTGGACTGCCCCCGCGACGCCAGGGCCCCCGCCGGCG
GGTGCAGGGCCCAGGGTCAGGGGCACTTCTTCAAGGAGAGGTGCCCGGACACTCGGACGACGCCGACGGACGTGGAGGCC
ACGCCACAGCGCTGCCTCCAGCCCGGCGAGCTCAAGATCGTCTTCTGCCCCGATTCTTCCGACTAGTCACTTGCTACCA-
--CACACACTAGGCTAGCTAGACCGGCTGTGTGTCACTCACGATGCCGGTTATATAATAAGCTAAGCGATTGATTGCTGA
TTCGCTAAGCCAGATTCAACCGAATAATATGTTAACTATTCTTCTTCCGCTTGGACTGATCTTGAGCACTTGACCCGGTC
TGATTGATCTCGCCATGTTTAGCATA-GAAAAACAAGGAAAATAAACCGTAGCAGGCTTAGTTTGTGTTGTTGCTACTAG
CTTCCAAGCACAAGGGAACAGATGCAGGTCGCCATCAGTGGCATCAGCGACGCGCATCGACTATCGACCGTGC---AGCT
TCGTAACCATCGTCGCTCTCGGGTTGTCCGGTAGCTTGCATCTGTCGACCGATTAATGTTCCGTCCATGGCTCATTCCAC
CTCGATCGGAGCTTCCTAGCCTAGGTAGTAC---GTAGGTACACACATCACATGAAGTGGTTCAACATGAGCTCGTCCAC
GTACAGGTCGCCGGTGTTCATCGGCCTCCTGGTGGTGATGTCCGTGGCCTTGGTGCTCCTTCTGCACCACTGCATCCTCG
TCAGCTGCTGCAACGGCGAGAGGATCCGCAGGCGCAGCCGCCGGCGAGGTGCCACGGCGCGGCAGCATGAACAGCAGCCG
GAAGAGAGCGTGGGCGACCTGAGCTCGTCGTCGCGGGTGCAGCTGGTGGCGAAGCCGGTGGTGTGCCGGTACCGGAAGGA
CGAGGAGTGGAGCGAGCCGACATGCCCGGTGTGCCTTGCGGACTTCGCGGACGGCGAGGCGGTGAGGGTGCTGCCGGAGT
GCCTGCACTACTTCCACGCGGACTGCATCGACACCTGGCTCCGCGCCGGCAACACCAGCTGCCCGATGTGCCGCGCCGAG
ACCACGCCCACGCCATCGCCCAGCCCCGCCGGGTCACTCCACCACCAACTCTCCCTCGACATCTCCCTCGAGGACATCCT
AATCCGCACGTAGAGATGGACGGCCGGCGGTGAACAGGAGGAAGAAGCAGAGTGTATGTGTATGTACTACATTGCTCTGT
TTCGCTTCTAAATTCTAATCCGCACGTAGAGATGGGCGGCCGGCGGTGAACAGGAGGAAGAAGAGGTAGTGATCGATTCT
TTTGTTAGAATTCGTTGAAGAAATACTGATAGTGTTGTGTGATTGGCACTAACTCTTTATTCGCTCTTAATTAAGAGTAA
TTCTGATATTTGAGAAGTTAATCTGCATATGAGATATTCTTCATTTCCCCCCATGTGAACTCACATTTTATGCTCATTTG
ATAGTAGTCACTTGGCTGATAGAATTTCAGCTCAGGATGTTGACAAGCTTATTAGAGACAATGGAAGAGTTACGTAAAGC
TGCATGTTCTATGGAACGTAATAGCCTGATGGT-----------------------------------------------
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-------------------------------TTTCTCATAGAGTTTTACCAGAAATTCTAGAGTTTGATAAAATGGATGC
TTGATGATTTCCATAGAGATAATATCAACATTGCTAGGCTGAACGATGACATTATTACTTTA------------------
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>chr4D_1
GCCATCCCCGACCTGGACGACGCCGCCAGCCGCCTCGACGGGGGCGGAGAGGGGCTCGTCACCCTGTCGTTCCCTTCCGG
CGCGTGGTCCGGCCGCGTCGTGGCGCGCACCGGCTGCAGCAGCAGCGATGACTACGACTCCTCCTCCCCCTCCTCCTCCT
CGCCGGCGGCGGTGACCAGGTGCGACACGGGCATGCCGCCGGCGCCGGTGACGGTGGCGCAGGTGAGCGTGCACGGGTCC
GGCGGGCTGGCGGAGTACAGCGTGAGCCTGGTGGACGGGTTCAACCTGCCGGTGATGGTGACGCCGCACGGGTTCGAGCA
GGGCCGGCAGTGCCCGTCCCTCGGCTGCGCGGTGGACCTGGACGTGGACTGCCCCCGCGACGCCAGGGCCCCCGCCGGCG
GGTGCAGGGCCCAGGGCCAGGGGCACTTCTTCAAGGAGAGGTGCCCGGACACTCGGACGACGCCGACGGACGTGGAGGCC
ACGCCGCAGCGCTGCATCCAGCCCGGCGAGCTCAAGATCGTCTTCTGCCCCGATTCTTCCTACTAGTCACTCGCTACCAC
ACCACACACTAGGCTAGCTAGACCGGCTGTGTGTCACTCACGATGCCGGTTATATAATAAGCTTAGCGATTGATTGCTGA
TTCGCTAAGCCAGATTCAACCGAATAATATGTTAACTATTCATCTTCAGCTTGGACTGATCTTGAGCACTTGACCCGGTC
TGATTGATCTCGCCATGTTTAGCAAC-AAAAAACAAGGAAAATA------AGCAGGCTTAGTTTGTGTTGTTGCTACTAG
CTTCCAAGCACAAGGGAACAGATGCAGGTCGCCATCAGTGGCATCAGCGACGCGCATCGACAATCGACCATGCAGCAGCT
TCGTAACCATCGTCGCTCTCGGGTTGTCCGGTAGCTTGCATCTGTCGACCGATTAATGTTCCGTCCATGGCTCATTTCAC
CTCGATCGGAGCTTCCTAGCCTAGGTAGTACTACGTAGGTACACACATCACATGAAGTGGTTCAACATGAGCTCGTCCAC
GTACAGGTCGCCGGTGTTCATCGGCCTCCTGGTGGTGATGTCCGTGGCCTTGGTGCTCCTTCTGCACCACTGCATCCTCG
TCAGCTGCTGCAACGGCGAGAGAATCCGCAGGGGGAGCCGACGGCGAGGTGCCACGGCGCGGCAGCAAGAAGAGCAGCCG
GAAGAGAGCGTGGGCGACCTGAGCTCGTCGTCGCGGGTGCAGCTGGTGGCGAAGCCGGTGGTGTGCCGGTACCGGAAGGA
CGAGGAGTGGAGCGAGCCGACGTGCCCGGTGTGCCTTGCGGACTTCGCGGACGGCGAGGCGGTGAGGGTGCTGCCGGAGT
GCCTGCACTACTTCCACGAGGACTGCATCGACACCTGGCTCCGCGCAGGCAACACCAGCTGCCCGATGTGCCGCGCCGAG
ACCACGCCCACGCCGTCGCCCAGCCCCGCCGGGTCACTCCACCACCAGCTCTCCCTCGACATCTCCCTCGAGGACATCCT
AATCCGCACGTAGAGATGGACGGCCGGCGGTGAACAGGAGGAAGAAGCAGAGTGTATGTGTATCTACTACATTGCTCTGT
TTCGCTTCTAAATTCTAATCCGCACGTAGAGATGGGCGGCCGGCGGTGAACAGGAGGAAGAAGAGGTAGTGATCGATTCT
TTTGTTAGAATTCGTTGAAGAAATACTGATAGTGTTGTGTTATTGGCACTAACTCTTTATTCGCTCTTAATTAAGAGTAA
TTCTGATATTTGGGAAGTTAATCTGCATATGAGATATTCTTCATTTCCCCC-ATGTGAACTCACATTTTATGCTCATTTG
ATAGTAGTCACTTGGCTGATAGAATTTCAGCTCAGGATGTGGACAAGCTTATTAGAGACAATGGAAGAGTTATATAAAGC
TGCATTTTCTATGGAACATAGTAGCC------------------------------------------------------
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-----------------------------------------AGTTTTACCAGAAATTCTAGAGTTTGATAAAATGGATGC
TTGATGATTTCCATAGAGATAATATCAACATTGCTAGGCTGAATTATGACATTATTACTTTA------------------
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>SNPs
-------------S-S-------------------------------S--------------------------S-----
-S----------S------------------------------------------------S------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------------------------------S----------------------------
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--------------------------------------------------S-----------------------------
----------------------------S--------------------S------------------------------
----------------------------------------------------------------------------S---
--------------------------S---------S----------S------------------------S-------
--------------------------------------------------------------------S-----------
-------------------------------------------S------------------S-----------------
-------------------------------------------------------------------------------S
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-----------------------S-----S--------------------------------------------------
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-----------------------------------------------S--------------------------------
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------------------------------------------------------------S-------------------
--S--------------------S--------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------S----S---------S--
------------------------SS--------S---------------------------------------------
--------------------------SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S------------------------
---------------------------------S----------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_142
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------------------------------------------CAGCGATGACTACGACTCCC------------------
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>reverse_1956
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-----------------------------------GCCGGTGGAACATAATAGCCT------------------------
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