>input_sequence_77515
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--------------------------ATGGCCGCCTCCGAGGCCGGGTCTATGATGGGCAGGGTGGCGCGCGAGTGCGAG
TGCGGCGGCGACATCTCCGCCTCCCAGGAGGACGCCCTCGCCGCCTCCCCCTTCCTCGGCGCCGCCGGCGACCACGACGA
GGACTCGGAGGCATTCGCCACCGCTCTCGATCTCTCCCAGCAGCAGC---------------------------------
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-------------------------------------------------AGGAGGAGGACGCCGTCACCATGTGCACCCT
CCCCTCCACCCCTTCCCCCACCAGGTCGCCGTCGCC------TCCCTCCCCGCCCCCGCGCCGGAAGCCGAGGGTGTGCG
TGAGGAAGGTGAGGGTGAGGGGCGCCAAGATCCGCACGCCGACACCCAGCCCAGACCAACA-------------------
-----------------------GCCGGAGCAACCAGAGGAGCAGCCCCATGCGGATGCGGATGCGGATCCCCTCTACAG
GGCGGTGCAAATGGTGGGCGCTCTCACCGGCG---CCACCACCGACAGGAGCAGCAGCGGCAGCAATGAGAATGGCATGG
AGGACTTCCTCACGCTCGCCCGCCGGCGCGGCCTCCTCTAG---------------------------------------
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--
>chr2B_1_TraesCS2B01G620200
TCGATGTCGTCGTCGTGGCGTGGGCGCCTTCTTCTCGGTCGTCTCTGCCGTGCGTGCTTGATGCTCCTCATCTTGTTGCA
GATACGCGCGCAGCCGTGCTTGCAGGCGGAGGAGCAGCAGGAGAGGCAGGAGCAGAGTATCTTGGAGATCACATGGCCGA
CGCAGCGGCATATGCCCAGCTTGTAGACGACGTAGAAGAAGAGGAGCACTGCATTCTTCATATGTCATT-----------
-TGTAATGCAAGCAGTAGATATCCTTAAGCAGTGGCATGTAGTATATGTGCATTTGTGTGTGTCTCTGTTGTGGA---AC
CACTCTTGCTTTGCTTACCAAGGTAGAGGAGGAAGAGCGTGACGGCGGTCTTGGCGAGGCTGGCGACGCAGAAGTTCTCG
ACGTAGCAGAAGATGTCCCATGTTGGGCCACAGACCGTGCTGCCATGCCATGGCCGGCGAGGAGATGAGAGGTTCGCGGT
CAGTAGAAAGAAGAAGGGAAACTGAATGAATGAATGTGGGAGGGTGTTGAGTGAGCCAATGTAAAA-----ACCTGCATG
CCTTGCCGGAGAGGAAGTCGATGGGCTTGGAGAGGAGGCCGGCGAGGACCTTGGTGAACCCCGACACCACCGACTCCAAC
ACGTTCCCCATTTGCTT-------------------------------------CCTGCCATTCGCATCGTCGGTTTCAT
CATCAGGTACGCAGTGATCATGAAGGTGAGAAATAATTGCTACCTGCAGGATGGTTTTGGTGCCGATACGATGATGCTAA
TGGAGTCGCCGGCCGGAGTTGTGTCACTCTTAATTTGCGTGTCCGCCGGAGAGGGAGACAGAGAGAAGGCTAACCGCACC
ACGGCCTCTGTCTTCCTATTTTTTTTC-------CTCAAAACAGAGGCGGAGCAGAGCAGTTCTGAACCGCAGCATCGTA
CTATAT--GTTTGTAACCGACGCGCCTGTCCCGATTCGTATCCCCAATCCGCCGCCGCACCCCCGGCGACCTGACTGAGC
GCCAGGAACACACACACCCACCGACCATGGCCGCCTCCGAGGCCGGGTCTATGATGGGCAGGGTGGCGCGCGAGTGCGAG
TGCGGCGGCGACATCTCCGCCTCCCAGGAGGACGCCCTCGCCGCCTCCCCCTTCCTCGGCGCCGCCGGCGACCACGACGA
GGACTCGGAGGCATTCGCCACCGCTCTCGATCTCTCCCAGCAGCAGC---------------------------------
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-------------------------------------------------AGGAGGAGGACGCCGTCACCATGTGCACCCT
CCCCTCCACCCCTTCCCCCACCAGGTCGCCGTCGCC------TCCCTCCCCGCCCCCGCGCCGGAAGCCGAGGGTGTGCG
TGAGGAAGGTGAGGGTGAGGGGCGCCAAGATCCGCACGCCGACACCCAGCCCAGACCAACA-------------------
-----------------------GCCGGAGCAACCAGAGGAGCAGCCCCATGCGGATGCGGATGCGGATCCCCTCTACAG
GGCGGTGCAAATGGTGGGCGCTCTCACCGGCG---CCACCACCGACAGGAGCAGCAGCGGCAGCAATGAGAATGGCATGG
AGGACTTCCTCACGCTCGCCCGCCGGCGCGGCCTCCTCTAGCCACCCACCCTAACAGCCAGGAGCAGCAATGAGGATGGA
TGCCGTCAGGTCAGTCAGGTA-GTACAACACAACGGAGATCCACTGATAAGCAAGAACCAACACCTGCTGGTGCTTGGCC
ATGGCGCTCAACATTCATACATTCAGTCAGCCAGCCATGCCTAGGAAAGATGTAATCATATTGATTAGACTAGATTACTG
CAACTCAGACGCTTACCGCCAGCCATGTCTGTTTTCTTCCTTCAATCCAGTGCCTGGTTGATGATTGCTCCATGGAATCT
AGTAGAGTACTCCCTCCGTTCAGAAATACTCGTCATCTAGATACATCCTTTTTGTCCATTTTGATGACGAGTATTTTCGG
ACGGAGGGAGTACTAATTTATCACCAATGAATATACTAATTATATTATATGTTCATCACTGCTCAATGCATCAGGCAGGC
AGGCAGGCTCATGCTCATTGTTTTTCCAAGTACATTCACGATCTTTCATATACAGCGCGTTAAGCTCTTCCTGCTGGTGT
TCAACTGGGCAATTTACTTCTGCTAACATAAAACACAACCACACTAACTGTCAATCGTTGGGATTTTACATAACTATAAA
AGAAATAGGGATTTTATTTTTTAGCCATGATATATAACCATGAGAATGCCACCGAACCGACCGCTTGATGAGTTTTCGAC
ATTTTGCAACATAAAAGTCGATTGTACCAACTTCATTCATTCATTCATTCATTCATCCACCTCTGCACTTCATAGCCAAA
TGCACCAAGTGAATTTAGTTTTACCACAAGTTGTCGACCAAGCTCCCTCTTTCAGTCCAGGGGACTCACCAACACACCAA
CTGAATTTCTGTCTGTCTGTCCTCCGCCGAGTTAACTCAAAGAGATGGAACGGAGGAGATAAAAGAGAGTAACCTCTACA
CACTAGTTTTTTCAGGCAATCAATGCCAAATTTTCATTCTGCTTCTCCAGCAACAAATGCTGGTTTATTTATTTACTTTT
TT
>chr2D_1
TCAATGTCGTTGTCATGGCGTGGGCGCCTTCTTCTCGGTCGCCTCTGCCGTTGGCGCTTGATGCTCCTCATCTTGTTGCA
GAGGCGCGCGCACCCGTGCTTGCAGGCGGAGGAGGAGCAGGAGAGGCAGGAGCAGAGGATCTTGGAGATGACATGGCAGA
CGCAGCGGCATATGCCCAGCTTGCAGACGACGTAGAAGAAGAGCAGCACTGCATCCATGTGTACATGTGATACTCCTACT
ATGTAATGTAAGCAGCAGAG-------------------------------ATTTGTGTGTGTCTCTGTTGTTGTGGCAC
CACTCTTGCTTTGCTTACCAAGGTAGAGGAGGAAGAGCGTGGCGGCGGTCTTGGCGAGGCTGGCGACGCAGAAGTTGTCG
ACGTAGCAGAAGACGTCCCACATCGGGCCGCAGGCCGTGCTGCCATGCCATGGCCGGCGAGGAGAGGAGAGGTTGGCGGT
CAGTAGAAGAAG---GGGAAACTCAATGAATGAATGAATGAATGAATGAATGAATGTAGAAGTAGGTAATGACCTGCATG
CCTTGCCGGAGAGGAAGTGGATGGGCTTGGAGAGGAGGTCGGCGAGGACCTTGGTGAAGCCCGACACCAGCGACTCCAAC
ACGTTCCCCATTTGCTGCCTGATTCTTCTTCTTCTTCTTCTTCTTCAGTCCGTCCCTGGCATCCGCATCCACGCCGCCGA
CCAATCTGGACCTGGAGTCCTGGACTGGAGGATGCGCGTGTGTGGTTTTGCT----------------------------
-------GCCGGCCGGAGTTGTGTCT-----------------CGCCGGAGAGGGAGAGAGAGAGGGCGCTAACCGCACC
ACGTCCTCTGTCTTGCCTTTTTTTTCTTCTTCTTCTCAAAACAGAGCC-GAGCAGAGCAGTTTTGAACCGCACCGCATTC
TAAGTTAAGTTTGTAACCGACGCGCCTGTCCCGATTCGTATCCCCAATCCGCCG---------------CCTGACCGAGC
GCCAGGAAGGAT----CCGACCGACCATGGCCTCCAAGACCGAGTGCGAGT------------------GCGAGTGCGAG
TGCGGCGGCGACATCTCCGCCTCCCAGGAGGACGCCCTCGCCGCCTCCCCATTCCTCGGCGCCGCCC-------------
-----------------------CTCTCGATCTGTCCCAGCAGCAGCGGGAGGAGGAGGAGGTGGAGGACATGGTCACCA
TGTGTACCCTCCCCTCCACGCCTTCCCGTTCGCCGTCGCCCGCGCCTCCCCCAGACCCCTTCCTGGGCGCCGACGACAAC
GACGAGGAGGTCTTGTCCGATCTCCCCCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGACGCCGTCACCATGTGCACCCT
CCCCTCCACCCCTTCCCCCACCAGGTCGCCGTCGCCACCGCCTCCTTCCCCGCAACCTCGCCGGAAGCCGAGGGTGTGCG
TCAGGAAGGTCAGGGTCAGGGGCGCCAAGATCCGCACCCCGACACCCAGCCCCGACCTACCGCCGGCAGTGGAGCCACAG
CCACAGCCAGCCCAACCGACAGCGCCGGAGCAAGCAGAGCAGCAGCCCCATGCGGATGCGGAT------CCCCTCTACAG
GGCGGTGCAAATGGTGGGCGCCCTCACCGACGCCACCGCCACAGCCAGGAGCAGCAGCAGCAGCAATGAGAATGCCGTCG
AGGACTTGCTCGCGCTCGCCCGCCGTCGCGGCCTCCTCTAGCCACCCACC-----AGCCAGGAGGAGCAATGAGGATGGA
TGCCGCCAGGTCAGTCAGTCAGGTACACAACAATGGAGATGGATGCACTGACAAGAAGGAACACCTGCTGGTGCTTGGCC
ATGGC---------------------------------------------------------------------------
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--
>SNPs
--S-------S---S--------------------------S---------SS-S-------------------------
--SS--------S---------------------S----------------------S-----------S-------S--
-----------------------S-------------------S----------S-S-SSSSSSSSS-S-----------
--------S------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S-S-----
-----------------------------------------S----------------------------------S---
-------------S------SS-S-----S---S-------------------------------S--------S-----
--------SS-SSSS--------S------------SSS--SS-SS-SS-SSS-SSS-SSSSS-SS--------------
------------------S-------------------S-------------------S----------S----------
----------------S-----------------------------------------S---S------SS--SSSS-SS
-SSSSSSSSSS-S-SSS--S--S-SSS---S-SSSSSSSS-SSSSSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS------------------SSSSSSSSSSSSSSSSSS---------------S------SSS------------
---S----------S-SS-------SS-------------------S-S-------------S---------S-SSSS-S
SS-SS-------------------------------------------------SSSSSSSSSSSSSSS------S----
--------SSSSSSSS--S-------------S--SSSSSS-SSS-SSSSSSSSSSSSSSSSSSSSSSS-----------
--------------------------------------------------S---------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS----------S----------------------------------------------
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---------------------------------------------S-------SS--S----------------------
-S--------S-----S--------------------S--------------S----S--S-------------------
---------------------------------S-----S-----------------------SSSSSS-----------
---------------------S-------S-------S----S-S-------------S---------------S-S-S-
-------S---S-------------S------------------------SSSSS---------S---------------
-----S------------SS-------SS----S------SS-SSS-SSSS------SS---------------------
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS
>forward_791
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---------------------------------------------------TGGTTTTGGTGCCGATACGA---------
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--
>reverse_1891
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--------------------------------------------------GCAAGAACCAACACCTGCTG----------
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--
