>input_sequence_77501
--------------------------------------------------------------------------------
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-------------------------------------ATGGCAAACACCAAGCTTGTAGTCGTGGGCGTGGCCATCCTTG
TAATCCTGCTGCAGGTGTCGACGTGCGCGGTGGCCCGG------CACCACGCCAAGCCGGACCCGTGCGCCAGCGAGGAC
GACT---CCGTGCCGGGCATGCTGCACAAGCACAAG------AAGCCCCACTGCACCTCGCCGGGCCGCA------GCGG
CG------G------CGGCGGCGGCGGCACCCCAGGCGTGATGACGGTGAACGGCTTCCAGAAGGGCCAGGACGGCGGCG
GGCCGTCGGAGTGCGACGGCAAGTACCACAGCAACGGCGACATGATCGTGGCGCTGTCGACGCGCTGGTACGCGGGCGGA
CGCCGGTGCGGCAAGATGATCCGCATCACCAGCAAGCACAACGGGCGCACCGTGCAGGCCAAGGTGGTGGACGAGTGCGA
CTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAGGCCGTGTGGAAGGCGCTCGGGCTCGACAGCAACATCG
GCGAGGTGCCGGTGACATGGTCCGACGCCTGA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr1A_1_TraesCS1A01G167800
GAACAGCTCCAGCAGATGCTGTAGCGCTAAAAAGTTTTGGGCGCGCGCTGAAAAACGCTATCGCGTGCATCATATTTTGG
GCTCCGGATTGTGTGCGCTTCACAATTTGCACTGTCTGTTTTTTGGACACGTGTCCTTGGTCGTCTACTAAAGCAATGTT
GATCCCGACGTATTAAAAATGCTAAAGTGACGCGCTATAACTTTTATTAGGCGCGATATTTTTGTGTGGCCGTTGGAGAT
GCTTTAAGTGGTGACTGCTCGAACGATTTCGAGAAGATGACCGGGCACCAGAGTTCCGCCCTGATCCGGGCAGCAAGATC
GAACGGTTAAAACAGCGTTTGCTTCTCGCAACAACAAAAAAACTGCGTTTGCTGGAAAAACTTTTCTGGGAAACGTCAGC
CAAGTTATCATCTCGGTTTTTCCTTTTTGCGGGGAAAGTTATCATCTCCGTTAACCGTTATTAAACAACAGTTACGCATT
GGACTCACCAACGAGATACGATACACCTA---CT--CTTATCCA-----------GTCATATCGTAGTACATCACGATTA
ATCCGCTTGGGTCTTTGGAATTTCCTTTGCCGGGAGATGTAAAATTTGGTACGATCTCTCTGCCAAGAGCGACCTGCTGC
GTTCTGTCCTCGGTTATTCCCGCTGTAACATTAGCGACACCACGTAATCCAAACGAACTCATCTCTACAATTCAGTTGTC
TTTTAACGCAGCCATTTCGGGTCTGTATCGAGCACACCGAGAGAGTATCATACTCAGTAAAATTCCTTGTACTCATCTGA
AAAAAA---------------GGAGGCTCTTGCCCGGAAGGTCAGGAACCACACAAATGCTGCCA-------------GC
ACACGTGTGACA----AAGTACGGTGCATCCCGTGCTTAGC--------CTGCAGCTGGTTCTCGTACGTGCGCC--TAT
ATATACTCTTGGAAGCAGCGTGATCAGAACCAAGTACGCAGGCCAAGTCAAGTGCAAAGCTAGGCTAGCAAATACT-TG-
------AGCAGGCAGGAGG-----------TTTAGCAATGGCAAACACCAAGCTTGTAGTCGTGGGCGTGGCCATCCTTG
TAATCCTGCTGCAGGTGTCGACGTGCGCGGTGGCCCGG------CACCACGCCAAGCCGGACCCGTGCGCCAGCGAGGAC
GACT---CCGTGCCGGGCATGCTGCACAAGCACAAG------AAGCCCCACTGCACCTCGCCGGGCCGCA------GCGG
CG------G------CGGCGGCGGCGGCACCCCAGGCGTGATGACGGTGAACGGCTTCCAGAAGGGCCAGGACGGCGGCG
GGCCGTCGGAGTGCGACGGCAAGTACCACAGCAACGGCGACATGATCGTGGCGCTGTCGACGCGCTGGTACGCGGGCGGA
CGCCGGTGCGGCAAGATGATCCGCATCACCAGCAAGCACAACGGGCGCACCGTGCAGGCCAAGGTGGTGGACGAGTGCGA
CTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAGGCCGTGTGGAAGGCGCTCGGGCTCGACAGCAACATCG
GCGAGGTGCCGGTGACATGGTCCGACGCCTGAGGCCAT--ATCCGCCGGCCATGGGTTCCAGGTTGCACGAAGCCAGTCA
CGTACGGTGTGCGTGGAAAAGGTCTCTAGCTGCTTCCTGGACCTGGGTAC---GTACGTATGTATACGTTTGAAGTGCGA
GTGTCGTT---GTCAATCTCGATGGGTAGTGCGAGCTTGTCGAG------TAGTTACTTCGTTG-----CAGAATAAAAC
T----------------------------ACTACCTCTGTGGATGGTAGTGCGGATTTATCTTG-CA---CTACTAATAT
CCACGCGTGTGTACGTGTCGGTGTCAGTCTAAGTTTACTATCGCTGTTTTCTATTGTGGGAATATATGATATAATCATAC
------TATGCTGTAATTGTACTAGGAGTATAATCATACTACTCTCGTATTAGGAATAAAACTTTTGCTTTGATGTACCC
TTCTAAGGGGGTGTTTGGTTCAGAGACTTTTTAGTCCCAGATACTAGAAAAAATCCTTAAAAAGTCCCTAGAAACCAAAC
AGGAGGAACTTTTTCTACAGGGACTAGAAAAAGACTCTACTAGAGAGTCTTTTTTGATTAGTCTCTATGACTAGAAAAAG
TTCTAGGACTTCTGAATCAAACACCCCCTAAACACATTGACGGCTGAAATCTCTATATACCGTCTCATAATAAAGGGTAG
AATGGTCATTTCACCCGTGCCGATACGCAGCCTGCGCATGAATCGAACTCAAGGCCTCTTGGTCTAAGGTGGACCACACT
AACCAATTAGGACATCCTAATGCGTGTGCGTCTTTACTTC-----TTTTTTCTTCTACTTCACTTCGCGACTGGGCAAGC
CCATTGTTGAATCGGTTCTTTTATCACTACTAGCAAACATGCCCGTGCGTTGCAATGGAAGAAAAAAATACCTCTCATAC
ATACTCTCGAGACATCGATAAATCTCTTGAAATCTTGCATGACGCCAGATGAAAACAACATGAT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ACCTAGTTGTAGGTATCTCTTTACGCATTTGTTGTCGTTCCTCCTCGGTGATGTG
CAATAAATATTTTCA
>chr1D_245
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TAAGTGATGACTGCGCGAACGATTTCCAGAAGATGACCTGGCACCAGAGTTGCGCTCAGATCCGGGCAGCAAGATC
GAACGGTTAAAACAGCGTTTGCTTCTCGCAACAACAAAAAAACTGCGTTTGCTGGAAAAACTTTTCTGGGAAACGTCAGC
CAAGTTATCATCTCAGTTTTTCTTTTTTGCGGGGAAAGTTACCATCTCCGTTAACCGTTACTAAACAACAGTTACGCATT
GGACTCACCAACGAGATACGATACACCTA---CT--CTTATCCA-----------GTCATATCGTAGTACATCACGATTA
ATCCGCTTGGGTCTT-GGAATTTCCTTTGCGTGGAGAAGTAAAATTTGGTACGATCTCTCTGCCAAGAGCGACCTGCTGC
GTCCTGTCCTCGGTTATTCCCGCTGTAACATTAGCGACACCACGTAATCCAAACGAACTCATCTCTACAATTCAGTTGTC
TTTTAACGCAGCCATTTCGGGTCTGTATCGAGCACACCGAGAGAGTATCATACTCTGTAAAATTCCTTGTACTCATCT-A
AAAAAA---------------GGAGGCTCTTGCCCGGAAGGTTAGGAACCACACAAATGCTGCCA-------------GC
ACACGTGTGACA----AAGTACGGTGCATCCCGTGCTTAGC--------CTGCAGCTTGTTCTCGTACGTGCGCC--TAT
ATATACTCTTGGAAGCAGCGTGATCAGAACCAAGTAAGCACGGCAAGTTAAGTGCAAAGCTAGGCTAGCAAATACT-TA-
------AGCAGGCAGGAGG------------TTAGCAATGGCAAACGCCAAGCTTGTAGTCGTGGGCGTGGCCATCCTTG
TAATCCTGCTGCAGGTGTCGACGTGCGCCATGGCCCGG------CACCACGCCAAGCCGGACCCGTGCGCCAGCGAGGAC
GACT---CCGTGCCGGGCATGGTCCACAAGCACAAGCACAACAAACCCCACTGCACCACGCTGGGCCACA---------A
CG------G------CGGCGGCGGCAGCACCCCAGGCGTGATGACGGTGAACGGCTTCCAGAAGGGCCAGGACGGCGGCG
GGCCGTCGGAGTGCGACGGTAAGTACCACAGCAACGGTGACATGATCGTGGCGCTGTCGACGCGCTGGTACGCGGGCGGA
CGCCGGTGCGGCAAGATGATCAACATCACCAGCAAGCACAACGGGCGCACCGTGCAGGCCAAGGTGGTGGACGAGTGCGA
CTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAGGCCGTGTGGAAGGCGCTCGGGCTCGACAGCAACATCG
GCGAGGTGCCGGTGACATGGTCCGACGCCTGAGGCCAT--ATCCGCCGGCCATGGGTTCCAGGTTGCTCGAAGCCAGTCA
CGTACGGTGTGCGTGGAAAAGGTCTCTAGCTGCTTCCTGGACCTGGGTACGTAGTACGTATGTATACGTTTGAAGTGCGA
GTGTCGTT---GTCAACCTCGACGGGTAGG--GAGCTTGTCGAG------TAGTCACCTCTTAT-ATAACC---------
----------------------GAATAAAACTACCTCTGTGG--GGTAGTGCGGGCCTATCTTG-------TACTAAGAT
CCACGCGTGTGTGCGTGTCGGTGTCAGTCTCAGTTTACTATCCTAGTTTTCTGTTGTGG-AATATA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr1B_439
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TTATCATTCCCGTTAACCGTTACTAAACAACAGTTACGCATT
GGACTCACCAACCAGATACGATACACTTA---CT--CTTATCCG-----------GTCATATCGTAGTACTTCACGATTA
ATTCGCTTGGATCTT-GGAATTTCCTTTGCCTGGAGAAGTATAATTTGGTACGATC--TCTGCCAAGAGCGACCTGCTGT
GTTCTGTCCTCGGTTATTCCCGCTGTAACATTAGCGACACCACGTAATCCAAACGAACTCATCTCTACAATTCAGTTGTC
TTTTAACGCAGCCATTTCGGGTCTGTATCGAGCACACCGAGAGAGTATCATACTCTGTAAAATTCCTTGTACTCATCT-A
AAGAAA---------------GGAGGCTCTTGCCCGGAAGGTTGGGAAC-------------------------------
-CACGTGTGACA----AAGTACGGTGCATCCCGTGCTTGGC--------CTGCAGCTGGTTCTCGTACGTGCGCC--TAT
ATATACTCTTCGAAGCAGCGTGATCAGAACCAAGTACGCACGGCAAGTTAAGTGCAAAGCTAGGCTAGCAAAATAGATA-
------AGCAGGCAGGAGG-----------TCTAGCAATGGCAAACGCCAAGCTTGTAGTCGTGGGGGTGGCCATCCTTG
TAATCCTGCTGCACGTGTCTACGTGCGCCATGGCCCGG------CACCACGCCAAGCCGGACCCGTGCGCCAGCGAGGAC
GACT---CCGTGCCGGGCATGCTGCACAAGCACAAGCACAAGAAGCCCCACTGCCCCTCGCCGGGCGGCAGCGGTGGTGG
CGGCGGCCG------CGGAGGCGGCGGCACCCCAGGCGTGATGACGGTGAACGGCTTCCAGAAGGGTCAGGACGGCGGCG
GGCCGTCGGAGTGCGACGGCAAGTACCACAGCAACGGTGACATGATCGTGGCGCTGTCGACGCGCTGGTACGAGGGCGGA
CGCCGGTGCGGCAAGATGATTCGCATCACCAGCAAGCACAACGGGCGCACCGTGCAGGCCAAGGTGGTGGACGAGTGCGA
CTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAGGCCGTGTGGAAGGCGCTCGGGCTCGACAGCAACATCG
GCGAGGTGCCCGTCACATGGTCCGACGCCTGAGGCCAT--ACCCGCCGGCCATGGATTCCAGGTTGCTCGAAGCCAGTCA
CGTACGGTGTGCGTGGAAAAGGTCTCTAGCTGCTTCCTGGACCTGGGTACGTAGTACGTATGTATACGTTTGAAGTGCGA
GTGTCTTTTGTGTCAATCTCGATGAGTAGG--TAGCTTGTCGAG------TAGTTACTTCGTTG-----CTGAATAAAAC
T----------------------------ACTACCTCTGTCGATGGTAGTGCGGGTTTATCTTG-TA---CTACTAATAT
CCACGCGTGTGTACGTGTCGGTGTCAGTCTAAGTTTACTATCGCTGTTTTCTGTTGTGAGAATATATAATATAATG----
--------------------------------------CTACTCTCGTATTAGCAATAACACTTTTTGCTTCGGTGTAC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CCCTCTAAACACATTGACGGCTGAGATTTCTATA--CCCTTTCATAATAAAAGGTAG
GATGATATTTTCACCCGCGCCGATATGCGGCCTGTGCATGAATCGAACTCAAGATCTCTTGGTCTAAGGAGGACCACACT
AACAAACTAGGGCATCCTAATGCTTGTGTGTCTTTACTTCTCCTATTTTTTTTTCTACTTCATTTCGCGGCTGGGCCGGA
TCATTGTTGAATCGGTTCTTTTATCACTACTGGCAAACATGCCCGGGCGTTGCAACGGAAGAAAATTTTATCTCTCATAC
ACACTCTCGAGACATCGGTAAGTCTCTAGAAATCTTGCATGACGTCAGATGAAAACAACATGATATGTGATGTTGCGCAA
AAAACATAGAGATGCGATAATTTTTGAAGTGTACTCAAGGGGTTTCCAACTTGTGGTTGAGATGGTTAGGTGGACAGTGA
TATCCCCAACCCATCAGGTTTCAAATCCTGGTGCTCGCATTATTTCTGGATTTATTTCAGGATTTTCGGCGATGCGCTTT
CAGTGGGAGGAGACGTTCCCGTCGACCACGAGGTGCCTACGGTAACTTCGTAAATCTCAAGATGATATGCCGGCTCAGTC
TTTCGGAGGTGCTCATAAGGGTAGGGTGTGCGTGTGTACGTTCATAAGGGTGAGTGTATGCGCGTGTATGAGCGCTTGTG
TCTGTACTGATGCTAAAAAAAATCTACCTATTTGTAGGTATC-CTTTACGCATTTGTTGTCGTTCCTCCTCAGTGATGTG
CAATAAATATTT---
>chr1A_458
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TTATTAAACAACAGTTACACATT
GGACTCACCAACAAC-TACCATACACTTGACTCT--CTTATCTAGTAGTATTAATGTATTATCGTAGTACCTGACGATTA
ATCCGCTTGGATCCT-GTAATTTCCTTTCCCTGGAGAAGTAAAATTTGGTACGATCTCTCTGCCAAGAGCGACCTGCTCT
GTTCTGTCCTCGGTTATTACCGCTGTAACACCAGCGACACCACGTAATCCAAACGAACTCTTCTCTACAATTCAGTTGTC
CTCTAACTCAGCCATTTTTGTTATGTATCGAGTACACCGAGCGAGTATCCTACTCAGCAAAACTCCTTGCACTCATCT-A
TCTACACAAAACGACTGTTTTGGGGTCTCTTACCCGACAGGTTAGGAGCTACACAAATGCCGCCATGCCCATGC------
ACACGTGTGACTAATTAAGTACGGTGCATCCCGTGCTTGTC--------CTGCAGCTGATTCTCGCGCCTGCGCCTATAT
ATAAACTCCTCGAAGCAGCTTGATCAGAACCAAGTACGCACGCCAAGTCAAGTGCAAAGCTAGGCTAGCAAATACT-TG-
------AGCAGGCAGGAGG-----------TTTAGCAATGGCGATCGCCAAGCTTGTAGTCGTGGGCATGGCCATCCTTG
TAATCCTGCTGCAGGTGTCGACGTGCGCCGTGGCCCGG------CACCACGCCAAGCCGGACCCGTGCGCCAGCGAGGAC
GACT---CCGTGCCGGGCATGCTGCACAAGCACAAGCACAAGAAGCCCCACTGCCCCTCGCCGGGCGGCACCGGTGGTGG
CG------G------CGGCGGCGGCGGCACCCCAGGCGTGATGACGGTGAACGGCTTCGAGAAGGGCCAGGAGGGCGGCC
CGCCGTCGGAGTGCGACGGCAAGTTTCACAGCAACAAGGAAATGATCGTGGCGCTGTCGACGAGGTGGTACGCGGGCGGA
CGCCGGTGTGGCAAGATGATCAACATCACCAGCAAGAAGAACGGGCGCACCGTGCAGGCCAAGGTGGTGGACGAGTGCGA
CTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAGGCCGTGTGGAAGGCGCTCGGGCTCGACAGCAACATCG
GCGAGGTGCCCGTCACATGGTCCGACGCCTGACACCATGTATTCCCCGGCCATGGATTCCAGGTTGCTCGAAGCCAGTCA
CGTACGGTGTGCGTGGGAAAGTTCTCTAGCTGTTTCCTCGCCCTGGGTAC---GTACGTATGTATACGTTTGAAGCGCGA
GTGTCGTT---GTCAACCTCGCCGGGTAGG--TAGCTTGTCGAG------TAGTTACTTCGTATAATAACA---------
----------------------GAATAAAACTACCTCTGTGGATGGTAGCGCGGGTTTATCTTGGTACTCCTACTAAGAT
CCACGCGTGTGTACGTGTCGGTGTGAGTCTCAGTTTACTATCGCTGTTTCCTGTTGTGG-AATAT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr1B_458
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TTATTAAACAACAGTTACACATT
GGACTCACCAACAAC-TACGATACACTTGAGTCT--CTCATATA-----------GTATTATCGTAGTACATGACGATTA
ATCCGCTTGGATCCT-GTAATTTCCTTTGCCTGGAGATGTAAAATTCGGTACGGTCTCTCTGCCAAGAGCGACCTGCTCT
GTTCTGTCCTCGGTTATTACCGCTGTAACACCAGCGACACCACGTAATCCAAACGAACTCTTCTCTACAATTCAGTTGTC
TTCTAACGCAGCCATTTTTGTTCTGTATCGAGTACACCGAGCGAGTATCCTACTCAGCAAAACTCCTTGCACTCATCT-A
TCTACACAAAACGATTATTTTGGGGTCTCTTACCCGACAGGTTAGGAGCCACACAAATGCCGCCATG------CCCATGC
ACACGTGTGACA----AAGTACGGCGCATCCCGTGCTTGGCGCCTTGGCCTGCAGCTGATTCTCGTGCCTGCGCC--TAT
ATAAACTCCTCGAAGCAGCTTGATCAGAACCAAGTACGCACGCCAAGTCAAGTGCAAAGCTAGGCTAGCAAATACTACTA
GTACTTAGCAGGCAGGAGG-----------TTTAGCAATGGCAAACGCCAAGCTTGTAGTCGTGGGCATGGCCATCCTTG
TAATCCTGCTGCAGGTGTCGACGTGCGCCGTGGCCAGG------CACCACGCCAAGCCGGACCCGTGCGCCAGCGAGGAC
GACT---CCGTGCCGGGCATGCTGCACAAGCACAAGCACAAGAAGCCCCACTGCACCTCGCCGGGCGGCACCGGTGGTGG
CG------GTGGCGGCGGCGGCGGCGGCACCGCAGGCGTGATGACGGTGAACGGCTTCGAGAAGGGCCAGGAGGGCGGCC
CGCCGTCGGAGTGCGACGGCAAGTTTCACAGCAACAAGGACATGATCGTGGCGCTGTCGACGAGGTGGTACGCGGGCGGA
CGCCGGTGCGGCAAGATGATCAACATCACCAGCAAGCACAACGGGCGCACCGTGCAGGCCAAGGTGGTGGACGAGTGCGA
CTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAAGCCGTGTGGAAGGCCCTCGGGCTCGACAGCAACATCG
GCGAGGTGCCCGTCACATGGTCCGACGCCTGAAAACA--TATTCGCCGGCCATGGATTCCAGGTTGCTCGAAGCCAGTCA
CGTA-GGTGTGCGTGGGAAAGTTGTCTAGCTGTTTCCTGGCCCTGGGTAC---GTACGTATGTATACGTTTGAAGTGTGA
GTGTCGTT---GTCAATCTCGATGGGTAGG--TAGCTTGTCGAGTAGTACTAGTTACTTCGTATAATAACA---------
----------------------GAATAAAACTGCCTCTGTGGATGGTAGTGCGGGTTTATCTTG-TACCCCTACTAAGAT
CCACGCGTGTGTACGTGTCGGTGTGAGTCTCGGTTTACTATCGATGTTTCCTATTGTGG-AATATATATCATCATATACT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr1D_477
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CATT
GGACACACCACCAAC-TACGATACACTTGGCTCTTGCTCATCTA-----------GTCATATCGTAGTATATCACGATTA
GAAAGCTTTGATTTT-GGAATTTTCTCTGCTTGGAGTAGTGAAAACTGGTACGTTCTCTCTACCAAGAGCGACCTGCTGT
GTTCTGCCCTCAGTTATTACCGCTGTAATATTAGCGACACCATGTAATCCAAACGAACTCATCTCTACAATTCAGTTGTC
ATCTAACGCAGCCATTTTAGGCCTGTATCGAGCACACCGAGAGAGTATCGGTATATA-----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CGTACGTGCGCC--TAT
ATAAACTCCTCGAACCAGCCACAACTCATCAC--CACCCACAGCAAGTCAAGTCAAAGGGCAGC----------AGGTA-
------AGCTGGCA-GAAG-----------CTTAGCCATGGCGAACACGAGGCTCGCGGT------CGTGGCCATGCTTG
TGATCTTACTGCAGCTGTCCACGTTATCCGTGGCCCGG------CACCACGCCAAGCCGGACCCCTGCGTCGGCGAGGAC
GACT---CCGTGCCAGGCATGG------TCCACAAGCACAAGAAACCCCACTGCCCGTCGCCGGGCGGCAGCGGTGGCGG
CG------G------CGGCGGCGGCGGCACGCCTGGCGTGATGACGGTGAACGGGTTCCAGAAAGGCGAGGACGGCGGCG
CACCGTCGGAGTGCGACGGCAAATACCACAGCGACAAGGACATGATCGTGGCGCTGTCGACGAGGTGGTACGCGGGCGGA
CGCCGGTGCGGCAAGATGATCAACATCACCAGCAAGAAGAACGGGCGCACCGTGCAGGCCAAGGTGGTGGATGAGTGCGA
CTCCAACCACGGCTGCAAGACCAACATCGTGGACACCACGGAAGCCGTGTGGAAGGCGCTCGGGCTCGACAGCGACATCG
GCGAGGTGCCCGTCACATGGTCCGACGCCTGAGACCAT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr1B_477
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CATT
GGACACACCACCAAC-TACGGTACACTTGGCTCTTGCTCATCTA-----------GTCATATCGTAGTATATCACGATTA
AAAAGCTTTGATTTT-GGAATTTTCTTTGCTTGGAGTGGTAGAAACTGGTACGTTCTCTCTGCCAAGAGCGACCTGCTGT
GTTCTGCCCTCGGTTATTACCGCTGTAATATTAGCGACACCATGTAATCCAAACGAACTCATCTCTACAATTCAGTTGTC
ATCTAACGCAGCCATTTTAGGCCTGTATCGAGCACACCGAGAGAGTATCGGTATATA-----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CGTACGTGCGCC--TAT
ATAAACTCCTCGAACCAGCCACAACTCATC--AGCACCCACAGCAAGTCAAGTTAAAGGGCAGC----------AGGTA-
------AGCCGGCA-GAAG-----------CTTAGCCATGGCGAACACGAGGCTCACGGT------CGTGGCCATGCTTG
TGATCTTACTGCAGCTGTCCACGTTATCCGTGGCCCGG------CACCACGCCAAGCCAGACCCCTGCGTCGGCGAGGAC
GACT---CCGTGCCGGGCATGG------TCCACAAGCACAAGAAACCCCACTGCCCGTCGCCGGGCGGCGGCGGTGGTCG
CG------G------CGGCGGCGGCGGCACGCCTGGCGTGATGACGGTGAACGGGTTCCAGAAAGGCGAGGACGGCGGCG
CACCGTCGGAGTGCGACGGCAAGTTCCACAGCGACAAGGACATGATCGTGGCGCTGTCGACGAGGTGGTACGCGGGCGGA
CGCCGGTGCGGCAAGATGATCAACATCACCAGCAAGAAGAACGGGCGCACCGTGCAGGCCAAGGTGGTGGATGAGTGCGA
CTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAAGCCGTGTGGAAGGCGCTCGGGCTCGACAGCGACATCG
GCGAGGTGCCCGTCACATGGTCCGACGCCTGAGACCAT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr1D_590
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TTGGTACGATCTCTCTGCCAAGAGCGACCTGCTCT
GTTCTGCCCTCGGTTATTACCGCTGTAACACCAGCGACACCACGTAATCCAAACGAACTCTTCTCTACAATTCAGTTGTC
TTCTAACGCAGCCATTTTTGTTCTGTATCGAGAACACCGAGCGAGTATCCTACTCAGCAAAACT---------CATCT-A
TCTACACAAAACGATTATTTTGGGGTCTCTTACCGGACAGGTTAGGAGCCACACAAATGCCGCCATG------C------
ACACGTGTGACTAATTAAGTACGGCGCATCCCGTGCTTGGA--------CTGCAGCTGGTTCTCGTGCATGCGCC--TAT
ATAAACTCCTCGAAGCAGCTTGATCAGAACCAAGTACGCACGCCAAGTCAAGTGCAAAGCTAGGCTAGCAAATGCTACTA
GTACTTACCAGGCAGGAGG-----------TTTAGCGATGGCAAACGCCAAGCTTGTAGT------CATGGCCATCCTTG
TAATCCTGCTGCAGGTGTCGACGTGCGCCGTGGCCCGG------CACCACGCCAAGCCGGACCCGTGCGCCAGCGAGGAC
GACT---CCGTGCCGGGCATGCTGCACAAGCACAAGCACAAGAAGCCCCACTGCCCCTCGCCGGGCGGCACCGGTGGCGG
CG------G------CGGCCGCGGCGGCACCCCAGGCGTGATGACGGTGAACGGCTTCGAGAAGGGCCAGGAGGGCGGCC
CGCCGTCGGAGTGCGACGGCAAGTTCCACAGCAACAAGGACATGATCGTGGCGCTGTCGACGAGGTGGTACGCGGGCGGA
CGCCGGTGCGGCAAGATGATCAACATCACCAGCAAGCATAACGGGCGCACCGTGCAGGCCAAGGTGGTGGACGAGTGCGA
CTCCAACCACGGCTGCAAGACCAATATCGTGGACACCTCCGAAGCCGTGTGGAAGGCGCTCGGGCTCGACAGCAACATCG
GCGAGGTGCCCGTCACATGGTCCGACGCCTGAGACCATGTATTCCCCGGCCATGGATTCCAGGTTGCTCGAAGCCAGT--
---------TGCGTGGGAAAGTTCTCTAGCTGTTTCCTGGCCCTGGGTAC---GTACGTATGTATACGCTTGAAGTGTGA
GTGTCGTT---GTCAATCTCGATGGGTAGG--TAGCTTGTCGAG------TAGTTACTTCGTATAATAACAGAATAAAAC
AGCCTGCAAAAAACAAATAACAGAATAAAACTACCTCTGTGGATGGTAGTGCG--TTTATCTTC-TACTCCTACTAATAT
CCACGCGTGTGTACGTGTCGGTTTGAGTCTCAGTTTACTATCGCTGTTTCCTGTTGTGG-AATATATATCATAATCATAT
ACTCCGTATGTTGTAATTGTACTA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr5B_946
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CAAGGCAAGTGCAAAGCTAGGCTAGCAAATAAT-TA-
------AGCAGGCAGGAGGAGCTTCACTGCTTCAGCAATGGCGAGCGCCAAGCTGGTGCT------CGTGGCCGCACTTG
TGATCCTGCTGCAGGCGTCGACGTGCGCGGTAGGCCGGCACCACCACCACGCCAAGCCGGACCCGTGCGTCGGCGAGGAC
GACGGCCCCGAGCCGGGCATGC------GGCACAGGCACAGGAAGCCCCACTGCCCGTCGACCCCA------GGCGGCCA
CG------G------CGGCGGCGGCGGCACCCCGGGCATTATGACGGTGAACGGCTTCGAGAAGGGCCAGGAGGGCGGCG
GGCCGGCGGCGTGCGACGGCAAGTACCACAGCGACAAGGACATGATCGCGGCGCTGTCGACGCGGTGGTACGACGGCGGG
CGCAGGTGCCACAAGACGATCCGCATCACCAGCAAGCGCGACGGGCGCACCGTGGAGGCCCGGGTGGTGGACGAGTGCGA
CTCCAACCACGGCTGCAAGGACGACGTCGTCGACACCTCGGCCGCCGTGTGGGAGGCGCTCGGGCTCGACACCGACGTCG
GCGTCGTGCCCGTCACCTGGTCCGACGCCTGA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr1A_1023
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TCGCGGT------CGTGGCCATGCTTG
TGATCTTACTGCAGCTGTCCACGTTATCCGTGGCCCGG------CACCACGCCAAGCCGGACCCCTGCGTCGGCGAGGAC
GACT---CCGTCCCGGGCATGC------AGCACAAGCACAAGAAGCCCCACTGCCCGTCGCCGGGCGGCAACGGTGGTGG
CG------G------CGGCGGCGGCGGCACGCCTGGCGTGATGACGGTGAACGGGTTCCAGAAAAACGAAGACGGCGGCG
GGCCTTCGGAGTGCGACGGCAAATACCACAGCGACAAGGACATGATCGTGGCGCTGTCGACGAGGTGGTACGCGGGCGGA
CGCCGGTGCGGCAAGATGATCAACATCACCAGCAAGAAGAATGGGCGCACCGTGCAGGCCAAGGTGGTGGATGAGTGCGA
CTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAAGCCGTGTGGAAGGCGCTCGGGCTCGACAGCAACATCG
GCGAGGTGCCTGTCACATGGTCCGACGCCTGA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS------S-------S-----------S-----------S------------S---S-S------------------
--------------------------------------------------------------------------------
--------------S-------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------S---------------S------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
-----------------------------SSS------------------------------------------------
------------------------------------------------------S----------S--------------
-------------------------------------------------------------------S-----------S
----------S-------------SSSSSSSSSSSSSS---------------S-----S------SSS--SSSSSSS-S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS---S--------------------S--S------SS--S-S----------S-----
S---S-SS---------S-------S--S-----S------------------SS--------------S----------
---S--S----S-----------S----S----------------------S----------S------S------SS-S
S------------------------------S-------------S---------S---------SSS--S---------
-S---------------S---S-----S----------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-----------S----------------------------S--------
------------SSS
>forward_171
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AGCAATGTT
GATCCCGACGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>reverse_2087
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GGGGGTGTTTGGTTCAGAGA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
