>input_sequence_77498
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-------------------------ATCAATCCACCCAACTCCAAGCTCCTCACGATGGCATCTGCGACCAACACCAAGC
CCGGGGAGTTTGAGGAGGGGACATCAATGACGGCGGCCGATCTGTGCCGTTCCAAGTGCGTCGAGTTTGACGACCTCGGG
ATGATTCTCACTGCGACGCGCGGCGGCGAAGCGGTGGCCGAGGTGGTGCTCGAGGAGGACGGCGCCGGCGGAGGGGTGCT
CCGCGTGCTGCCCAGCGAGAGCTTCCTCGACGGGGAGCACCGCGTGCACGTGGTGGACGTGCAGGGCGAGCGGGAGGCCT
TCGTGCTGGTCGTGGAGGTCCGCGAGCGTGATGGGAGCATTGCCAGCGTGCGGAAGATCTCCTGATTCGCTTACGTTTGA
CGTCCGA--TTCCATTAGAGTCACAGTTAGAGCAAAACA--AGCCCTCCTTGTCGCACGTGCTTGCTATGTCGAACGAAA
ATGAAATCATGTTTTCAGTTAAAAA--TTTGTAGCAAATCATACTTTTGTTGTTTATTACATATCCTTAATT--------
-------AA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr7D_1_TraesCS7D01G268200
TCTGTTGTTTTTAACTACAGCTCCGGCTGCTCGGGGAGCAGAGTCGTGTGGAGCGGAGGGACTCCGAACAG---------
-------GCGGCTAGTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TGACCCTGTTCAGGTTTTCATACATT
GTTAATGGTTGCAAAACGGCAATCATGAGAAGTACTAGTACTACTTAGCGAAATCTTAGTGGCGCCAAGCTTGTGTGACA
TG--CATGCTAATGTTGGATTAATCATCGATAACGGTCCAAGCT--------CAAAGGGGAGGAGCAAAGAAGGCCTTCA
AGTAG------GCACAGGGGAGGATTGTGCTGACACTATGTTTACACACCTTCTTGTTCCTCTTC--CCCTTCTTCACAG
AAACTTCAAATTCTTCAAATGAAGTTCTAG--------------ATATCTGAATCTGGACTGAAAGTACGCCGCCATGGC
ATTTCCAGGTGATCCACCATGCATCCCTGTCAAATTCGCTCATTTA-ACTTATGAAAGT---------------------
------------GCATGCTTTTGATTCTTTGACCAAGTTTCCATGTTGCAAGTATCGTGCGGATTGACCATGATTGGAAG
ATCGGGGAAGGAAGACCTG--AGGGCAAAGCGTTGCTTCCAAGAAAGCGGCAACGATGCATCCGCTT-GCCGTACGACAT
TCTTGACAGTACTCGAATTGAGCGGCAAACTAGTCAGACATTTCCACCTAACGAAT------GCGTCATTTGGAACACAG
ATCGATTTGTGGATTAAAAAATGGACACGAATTTGCGCCTCAAAAATTCAATGAAAACTTTAAAAATTGCCCTCACGCAG
GATCGAACTACGGACCTTCAGTTTACAAGACTGACGCTCTACCACTGAGCTATAAGGGCTGTTTGTTCCTTAAG-TTGAT
TTCATG-TTTTAATACAAAG------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TCAGTCTGACCTCGACGCGAAAATCCAAGCCGAGCTTGGCACGAA
CTCGGAACTCCCAGCCCATATCGGATTCCACTTCTCCGGCGCGCCCCTGCCGGTTCCCTCCTTCGATCTACATAAGCGCA
CCACCCATGGCCTCTCCGTGTCTCCATCAATCCACCCAACTCCAAGCTCCTCACGATGGCATCTGCGACCAACACCAAGC
CCGGGGAGTTTGAGGAGGGGACATCAATGACGGCGGCCGATCTGTGCCGTTCCAAGTGCGTCGAGTTTGACGACCTCGGG
ATGATTCTCACTGCGACGCGCGGCGGCGAAGCGGTGGCCGAGGTGGTGCTCGAGGAGGACGGCGCCGGCGGAGGGGTGCT
CCGCGTGCTGCCCAGCGAGAGCTTCCTCGACGGGGAGCACCGCGTGCACGTGGTGGACGTGCAGGGCGAGCGGGAGGCCT
TCGTGCTGGTCGTGGAGGTCCGCGAGCGTGATGGGAGCATTGCCAGCGTGCGGAAGATCTCCTGATTCGCTTACGTTTGA
CGTCCGA--TTCCATTAGAGTCACAGTTAGAGCAAAACA--AGCCCTCCTTGTCGCACGTGCTTGCTATGTCGAACGAAA
ATGAAATCATGTTTTCAGTTAAAAA--TTTGTAGCAAATCATACTTTTGTTGTTTATTACATATCCTTAATT--------
-------AATTATGTGTGCTGTCATTTGGTATGATTATTGGGACGGCTCATAAAAGCAATGCGAAACAAAATATGTTGCG
CCAAAGCACAGCAATATTAACACGACTATGATCATCACGTGCTTGAAATTGCTCCTGCGTCTATTCATTTGCTTTTCATT
TTATTTTATACTCTCTCAATTTCGCAAAAAAAAAGTTA---CATTTTTACCAACGTGCAACCATCCTCAACTCCAAGTAC
TCTGTGTAAAAAAGCTGCAAACTAAAAACTGATCAGTCGAGTAAAGTTGCATACTTCCCGCAGAAAAAAGAGAGTAAAAG
TTTCGTA-CTTCAAATGGTACAATTGTTGGAAATATGAGCAAATTACTACGAGATTTAATCCGAATAAACAGAAGATAAA
TCATGATTACGGCAGCAGAGATTAAACTAATCATGTGAACTAGCATAGCAGATGAACAGATCACATCTAGGACACATACT
AGAAACATGAATTCTACCACGATCTCGAACAGGAAGGATAGAATCACATACGGTGCAGCGGGAGCAGCACCGCCGGCGTT
GACGTTGTCGCCCATGTCGTCGAGAATGAGGTTGCCGAGGTTGGGGAAGAAGTCGTCGTTCGCGAAGTCGTCGCTGCCAG
CAGTCGCGCGAGTGCGCTCCCCAAAACCCTGATCGCCCCTCTCTCGTACAGGATCACGAGAGGCGGGGTTCCGGAGGCCT
GCTGTCCCTTCTGCCGGTGCACGCCGAAAGGAGGGATGGAGAAGACTTGCTTGACGGCGCAATGATCTGGAACGGTGGTG
AGAAACCATACGAA---GCGGCGGCGGCTAGGGTAGACGTCTGCCTGACTATATAGTGCGGGCCGGGCAGGTCGTGGGAG
TAAACCCCACGTCCGAGTCGTCACGATCCAAAAGAATCGGAAATGGTTCAGCAATTAACGCGTTCGTTAATTACTAATTA
ATGACTCATTAATTTTTTTCCGAGTAGCAAAAATATAGACAACGTGCATAGCTGTG
>chr7A_1
TCTGCTTTTTTTAACTGCAGCTCCGGCTGCTCCGGGAGCAGAGTCGTGTGGAGCGGAGGGACTCGAGCGGCTAGTCTTTT
TTTTTTTGCGGGTAGTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TGACCCTGTTCAGGTTTTCACACATT
GTTAATGGTTGCAAAACCGCAATCATGAGAAGTACTAGTACTACTTGGCGAAATCTTAGTGGCGCCAAGCTTGTGGTGAC
ATGCCATGCTAATGTTGGATTAATCATTGATAACGGTCCAAGCT--------CAAAGGGGAGGAGCAAAGAAGACCTTCA
AGTAA------GCACAGGGGAGGATTGTGCTGACACTATTTTTACACACCTCCTTGTGTCCTCTTTTCCCTTCTTCACAG
AAACTTCAAATTCTTCAAATGAACACAAACAAATGAAGTTCTAGGTATCTGAATTTGGACTGAAAGTACGCCGCCATGGC
ATTTGCAGGTGATCCACCGTGCATCCGTGTCAAATTCGCTCATTTTGACTTATGAAAGT---------------------
------------GCATGCTTTTGATTCTTTGACCAAGTTTCCATGTTGCAAGTATCGTGCGGATTGACTAGGATTGGAAG
ATCGGAGAAGGAAGAAGATTCAGGGCAAAGCGTTGCTTCCAAGAAAGCGGCAACGATGCATGCACTTTGCCGTACGGCAT
TCTTGACAGCACTCAAATTGGGCGGCAAACTAGTCAGACAATTGTATTGCGCT--TAACGACGCACCATTCGAAACACAA
ATCGTTTTGCGCTTAAAAAAATGCACACGAATTTGCGCCTCAAAAATGAGGGCCACAAAACAAAAAGTGCCCTCACGCAG
GATCGAACTACGGACCTTCAGTTTACAAGACTGACGCTCTACCACTGAGCTATAAGGGCTACTTGTTGCACTGACTCGAT
TTCATA-TTTTAATGGGGTATGTCTAGGGCACATCTAGATGTGCTCTAATTATTGCCCATTTAAATGAGTGAATCAAGCA
CAAAAAAAAAATATTTACACGAATTTCAATGTAAGATCAATGACATAGGACTTAGATGTGCAATACTTATGGCACGTCTA
GATGTGCTTTAGCAAAACTGATTTTTAATACGTGATTCATCTTACCTCGACGCGAAAATCCAAACCGAGCAGAGCACGAA
CTCGGAACTCCCAGCTCGTATCGGATTCCACTTCTCCGGCGCGCCCCGGCCGGCTCCCTCATTCGATCTACATAAGCACA
CCACCCATGGCCTCTCCGGGTCTCCATCAATCCACCCAACTCCGAGCTCCTCACAATGGCGTCTGTGGCCGACTCCATGC
CCGTGGAGTTTGAGCAGGGGACAGCAATGACGGCGGCCGAACTCTGCCGTTCCAAGTGCGTCGAGTTTGACGACCTCGGG
ATGATCCTCACGGCGACGCGCGGCGGCGAGGCAGTGGCCGAGGTGGTGCTCAAGGACGACGGCGCCGGCGGAGGGGTGCT
CCGCGTGCTGCCCAGCGAGAGCTTCCTGGACGGCGGGCACCGCGTGCACGTGGTGGACGTGCAGGGCGAGCGGGAGGCCT
TCGTGCTGGTCGTGGAGGTCCAAGAGCATGACGGGAGCATTGCCAGCGTGCGGAAGATCTGCTGATTCGCTTATGTTGAG
ACGTCGGATTTCCATTAGAGCCACAGTTAGAGCAAAACA--AGCCCTCCTTGTCGCACGTTCTTGCTACGTCGAACGAAA
ATGAAATCATGTTTTCAGTTAATTA-TTTTGTAGC-AATCATACTTTTGTTGTTTATTA--TATCCTTAATT--------
-------AATTATGTGTGTTGT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr7B_41
----------------------------------------GAGTCGTGTGGAGCGGAGGGACTTCGAACAG---------
-------GCGGCTAGTTTGACCCTCTTCAGGTTTTCATACATTGTTAATGATTGCAAAACGGCAATCATGAGAAGTACTA
GTACTACTTAGCGAAAGTTCGAGTGGAGAAGCGAACGAGCGTGCGGCGCGCGAGCGGCGATGCGGCTTCGATGCGAGACG
CGAGAGGCGACGGCGCGATCGGAAAGAGGCTCTGTTACCAAGTTTGATTTAGGGTTGCGTGGGGCATAACCTCCACATAT
CTCGTATATATATAAGACCAACGATACAGAGTTAGATTACAATACGGCAGATACAAACCGTTTCCAACACCGCTGTTTTC
AACTGCAGCTCCGGAGTCGTGTGGAGCGGAGGGACTTCGAACAGGCGGCTAGTTTGACCCTCTTCAGGTTTTCATACATT
GTTAATGATTGCAAAACGGCAATCATGAGAAGTACTAGTACTACTTGGCGAAATCTTAGTGGCGCCAAGCTTGTGTAACA
TGG-CATGCTAATATTGGATTAATTATTGATAACGGTCCAAGCTCAAATCTGCACAGGCGAGGAGCAAAGAAGATCTTCA
ACTTCAAGCAAGCACCGGGGAGGATTGTGCTGACATTATTTTGACACGCCTCCTTGTTCCTCTCC--CCCTTCTTCTCGG
AAACTTCAAATA-TTCAAATGAACACAAACAAATGAAATTATACATATCTGAATTTGGACCGAAAGTACGCCGCCATGGC
ATTTACAGGTGATCCACTATGCATCCGTGTCAAATTCGCTCATTTTGACTTATGTTTTTTTTTTGAAACGGATCACTTTG
ACTTATGATACCGCATGCTTTTGATTCTTTGACCAAGTCTCCGTGT-----------TGCGGATTGACTACGATTGGAAG
ATCGGAGAAGGAAGATTCAGGGC------------------AGAAAGCGGGAACCATGCATGCACTT-GCCGTA-GGTAT
TTTTGACAGCACTCAAATTGGGCGGCAAACTAGTCAGACAATTGTATTGTGTACCTAACGACGCACCATTCGAAACACAA
ATCGATTTGTGCTTA--AAAATGCACACGAATTTGCACCTCAAAAACGAAAGCCACAA---AAAAAATGCCCTCACGCAG
GATCGAACTACGGACCTTCAGTTTACAAGACTGACGCTCTACCACTGAGCTATAAGGGCTGTTCGTTCATTTGG-TTGAA
TTTCTCCTTTTAATAGAAAC------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TTCTTCTGGCCTCGACGCGAAAATCCAGACCGATTAGGACAGGAA
CTCGGAACTCCCAGCTCGTATCGGATTCCACT--------------CTGCCGATTCCCTCCTTCGATATACATAAGCGCA
CCACCCATGGCCTCTCCGGGTCTCCATCAATCCACCCAACCCCGAGCTCCTCACGATGGCATCTGTGGCCGACTCCATGC
CCGTGGAGTTTGAGGAGGGGACAGCAATGACGGCGGCCGATCTGCGCCGTTCCAAGTGCGTCGAGTTTGACGACTTCGGG
ATGATCCTCACGGCGACGCGCGGCGGCGAGGCGGTGGCCGAGGTTGTGCTCAAGGACGACGGCGCCGGCGGC---GTGCT
CCGCTTGCTGCCCAGCGAGAGCTTCCTCGACGGCGGGCACCGCGTGCACGTGGTGGACGTGCAGGGCGAGCGGGAGGCCT
TCGTGCTGGTCGTGAAGGTCCAAGAGCATGACGGGAGCATTGCCAGCGTGCGGAAGATCTGCTGATGCGCTTATGTTTGA
CGTCCGA--TTCCATTAGAGTCACAGTTAGAGCAAAAAACGAGCCCTCCGTGTCGCACGTGCTTGCTATGTCGAACGAAA
ATGAAATCATGTCTTCAGTTAATTTTTTTTGTAGC-AATCATACTTTTGTTGTTTATTA--TATCCTTTTCAAAAAAAAT
CCTTGAAAATTATGTGTGTTGTCATTTGGTATGATTAATGGGACTGCTCATAAAAGCAATGCAAAACAAAATATGTTGCA
CCAAAGCACAGCAATATTAACACGACTATGATCATCACGTGCTTGAAATTGCTCCTGCGTCTATTCATTTGCTTTTCATT
TTATTTTATACTCTCTCAATTTCGCAAAAAAAAAAAGCTTCCATTTTTACCAACGTGCAACCATCCTCAACTCCAAGTAC
TTTGTGTAAAAAAGCTGCAAACTAACAACTGATCAGTCGAGTAAAGTTGCATACTTCCCGCGGAAAAAAGAGAGTAAAAG
TTTCATACCTTCCAATGGTACAATTGTAGG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr7D_1853
--------------------------------------------------------------------------------
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----------------------ATTGTTGGAAATATGAGCAAATTACTACGAGATTTAATCCGAATAAACAGAAGATAAA
TCATGACTACAGCAGCAGAGATTAAACTAATCATGTGAACTAGCATAGCAGATGAACAGATCACATCTAGGACACATACT
AGAAACATGAATTCTACCATGATCTCGAACAGGAAGGATAGAATCACATACGGTGCAGCGGGAGCAGCACCGCCGGCGTT
GACGTTGTCGCCCATGTCGTCGAGGATGAGGTTGCCGAGGTCGGGGAAGAAGTCGTCATTCGCGAAGTCGTCGCTGCCAG
CAGTCGCGCGAGTGCGCTCCCCAAAAACCTGATCGCCCCTCTCCCGTACAGGATCACGAGAGGCGGGGTTCCGGAGGCCT
GCTGTCCCTTCTGCCGGTGCACGCCGAAAGGAGGGATGGAGAAGACTTGCTTGGCGGCGCAATGATCTGGAACGGTGGTG
AGAAACCATACGAAGCGGCGGCGGCGGCTAGGATAGACGTCTGCCTGACTATATAGTGCGGGCCGGGCAGGTCGTGGGAG
TAAACCCCACGTCCGAGTCGTCACGATCCAAAAGAATCGGAAACGGTTCAGCAATTAACGCGTCCGTTAATTACTAATTA
ATGACTCATTAATTTTTTCCCGAGTAGCAAAAATATAGACAACGTGCATAGCTCTG
>chr3D_1853
--------------------------------------------------------------------------------
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----------------------ATTGTTGGAAATATGAGCAAATTACTACGAGATTTAATCCGAATAAACAGAAGATAAA
TCATGACTACAGCAGCAGAGATTAAACTAATCATGTGAACTAGCATAGCAGATGAACAGATCACATCTAGGGCACATACT
AGAAACATGAATTCTACCACGATCTCGAACAGCAAGGATAGAATCACATACGGTGCAGCGGGAGCAGCGCCGCCGGCGTT
GACGTTGTCGCCCATGTCGTCGAGGATGAGGTTGCCGAGGTCGGGGAAGAAGTCGTCGTTCGCAAAGTCGTCGCTGCCAG
CAGTCGCGCGAGTGCGCTCCCCAAAAACCTGATCGCCCCTCTCCCGTACAGGATCACGAGAGGCGGGGTTCGGGAGGCCT
GCTGTCCCTTCTCCCGGTGCACGCCGAAAGGAGGGATGGAGAAGACTTGCTTGGCGGCGCAATGATCTGGAACGGTGACG
AGAAACCATACGAA---GCGGCGGCGGCTAGGGTAGACGTCTGCCTGACTATATAGTGCGGGCCAGGCAGGTCGTGGGAG
TAAACCCCACGTCCGAGTCGTCACGATCCAAAAGAATCGGAAACGGTTCAGTAATTAACGCGTCCGTTAATTACTAATTA
ATGACTCATTAA-TTTTTCCCGAGTAGCAAAAATATAGACAACGTGCATAGCT---
>chr1D_1853
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------ATTGTTGGAAATATGAGCAAATTACTACGAGATTTAATCCGAATAAACCGAAGATAAA
TCATGACTTCAGCAGCAGAGATTAAACTAATCATGTGAACCAGCATAACAGATGAACAGATCACATCTAGGGCACATACT
AGAAACATGAATTCTACCACGATCTCGAACAGGAAGGATAGAATCACATACGGTGCCGCGGGAGCAGCACCGCCGGCGTT
GACGTTGTCGCCCATGTCGTCGAGGATGAGGTTGCCGAGGTCGAGGAAGAAGTCGTCGTTCGCGAAGTCGTCGCTGCCAG
CAGTCGCGCGAGTGCGCTCCCCAAAAACCTGATCGCCCCTCTCCTGTACAGGATCACGAGAGGCGGGGTTCCGGAGGCCT
GCTGTCCCTTCTGCCGGTGCATGCCGAAAGGAGGGATGGAGAAGACTTGCTTGGCGGCGCAATGATCTGGAACGGTGGTG
AGAAACCATACGAAGCGG---CGGCGGCTAGGGTAGACGTCTGCCTGACTATATAGTGCGGGCCGGGCAGGTCGTGGGAG
TAAACCCCACGTCCGAGTTGTCACGATCCAAAAGAATCGGAAACGGTTCAGTAATTAACGCGTCCGTTAATTATTAATTA
ATGACTCATTAATTT-TTCCCGAGCAGCAAAAATATAGACAACGTGCATAGCTCTG
>chr1D_1853
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------ATTGTTGGAAATATGAGCAAATTACTACGAGATTTAATCTAAATAAACAGAAGATAAA
TCATGACTACAGCAGCAGAAATTAAACTAATCATGTGAACTAGCATAGCAGATGAACAGATCATATCTAGGGAACATACT
AGAAACATGAATTCTACCACGATCTCGAACAGGAAGGATAGAATCACATACGGTGCAGCGGGAGCAGCACCGCCGGCGTT
GACGTTGTCGCCCATGTCGTCGAGGATGAGGTTGC-GAGGTCGGGGAAGAAGTCGTCGTTCGCGAAGTCGTCGTTGCCAG
CAGTCGCGCGAGTGCGCTCCCCAAAAACCTGATCGCCCCTCTCCCGTACAGGATCACGAGAGGCGGGGTTCCGGAGGCCT
GCTGTCCCTTCTGCCGGTGCACGCCGAAAGGAGGGATGGAGAAGACTTGCTTGGCGGCGCAATGATCTGGAACGGTGGTG
AGAAACCATACGAAGCGG---CGGCGGCTAGGGTAGACGTCTACCTGACTATATAGTGCGGGCCGGGCAGGTCGTGGGAG
TAAACCCCACGTCCGAGTCGTCACGATCCAAAAGAATTGGAAACGGTTCAGTAATTAACGCGTCCGTTAATTATTAATTA
ATGACTTATTATTTT-TTCCCAAGCAGCAAAAATATAGACAACGTGCATAGCT---
>chr1D_1853
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------ATTGTTGTAAATATGAGCAAATTACTACGAGATTTAATCCGAATAAACAGAAGATAAA
TCATGACTACAGCAGCAGAGATTAAACTAATCATGTGAACTAGCATAGCAGATGAACAGATCACATCTAGGGCACATACT
AGAAATATGAATTCTACCACGATCTCGAACAGGAAGGATAGAATCACATATGGTGCAGCGGGAGCAGCACCGCCGGTGTT
GACGTTGTCGCCCATGTCGTCGAGGATGAGGTTGCCGAGGTCGGGGAAGAATTCGTCGTTCGCGAAGTCGTCGCTGCCAG
CAGTCGCGCGAGTGCGCTCCCCAAAAACCTGATTGCCCCTCTCCCGTATAGGATCACGAGAGGCGGGGTTCCGGAGGCCT
GCTGTCCCTTCTGCCGGTGCACGCCGAAAGGAGGGATGGAGAAGACTTGCTTGGTGGCGCAATGATCTGGAACGGTGGTG
AGAAACCATATGAAGCGG---CGGCGGCTAGGGTAGACGTCTGCCTGACTATATAGTGCGGGCCGGGCAGGTCGTGGGAG
TAAACCCCACGTCCGAGTCGTCACGATCCAAAAGAATCAGAAACGGTTCAGTAATTAACGCGTCCGTTAATTATTAATTA
ATGACTCATTAATTT-TTCCCGAGCAGCAAAAATATAGACAACATGCATAGCTCTG
>chr4D_1853
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------ATTGTTGGAAATATGAGCAAATTACTACGAGATTTAATCCGAATAAACAGAAGATAAA
TCATGACTACAACAGCAGAGATTAAACTAATCATGTGAACTAGCATAGCAGATGAACAGATCACATCTAGGGCACATACT
AGAAACATGAATTCTACCACGAGCTCGAACAGAAAGGATAGAATCACATACGGTGCAGCGGGAGCAGCACCGCCGGCGTT
GACGTTGTTGCCCATGTCGTCGAGGATGAGGTTGCCGAGGTCGGGGAAGAAGTCGTCGTTCGTGAAGTCGTCGCTGCCAG
CAGTCGCGCGAGTGCGCTCCCCAAAATTCCGATCTCCCCTCTCCCGTACAGGATCACGAGAGGCGGGGTTCCGGAGGCCT
GCTGTCCCTTCTGTCGGTGCACGCCGAAAGGAGGGATGGAGAAGACTTGCTTGGCGGCGCAATGATCTGCAACGGTGGTG
AGAAACCATACGAAGCGG---CGGCGGCTAGGGTAGACGTCTGCCTGACTATATAGTGCGGGCCGGGCAGGTCGTGGGAG
TAAACCCCACGTCCGAGTCGTCACGATCCAAAAGAATCGGAAACGGTTCAGTAATTAACGCATCCGTTAATTATTAATTA
ATGACTCATTAATTT-TTCTCGAGCAGCAAAAATATAGACAACGTGCATAGCTCTG
>chr7D_1854
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TTGTTGGAAATATGAGCAAATTACTACGAGATTTAATCCGAATAAACAGAAAATAAA
TCATGACTACAGCAGCAGAGATTAAACTAATCATGTGAACTAGCATAGCAGATAAACAGATCACATCTAGGACACATACT
AGAAACATGAATTCTACCACGATCTCGAACAGGAAGGATAGAATCACATACGGTGCAGCGGGAGCAGCACCGCCGGCGTT
GACGTTGTCGCCCATGTCGTCGAGGATGAGGTTGCCGAGGTCGGGGAAGAAGTCGTCGTTCGCGAAGTTGTCGCTGCCAG
CAGTCGCGCGAGTGCGCTCCCCAAAAACCTGATCGCCCCTCTCCCGTACAGGATCACGAGAGGCGGGGTTCCGGAGGCCT
GCTGTCCCTTTTGCCGGTGCACGCCAAAAGGAGGGATGGAGAAGACTTGCTTGGCGGCGCAATGATCTGGAACGGTGGTG
AGAAACCATACGAAGCAG---CGGCGGCTAGGGTAGACGTCTGCCTGACTATATAGTGCGGACCAGGCAGGTCGTGGGAG
TAAACCCCACGTCCGAGTCGTCACGATCCAAAAAAATCGAAAACGGTTCAGTAATTAACGCGTCCGTTAATTATTAATTA
ATGACTCATTAATTT-TTCCCGAGCAGCAAAAATATAGACAACGTGCATAGCT---
>chr3D_1855
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------TGTTGGAAATATGAGCAAATTACTACGAGATTTAATCCGAATAAACAGAAGATAAA
TCATGACTACAGCAGCAGAGATTAAACTAATCATGTGAACTAGCATAGCAGATGAACAGATCACATCTAGGGCACATACT
AGAAACATGAATTCTACCACGATCTCGACCAGGAAGGATAGAATCACATACGGTGCAGCGGGAGCAGCACCGCCGGCGTT
GACGTTGTCGCCCATGTCGTCGAGGATGAGGTTGTCGAGGTCGAGGAAGAAGTCGTCGTTCGCGAAGTCGTCGCTGCCAG
CAGTCGCGCGAGTGCGCTCCCCAAAAACCTGATCGCCCCTCTCCCGTACAGGATCACGAGAGGCGGGGTTCCGGAGGCCT
GATGTCCCTTCTGCCGGTGCACGCCGAAAGGAGGGATGGAGAAGACTTGCTTGGCGGCGCAATGATCTGGAACGGTGGTG
AGAAACCATACGAAGCGG---CGTTGGCTAGGGTAGACGTCTGCCTGACTATATAGTGCGGGCCGGGCAGGTCGTGGGAG
TAAACCCCATGTTCGAGTCGTCACGATCCAAAAGAAACGGAAACGGTTCAGTAATTAACGCGTTCGTTAATTATTAATTA
ATGACTCATTAATTT-TTCCCGAACAGCAAAAATATAGACAACGTGCATAGCT---
>chr2D_1855
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------TGTTGGAAATATGAGCAAATTACTACGAGATTTAATCCGAATAAACAGAAGATAAA
TCATGACTACAGCAGCAGAGATTA-ACTAATCATGTGAACTAGCATAACAGATGAACAGATCACATCTAGGGCACATACT
AGAAACATGAATTCTACCACGATCTCGAACAGGAAGCATAGAATCACATACGGTGCAGCGGGAGCAGCACCGCCGGCGTT
GACGTTGTCGCCCATGTCGTCGAGGATGAGGTTGCCGAGGTCGGGGAAAAAGTCGTCGTTCGCGAATTCGTCGCTGCCAG
CAGTCGCGCGAGTGCGCTCCCTAAAAACCTGATCGCCCCTCTCCCGTACAGGATCACGAGAGGCGGGGTTCCGGAGGCCT
GCTGTCCCTTCTGCCGGTGCACGCCGAAAGAAGGGATGGAGAAGACTTGCTTGGCGGCGCAATGATCTGGAACGGTGGTG
AGAAACCATACGAAGCGG---CGGCGGCTAGGGTAGACGTCTGCCTGACTATATAGTGCGGGCCGGGCAGGTCGTGGGAG
TAAACCTCACGTCCGAGTCGTCACGATCCAAAAGAATCGGAAACGGTTCAGTAATTAACGCATCCATTAATTACTAATTA
ATGACTCATTAATTT-TTCCCGAGTAGCAAAAATATAGACAATGTGCATAGCTCTG
>SNPs
----S-S---------S---------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S-----------------------------S---
---------------------------S---------------------------------------------S------
----S----------------------------------S-----------S----------------------------
-----------------------SSSSS-S------------------------S-------------------------
----S---------------------S------------------S----------------------------------
--------------------------------------------------------------------S-S---------
-----S---------SSSS------------------------------------------S-S------------S---
---------S----S-----S-------------------S--SS-SSSSS-SSS---------SS----S-S------S
-----------SS-S--------S-----------------------SS--SSS-S-SSSS-----S-------------
-----------------------------------------------------------------------SS-------
-----S---------S---S------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------SSS------------------------S------SS--------
---------------S-S--------------------------------------------------------------
------------------S------------------------S---------------------S-S--S--S---S--
---S-------------------S--------------------------------------------------------
-----S-----S-----------------S---------------------S----S-----------------------
---------------------------------S-S--------------------------------------------
---------------------SS----S---S----------------------------S------------S------
--------------------------------------------------------------------------------
----------------------SS-----------S-----------------------SS-------------------
------------------S------------------S------S-----------------S----------------S
--------------------------------------------------------------------------------
----------------------------------SSSS------------------------------------------
-S-----------------------S-----------------------------------S------------------
----S-------S-------------------------------------------------------------------
------S---S---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S----------------S--------------------------------------
--------------------------S----------------S------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
------------------S----------------------------------S--
>forward_1504
--------------------------------------------------------------------------------
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--------------------------------------------CCTCGACGCGAAAATCCAAG----------------
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--------------------------------------------------------
>reverse_2762
--------------------------------------------------------------------------------
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-----------------------------------------TGGGGAAGAAGTCGTCGTTC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------
