>input_sequence_77496
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-----------------------------------------------------ATGTGGAGGCCCTCCATGAGCTCCTCC
AGCGACAGGTTGCCGTTCTTGTCCTTGTCCATGAGGTGGAACATCTGCACGTACTTGTCCAGCTCCTCCACCGGCATGTT
CCGCGCCACCACGCCCAGCGCCTTCTTCTTGAACTTGTTCATCGCCGAGAACTGCTGCAGCCGAGACCGCACCGCCTCGC
CCAAAGACACGTTCGGCGCCGTGTCCGCGTTCTTCAGCCACGGGTGCTCTGCCAATCACAATCACAATCACAATGCTTGC
GTTAATTCTACCTCCATCCGCTCCACATGCTAATTAGTACTAGTAGAAGTGCAATGGCGCAGTACCAAGAACTTGCGCGG
CCGTGAGCCGGGTGGCGGGGTCGGGGTCGAGCATCCGCCGTATGAGGTCCTTGGCGTTGCCGGACACCCTGGGCCAGGGC
TCCCGGTTGAAGTCGAGGCCGCCGCGGATGATGGCCTGCGCGATCTTCTCGTCGTTGTCCCCCCAGAAGGGCGGCACACC
GCAGAGGAGGATGTAG----------------------------------------------------------------
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>chr7B_1_TraesCS7B01G165300
TAATAGCATTGCATGCAATGAACTAACCACTGCATGTCGTGTTTGGTAGTTTCAAGTCATTAAAAGCATGGACACCTCTT
ATTTCTTATTGGTTGATATGTCAAGAAACAAAAAAGAGGTATAAGTTAATGCACCGCGCCTAAATGTTTTGGAATTATTT
GGTTTTCGTAAGATGACTTACACACCTAGACGGAGGAAGTAGGTGGTAACATCACACATCTCTAGGCAAAACAGATGATG
TGGCGAGTAATTAACGAGGAAAGAGAGATATGTTGTAACATAGATAGTTACTGTAACATCGCACATAGTACCAAAGACAA
GATGAGTCTACAACCTAATAAATGAAGTGTTCCATGACACATGTTACTAGTCATTGTGACTAGTCTTATACATCTAGAGG
GAGCGAGTAGTATAAGTTACTCCCCAATATGAAAGTAGTAGCATTTTTTGTGTGTGTGAGAAAATATCTTTCATTCATTT
C------TCGTCACTGCACAACCCCAGGTACGTCCATTTGTTCGTGCCTAAGTTGATCTCGTTAACTCTGCAGCTTACAT
GCACATAAAGAATCACATCTAGCCGTAGAACAAATTGAAT-------TCACGAGGAGGAAGTTTCTTCTTTGCATAGTTT
CCGGCTGAGGGTGCTGAAGTTGGCTCGCGAGAACTGGCGGGACGCGTTCCTCCAGTCCGCCCCGGACTTCATCATCAGCT
CGAACTCCTGGTAGCTGATGCGTCCGTCCCGGTCGGTGTCGACGTCGCGGATGATCTCGAGGATGGCCTGCTCGTTGGGC
CCCAGCTCCTGCCTCAGCTCGTCGATCTCGATGAAGCCGCTGCCGTCCTTGTCGAAGTAGCGGAACGCCGCCGCCAGGTA
CTTCTCGTTGGTCATCTTCTTGAGGTGCAGCGACACCGTCACGAACTCGTCGCAGTCCAGCGTCCCGTTGCCATCCGTGT
CCGCGGCTTCGAGCAGCATCCTGATCTCCGACTCCGGCACGCGCTGGCCGTTGATGTGGAGGCCCTCCATGAGCTCCTCC
AGCGACAGGTTGCCGTTCTTGTCCTTGTCCATGAGGTGGAACATCTGCACGTACTTGTCCAGCTCCTCCACCGGCATGTT
CCGCGCCACCACGCCCAGCGCCTTCTTCTTGAACTTGTTCATCGCCGAGAACTGCTGCAGCCGAGACCGCACCGCCTCGC
CCAAAGACACGTTCGGCGCCGTGTCCGCGTTCTTCAGCCACGGGTGCTCTGCCAATCACAATCACAATCACAATGCTTGC
GTTAATTCTACCTCCATCCGCTCCACATGCTAATTAGTACTAGTAGAAGTGCAATGGCGCAGTACCAAGAACTTGCGCGG
CCGTGAGCCGGGTGGCGGGGTCGGGGTCGAGCATCCGCCGTATGAGGTCCTTGGCGTTGCCGGACACCCTGGGCCAGGGC
TCCCGGTTGAAGTCGAGGCCGCCGCGGATGATGGCCTGCGCGATCTTCTCGTCGTTGTCCCCCCAGAAGGGCGGCACACC
GCAGAGGAGGATGTAGAGGATGACGCCGGCGCTCCACACGTCCACCTCCTGCCCGTAGTTACGCTTCAGGACCTCGGGGG
CCATGTAGTAGGCGCTTCCCACCACCTCCGTGAAGCGATCGCCGGGGTTGAAGAACACCGAGAGGCCGAAGTCGATGACC
TTGAGGGGGGCGTCCTCGGATTTGTTGGCGAACAGGAAGTTCTCCGGCTTGAGATCACGGTGGATCACCCCATTCGAATG
GCACAACTGCCACATTGGTTGAGCAGACATAGTTAGTTCGTCGCCTTCGTTGCGAGATTGGTGCGCAAGAACGTTGATCG
AGAAGCGTATTCAAGTGTTCTTGAACGAATCTTGCATGCGGATTGCGTACCTGGATGACGTTGACGATGGTGCGGAAGAC
CTTGGCGGCGGCGCGCTCGGAGTAGTGGCCGCGGGCGACGATGCGGTCGAAGAGCTCGCCGCCCTCGCAGAGCTCCATGA
CGAGGTGCACGGAGCCTTCCTGGTCCTCGCGGGCCTCTCGCAGCCGCACAACGGCCGTGCCACCGCGG------GCCGAC
ATGCGTCGCATGATGGCCACCTCCCTCCGCACGTCGGCCGCGTGCGCCGCGGC---GGCGGCGGCGGCTCTCGCGGCGGC
TTCCGCGCCCCCGCCACCCGCGGCCTTGCGGTTCGCCCCGCGGCCGCCCCGGCGGCGGTGCCTCCGGATGGTTTTGCACG
CGAGCGCCTCGCCCGTGGCGGCGTCCTTGCAGCGGCGCGTCACCCCGAACTCACCCCGGCCCAGCTCCTTTCCCAGCACG
TAGCGCCGCCCGAACTCGGCGGTCGTCGTCTTGGCCACGAGCTCCTCCTCCTCGGTGCCGCCGGCGGGGCCGTCACCATT
ATTGCGCCTGGAGCTGCCGTTGTCGCCCTTCTT------------------------GGCGCTGCTGGTGCTGGCCCCGG
AGGCGGCGTTGGCGGCGGCGGCGTCGCGTTCGGTGACGGGGAGGACGAAGGAGAGGTTGCCGAGGCGGCCGCGCAGCTTC
CGCGAGCAG
>chr7D_442
CATTT---------------------------------------------------------------------------
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-----------------------------------------------TTTTGTGTGTGAGAAAATATCATTCATTCATTT
C------TTGTCACTGCACAACCCCAGGTACGTCCATTTGTTCGTGCCTAAGTTGATCTCGTTAACCCTGCAGCTTACAT
GCACAAAAAGAATCACATCTAGCAGTAGAACAAATTGAAT-------TCACGAGGAGGAAGTTTCTTCTTTGCATAGTTT
CCGGCTGAGGGTGCTGAAGTTGGCCCGCGAGAACTGGCGGG------TCCTCCAGTCCGCCCCGGACTTCATCATCAGCT
CGAACTCCTGGTAGCTGATGCGTCCGTCCCGGTCGGTGTCGACGTCGCGGATGATCTCGAGGATGGCCTGCTCGTTGGGC
CCCAGCTCCTGCCGGAGCTCGTCGATCTCGATGAAGCCGCTGCCGTCCTTGTCGAAGTAGCGGAACGCCGCCGCCAGGTA
CTTCTCGTTGGTCATCTTCTTGAGGTGCAGCGACACCGTCACGAACTCGTCGCAGTCCAGCGTCCCGTTGCCGTCCGTGT
CGGCGGCCTCGAGCAGCATCCTGATCTCCGACTCCGGCACGCGCTGGCCGTTGATGTGGAGGCCCTCCATGAGCTCCTCC
AGCGACAGGTTGCCGTTCTTGTCCTTGTCCATGAGGTGGAACATCTGCACGTACTTGTCCAGCTCCTCCACCGGCATGTT
CCGCGCCACCACGCCCAGCGCCTTCTTCTTGAACTTGTTCATCGCCGAGAACTGCTGCAGCCGAGACCGCACCGCCTCGC
CCAGCGACACGTTCGGCGCCGTGTCCGCGTTCTTCAGCCACGGGTGCTCTGCCAATCACAATCACAATCACAATGCTTGC
GTTAGTTCTACGTCCATCCACTCCACGTGCTAATTAG---TAGTAGAAGTGCAATGGCGAAGTACCAAGAACTTGCGAGG
CCGTGAGCCGGGTGGCGGGGTCGGGGTCGAGCATCTGCCTGATGAGGTCCTTGGGGTTGCCGGACACCCTGGGCCAGGGC
TCCCGGTTGAAGTCGAGGCCGCCGCGGATAATGGCCTGCGCGATCTTCTCGTCGTTGTCCCCCCAGAAGGGCGGCACACC
GCAGAGGAGGATGTAGAGGATGACGCCGGCGCTCCACACGTCCACCTCCTGCCCGTAGTTACGCTTGAGGACCTCGGGGG
CCATGTAGTAGGCGCTCCCCACCACCTCCGTGAAGCGATCGCCGGGGTTGAAGAACACCGAGAGGCCGAAGTCGATCACC
TTGAGGGGGGCGTCCTCGGATTTGTTGGCGAACAGGAAGTTCTCCGGCTTGAGATCACGGTGGATCACCCCGTTCGAATG
GCACAACTGCCACATTGGTTGAGCAAACTTGGTTAGTTCGTTGCCTTCGTTGCGATATTGGTGCGCAAGAACGTCGATCG
AGAAGCTTGTTGAGGTGTTCTTGAACGAATCTTGCATGCGGGTTGCGTACCTGGATGACGTTGACGATGGTGCGGAAGAC
CTTGGCGGCGGCGCGCTCGGAGTAGTGGCCGCGGGCGACGATGCGGTCGAAGAGCTCGCCGCCCTCGCAGAGCTCCATGA
CGAGGTGCACGGAGCCTTCCTGGTCCTCGCGGGCCTCCCGCAGCCGCACAACGGCCGCGCCGCCGCGG------GCCGAC
ATGCGCCGCATGATGGCCACCTCCCTCCGCACGTCGGCCGCGTGCGCCGCGGCCGCTGCGGCGGCGGCTCTCGCGGCGGC
TTCCGCGCCCCCGCCACCCGCGGCCTTGCGGTTCGCCCCGCGGCCGCCCCGGCGGCGGTGCCTCCGGATGGTCTTGCACG
CGAGCGCCTCGCCCGTGGCGGCGTCCTTGCAGCGGCGCGTCACCCCGAACTCCCCGCGGCCGAGCTCCTTCCCGAGCACG
TAGCGCCGCCCGAACTCGGCGGACGTCATCTTGGCCACGAGCTCCTCCTCCTCGGTGCCGCCGGCGGGGCCGTCACCATT
GTTGCGCCTGGAGCTGCCGTGGTCGGCCTTCCTGGCGGAGCTGTCCGAGCCCGCGCGGGCGCTGCTGGTGCTGGCCCCGG
AGGCGGCGTTGGCGGCGGCGGCGTCGCGTTCGGTGACGGGGAGGACGAAGGAGAGGTTGCCGAGGCGGCCGCGCAGCTTC
CGCGAGCAG
>chr7A_444
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-------------------------------------------TTTTTTTTGTGTGTGAGAAAATATCATTCATTCATTT
CCAGTTCTTGTCACTGCACAACCCCAGGTACGTCCATTTGTTCGTGCCTAAGTTGATCTCGTTAACTCTGCAGCTTACAT
GCACAAAAAGAATCACATCTAGCGGTCGAACAAACTGAATTCACGAATCACGAGGAGGAAGTTTCTTCTTTGCATAGTTT
CCGGCTGAGGGTGCTGAAGTTGGCTCGCGAGAACTGGCGGGACGCGTTCCTCCAGTCCGCCCCGGACTTCATCATCAGCT
CGAACTCCTGGTAGCTGATGCGTCCGTCCCGGTCGGTGTCGACGTCGCGGATGATCTCGAGGATGGCCTGCTCGTTGGGT
CCCAGCTCCTGCCGGAGCTCGTCGATCTCGATGAAGCCGCTGCCGTCCTTGTCGAAGTAGCGGAACGCCGCCGCCAGGTA
CTTCTCGTTGGTCATCTTCTTGAGGTGCAGCGACACCGTGACGAACTCGTCGCAGTCCAGCGTCCCGTTGCCGTCCGTGT
CCGCGGCCTCGAGCAGCATCCTGATCTCCGACTCCGGCACGCGCTGGCCGTTGATGTGGAGGCCCTCCACGAGCTCCTCC
AGCGACAGGTTGCCGTTCTTGTCCTTGTCCATGAGATGGAACATCTGCACGTACTTGTCCAGCTCCTCCACCGGCATGTT
CCGCGCCACCACGCCCAGCGCCTTCTTCTTGAACTTGTTCATCGCCGAGAACTGCTGCAGCCGAGACCGCACCGCCTCGC
CCAGCGACACGTTCGGCGCCGTCTCCGCGTTCTTCAGCCACGGGTGCTCTGCCAATCACAAACACAAT------GCCTGC
GTTAGTTCTACGTCCATCCACACCACGTGCTAATC------AGTAGAAGTGCAATGGTGCGGTACCAAGAACTTGCGCGG
CCGTGAGCCGGGCGGCGGGGTCGGGGTCGAGCATCCCCCTGATGAGGTCCTTGGCGTTGCCGGACACCCTGGGCCAAGGC
TCCCGGTTGAAGTCGAGGCCGCCGCGGATGATGGCCTGCGCGATCTTCTCGTCGTTGTCCCCCCAGAAGGGCGGCACACC
GCAGAGGAGGATGTAGAGGATGACGCCGGCGCTCCACACGTCCACCTCCTGCCCGTAGTTGCGCTTGAGGACCTCGGGGG
CCATGTAGTAGGCGCTCCCCACCACCTCCGTGAAGCGATCGCCGGGGTTGAAGAACACCGAGAGGCCGAAGTCGATCACC
TTGAGGGGGGCGTCCTCGGATTTGTTGGCGAACAGGAAGTTCTCCGGCTTGAGATCACGGTGGATCACCCCGTTCGAATG
GCACAACTGCGTTCGAATGGAAAC--------TTAGTTCGTCGCCTTCGTTGCGAGATTGGTGCGCAAGAACGTTGATCG
AGAAGCGTGTTGAGGTGTTCTTGAACGAATCTTGCATGCGGGTTGCGTACCTGGATGACGTTGACGATGGTGCGGAAGAT
CTTGGCAGCGGCTCGCTCGGAGTAGTGGCCGCGGGCGACGATGCGGTCGAAGAGCTCGCCGCCCTCGCAGAGCTCCATGA
CGAGGTGCACGGAGCCTTCCTGGTCCTCGCGGGCCTCTCGCAGCCGCACAACGGCCGAGCCACCGCGG------GCTGAC
ATGCGCCGCATGATGGCCACCTCCCGCCGCACGTCGGCCGCGTGCGCCGCCGCGGCGGCGGCGGCGGCTCTCGCGGCGGC
CTCCGCGCCCCCGCCACCCGCGGCCTTGCGGTTCGCCCCGCGGCCGCCCCGGCGGCGGTGCCTCCGGATGGTCTTGCACG
CGAGCGCCTCGCCCGTGGCGGCGTCCTTGCAGCGGCGCGTCACCCCGAACTCCCCGCGGCCGAGCTCCTTCCCCAGCACG
TAGCGCCGCCCGAACTCCGCGGACGTCATCTTGGCCACGAGCTCCTCCTCCTCGGTGCCGCCGGCGGGGCCGTCGCCATT
GTTGCGCCTGGAGCTGCCGTGGTCGCTCTTCTTGGAGGAGCGGTCCGAGCCCGCGCGGGCGCTGCTGGTGCTGGCCCCGG
AG---------GCGGCGGCGGCGTCGCGTTCGGTGACGGGGAGGACGAAGGAGAGGTTGCCGAGGCGGCCGCGCAGCTTC
CGCGAGCAG
>chr5A_1488
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------------------------------------------------------------CCCCAGAACGGAGGCACTCC
GCAGAGTAGGATGTAGAGGATGACGCCGGCGCTCCAGACGTCGGCCTCCGGGCCGTAGCTCCTCATGAGCACCTCCGGCG
CCATGTAGATCCCGCTGCCGACCACCTCGGTGAAGCGCTCCCCGGGCTCGAAGTAGACGGAGAGGCCGAAGTCGATGGCC
TTGAGCGGCGAGTCCTCGGCCTTGCCGGCGAAGAGGAAGTTCTCGGGCTTGAGGTCCCGGTGCATGACCCCGTTGTCGTG
GCACAGCTGCAC--------------------------------------------------------------------
--------------------------------------------------------GACGTGGGCGATGGTGCGGCCGAT
CTTGGCGGCGGCGCGCTCCGTGTAGTGGCCCCGGGCGAAGATGCGGTCGAAGAGCTCGCCGCCCTCGCACAGCTCCATCA
CCAGGTGCACGCCCTCGG---GGTCCTCGCAGGCCTCGCGGAGCCGCACCACGGCGCCGCCCGCTCCCTCGAGCGCCGAC
ATGCGCCGCAGGATCTCCACCTCCCGCCGCACGTCCT-------CGGCGTCGGCGGCGCGGCGCAGGCGCTTGCGGCGG-
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>SNPs
S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S------------------S-----------
--------S-----------------------------------------------------------------------
-----S-----------------S--------------------------------------------------------
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-------------SS-----------------------------------------------------------------
------------------------------------------------------------------------S-------
-------S------------------------------------------------------------------------
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---SS---------------------------------------------------------------------------
----S------S-------S------S----------SSS----------------------------------------
---------------------------------------SS---------------------------------------
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------------------------------------------------------------------S-------------
----------------S---------------------------------------------------------------
-----------------------------------------------------------------------S--------
-------------------------S--S-S-------------------------------------------------
--------S--S-S---------------------------S--------------------------------------
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---------------------------------------------------------S----------------------
-----S--------------------------------------------------------------------------
------------------------------------------------------------------------S-------
----------------------------------------------------S--S-----S--------S---------
----------------------S----S----------------------------------------------------
S-------------------S-----------------------------------------------------------
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>forward_46
--------------------------CCACTGCATGTCGTGTTTGG----------------------------------
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>reverse_1401
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----------------------------------------TATGAGGTCCTTGGCGTTGC--------------------
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>forward_152
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----------------------------------------------------ACCGCGCCTAAATGTTTTGG--------
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>reverse_1882
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-----------------------------------------ATTGCGTACCTGGATGACGT-------------------
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