>input_sequence_77475
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--------------------------------------------ATGGGTCCTTGCGGCGGTGGTGGCGGCAAACCATGG
AAGATGGACATGCGTGGTGTCAACCGTATCATTAAGGTGGTTGTTCGCCACGGCGCCGCGGTCGACGCCATGTCGGTGTT
GTATGAGCGGGATGGCCAGAAGGAAAAGACCAAGCTGTGGGGAGGATCTGGGGGCAAGCGCTCGGAGGTACAAGTTACGC
TTGCAACAACCATCATATTTCTTCATGTGGATGGGTGTCACTTTGTGAATGACTTGATAGTGACAAATAAATTCATTTTT
GGCATGTCTAGATCTGTTTGGAGCCAGGAGAGCACTTGACAAACATCAGAGGCCACTACGGCTTCTTTAACGGCTGGTTC
GTGATCAGGTCGCTCACTTTTGTGAGCAACCGCCGCACTTTTGGGCCGTACAGGGAGGAGACAGGCACGGCATTCAAGCT
CCCAGGAGCCGGCGGCAAAATTCTTGGCTTCCACGGGCGTTCGGAAGGCCTCCTGGACGCTCTTGGCACATATGTCAAGA
TGGGCTAG------------------------------------------------------------------------
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>chr6A_1_TraesCS6A01G105700
CTAAAACATCTTATATGTAGGAACAGTGGGAGTACATGTGTAATTTTGTATTGCTTGGCATTGCGTTGATTACTATTTCT
TCTTCGATTATTGAGGATTTTTTTATTTCCAGCTCTGCAGCCTCCTCAAATTTTTTTCATTCCTAGCTTCGGATGAAGTA
TTCGAAAAATTCCTTCACAACCTCCTCATCACCCTGTTCTGCATTGACTCTCTGCTTCATGGACGATATTTTCTCTTTAT
ACTTTTCACCGAGCAGTTTTGGTATAAGCACTTTGCACAGATCATTTGAAATGCCTTTCATCAGATTTTTTTTCCCCTAG
CATGTATCCTTTTTAAATACAGCTCTAGTTTAACATTTCTTGTCAAACCATTCTAGTGTGAATTTGCGACCTGTACAGCG
TTTCCAAGTTACCCCATGATTATAAGTTTCAGCAATTAAACTTT-ACTTTTCAGCATTCAGTTTCGCAAATAATCATGCT
CATAAAGTATAGCACATTTTCTTTCTTATATACAGTGGGAAACTTCTGATATTCTTCATCCGCATCTTCTTTGTTCGACC
TGCTATGTGGAGCTCCCGGAGAAGAACAAGTCTGGCTGCACCCGGTGCTTCGCAGTAGAGCGTATACTGCAGTCTATCCA
GGTCCTTTGCCCCTATGCGGAGTATGGCTGCACAGCCAAGATGCCCTACCATGAGATGGAGGAGCATGAGATGAAGTGCA
TGCACGCGCCATGCTTCACTGGATCAAACGAAGGGCAGCCCATGGCCCTGCACGATGGGTTACCGTCGGACTCTTAGACT
TTTGTTATCCAAAATGTATTTCGCATCAATATCAATATCAACAATCATGAGAGCAAGAAGAA---GCATGATAAGAAGAG
TTCCACTTGTGATAATCAGTGCTCAACGGTAATTGTGTATCTAATGTAGAAAAATTATGATAGCTTCAATCTGGCTAGGC
ACCTCCTGACGCTTGTTTCTCAAATGCAGGGGTCGGTTGTGAAAATGGGTCCTTGCGGCGGTGGTGGCGGCAAACCATGG
AAGATGGACATGCGTGGTGTCAACCGTATCATTAAGGTGGTTGTTCGCCACGGCGCCGCGGTCGACGCCATGTCGGTGTT
GTATGAGCGGGATGGCCAGAAGGAAAAGACCAAGCTGTGGGGAGGATCTGGGGGCAAGCGCTCGGAGGTACAAGTTACGC
TTGCAACAACCATCATATTTCTTCATGTGGATGGGTGTCACTTTGTGAATGACTTGATAGTGACAAATAAATTCATTTTT
GGCATGTCTAGATCTGTTTGGAGCCAGGAGAGCACTTGACAAACATCAGAGGCCACTACGGCTTCTTTAACGGCTGGTTC
GTGATCAGGTCGCTCACTTTTGTGAGCAACCGCCGCACTTTTGGGCCGTACAGGGAGGAGACAGGCACGGCATTCAAGCT
CCCAGGAGCCGGCGGCAAAATTCTTGGCTTCCACGGGCGTTCGGAAGGCCTCCTGGACGCTCTTGGCACATATGTCAAGA
TGGGCTAGGTATGGACATCTCCTCTCATGACTGGGGAGGGGATATTTGAGGACTCGGGATGCTATGTAATGCTTAATCTA
GGTAGGTGCTTACTCTGAACTCTGTTATGTGATGCGTTTCTTTTGCTTCTGCTGTATCGCATTCGCATGTTGGTTGATGA
AGGAACATCCCGTAGAGTGAATGCTATACATAAACTAGATGCTTGAAACCTGGTGCTCGTTTCCTAGTTTGATCGAGTGA
ATGTAATGACTAATGAGGACAGGTAGACTGTGTGTTTGCTACTGTTAAAGCATGAACCTCGAACAGTCTGGTTCGTGCTG
AATTGCTGATGTTCTAAACTAATAGGGGTTCCGGCTGATGTAAGATGTAACATGCATTTTTCAGAAGCGGCAGGCCTGAT
GTAGCAGAAGAACATACCACATCCGCAGCTCCACACATTCAGTAGGATACGAATACGACC-ACTTGCATTGCATGACAGA
TCTTATTGCAACAGGCCAGGTTCAGCGTGTATAAACGGTGTTTGATCTAAAAGTACGCCTTTGTTGAGCGTCACAACAGC
TTCACCTCATTGTCCTTGAAGAAGTAACGTTTACACTTGTGCTTGATCATCTCGAGGCTTCCTTGCCCAACATCCTTGAC
AACTTCCACACCGGCGAGCAACGCAATGCTCTCAAATCTCAAGTTCCTCCGCTTAATTCTTCTGAAGAACCTCGCGACAC
AGAACTTGCCAGAGCCCAGCGGCAAGATGTGCTCCCCCGTAGGGATCCATGCCTCTGGAGGTGGCAGAT-------CTTC
TTCCCACACGTGCACCAGGGCCGGCGCCGCCGTCGCCT---GCGTCATGTCGGCGGCGCAGAGCTTCCCGTCGCTGGCCG
AGAAGCCAAACCAGAGGCTGTGCTCTGGGGCGTACACCGCACGGTCTTTGAATGGCAGTGCCCACTCGCCGGCCTTGCTC
CACACGCCGTTCTTTACGTTCGAACGAGTACGTGCCGGTGGTCGTCGGGATCGAGAGGC
>chr6B_355
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----------------------------------ATTTCTTGTCAAAGCATTC-AGTGTGAATTTGCGACCTGTACAATG
TTTCCAAGTTGCCCTATGATTATAAGTTTCAGCTATTAAACTTTTACTTGTCAGCATTCAATTTTACAAATAATCAGGCT
CATAAAGTATAGCACATTTTCTTTCTTATATACAGTGCGAAACTTCTGATATTCTTGACCCGCACCTTCTTTGTTCGACC
TGCTATGTGGAGCTCCTGGAGAAGGACAAGTCCTGCTGCAACCGGTGCTTCGCAGTAGAGCGTATACTGCAGTCTGTCCA
GGTCCTTTGCCCCTACGCGGAGTATGGCTGCACAGCCAAGATGCCCTACCATGAGATGGAGGAGCATGAGATGAAGTGCA
TGCACGCGCCATGCTTCACTGGATCAAACAAAGTGCAGCCCATGCCCCTGCACGATGGGTTACCATCGGATTCTTGCACG
CTTGTTATCCAAAATGTATCTCGCGTCAATATCAACATCAACAATCGTGAGCGCAAGAAGAAGATGCATGATAAGAGGAG
TTCAAATTGTGATAATCAGTGCTCAGCGGTAATTGTGTAACCAGTGTAGAAAAACTATGATAGCTTCAATCTGGCTAGGC
ACCTCCTGACGCTTGTTTCTCAAATGCATGGGTCGGTTGTGAAAATGGGTCCTTGCGGCGGTGGTGGCGGCAAACCATGG
AAGATGGACATGCGTGGTGTCAACCGTATCATTAAGGTGATTGTTCGCCACGGCGCCGCGGTCGACTCCATGTCGGTGTT
GTATGAGCGGGGTGGCCAGAAGGAGAAGACCAAGCTGTGGGGAGGATCTGGGGGCAAGCGCTCTGAGGTACAAGTTACAC
TTACAACAACCATCATATTTCTCCATGCGGATGGGGGTCACTTTGTGAATGACTTGATAATGACAAATAAATTA--TTTT
GGCATGTATAGATCTGTTTGGAGCCAGACGAGCACTTGACAAACATCAGAGGCCACTACGGCTTCTTTAACGGCTGGTTC
GTTATCAGGTCGCTCACTTTTGTGAGCAACCGCCGCACTTTTGGGCCGTACGGGGAGGAGACAGGCACTGCATTCAAGCT
CCCAGGAGCCGGCGGCAAAATCCTTGGCTTCCACGGGCGTTCGGAAGGCCTCCTTGACGCTCTTGGCACATATGTCAAGA
TGGGCTAGGTATGGACATCTCCTGTCAAGACTGGGGAGGGGATATTTGAGGACTCGGGATGCTATGTAATGCTTAATCTA
TGTAGGTACTTACTCTGAACTCTGTTATGTGATGCGTTTCTTTTGCTTCTGCTGTATCGCATTTGCATGTTGGTTGATGA
AGGAACATCCCGTGGAGTGAATGCTAAACATAAACTAGATGCTTGAAACCTGGTGCTCGTTTCCTAGTTTGAACGAGTGG
ATGTAGT------------------GACTGTGTGTTTGCTACTGTTAAAGCATGAATCTGGAACATTCTGGTTCGTGCTG
AATTGCTGATGTTCTAAACTAGTAGGGGTTCCGGCTGATGTAAGATGTAACATGCATTTTTCAGAAGCGGCAGGCCTGAT
GTAGCAGAAGAACATACCACATCCGCAGGTTCTTATCGCAACATGTAAGATGTAAGATGTAAC-----TTGCATGGCAGA
TCTTATGGCAACATGCCAGGTTCAGAGTGTATAACCGGTGTTTGATCTAAAAGTACGCTTTTGTTGAGCGTCACAACAGC
TTCACCTCATTGTCCTTGAACAAGTAACGTTTACACTTGTGCTTGATCATCTCGAGGCTTCCTCGGCCGACATCCTTGAC
AACTTCCACACCGGCGAGCAACGCAATGCTCTCAAATCTCAAGTTCATCCGCTTAATTCTTCTGAAGAGCCTCGCGACAC
AGAACTTGCCAGAGCCCAGCGGCGAGATGTGCTCCCCCGTAGGAATCCATGCCTCTGGAGGAGGCAGATCTTCTATCTTA
TTCCCACACGTGCACCAGGGCTGGCGCCGCCGTCGTCGTCAGCGTCATGTCCGCTGCGCAGAGCTGCCCGTCGCCGGCCG
AGAAGCCAAACCAGAGGCCGTGCTCTGGGGCGTACACCGCACGGTCTTTGAACGGCAGTGCTCACTCGCCTGCCTTCCTC
CATGCGCCGTTCTTTACGT-CGAACGAGTACGTGCCGG---------------------
>chr6D_1869
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--------------------------------GGCTAATGCTACATGTAACATGCCTTTTCCAGGAGCGGCAGGCTTGAT
GTAGCAGAACAATATACCACACCCACAGCTCCACACATTCAGTAGGATAGGAATACGACC-AC-----TTGCATGACAGA
TCTTATTGCAACAGGCCAGGTTCAGACTGTATAAACGGTGTTTGATCTAAAAGTACGCTTTTGTTGAGCGTCACAACAGC
TTCACCTCATTGTCCTTGAAGAAGTAACGTTTACACTTGTGCTTGATCATCTCGAGGCTTCCTTGCCCAACATCCTTGAC
AACTTCCACACCGGCGAGCAACGAAATGCTCTCAAATATTAAGTTCCTCCGCTTATTTCTTCTGAAGAGCCTCGCGACAC
AGAACTTTCCAGAGCCCAGCGGCAAGATGTGCTCCCCCGTAGGGATCCATGCCTCTGGAGGTGGCAGATCTTCT------
-TCCCACACGTGCACCAGGGCCGGCGCCGTCGTCGCCT---GCGTCATGTCGGCGGCGCAGAGCTGCCCGTCGCTGGCCG
AGAAGCCAAACCAGAGGCCGTGCTCTGGGGCGTACACCGCACGGTCTTTGAATGGCAGTGCCCACTCGCCGGCCTTGCTC
CACACGCCGTTCTTTACGT-TGAACGAGTATGTGCCGG---------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-----S-----------------------SS-
----------S---S------------------S---------------S----------S---SS----------S---
-------------------------------------S------------------S-S-----S---------------
----------------S-------S-------SS------S----------------------------------S----
---------------S----------------------------------------------------------------
-----------------------------S---S----------S-------------------S-----S----SS--S
S------------------S----S----------S----------S----S------------------------S---
---S-S-------------------S-------------S-S-S----------S-------------------------
----------------------------S---------------------------------------------------
---------------------------------------S--------------------------S-------------
-----------S------------S--------------------------------------S--------------S-
--S-------------------S----S-------S-----------------------S-------------SSS----
-------S-------------------SS---------------------------------------------------
--S------------------------------------------------S----------------S-----------
---------------------S--------------------------------S-------------------------
-----------------------S---S----------------------------------------------------
S------S-------------------------------------------------------S----------------
-------------S------------S---------------------------------------------S------S
-----S-SSSSSSSSSSSSSSSSSS-------------------------------S--S-----S--------------
---------------------S----------------------------------------------------------
-------------------------------------------------S-------------SSSSS------------
-------------------------S--------------------------------S---------------------
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--------------------------------------------------------------------S-----------
-------------------------------------------------------------------------------S
-----------------------------------------------------------------S--------------
------------------S-------------------------------------------------------------
-------------------S------------------SSSSSSSSSSSSSSSSSSSSS
>forward_656
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----------------------------------------------------------------------------TCCA
GGTCCTTTGCCCCTAT----------------------------------------------------------------
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>reverse_1544
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-----------------------CTCATGACTGGGGAGGGGAT-------------------------------------
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