>input_sequence_77413
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----ATGGGGTCCATCCTGTGCTGCCTGTGCGGTCCCGACGACGATGACGAGGCGCCGGGTTGCTGCGCCTGCCTGCCAT
GGCCAGCCAGAGCGTACA---------------------------------------------CACGGGTTGCGCCGGTT
CCTCCCGAGGCCTCCACCGGCTCAGGGCAGGAGGATCCATTGAACACCTTCCGCCCCCCTCCTAGGGCTCTACCTTACGA
TGATCCTCGGTTCAGACATCACACGGAGAAATCTATTCTGCTCGGAGAGAGAAGCAATGCTGACACCGGATCGACTCGCG
ATGGTGATGAGAAGGCTGATGGACCGTCAA---TGGAAGCTCAGCCGGGAGGGGGGAAACCCAGGGGAACTCAAGTCTGT
GTTGATTGTGACGAGGATGACTGCCCGATATGCCTTGAGGAGTATGACTACGAGAATCCGAAGATACTGCTGCAATGCAA
CCATGATTTCCATCTTGGTTGCATCTACGCGTGGATGGAGAGAAGCCAGTCTTGCCCGGTCTGTGCCGTCGTAATGGTGT
TCAAAGAGGACCAA--------TGA-------------------------------------------------------
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>chr2D_1_TraesCS2D01G176300
AGCGTAGAAAGACTATATAGTACTCCATCCGTC-----CGGAGAAATGGATAAAAATGGCCGTACTGTAGGTGTTCTACA
TCAATTTTGTAAGATATATACCATACATCAAATTTCGTAATATTTAATTTGATGGGGTATGGGTAGAATAAGGCAAGGAA
AGTTTTGCCTTAGTTGAGATTTTGATAAGATTGATT-CAGTTGATTGATTTAATGCAGGATGTGATTTTAAGAAAGTATA
TCCACTTGATTTAGATTATTCTAAGTTAATATATTTATGTTTGTTTTTATTTTGTGCGGTATTGGTTGGGGTTATAAAAA
GAACCTATCTGGGAAACAAAGGGGAAAGGGGAACGTGGGAGGAGAAAAACGGATAGGAGGTGGAGGCGACAAAATC----
------------------------------AACTCAGTAGAGATTACC--------------------------------
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-----------------------------------------------------------------------TCGATGATT
TCACAACTTGGGCATACATGCGGTTTAGTTACCCATGTATTTCCTTCCTCCGAAAAAGCTTGTCACAAGCTTATTCCTCA
AATGAATGTATCTATCACTAACTTGGTGCTAGATACATTTATTTGAGGGACAAGCTTTTCCGGACGGAAGGAGTAGTTCT
CTCAGAAGTCGTTGTACTGATTCTAAAAAAATGGTTG-------------------------------------------
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--------------TTGTACTGTGCGTTCCAGTGCAAAGATAGTCCACGTCGGATATGGTCTTGCTTAGTCTATAACTTT
GCAAAGGACACCTTGGACTATTGTGGTTTCACTAGATAGTCCTCGTGCTAGCCCGCATGATGATCGACCAAGGTACTTCC
ACCGCGGTCCGGCTTCGGAGAGGGAGGGAGGAAAGGAACCTAAACCGGATTCAAAGCGCCAGAATCGGATTCCAACCCTT
GGATAAATTGCCACCGATCGGGCCTTCCAAGTGCTTGTGCTCGGCGGCCGTGGAGCGAGGGAGTCCGAGGATAGGTTGAA
CTAGCTAGAACTCTAGAAGGCCCGTACCGCTGGTTCCTCCGTCTGGTCTGCAGGGTAGAAGACGAAGC----TCGGCCAA
CCAGATGGGGTCCATCCTGTGCTGCCTGTGCGGTCCCGACGACGATGACGAGGCGCCGGGTTGCTGCGCCTGCCTGCCAT
GGCCAGCCAGAGCGTACA---------------------------------------------CACGGGTTGCGCCGGTT
CCTCCCGAGGCCTCCACCGGCTCAGGGCAGGAGGATCCATTGAACACCTTCCGCCCCCCTCCTAGGGCTCTACCTTACGA
TGATCCTCGGTTCAGACATCACACGGAGAAATCTATTCTGCTCGGAGAGAGAAGCAATGCTGACACCGGATCGACTCGCG
ATGGTGATGAGAAGGCTGATGGACCGTCAA---TGGAAGCTCAGCCGGGAGGGGGGAAACCCAGGGGAACTCAAGTCTGT
GTTGATTGTGACGAGGATGACTGCCCGATATGCCTTGAGGAGTATGACTACGAGAATCCGAAGATACTGCTGCAATGCAA
CCATGATTTCCATCTTGGTTGCATCTACGCGTGGATGGAGAGAAGCCAGTCTTGCCCGGTCTGTGCCGTCGTAATGGTGT
TCAAAGAGGACCAA--------TGACCATGCTGGCTGCAAGCCTTTACACATGCT-AAGACCCACGATAATCGTTTAGTT
GTGTATATACACATGGCGTCGAT------GAAATCATGTCACTAGCCTTTGGCCAATTGCGGGGTAAAATTTGGTGGCAA
ATTATACCAGCAGAGTAATGACCTTGTTGTAGTCTCTTTTTTT--CCTTTTTTGAACTCTTGTTTCTATTTCTTAATTAA
TGAATG----AGACAAAGCTTTTGCATCTGTTGCCAAATAAAATGATGTCGCTAGATTGTTTGCTGAAACTTCGCTGCTA
AGATTCGAGAGCGGC--GTTACTGGTAGCGGTAGCATCTGGACATGTTATCCTAGTCCTAGGTCCATCTCTAGGGATCTG
GGCTAGAGGGTCAGTCTC-AGCATATACGGGTGTAAAAAAATGCAGTGATCTGACGCTATACTGTAAGGAACAGTGATGT
ACGGTAGCCCGCGGGCTCGTTTTTTGAAGCTCAGGTTAAGGTGACGAGCCGAGCCGTGGCTCGCCTCCGTAATGAAAAGT
TGTGCG-GAGGATCAGAAACGTATGCGCGCCGTCTGCTACGAAAACAT------CGCCGTCAAGGTA-CAGTGAATGCTG
ACC----GGCGGATGAAGTGTAGGGCAGCAGAAACATCTCGGTC---------------------------------CCC
ATCTACTCAATTGAGCCCTTCTCCTCCATCCCC-----TCCTAGCTCGATGGCGG--AAGGCGAATCAATGGCGGCGGCG
AGCAGTATGGCGGAGTTTCCAGACCTACGCCACAACGGGCTCGAATTTCTGCTGGATCCGGTTGACAGGTAATTTCTCCA
CTGTATTATTCTAAGTATTCAATTCGATCCGAAGACGCGCGAGCAAAAAAAGTCAATGGGTGGTCTTTGATTTGTTAAAC
ATGCCATAGGTTC-----CAGAGAGGTCATTGCGGATGTTGAGCAGCCAGATCCATTGGTGTTGACGTCTGTCGAG----
-----CCGTCGGCACCGGCACACGCCGACTCGTTGTGTGCGGGTGTGGTTGGGCAACTCAGCTGCGC
>chr2B_1
AGCGTAGAAAAACTA-ATAGTACTCCCTCTGTCCATGTCGGAGAAATGGATAAAAATGGACGTACTCTAGGCGTTCTACA
TCAATTTTGTTCGATATATACCTTACATCAATTTTGGTAATATTTAATTTGATGGGGTATGGGTAGAATAAGGCAAAAAA
AGTTTTGACTTAGTTCAAATTTTGATAAGATTGATTTCATTTGATTGATTTAATGCAAGACGTGGTTTTGAGAAAGTA--
TCCACTTGATTTAGATTATTCTAAGTTAATATATTTATGTTTGTTTTTATTTTGTGTGGCATTGGTTGGGGTTATCAAAA
AACCTATC--GGAAAACAAAGGGGGAAAGGGAACGTGGGAGGAAAAAACTGGATAGGAGGTGGAGGGGACGAAATC----
------------------------------AACTCAGTAGAGATTACACAGATGATTTCACAACTTTTTTAGAACGAAGG
CTCAAACAGAGGCCGACTTTGAATTAACAAAGCCACCAACCGGCCAAGATGACAACTCAAGGTTACAACCAGGCACCAAC
TAAAAAAGGAAAATAAACGGCAAAGATACAAAGGCGTCGGGGAGCAGCTCACAATGCACATACAACAAGCTAGATAAAAG
ATCGACAAAGAACATATAGCTTGGAGATGCCAGGGACCTCTTGCACGCCCAGAACCAAGGCAAAAGCCATAGCCTGCTCA
GGAGAGGGAACCGACAATGATGCAAGGAACGCTATTGCCAAAACACCCAGGCTTGAAGAAGACACATCCATCAAGATCCA
TCGTCAAAGAAGGCCCCTGCCTCCTCGCCTGGCTCGAAGGCATCGTACCATTTAACGATGAACATGCTCACCCTAGAACC
TGGATGGATGACATCGAAGAAAACCACAAGGGCGGAACCAGGTGTTCCCAACTTGCCGACAATACTCACCCAGAGCAGAG
CAGCGCCAAATACCAGAGTTCTGGCTTGAAAGAGGGTGAGCGGCCATAATGCACAAATGGGCAGTAGCAGTGCCAAGACC
CAATCGGGAGCTTCGGCTCGCTCGACGAGCTGAAGTGCAGCCACCAGAGGAGGGGAACCCTATCCCCTCCCATCCTGGAG
GATCCACGGGCACTGGAGGGATTCACTGCATCCCAACAAGGAGCACCAATACAACTTGACCCTGCGCAAGGGGAGACACT
GCCGCCGCTGGAGACATGATGCCGCCGCCGACACACTCCACTGACACCATAGCGAAGCCCACAACCCATCTTTGTTCCCA
ATACAGTGCCTTCAAGAAGGTTACGGCGCCATGGGGGTCGCCGCTGCCCAACAATGTTGAGGATTTCACCCGGGAGACAA
ACGAGAAGTGGATAGGGGGCAAGACCTGACCTGTGCCTCCAGGAAAGTGAGTGGCGCCCGCGGGCGTCGCCGTCGTTGAA
TCCGGCATGACGTGCTAGGGGTTTCCCCTGGTCCTGCAATCCCGTCACCCACTCCCTCGCGAAGAAAACCCAAGCCCCAT
GCCGAAGCAGGTCGGATCTGGGGGGAAGCTTGCTGGAGAAGTAGAGCGGGGGACGGCCACATCTGGTGCAGCCGGACCGA
AGCCGCCGTTGAGCATTGGCCCGCATCCTCCGGAGGTCATGTGGTCCACACTGCCGAGAAACGCCGGCCCGCGCCCGCGC
CGCCAAATGCCGAAGAGATGACGACGCCACACCTGCCGGGGCTGCCGCCCCGTATCGAGAGGCCTCCTGCGAGCGAGACA
AGGCGGCGAGAGCCCCCAGCTTGCCCGGCGGCAGCTGCCTCAGGCGACGGCGACGGGAGATCGAGGAAGGGAGGGAGGCG
ACGGGGCTAGGGTTTCGCCCCTTGGGTCGCCCAAGCGGGGCGACGCGACGCGAGAGAGGGGAGGGGAGTTTTCGATGATT
TCACAACTTGGACATGCATGTGGTTTAGTTATCCATATA-----------------------------------------
---------------------------------------------------------------------------GTCCT
CTCAGAA--------------------------GTTG-------------------------------------------
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--------------TTGTAGTGTGCGTTCCAGGTCAAAGATAGTCCACGTCGGATATGGTCTTGCTGAGTCTATATCTTT
CCAAAAGACACCTTGGACTATTGCGGTTTCACTAGATAGTCCTCGTGCTAGCCGGCATGATGATCGACCAAGGTACTTCC
ACCGGGGTCCGGCTTCGGAGAGGAAGGGAGGAAAGAAACC-AACCCGGATTCAGAGCGCCAGAGTCGGATTCCAACCCTT
GGATAAATTGCCACCGATCGGCCCTTTCAAGTGCTTGTGCTCGGCGGCCGTGGAGCGAGGGAGTCCGAGGATAGTAGGAA
CTAACTAGAACTCTAGAAGGCCGGTACTGCTGGTTCCTCCGTCTGGTGTGCAGGGTAGAAGACGAAGC----TCGGCCAG
CCAGATGGGGTCCATCCTGTGCTGCTTGCGCGGCCCCGAAGACGACGACGAGGCGCCGGGTTGCTGCGCCTGCCTGCCAT
GGCCGTTCTCGAACAACACTCAGAACCCGGCGGGCGCCGCCGCTCGTCATCCTAGAGCGTGCGCACGGGTTGCGCCGGTT
CCTCCCGAGTCCTCCACCGGCTCAGGGCAGGAGGATCCATTGAACACCTTCCGCCGCCCTCCTATGCCTTTGCCTTACGA
TGATCCTCGGTTCAGACATCCCGCGGAGAAATCTATTCTGCTCGGAGAGAGAAGCAATGTTGACACCGGATCGACTCGCG
ATGGTGATGAGAAGGCTGATGGACCGTCGTCCCTGGAAGCTCGGCCGGGAGGGGGGAAACCCGGGGGAACTCAAGTCTGT
GCTGATTGTGATGAGGATGAGTGTCCAATATGCCTCGAAGAGTATGATTATGAGAATCCGAAGGTGCTGCTGCAATGCAA
CCATGATTTCCATCTTGGCTGCATTTACGAGTGGATGGAAAGAAGCCAGTCGTGCCCGGTCTGTGCCATGGTGATGATGT
TCAAAGAGGACCAA--------TGACCATGCTGGCTGCAAGCCTTTACACATGCTCAAGACCCACGATAATCGTTTAGTT
GTGTATATATACATGGCGTCGAG------GAAATCATGTCACTAGCCTTTGGCCAGTTGCGGGGTAAAATTTGGTGGCAA
ATTATACCAGCAGAGTAATGACCTTGTTGTAA--TCTTTTTTTTCCCTTTTATGAACTCTTGTTTCTATTCCTTAATTAA
TTAATGGATGAGGCAAAGCTTTTGCATCTGTTGCCAAATAAAATGATGTCACTAGATTGTTTGCTGAAACTTCGGTGTTA
AGATTTGA------------------------------------------------------------------------
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>chr2A_169
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-------------TTGAGATTTTGATAAGATTGATTTCATTTGATTGATTTAATGCAAGAAGTGATTTTGAGAAAG--TA
TCCACTTGATTTAGATTATTCTAAGTTAATATATTTATATTTGTTTTTATT----------TTGGTTGGGGTTATCAGAA
AAACCTATTGAGGAAACAAAGGGGGAAAGGGAACGTGGGAGGAAAAATCAGGATAGGAGGTGGAGGCGACGAAATCAACT
CGGTAAAGAATTTAATTTTTTTGCGGGCAAAACTCAGTAGAGATTACACCGATGATTTCACAACTT--------------
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---------GGACATGCATGCGGTTTAGTTATCCATGTACTAGTTTTCTCGGGGCATGTACAATAATTTTATCTTAAGAG
TGCCACGTAGAATAAGTGATGAGGTGGAGAAAAGAGAAATCGTAAAAGAAGGCTTATCTTATCTTATTTAATAGAAAATA
AGAGATGATCTCTTAGCATAATTTGTCTCACCATATTTTTAGCAACAACTAATTATTGAAGATAAGACTAAGAGATGACC
CATTGTAGACATGTTTTTTTATCATCTCTAATTTAAATACAAAACTTAAAATAAAACTATCTTATCGACTATTGTACATG
TCCTCATAAGTTGTTTGTACTGTGCGTTGCAGGGCAAAGATAGTCCACGTCGGATATGGTCTTGCTCAGTCTATACCTTT
GCAAAAGACACCTTCGACTATTGCGGTCTCACTGGATAGTCCTCGTGCTAGCCGGCAGGATGATCGACCTAGGTACTTCC
ACCGCGGTCCGGCTTCGGAGAGAAAGGGAGGAAAGGAGCCTAAACCGGATTCAGAGCGCCAGAATCGGATTCCAACCCTT
GGATAAATTGCCACCGATCGGCCCTTCCAAGTGCTTGTGCTCGGCGGCCGGGGAGCAAGGGAGTCCGAGGATAGGTTG--
--AACTAGAACTCTAGAAGGCCCGTACTGCTGGTTCCTCCGTCTGGTCTGCAGGGTAGAAGACGAAGCTCGATCGGCCAG
CCAGATGGGGTCCATCCTGTGCTGCCTGCGCGGCCCCGACGACGACGACGAGGCGCCGGGTTGCTGCGCCTGCCTGCCAT
GGCCAGCCAGAGCGTACA---------------------------------------------CACGGGTTGCGCCGGTT
CCTCCCGAGGCCTCCACCGGCTCAGGCCAGGAGGATCCATTGAACACCTTCCGCCCCCCTCCTGGGCCTTTGCCTTACGA
TGATCCTCGGTTCAGGCATCCCACGGAGAAATCTATTCTGCTCGGAGAGAGAAGCAATGCTGACACCGGATCGACTGACG
ATGGTGATGAGAAGGCTGATGGACCGTCGTCCCTGGAAGCTCCGCCGGGAGGGGGGAAACCCGGGGGAACTCAAGTCTGT
GTTGATTGTGACGAGGATGACTGCCCGATATGCCTCGAAGAGTATGACTACGAGAATCCGAAGATCCTGCTGCAATGCAA
CCATGATTTCCATCTTGGTTGCATCTACGCGTGGATGGAGAGAAGCCAGTCTTGCCCGGTGTGTACCGTGGTAATGATGT
TCAAAGAGGACCAGTGACCAACTGACCATGCTGGCTGCAAGCCTAGACACATGCTCAAGACCCACGATAATCGTTTAGTT
GTGTATTTATACATGGCGTCGATGAAAATGAAATCATGTCACTGGCCTTTGGCCAACCGCGGGGTAAAATTTGGTGGCAA
ATTATACTAGCAGAGTAATGACGTTGTTGTAA--TCTTTTTTT--CCTTTTTTGAACTCTTGTTTCTATTCCTTCATTGA
T----GGATGAGGCAAAACTTTTGTATCTGTTGCCAAATAAAATGATGTCGCTCGATTGTTTGTTGAAACTTCGGTGCTA
AGATTCG-------------------------------------------------------------------------
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>chr1B_1810
ATTGA---------------------------------------------------------------------------
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--------GAGCGGCGTGTTACTGGTAGCGGTAGCATCTGGACATGTTATTCTGGTCCTAGGTCCATCTCTAGGGATCTG
GGCTAGAGGGTCAGTCTC-AGCATATACGGGTGTAA-AAAATGCAGTCGGCTGATGCTATACTGTAAGGAACAGTGATGT
AGGGTAGCCCGCGGGCTCGTTTTTTGAAGTTCAGGTTAAGGTGACGAGCCGAGCCGTGGCTCGCGTCCGTAATGAAAAGT
TGTGCG-GAGGATCAGAAACGTATGCGTGCCGTCTGCTA-AAAAACAT------CGCCGTCAAGGTA-CAGTAAATGCTG
ACC----GGCGGATGAAGTGTAGGGCAGCACAAACATCTCGGTC---------------------------------CCC
ATCTACTCAGTTGAGCCCTTCTCGTCCATCCCC-----TCCTAGCTCGATGGCGGGGAAGGTGAATCAATGGCGATGGCG
AGCAGTATGGCGGAGTTTCCAGACCTACGCCACAACGGACACGAATTTCTGCTGGGTCAGGTTCACAGGTAATTTCTCCA
CTGCATTATTCTACGTATTCGATTCGATCCGAAGACGCACGAGCAAAAAAAGTCAATGACTGGTCTTTGATTTGTTGAAC
ATGCCATAG---------------------TGCGGATGTTGAGCAGCCAGATCCATTGGTGTTGACGTCTGTCGAG----
-----CCGTCGGCACCGGCACACGCCGACTCGTTGTGTGCGAGTGTGGTTGGGCAACTCAGCTGCGC
>chr3A_1811
TTT-----------------------------------------------------------------------------
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------GAGCGTGGC--GTTACTGGTAGGGGTGGCATCTGAACATGTTATCCTGGCCAAAGGTCCATCTCTAGGGATTTG
GACTTGTGGGTCCATCTTTAGGATATACGGGTGTAAGAAAATGCAGTCATCTGACGCTATACTATGAGGAATAGTGATGT
ACGGTAGCCCGCGGGCTCGTTTATTGAAATCCAGGTTACCTTGACGAACCGAGCCGTGGCTCGCCTCCGTAACGAAAAGT
TGTGCG-G-GGATCAGAAACGTATGCGCGCCGTTTGCTGCAAAAACAT------CGCCGTCAAGGTT-CAGTAAATGCTG
AC-----GGCGGATGAAGCGTGGGGCAGCAAAAATATCTCGGACAGCTTTAAGAAAAAAAAAAGAGACACCTCGGTTCCC
ATCTACTCAGTTGAGCCCTTC-----------C-----CCCTAGCTCGACGGCGG--AGGGCAAATAAATGGCGGCGGCG
AGCAATATGGCGGAGTTTGCGGACCTACGCCACAATGGGCTCGGATATCTGCTGGATCTGATTGACAGGTAATTTTTCCA
CCGTATTATTCTG----TTCGATTCGATCCGAAGACGTGTGAGCAGAAATAGTCAATGACTGGTCTTCGGTTTGTTGAAC
ATGCCATAGGCTCCCGCTCAGAGAGGTCACTGCGGATGTTGAGCAGCCAGATCCATTGGTGTTGACGTTTGTTGAG----
-----CCGTCCGCACCGGCAAACGCTGACTCGTCGTGCGCGGGTGTGGTTGGACAACT---------
>chr3A_1811
TTT-----------------------------------------------------------------------------
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------GAGAGTGGC--GTTACTGGTAGGGGTGGCATCTGAACATGTTATCCTGGCCATAGGTCCATCTCTAGGGATTTG
GACTTGTGGGTCCATCTTTAGGATATACGGGTGTAAGAAAATGCAGTCATCTGACGCTATACTATGAGGAATGGTGATGT
ACGGTAGCCCGCGGGCTGGTTTATTGAAATCCAGGTTACCTTGACGAACCGAGCCGTGGCTCGCCTCCGTAACGAAAAGT
TGTGCG-G-GGATCAGAAACGTATGCGCGCCGTTTGCTGCAAAAACAT------CGCCGTCAAGGTT-CAGTAAATGCTG
AC-----GGCGGATGAAGCGTGGGGCAGCAAAAATATCTCGGACAGCTTTAAGAAG-AAAAAAGAGACACCTCGGTTCCC
ATCTACTCAGTTGAGCCCTTC-----------C-----CCCTAGCTCGACGGCGG--AGGGCAAATAAATGGCGGCAGCG
AGCAATATGGCGGAGTTTGCGGACCTACGCCACAATGGGCTCGGATATCTGCTGGATCTGATTGACAGGTAATTTTTCCA
CCGTATTATTCTG----TTCGATTCGATCCGAAGACGTGTGAGCAGAAATAGTCAATGACTGGTCTTCGGTTTGTTGAAC
ATGCCATAGGCTCCCGCTCAGAGAGGTCACTGCGGATGTTGAGCAGCCAGATCCATTGGTGTTGACGTTTGTTGAG----
-----CCATCCGCACCGGCAAACGCTGACTCGTCGTGCGCGGGTGTGGTTGGACAACT---------
>chr3A_1811
TTT-----------------------------------------------------------------------------
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------GAAAGTGGC--GTTACTGGTAGGGGTGGCATCTGAACATATTATCCTGGCCATAGGTCCATCTCTAGGGATTTG
GACTTGTGGGTCCATCTTTAGGATATACGGGTGTAAGAAAATGCAGTCATCTGACGCTATACTATGAGGAATAGTGATGT
ACGGTAGCCCGCGGGCTCGTTTATTGAAATCCAGGTTACCTTGACGAACCGAGCCGTGGCTCGCCTCCGTAACGAAAAGT
TGTGCG-G-GGATCAGAAACGTATGCGCGCCGTTTGCTGCAAAAACAT------CGCCGTCAAGGTT-CAGTAAATGCTG
AC-----GGCGGATGAAGCGTGGGGCAGCAAAAATATCTCGGACAGCTTTAAGAAAAAAAAAAGAGACACCTCGGTTCCC
ATCTACTCAGTTGAGCCCTTC-----------C-----CCCTAGCTCGACGGCGG--AGGGCAAATAAATGGCGGCGGCG
AGCAATATGGCGGAGTTTGCGGACCTACGCCACAATGGGCTCGGATATCTGCTGGATCTGATTGACAGGTA---------
CCGTATTATTCTG----TTTGATTCGATCCGAAGACGTGTGAGCATAAATAGTCAATGATTGGTCTTCGGTTTGTTGAAC
ATGCCATAGGCTCCCGCTCAGAGAGGTCACTGCGGATGTTGAGCAGCCAGATCCATTGGTGTTGACGTCTGTTGAG----
-----CCGTCCGCACCGGCAAACGCTGACTCGTCGTGCGCGGGTGTGGTTGGACAACT---------
>chr1A_1814
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------GAGAGTGGC--GTTACTGGTAGGGGTGGCATCTGAACATGTTATCCTGGCCATAGGTCCATCTCTAGGGATTTG
GACTTGTGGGTCCATCTTTAGGATATACGGGTGTAAGAAAATGCAGTCATCTGACGTTATACTATGAGGAACAGTGATGT
ACGATAGCCCGCGGGCTCGTTTATTGAAATCCAGGTTACCTTGACGAACTGAGCCGTGGCTCGCCTCCGTAACGAAAAGT
TGTGCG-G-GGATCAGAAACGTATGCGCGCCGTTTGCTACAAAAACAT------CGCCGTCAAGGTT-CAGTAAACGCTG
AC-----GGCGGATGAAGCGTGGGGCAGCAAAAATATCTCGGACAGCTTTAAGA-AAAAAAAAGAGACACCTCGGTTCCC
ATCTACTCAGTTGAGTCCTTC-----------C-----CCCTAGCTCGACGGCGG--AGGGCAAATAAATGGCGGCGGCG
AGCAATATGGCGGAGTTTGCGGACCTACGCCACAATGGGCTCGGATATCTGCTGGATCTGATTGACAGGTAATTTCTTCA
CCGTATTATTCTT----TTCGATTCGATCTGAAGATGCGTGAGCAGAAATAGTCAATGACTGGTCTTCGGTTTGTTGAAC
ATGCCATAGGCTCCCGCTCAGAGAGGTCACTGCGGATGTTGAGCAGCCAGATCCATTGGTGTTGACGTCTGTTGAG----
-----CCGTCCGCACCGGCAAACGCTGACTCGTCGTGCGCGGGTGTGGTTGG---------------
>chr1A_1814
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------GAGAGTGGC--GTTACTGGTAGGGGTGGCATCTGGACATGTTATCCTGGCCCTAGGTCCATCTCTAGAGATCTA
GACTAATGGGTCCATCTTTAGGATATACGGGTGTAAGAAAATGCAGCCATCTGACGCTATACTATGAGGAACAGTGATGT
ACGGTAGCCTGCGGGCTCGTTTATTGAAATTCAGGTTACCTTGAC-------GCCGTGGCTCGCCTCCGTAACGAAAAGA
TGTGCG-G-GGATCAGAAACGTATGCGCGCCGTTTGCTGCAAAAACAT------CACCGTCAAGGTT-CAGTAAACGCTG
AC-----GGCAGATGAAGCGTGGGGCAGCAAAAATATCTCGGTCAGCTTTAAGA-AAAAAAAC---ACACCTCGGTTCCC
ATCTACTCAGTTGAGCCCTTC-----------C-----CCCTAGCTCGACGGCGG--AGGGCAAATCAATGGTGGCGGCG
AGCAATATGGCGGAGTTTGCGGACCTACGCCACAATGGGCTCGGATATCTGCTGGATCTGATTGACAGGTAATTTCTCCA
CCGTATTATTCTG----TTCGATTCGATCCGAAGACGCGTGAGCGGAAATAGTCAATGACTGGTCTTCGGTTTGTTGAAC
ATGCCATAGGCTCCCGCTCAGAGAGGTCACTGCGGATGTTGAGCAGCCAGATCCATTGGTGTTGACGTCCGTTGAG----
-----CCACCCGCACCGGCAAACGCTGACTCGTCGTGTGCGGGTGTGGTTGGACAACT---------
>chr7D_1814
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------GAGAGTGGC--GTTACTGAAAGCGGTGGCATCTGAACATGTTATCCTGGCCGTAGGTACATGTATAGGGATCTG
GTCCAGTGGAACCATTCGACATA-ATACGGGAGTAAGAATTTCGATTCGTCTGACGCTATACACAGGTGAACAGTGATGT
ACGGCAGCCCACGGGCTAC--------------------GGTGACGAGCCGAGCCGTGGCTCGCCTCCGCCACCAAAAGC
CGGGCGTG-GGATCAGAATCGTATGTTCGCCGTCACGTGCAAACACAT------CGCCGTCAAGGAT-CAGTGAATGTTG
ACCGACCGGTGGATGAAGTGTGGGGCACCCAAACTATCTTGGCC---------------------------------CCG
CACTAGTAAGTTAAGCCTTTCTCCCCTCCCCCCAACCTCCCTACCTCGACGGCGG--AAGGTGAAACCATGGCGGCGGCG
AATGGTACGGCGGAATTTGCAGGCCTACGCCACAACGGGATCAAATTTCTGCTAGATCCAGTAGACAGGTAATGTCTGAA
CTGTATAAATCTG-----TTGATTCAATCCAGACACGCCCAAGCACAAATACATTTTGCCTAGTATTCGATTTCT-----
------TAGATTGCCGCTGAGAGAGGTCACAGCCGGCGATGGGCACCCAGATCCATTAGTTTTGATGGCTGTTGGGCCGA
CGGCACC---------GGCAAGAGCCGACTCGTCGTGCGCGG-------------------------
>chr3B_1815
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-------AGAGCGGC--GTTACTGGTAGCGGTACCATCTGGACATGTTATCCCGGTCGTACGCCCATCTCTAGGGATCTG
GGCTAGAGGGTCTGTCTC-AGCATATACAGGTATAAGAAAATCCAGTCGTCTGACACTATACTGTGAGGAACAGTGATGT
ACGGTAGCTCGCGAGCTCGTTTTTTGTG----------AGGTGACGGGACGAGCCGTGGCTCCCCTCCGTAACGAAAAGT
TGTGGG-G-GCATCAGAAACGTATGTGCGCGGTCTGCTACAAAAACATGGAAATCGGTGTCAAGATTCCAGTAAACGCTG
ACC----GGCGGATGAAGTGTA----------------------------------------------------------
-TCTACTCAGT----------------------------------TCGATGGCAG--AAGGCGAATCAATGGCGGCGGCA
AGCAGTATGGCGGAGTTTCCAGACCTACGCCAGAACGGCCTCGAATTTTTGCTGGATCCGGTTTACAGGTAATTTCTCCA
CTGTATTATTCTA----TTCGATTCGATCCTAAGACGTGCGAGCAAAAAAAGTCAATGACTGGTCTTCGATTTGTTGAAC
ATGCCATAGGTTGCCGCACAGAGAGGTCACTACGGATGTTGAGCAGGCGTATCCATTGGTGTTGACGTCTGTCGAG----
-----CC---------GGCACACGCCGACTCGTTGTGTGCGGGTGTGGTTGGGCAACTCGGC-----
>SNPs
----------S----S----------S--S-----------------------------S------S----S--------
----------SS----------S--------S---S----------------------------------------SS--
-------S-------------------------------S-----------------S--S--------S----------
--------------------------------------------------------S--S---------------S----
S-------SS--------------S--S---------------S----SS--------------------S---------
-----------------------------------------------S--------------------------------
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-----------S---S---------------S-------S-SSS--S---S-SSS-S-SSSSSS-SSSSSS-S--SSSSS
SSSS-SSSSSSS--SSSSSSSSSSS-SSSS-S-S-S-SS-SS-SS-S-S-SSSSSS-S-SSSSSSSSSSSSSSS---S--
-------S--SS-SSS-SS-S-S-SSSSS-SSS-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S---------------------------------S--------S----
-----S-----------------S-----------------------------S--------------------------
-----------------------S-----------------------------S--------------------------
---------------------S----------------------------------------------------------
---S-----------------------S---------------------------------------------------S
----------------------------S----S-----------S----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S--S-S--------
--------------------S-----------------------------------------------------------
----------------------------SS------------S-------------------S-----------------
-----------------------------------S--S--------------------------S--------------
---------------------------------------------------------------------S------S---
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------------------------SSS------------------------------------S---------
-S----------S-------------------------------------------------------------S-----
-----------------------------------------------------S--------------------------
------------------------------------S----------S--------------------------------
-----------------------------S--------------------------------------------------
----------------------------------------S---------------------------------------
------------------------------S-------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------S-------------------------------------SS----------------S---
-----------------------------S--------------------------------------------------
-------------------------------------------------------------------
>forward_2064
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--------------------------------------------GAGGGACAAGCTTTTCCGGA----------------
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>reverse_3106
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-----------------------------------------------------------------ACTGCTGCAATGCAA
CCATG---------------------------------------------------------------------------
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-------------------------------------------------------------------
>forward_2990
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----------GAAGGCTGATGGACCGTCAA--------------------------------------------------
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>reverse_4101
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--------------------AATTCGATCCGAAGACGCGC----------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
