>input_sequence_77360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATGGCGAGG
CATATCCAAGCCGATCACGAGTCCGCAGATGACAGTGGTGGTGCTGCTGGTGCCGCGCTCGTGCTGTGGGACTGCGGCAG
CGCGCTCTACGACTCGTACGAGCTCACCGCCTTCAAGCGCCAGCTCGACGCCGCCGTGCTCGCCGGCCGCTCGCTCTCAA
TGCCGCACCTCCCCGCCGCCAGCCCGGCCGTTCAGCCAGCCGGCCGCAGGAAGCGCGCGAGGCGGCTCCCCGCCCTGCTC
CGGAGGCTCTTCTCCAAGGTGCTGCGGCTGGCGTCGGCGCGCGGGGCGAGACACGACCGCTACCGGGCGTACGAGGGGTA
CGGCCACGGCGGCTACAGCGGCACGGGGTCGCCGTGGTCCGGGGCGCTGACGTCCATCCCGGAGGAGAGCGGCGGCAGCC
CGGAGGCGGGGTCGTCCCCGGTCGTCCCCGGCCCGAGCGCGCTGCGCAGGGCGCAGTCGGAGCGGTTCATCGGCAGCAAG
ACGGCGACCCCGATGGTGCAATTCGATGTCGTCTTGTAG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>chr7B_1_TraesCS7B01G231900
ATAACGGTGAAAACCCCTTAATCCTACTCTCCAAGCATTGATCAGGCCTTCCCCTGCCTCCTCGCACTGGAGAGGTCTTT
TTTTTTTCCTTTTTTTGAACCGGGCTATCCCATTTCCATTATTGAGAACGGAAATACATCGGTCTTACAAGACGGAATTC
GAGAGGTCACCTGAGGTGAGGACCGGCGGAAAAATAGAAATAAGGATGTGTCTTCCTTTTCTTGGTGGGTGT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TTTTGTTTATGCAGGTTTGGTCCGTTAC
CAAGCAAGCTATTCGATCTATCCAGGACAAGCGCCGGAATCGCTCTTGTGACTT-GGGGGTTCGTCGACATCGTTTCCCT
GACTCCCTAGAGTGGAATAATTCATCCGTTACATGGATGATAAGATCTCTGATCCATCTTTGTCTGATTCCGCTTGCGCT
CCTCCAATAATGTTTAAATGCGTCGAGAAAAAATACATTTGTATGGAATATTTTTATCCGCTGTTGCTCTCTGAAAGACA
TGCAAGTTTGAAGTTC-AAAATGTTCTGTAGGCAGTTGTTGGGCTCTGATC--TACAGACGTGGACATGATCTCCTTCTA
ACAATAAACAAAACAAGCGTCCATATATGATATATCCACGTACGCCTCGATCGTCAGGTCTTCCATGGAAATTATGATCC
AAAGTTTAATGGTCGAGCCTCTCAAGTAAATTAAC---------------------------TGCTTACTGTGCGACAGA
TAAGCGTATGCGTTTACACCTA---ATCAATCCCCCACAAAGAGCGCGTCCCACTCCCACATCCACCTTTGGATCACCAT
CTC-----CTTTTTCACTCACGTCGATCGGCCGCAAGTGGAGACGGAGGTCGATCGTGTCGTGTGAGCCGTGAGC----T
CGTCCGCCCCCTTTATCACACGCTGCACACCGCGCGTTCATGCCGCCTCCACCCACTTGTAAAGCGAGCCAGCC------
--CCTCTCTCCTTCCCTCTCTCATCCATTTCTTGCTGCTTTGATCGAAGCAAAAAAGGGAAAGCTATAAAGATGGCGAGG
CATATCCAAGCCGATCACGAGTCCGCAGATGACAGTGGTGGTGCTGCTGGTGCCGCGCTCGTGCTGTGGGACTGCGGCAG
CGCGCTCTACGACTCGTACGAGCTCACCGCCTTCAAGCGCCAGCTCGACGCCGCCGTGCTCGCCGGCCGCTCGCTCTCAA
TGCCGCACCTCCCCGCCGCCAGCCCGGCCGTTCAGCCAGCCGGCCGCAGGAAGCGCGCGAGGCGGCTCCCCGCCCTGCTC
CGGAGGCTCTTCTCCAAGGTGCTGCGGCTGGCGTCGGCGCGCGGGGCGAGACACGACCGCTACCGGGCGTACGAGGGGTA
CGGCCACGGCGGCTACAGCGGCACGGGGTCGCCGTGGTCCGGGGCGCTGACGTCCATCCCGGAGGAGAGCGGCGGCAGCC
CGGAGGCGGGGTCGTCCCCGGTCGTCCCCGGCCCGAGCGCGCTGCGCAGGGCGCAGTCGGAGCGGTTCATCGGCAGCAAG
ACGGCGACCCCGATGGTGCAATTCGATGTCGTCTTGTAGTTGTAGCTCGTATGTGCATGGAGTAGTAGT---TACTTAGG
TACCAGACCATCACAAGCCTGTAAGATA-CCTGTATACTGCAGAATATGCACCCTGCAGTGAGTTCTTCTGTGCTGCTGT
ACATACAGTGTTCGTGTAAGAATTTACAGGTGAC-AACTAATGAAGT-GCGGCCATGGTAAAATAGATTGTGGCCGTTTT
TTTTTTTAAACGGCAAAGT--AGC--TCTTGCGACAAATTGGAACTTGGAAGCAGGGTGGTTGAGGAGGATGCTTTCTC-
GTTGACATCACTAGTGAGGTCAGGTGGGCATCTGTTTTTGTCACTCCCATGTGGTAATC------CGTTACGCGCATCCT
CACGGGGTCACCGTGTTCAATTTTCTTCTCCATCCACTCCAAGATACGTAAGCAAATCAGATAAGCCAACAGCGAGCACA
GCTCTCCTCGCATCCTGGCCTGAA----------------ATGGATGCGAGGATGGAAAGGATCGCCAGAAAGACTGCCT
TGGAGCCTGTCAGCGCGAAAGGTGACGGCCGTGTGCAGAGTAATTTGCCAGATTTATGTCATAACTTCTGGGCCCTATTT
GATTCCCAAAATGTTAAGTTGGTATTCAGATGGAATCAGGTAGAGCACCAGCAATTCGTGCATCACACGTGCAACGCGAA
AAACAAGCTCAAATTTATTGACATGGTTTTAATCCATATATATTCGTGAACTACACGAGTTAAAATGTACTCCCTATGTC
TAGATACATCCGTTTGAGCGTCAACTAATTCCGGACGGAGGAAGTAGCGTAGTTTACAGATTGTTCAAGGTGCATCCGAC
AGCAGGAATGTAGGATGCTGTACATGCCACCTTGTGCAGTCCAGGAAAGAAGATTCAGATCATTCACTCTTATTTTCTCT
TCAACCTATTGTTTTGTGATCGATAAAAGACCATGCTGCCAAAAAAACAGAGGTGAAGAACTTTGATCTTGATTCCAGAG
CTACACGCTCTTGTTTTGAACGATTTTGGGGG
>chr7D_1
ATAACGGTGAAAACCCCTTAATCCTACTCTCCAAGCATTGATCAGGCTTTCCCCTGCCTCCTGGCACTAGAGAGGTCTT-
---------TTTTTTTGAACCGGGTTATCCCATTTCCATTACTGAGAACGGAAATACATCGGTCTTACAAGACCGAATTG
GAGAGGTCACCTGAGGTGAGGACCGGCGGAAAAACATAAACAACGA--TGTCTTCCTCATCTTGGTGGGTGT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TTTTGTTTATGCAGGTTTGGTCCGTTAC
CAAGCAAGCTATTCGATCTATCCAGGACAAGCGCCGGAATCGCTCTTATGACTTGGGGGGTTCGTCGACATCGTTACCCT
GACTCCCTAGAGTGGAATAATTCATCCGTTACATGGATGATAAGATCTCTGATCCATCTTTGTCTGATTCCGCTTGCGCT
CCTCCAATAATGTTTGAATGCGTTGAGAAAAAATACATTTGTATGGAATATTTTTATCCGCTGTTGCTCTCTGAAAGACA
TGCAAGTTTGAAGTTC-AAAATGGTCTTGAGGCAGTAGTTGGGCTCTGATCAATACAGACGTGGACATGATCTCCTTCTA
ACAATAAACAAAACAAGCGTCCATATATGATATATCCACGTACGCCTCGATCGTCAGGTCTTCCATGGAAATTATGATCC
AAAGTTTAATGGTCAAGCCACTCAAGTAAATTAAGTGCTTCATTCGCAAAAAAAATAAAAATTGCTTACTGTGCGACAGA
TAAGCGTATGCGTTTACACCTAATCATCAATCCCCCACAAAGAGTGCGTCCCACTCCCAAATCCACCTTTGGATCACCAT
CTC-----CTTTTTCACTCACGTCGATCGGCCGCAAGTGGAGACGGAGGTCGATCGTGTCGTGTGAGCCGTGAGCGAGCT
CGTCCGCCCCCTTTATCACACGCTGCGCGCCGCGCGTTCATGCCACCTCCACCCACTTGTAAAGCGAGCCAGCC------
--CCTCTCTCCTTCCCTCTCTCATCCATTTCTTGCTGCTCTGATCGAAGCAAAAAAGGGAAAGCTATAAAGATGGCGAGG
CACATCCAAGCCGATCACGAGCCTGCAGATGACAGTGGTGGTGCTGCTGGTGCCGCGCTCGTGCTGTGGGACTGCGGCAG
CGCGCTCTACGACTCGTACGAGCTCACCGCCTTCAAGCGCCAGCTCGACGCCGCCGTGCTCGCCGGCCGCTCGCTCTCCA
TGCCGCACCTCCCCGCCGCCAGCCCGGCCGTTCAGCCAGCCGGCCGCAGGAAGCGCGCGAGGCGGCTCCCCGCCCTGCTC
CGGAGGCTCTTCTCCAAGGTGCTGCGGCTGGCGTCGGCGCGCGGGGCGAGACACGACCGCTACCGGGCGTACGAGGGGTA
CGGCCACGGCGGCTACAGCGGCACGGGGTCGCCGTGGTCCGGGGCGCTGACGTCCATCCCGGAGGAGAGCGGCGGCAGCC
CGGAGGCGGGATCGTCCCCGGTCGTCCCCGGCCCGAGCGCGCTGCGCAGGGCACAGTCGGAGCGGTTCATCGGCAGCAAG
ACGGCGACCCCCATGGTGCAATTCGATGTCGTCTTGTAGTTGTAGCTCGTATGTGCATGGGGTAGTAGTAGTTACTTAGG
TATCAGACCATCACAAGCCTGTAAGATA-CCTGTATACTGCAGAATATGCACTCTGCAGTGAGTTCTTCTGTGCTGCTGT
ACATACAGTGTTCGTGTAAGAATTTACAGGTGAC-AACTAATGAAGT-GCGGCCATGGCAAAATAGCTTGTGGCCGTTTT
TTTTTTAC-ACGGCAAAGTATAGC--TCTTGCGACAAATTGGAACTTGGAAGCACGGTGGTTGAGGAGGATGCTTTCTC-
GTTGACATCACTAGTGAGGTCAGGTGGGCATCTGTTTTTGTCACTCCCATGTGGTAATC------CGTTACGCGCATACT
CACGGGGTCACCGTGTTCAATTTTCTTCTCTGTCAGTTCCAAGATACGTAAGCAAATCAGATGAGCCATCGGCAAGCGCA
GCTCTCCTCCCATCCATGGCCTGAATCTTGTCTTCAGGCCATGGATGCGAGGAGGGAAAGGATCGCGAGAAAGACTGCCT
TGGAGCCTGTCAGCGCCAAAGGTGACGGCCGTGTGCAAAGTAATTTGCCAGATTTATGTCATAACTTCTGGGTCCTATTT
GATTCCCAAAATGTTAACTTGGTATTGAGATGGAATTAGGTAGAGCACCAGCAATTCGTGCATCACAGGTGCAATGGAGA
AAACAAGCTCAAATTTATCGACATGGTTTT---CCATATATATTCGTGAACTACAAGAGTTACGATGTACTTCCTATGTC
TAGATACATTCGTTTGAACGTCAACTAATTCCGGACGGAGGAAGT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>chr7A_1
ATAACAGCGAAAAACCCTTAATCCTAGTCTCCAAGCATTGATCAGGCCTTCCCCTGCCTCTTGGCACTGGAGAGGTCACG
TGAGGTGAG-----------------------------------------------------------------------
-----------------GAGGACTGGCGGAAAAACAGAAACGACGA--TGTGTTCCTTTTCTTGGTGTGTATTTTTGTTT
ATGGTTGACATTTGAGAAAGCATAGGCTTTGAAACACCCCCTTATCTAGCCATCCATTTCTTCATCAAGATTCGTGCAAG
AACTTTTGTCTTTTTTGTTTCTTTCAAATAAAACAACATATAAACTTGAAACTTTGCAGTACAGCAAAACATTCTAACTA
GAATGTGGGAAAAATCTTTCAGATTTTTTTAGTGAATCATATATAGTAAAAGTAATATTTTTTACTAAAAAAATCTCATT
TTGTATATTTATGTCAAACGAAAAAATCTGAAAGTTTTTACCCACATTGTAGTAAGAATGTTTTATTGTCCTGCAAAGTT
CGAAGTTTGTATGTTTTTTTTTTGAAGAAATAAAAAAGAGAAAATTTCATGTAGTGAGTTAGTTGTGTACCACGGATCTC
AAAACAACATTGGGGGGCACGTCCGAAAGCCTGAGTTTCAAAATCCACGTTCTTTTGTTTATGCAGGTTTCGTCCATTAC
CAAGCAAGCTATTCGATTTATCCAGGACTAGCGCCGGAATCGCTCTTGTGACCT-GGGGGCACGTCGACATCGTTACCCT
GACTCCCTAGAGTGGAATAATTCATCCGTTGAATGGATGATAAGTTCGCCGATCCAACTTTGTCTGATTCCGCTTGCCCT
CCTGCAATGATCTTTGAATGCGTCGATAAAAGTTT-ATTTGTATTGAATATGTTTATCCGCTGTTGCTCTCTGAAAGACA
TGCAAGTTTGAAGGAAAAAAATGTTCTGAAGGCAGTAGTTGGGCTTCGCTCAGTACAGACGTGGACATGATTTCCTTCTG
ACAATAAACAAAACAAGCGTCCATATATGATATATCCACGTACGCCTCGATGTCAGGAAGA-CCATGGAAATTATGATGC
AAAGTTAAATGGTCAGGCCACTCAAGTAAATTAAGTGCTTAC-----------------------------TGCGACAGA
TAAGCGTATGCGTTTACACCTAATCT---ATCCCCCCCAAAGAGTGCGTCCCACTCCCACATCCACCTTTGGATCACCAT
CTCTGCACCTTTTTCTCTCACGTCGATCGGCCGCAAGTGGAGACGGAGGTCGATCGTGTCGTGTGAGCCGTGAGC----T
CCCTCGTCGCCTTTATCACACGCTGCACACCGCGCGTTCATGCCACCTCCACCCACTTGTAAAGCGAGCCAGCAGCCCCT
CTCCCCTCTCCCCCTCCCTCTCATCCATTTCTTGCTGCTTTGATCCAAGCAAAAAAGGGAAAGCTATAAAGATGGCGAGG
CACGTCCAAGCCGATCACGAGCCCGCAGATGACAGTGGTGGTGGTGCTGGTGCCGCGCTCGTGCTCTGGGACTGCGGCAG
CACGCTCTACGACTCCTACGAGCTCACCGCCTTCAAGCGCCAGCTCGACGCCGCCGTGCTCGCCTGCCGCTCGCTCTCCA
TGCCGCACCTCCCCGCCGCCGACCCGGCCGTCCAGCCAGCCGGCCGCAGGAAGCGCGCGAGGCGGCTTCCCGCCCTGCTC
CGGAGGCTGTTCTCCAAGGTGCTACGGCTGGCGTCGGCGCGCGGGGCGAGACACGACCGCTACCGGGCGTACGAGGGGTA
CGGCCACGGCGGCTACAGCGGCACGGGGTCGCCGTGGTCCGGGGCGCTGACGTCCATCCCGGAGGAGAGCGGCGGCAGCC
CGGAGGCGGGGTCGTCCCCGGTCGTCCCCGGCCCGAGCGCGCTGCGCAGGGCGCAGTCGGAGCGGTTCATCGGCAGCAAG
ACGGCGACCCCCATGGTGCAATTCGACGTCGTCTTGTAGTTGTAGCTCGGATGTGCATGC--------TAGTTACTTAGG
TATCAGACCATCACAGGCCAGTAAGATAACCTGTATACTGCAGAATATGCACTCTGCGGTGAGTTCTTCCGTGGTGCTGT
ACATACAGTGTTGGTGTAAGAATTTACAGGTGACAAACTAATGAAGTGGCGGCCATGGCAAAATAGCTTGTGGTCGTTTT
TTTTTAAC-ACGGCAAAGTAGCTCGATCTTGCGACAAATTGGAACTTGGAGGCACGGTGGTTGGGGAGGGTGCTTTCTTA
GTTGACATCAGTAGTGAGGTCAGGTGGGCATCTGTTTTTGTCACTCCCATGTCCATGTGGTAATGCGTTACGCGCACCCT
CACGGGGCAACCGTGTTCAATTT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>SNPs
--------------------------------------------------------------S----------------S
-SSSS-SSS---------------S----------------S-------------------------------S-----S
----------------------------------S-----S--S--SS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
----------------------------S-------S-------------------------------------------
--------------------------------------------------------------------------------
--------------S----S--------------S---------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--S------------------S----------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S------------------------------------------------S-------------------
--S-------------------------------------------------S---------------------------
----------------------------------------------------------S-------S-------------
------SSS---------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------------------------------SS--SSS-------------------------S-----S-S--S---S--
---------S-----SS-S-SSS------------------------------S------------S-------------
----------------S--------------------S----------------------------------S-------
-----------------S--------S---------S------------------------------S------S-SSS-
------------------S-----------SSS----------------------S------SS-------S--------
---------S-------S---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_80
------------------------------------------------------------CTCGCACTGGAGAGGTCTTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>reverse_2083
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CCAGACCATCACAAGCCTGT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
