>input_sequence_77316
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-----------ATGGCGGCGGCGATCCCCATTCTTCTCCTCACCTTCCTCCTCGCGGCGGCAACGCCATCGGCCGGGCCT
TCATACGTCATCAAGACGACGTGCGCAGCGGTGACCAATGCCACCGTGGGTACGCCCTACAGATACTGCCTCCGCACGCT
CTCGGCCAACCCCGCGGCCGCCGCCGCCAAGGACGCCCGCGGGCTTGCCATCGCGGCGACCAACCTCACCGCCACCAACG
TCACGTCGACGGAGCTAACCATCACCAGGCTAATCGACGCCCTCTACAACTGCCTCGTCACCTACCAAAGCATGCAAGAA
TCAATCGCCGGGGCGCTCCAAGACTTGAACGCCGGCCGCTTTGACGTGGCGTCGCCCAAGCTCAGGGACGCTTCGTTTCA
GCCGGACTTCTGTGAACTGGCGATGATGGAAAGCGACACCGACAAGGACCCCATGTCGGACGAGAATAGTGCAAACTATT
TGGTGTCCGGCATGGCGTATAACATCGCTGAACTCATCGCCCGCCATGCCGCCAAATGA---------------------
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>chr4B_1_TraesCS4B01G003800
CCGGTTCGTGGCACGAACCGGTACTATAGGTTCGCCACGAACCGGTACTAATGAGAACGGCAGGCTAGCCATTGGAACCG
GCACTAATGGACACATTAGTGCCGGCTCAAAACCAAACCGGCCCTAATATGTCTCATATTAGGTCATTTTTCTACTAGTG
TTCCATGACTTTGACAAATGATCCTATACCAAGTAGTTGCAATAATATTGCGGTTTGTTTGAAAGCTGGGACAAAATGTT
CAGCCAGGCACCACTGGCCGATCTAGTAAATATTGCGTTCGGGTTCCAAGCATGCTTTGGGTGAATCACCAAAATATCCG
TTTATCATATATATATGGACAAAGTAGGGAGTACAAGGTATATATGGACAAAG---------------------------
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-------------------TGCACGAAGTGTTTGGCAATGGGCACCATCTTCCCGTGCTTGGTTGGTTCCACACCTACTC
AAGAAAAGAAAATCTTTCTTCAAGAAAAAAAAGAAAAA-AAAAGAAAAGAAAATTGAATTACTCGTATATGCATGACACA
CACGGCCGGTAATTGTTTTAATTTAATTTAGGATTCAGGAGACATGTCCCAATGCAAAAAGGGAAAAAAAA----GGACA
TGCATCATACTCCCTCCGTTCCTAAATGTAAGTCTTTGTAGAGATTCCATTATAAACCGCATACGGATGTATATAGATGC
ATTTTAAGTTTAGATTCATTCATTTTACTCTGTATATAGTTCACATAGTAAAATCTCTACAAAGACTTATATTTAGAAAC
GGAGGGGGTAGGTTGTGGTCGCCGGCCCTTGCGGCACTAGCCAGCAGTACAGTAGTATAACAAACTAATGCTCTGATCCG
TTCATCACTTGACTTTTTCGCCAACAAAATATAAATGGCTCCCAACCAACTAACCAACAACTCCCTCACCCACATCTGAC
TTGTTCGCGGATGCATGTACAGTAGTATATTGTAGTATATATAAAGAAACTGGGGCGCTGCAGGCTGCATCTGCCCGCAC
AAGTAGAATCCATGGCGGCGGCGATCCCCATTCTTCTCCTCACCTTCCTCCTCGCGGCGGCAACGCCATCGGCCGGGCCT
TCATACGTCATCAAGACGACGTGCGCAGCGGTGACCAATGCCACCGTGGGTACGCCCTACAGATACTGCCTCCGCACGCT
CTCGGCCAACCCCGCGGCCGCCGCCGCCAAGGACGCCCGCGGGCTTGCCATCGCGGCGACCAACCTCACCGCCACCAACG
TCACGTCGACGGAGCTAACCATCACCAGGCTAATCGACGCCCTCTACAACTGCCTCGTCACCTACCAAAGCATGCAAGAA
TCAATCGCCGGGGCGCTCCAAGACTTGAACGCCGGCCGCTTTGACGTGGCGTCGCCCAAGCTCAGGGACGCTTCGTTTCA
GCCGGACTTCTGTGAACTGGCGATGATGGAAAGCGACACCGACAAGGACCCCATGTCGGACGAGAATAGTGCAAACTATT
TGGTGTCCGGCATGGCGTATAACATCGCTGAACTCATCGCCCGCCATGCCGCCAAATGAAGAATTAATGCCGCACGCTGG
CAGTAGTTGATTCTTGTCTTCCTTAATAATCCTTATTATTAGGTAGTACTACTCACGTTAATCATGTCTTGCGTTAACCA
AGTTAATATTTCACCATTTTACTTTGTCAGTTTTTCTCATTACTTAATTATGCATCAGTCATGTTGATCGAGTGCTGTAA
ACGGACCATATGATCAATCGAATTGTGTTGCGATTCTTGATGTATCACCTTCATTTCTGTGGATTAAGATTTATCCAAGG
AAGAGACCTTTTTTGTGTTCACAAAAGCTTAATGGCTTCAGCAGCCTCTCAATTCTTCTAAATAGGCATCAACCCGTCCC
ACTTTGCTTCAAGATGATTCTGATATTGCTCACAATCTTAAGCTTATCCTATGTTCGTCTGAACGAAAAAGCTAAAATCC
TGATGGCAGGATTTCTGCAACAGATCCAAAAGCATTGGATCTCATTCGTTCTAGATCGTTCGGTCGTGCGCGACCCCGTG
TTTCCTTTTTTCTCCCGCAGTTTTTGCTCTCACTCCCGATGATTTTCTTCACCGCGGTCGCTCAGAATGAGCAGAAAGTT
GTTTTCTAATGCAAAAATAAGATCTACGTGGGAATCGATAACCCATTCCCATGGTAGAGAAATTTGGCAAAACTACCCAA
CTCACCTACCGCTTGTTTTGTGGTGACTATAGGATAATCGTACTATTTTCACTTGGTTCATCTATGCTATAATAGCCAAC
CTTCGTTCAACGAAAATTTTATCACGTGGTTTCTCTGACTTGTTCGATGCTGATAATTTTGTAGTTAAGTTGTAGCCCGC
GGAATAGTTATCAACTTCCTAAAGCTACAGTTATCATCATTGTTTTATATAGTTATTAGCACGCTCATGTCATAGTTACC
AAACTGTTTATGTTCAAGCTATCTAGCTGCTCATCTTGTGGTTACCAGAGGTTGATCCCGATATTTTCTCGTGAGCAGCA
GCGATTTTCTTTTTTTGGC
>chr4D_161
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TTCCATGACTTTGACAAATGATCCTATACCAAGTAGTTGCAACAATATTGCAGTTTGTTTAAAAGCTGGGACAAAATGTT
CAGCCAGGCACCACTGGCCGATCTAGTAAATATTGCGTTCGGGTTCCAAGCATGCTTTGGGTGAATCACCAAAATATCCG
TTCATCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTGCACGAAGTGTTTGGCAATGGGCACCATCTTCCCGTGCTTGGTTGGTTCCACACCTACTC
AAGAAAAGAAAATCTTTCCTCAAGAAAAAAAAGAAAAAAAAAAGAAAAGAAAATTGAATTACTCGTATATGCATGACACG
CACGGCCGGTAATTGTTTTAATTTAATTTAGGATTCAGGAGACATGTCCCAATGCAAAAAAGGAAAAAAAAAAAAGGACA
TGCATCA-------------------------------------------------------------------------
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--------TAGGTTGTGGTCGCCGGCCCTTGCGGCACTAGCCAG--------TAGTATAAAAAACTAATGCTCTGATCCG
TTCATCACTTGACTTTTTCGCCAACAAAATATAAATGGCTCCCAACCAACTAACCAACAACTCCCTCACCCACATCTGAC
TTGTTCGCGGATGCATGTACAGTAGTATATTGTAGTATATATAAAGAAACTGGGGCGCTGCAGGCTGCATCTGCCCGCAC
AAGTAGAATCCATGGCGGCGGCGATCCCCATTCTTCTCCTCACCTTCCTCCTCGCGGCGGCAACGCCATCGGCCGGGCCT
TCATACGTCATCAAGACGACGTGCGCAGCGGTGACCAATGCCACCGTGGGTACGCCCTACAGATACTGCGTCCGCACGCT
CTCGGCCAACCCCGCGGCCGCCGCCGCCAAGGACGCCCGCGGGCTTGCCATCGCGGCGACCAACCTCACCGCCACCAACG
TCACGTCGACGGAGCTAACCATCACCAGGCTAATCGACGCCCTCTACAACTGCCTCGTCACCTACCAAAGCATGCAAGCA
TCAATCGCCGGGGCGCTCCAAGACTTGAACGCCGGCCGCTTTGACGTGGCATCGCCCAAGCTCAGGGACGCTTCGTTTCA
GCCGGACTTCTGTGAACTGGCGATGATGGAAAGCGACACCGACAAGGACCCCATGTCGGACGAGAACAATGCAAACTATT
TGGTGTCCGGCATGGCGTATAACATCGCGGAACTCATCGCCCGCCATGCCGCCAAATGAAGAATTAATGCCGCACGCTGG
CAGTAGTTGATTCTTGTCTTCCTTAATAATCCTTATTATTAGGTAGTACTACACACGTTAATCATGTCTTGCGTTAACCA
AGTTAATATTTCACCATTTTACTTTGTCAGTTTTTCTCATTACTTAATTATGCATCAGTCATGTTGATCGAGTGCTGTAA
ACGGACCATATGATCAATCGAATTGTGTTGCGATTCTTGATGTATCACCTTCATTTCTGTGGATTAAGATTTATCCAAGG
AAGAGACCTTTTTTGTGTTCACAAAAGCTTAATGGCTTCAGCAGCCTCTCAATTCTTCTAAATAGGCATCAACCCGTCCC
ACTTTGGTTCAAGATGATTGTGATATTGCTCACAATCTTAAGCTTATCCTATGTTCGTCTGAACGAAAAAGCTAAAATCC
TGACGGCAGGAATTCTGCAACAGATCCAAAAGCATTGGATCTCATTCGTTCTAGATCGTTCGGTCGTGCGCGACCCCGTG
TTTCCTTTTTTCTCCCGCAGTTTTTGCTCTCGCTCCCGATGATTTCCTTCACCGCGGTCGCTCAGAATGAGCAGAAAGTT
GTTTTCTAATGCAAAAATAAGATCTACGTGGGAATCGATAACCCATTCCCATGGTAGAGAAATTTGGCAA--CTACCCAA
CTCACCTACCGCTTGTTTTGTGGTGACTATAGGATAATCATACTATTTTCACTTGGTTCATCTATGCTATAATAGCCAAC
CTTCGTTCAACGAAAATTTGATCACGTGGTTTCTCTGACTTGTTCGATGCTGATAATTTTGTAGTTAAGTTGTAGCCCGC
GGAATAGTTATCAACTTCCTAAAGCTACAGTTATCATCATTGTTTTATATAGTTATTAGCACGCTCATGTCATAGTTACC
AAACTGTTTATGTTCAAGCTATCTAGCTGCTCATTTTGTGGTTACCAGAGGTTGATCCCGATATTTTCTCGTGGGCAGCA
GCGATTTTGTTTTTTTGGC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
------------------------------------------S--------S--------S-------------------
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--S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
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------------------S------------------------------------------------------------S
------------------------------------------------------------S-------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS------------------------------------SSSSSSSS--------S-------------------
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---------------------------------------------------------------------S----------
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------------------------------------------------------------------------------S-
--------------------------------------------------S-----------------------------
------------------------------------------------------------------S-S-----------
----------------------------S---------------------------------------------------
----------------------------------------------------S---------------------------
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------S------------S------------------------------------------------------------
---S-------S--------------------------------------------------------------------
-------------------------------S-------------S----------------------------------
----------------------------------------------------------------------SS--------
---------------------------------------S----------------------------------------
-------------------S------------------------------------------------------------
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----------------------------------S--------------------------------------S------
--------S----------
>forward_92
------------------------------------------------------------------------TGGAACCG
GCACTAATGGAC--------------------------------------------------------------------
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>reverse_1749
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--------------------------------------------------------------------GTGCAAACTATT
TGGTGTCCGG----------------------------------------------------------------------
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>forward_93
-------------------------------------------------------------------------GGAACCG
GCACTAATGGACA-------------------------------------------------------------------
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>reverse_1789
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----------------------------TGAACTCATCGCCCGCCAT---------------------------------
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>forward_115
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---------------TTAGTGCCGGCTCAAAACCA---------------------------------------------
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>reverse_1893
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----------------------------------------------------TCACGTTAATCATGTCTTGCGT------
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