>input_sequence_77266
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------------------------------------------------------------------------ATGCCTAA
ACTGGAAAAGTCCTATCTCAGCTGCCAGCCAACATTCTCTGTTAGCCATCTATGCCAGGTAATCACTAATCACTTGCTTC
CACACACTTGCCATCTGTATTGTGACATAACTTTGGTGGACATAGATCGAAATGAGTAAGCGAAGACTCTGCTTACTCTG
TTTCTTCGTGCGTTGTTTCAGTTTGTTGCTCTTCAGCTTTC---------------------------------------
--------------------------------------------------------------------------------
-------------------ACGTCAAGCCGCAGAGGTGGAGATATACTTCAGGAAGAACTCCAT----------------
AAACGGGTCGCTTAAAACCGAAGACACCAGCGCAGACAACGAGGC-----------------------------------
-------AAAAA-TGGAGCGGCTCGACGGCCTGG-AAAGA-CTCAAGGAAGAGAGTTCGCTTTTCGAGCTTTACCCTATG
CTCGCCTCTGGTGTTGGAGACCTGGTAATTTCCATTTCTAATTGATTGCCTAATAACTAACTGTTTCTTTTCGCCATTGC
TTCAGCATCCTAATGATCTGTATGTACCGTTTCCCTCCCAACGTCCAGGAGCTATTGTACTCTGTGAAAGCGCAAGGCTA
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------
>chr7D_1_TraesCS7D01G295600
TCTGGACTTGTGCCCAGGCTCCTTCTAAACTCCTCGCGTCTCCTTCGTCTTCAACCAACAGCAGCGACCCCGTTTTAGTT
CCTCTTCGAAACAGCAACAACCGCGCTAGAAGTTCAGAATTGCAGATGGCAAAGTCCAACTTCGGTTGTGGATGCATCCT
CTCTTGTGGTAGAAGGGCAGGTCTGTAGACCTTGTACAAGAAAAGCGACTAAATATAGTATTACACGGTGCCGCCACCCT
GGACCATCTGCTCCCGCGCGTG----AGCAACCAATGCGCTGATGCCTAGCAGTGTACAAATCTTCTGATTTCTTGCAGC
AGTTCAATGTA---------------------------------------------------------------------
--------------TATTAGAGTGGAAAGAAGAGAAAAGAAGAGTATGTTGCAGATGTGGTGCTTGTGATTGTTGTAGGC
TTGCAACAGTTTAGATTGTGGGGTCAATGAAAAAATTGTCCCTAGTTTACATGAATCTTGCAGAAATTAAAGTGGTGTAT
GA-----------------------------------------------------------TGATTTGGGAGGTGCCAGA
GATATCTTGGCTACTTCTCCACTGCGGGGAGAGATGCTTGCCTGGGGCAAAAAATGGCACCCGCAGCCAAACTCGACATG
GTAATGCCGGTGGCTCCAGTGGAAGGATGGTTAAGGGTCGGCGTGTTGCCAAGT--------------------------
--AGGTGGATCATCTCCGTAATGCTGATGAATTTGATACCAAGGTAACAACAGACAGTCGCAACAGTTTAAATTTACAGT
TTCTCTTCC------AAAAAATAATCTGAGTTGCTATTTCG--TACTTATGCTTTGGAAGATTCAGATTGCTAA---ACA
TTCTAAAAAG------GCATCCTGTTGTTCGTA-TGTGTTATTCTGGTGTGTTTTGTAGTGTTGCACAGACAATATAAAA
CATCAGCACATGCACATACATGGCTACCTGGGCTAGGCCAATCTTGTACAAGCAGTGGCCCGTGGTTTACGTCCATTAGG
TTTGCTGAATATGTCTGTTCTGTTGTGCAGTTCAACCTCTATCTTGCTCTAACTCCGCTTGATGGGCAAAGCATGCCTAA
ACTGGAAAAGTCCTATCTCAGCTGCCAGCCAACATTCTCTGTTAGCCATCTATGCCAGGTAATCACTAATCACTTGCTTC
CACACACTTGCCATCTGTATTGTGACATAACTTTGGTGGACATAGATCGAAATGAGTAAGCGAAGACTCTGCTTACTCTG
TTTCTTCGTGCGTTGTTTCAGTTTGTTGCTCTTCAGCTTTC---------------------------------------
--------------------------------------------------------------------------------
-------------------ACGTCAAGCCGCAGAGGTGGAGATATACTTCAGGAAGAACTCCAT----------------
AAACGGGTCGCTTAAAACCGAAGACACCAGCGCAGACAACGAGGC-----------------------------------
-------AAAAA-TGGAGCGGCTCGACGGCCTGG-AAAGA-CTCAAGGAAGAGAGTTCGCTTTTCGAGCTTTACCCTATG
CTCGCCTCTGGTGTTGGAGACCTGGTAATTTCCATTTCTAATTGATTGCCTAATAACTAACTGTTTCTTTTCGCCATTGC
TTCAGCATCCTAATGATCTGTATGTACCGTTTCCCTCCCAACGTCCAGGAGCTATTGTACTCTGTGAAAGCGCAAGGCTA
GCTACGCACAGTTCCTGGCACCAGCCAGCTAGCT----CTCTTGGCCGTCAAATTGATGGATGGATGGAT----------
--CGCCGCTAATCCCATGACCTGCAGGAAGGATCTACTCGCCGTGAAAAAATGTACATATATCATCATTCGATATGGA--
AAAG-A-GGGGCGGCAAAGTAGAAGTATTTATCATCCGTGTCTTAATGTTTGTTTGAG--TATATGTGTTTTATCTTGTG
GAGTGGTTCGTTGGTTGGTTAAAACGTAAAATTGACTAGTAG---TCGAATTG---AGTAGCAGTGTGTAAAACAGGTCA
GACAAAATTACCTGGC----TGGTTCATTCCTTCTTCTATA----CTGTATAATTATTATAAAATGTATTGGCTGGCGCT
GCACATGCAGCGGTAATTCTTCTTGGACTCCGCCG-AACTCGAATCCATCTGATGAGTGAATGTGATTGTTGTAGGCTTG
CAATAGTTTAGATTGTGGGGTTAATGAAACAATTGTCCCTAGTTTACTTGAATCTTGCAGAATTTAAAGTGGTGTATGCA
CTATGGATTTT-TTTTCTGTTACAAAAATAAATAAAACCAAGAAGTCTAAATTAAAAAGATGGAGCAGCTCGATGATTAT
AGCAAACTCAAATTTTGGTCCCTATTAAAGAATGGAAATAAGAAGTTCAAAATTAAATCACACAATGGTTCAATGTATAA
AAATTAAATCACATCATAAGAAGGTCAGGAAAGAG--TAACACAGAAGTTCAAAAGAT-AACATGGCACTTTGAAGTGGG
TATTTCACCGTTTCTTCA-CAAAAAGCATGAAGTTCAAATTCTAAAAATAGAGCAGTTGAAAAATCATAAAAAAGGATTT
T-CATCGTTTCTAAAT-AAAAAAACACTAGAAGTTCATATTTAAAATAACAAACCGGTTCAATACTTATTACAAACTAGG
ATATTCCCG-------AAGAAATAAACCAAGAAGTCCAAATTACAAAAATAGCGAAGTTTGTTGTTTAT-AAAAAACTCA
CATTTTCTTGGTA
>chr5D_1
TCTGGACTTGTGCCCAGGCTCCTTCTGAACTCCTCGCGTCTCCTTCGTCTTCGACCAACAACAGCGACCCCGTTTTAGTT
CCTCTTTGAAACAGCAGCAGCCACGCTAGAAGTTCAGAATTGCAGATGGCGACGTCCAACTTCGGTTGTGGATGCATCGT
CTCTTGTGGAAGAAGGGCAAGTCTGTAGACCTTGTAGAAGACAAGTGACTGAAAATGGTATTACATGGTGCCGCCACCCT
GGACCACCTGCTCCCGCGCATGAGCAAGCAACCAATGCGCCGATGCCTAGCAGTGTACAAATCTTCTGATTTCTTGCAGC
AGTTCAATGTACTCCCTCCGTCCCATAATATAAGAACGTTTTTGATACCAGTGTAGTGTTAAAAATGTTCTTATATTTTG
GGACAGAGGGAGTATATTAGAGTAGAAAGAAGAAAAACAAT-AGTATGTTGCAGATGTGGTGCTTGTGATTGTTGTAGGC
ATGCAACAGTTTAGATTGTAGGGTCAATG-AAAAATTGTCCCTACTTTACATGAATCTTGCAGAA-TTAAAGTAGTGTAT
GCACTATGGCACTTACTAGAA-AAAATCGTCTCCAAACTACTCAATACTATTGTTGTCTGTTAATTAGGCAGGATCTGGT
GGCATTCTG------------------------------------------------------------------ACTTG
GTACTGTTGTTGCTATCAATTACTATGCACCACTAAATTAACTATCAACTACTATGCACCA-------AATTAGGCAAGA
TCTGGTGGAGCACCAAGTTAGTATTGTT----------------------------------------------------
-----------------------------GTTGCTATCCTG--TACTTGCATTCAG------------------------
-----------------------------------------------------------------GCATCCAACATAATG
--------------------------------------------------------------------------------
----------------------------AATTCTAGCTGCCTGTAA----------------------------------
----------------------------------------------------------GTAATCA---------------
--------------------------------------------------------------------------------
--TCTTCGTGTGTTAGTGCTGTTGTTGACCAGTACTACTAAGAAGTGATCCTTATGCTCCCCTAAAAAAGAGAAAAGTAC
TCGTTCTTCCACTACTTGCAACACTCGCTCATGTCCAACAAGACATGAGTAGCATTCAGACATCCAACGGAAATAAAAA-
--CTTTGGAAGTGAGCCAAACGATCAAACCTAGAGGTTCAAATTTAAAAGATGAAGAAGTTCAATGTTTATTACAAACCA
AATAAGGTCAAAATAAAAAACCAAAACCATCTCAAACAATTTTATAAAAAAAGGACACCATT-AAAAAACCTAGAAGTTC
AAATAAAAAAAA-TGGAGCAGCTCGATGTTCATTAAAAA--CAAGGA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TT-TTTTCTGTTACAAAAATAAATAAAACCAAGAAGTCCAAATTAAAAAGATGGAGCAGCTCGATGATTAT
AGAAAACTCAAATTTTGGTCCCTATTAAAGAATGGAAATAAGAAGTTTAAAATTAAACCACACAATAGTTCAATGTATAA
ATATTAAATCACATCATAAGAAGTTCAGGCAAAAAA-TAACACAGGAGTTCAAAAGAT-AACATGGCACTTTGAAGTGGA
TATTTCACCGTTTCTACATAAAAAA-CAAGAAGTTCAAATTCTAAAAATAGAGCAGTTCAAAAACCATAAAAAGGA--TT
TTCACCCTCTCTAAAT-AAAAAAACACCAGAAGTTCATATTTAAAATAATGAACCGGTTCAATACTTATTACAAACGAGT
ATATTCCCGTTAGTAAAAGAAATAAACCAAGAAGTCCAAATTACAAAAATTGAGAAGTCCGCTGTTTATAAAAAAACTCA
CATTTTCTTGGTA
>chr1A_347
GAAAATGC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AT-AGTATGTTGTAGATGTGATGCTTGTGATTGTTGTAGGC
TTGCAATAGTTTAGATTGTGTGGTCAATGAAAAAATTGTCCCTAGTTTACATGAATCTTGCAGAAATTAAAGTGGTGTAT
GCACTATGACACTTACTGGAA-AAAATCGTCTCCAAACTACTCAATACTATTGTTGTTTGTTAATTAGGCAGGATCCGGT
GGCATTCTA------------------------------------------------------------------ACTTG
GTAATGTTGTTGCTATCAATTACTATGCACCACTAAATTAACTATCAACTACTATGTACCACTAAATTAATTAGGCAAGA
TCTGGTGGAGCACCAAGTTAATATTGTT----------------------------------------------------
-----------------------------GTTGCTATCCTG--TACTTGCATTCAG------------------------
-----------------------------------------------------------------GCATCCAACATAATG
AATTCTAGCTG---------------------------------------------------------------------
---------TCTGTAAGTTTTTTTGAGTAATTCTAGCTGCCTGTAA----------------------------------
----------------------------------------------------------GTAATCA---------------
--------------------------------------------------------------------------------
--TCTTCCTGTGTTAGTGCTGTTGTTGACCAGTACTACTAAGGAGTGCTCCTTCTG-----------------------C
TCGTTCTTCCACTGCTTGCAATACTCGCTCATGTCCAACAAGACATGAGTAGCATTCAGACATCCAACAGAAATAAAAAA
AACTCTAGAAGTGAGCCATCCGATCAAACCTAAAAATTCAAATTTAAAAGATGAAGAAGTTCAATGTTTATTACAAACCA
AATAAGGTCAAAATAAAAAAATGAAACCATCTCAAACAATTTTATAA-AAA-GGACACCATTAAAAGAACCTAGAAGTTC
AAAATTGAAAAA-TGGAGCACCTCGATGTTCATTAAAAAA-CAAGGA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TT-TTTTCTCTAACAAAAATAAATAAAACCAAGAAGTCCAAATTAAAAAGATGGAGCAGCTCGATGATTAT
GGAAAACTCAAATTTTGGTCCCTGTTAAAGAATGGAAATAATAAGTTCAAAATTAAATCACAAAAAAGTTCAATGTATAA
ATATTAAATCACATCATAAGAAGTTCAGGCAGATAAATAACACAGGAGTTCAAAAGATAAACATGGCACTTTGAAGTGGA
TATTTCACCGTTTCTACA-AAAAAA-CAACAAGTTCAAATTCTAAAAATAGAGCAGTTCAGAAACCATAAAAAGGA--TT
TTCCTCGTCTCTAAAT-AAAAAAACACTAGAAGTTCATATTTAAAATAACGAACCGGTTTAATACTTATTACAAATTAGG
ATGTTCCCGTTACTAAAAGAAATAAACCAAGAAGTACAAATTACAAAAATAGAGAAGTTCGCTGTTTAT-AAAAAACTCA
CATTTTCTTGGTA
>chr6A_356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGTATGTTGCAGATGTGATGCTTGTGATTGTTGTAGGC
TTGCAACAATTTAGATTGTGAGGTCAATGAAAAAATTGTCCCTAGTTTACATGAATCTTGCAGAAATTAAAGTGGTGTAT
GCACTATGACACTTACTGGAA-AAAATCGTCTCCAAACTACTCAATACTATTGTTGTCTGTTAATTAGGCAGGATCTGGT
GGCATTCTG------------------------------------------------------------------AGTTG
GTACTGTTGTTGCTCTCAATTACTATGCACCACTAAATTAACTATCAACTACTATGCACCACTAAATTAATTAGGCAAGA
TCTGGTGGAGCACCAAGTTAGTATTGTT----------------------------------------------------
-----------------------------GTTGCTATCATG--TACTTGCATTCAA------------------------
-----------------------------------------------------------------GCATCCAACATAATG
AATTCTAGCT----------------------------------------------------------------------
--------------------------------------GCCTGTAA----------------------------------
----------------------------------------------------------GTAATCA---------------
--------------------------------------------------------------------------------
--TCTTCCTATGTTAGTGATGTTGTTGACCAGTACTACCAAGAAGTGCTCCTTTTG-----------------------C
TCGTTCTTCCACTACTTGCAATACTCGCTCATGTCCAACAAGACATGAGTAGCATTCAAACATCCAACGGAAATAAAAA-
--CTCTGGAAGTGAGCCATCCGATCAAACCTAAAGGTTCAAATTTAAAAAATGAAGAAGTTCAATGTTTATTACAAACCA
AATAAGGTCAAAATAAAAAAACGAAACCATCTCAAACAATTTTATAA-AAAAGGACACCATTAAAAAAACCTAGAAGGTC
AAAATTGAAAAAATGGAGCAGCTCAATGTTCATTAAAAAA-CAAGGA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TT-TTTTCTGTTACAAAAGTAAATAAAACCAAGAAGTCCAACTTAAAAAGATGGAGCAGCTCGATGATTAT
AGAAAACTCAAATTTTGCTCCCTATTAAAGAATGGAAATAATAAGTTCAAAATTAAATCACAAGATAGTTCAATGTATAA
ATATTAAATCACA-CATAAGAAGTTTAGGCAAAAAAATAACACAGGAGTTCAAAAGATAAACATGGCACTTTGAAGTGGA
TATTTCACAGTTTCTACA-AAAAAA-CAAGAAGTTCAAATTCTAAAAATAGAGCAGTTCAAAAACCATAAGAAAGGATTT
T-CATCGTCTCTAAATAAAAAAAACACTAGAAGTTCATATTTAAAATAACGAACCAGTTTAATACTTATTACAAACTAGG
ATATTCCTGTTACTAAAAGAAATAAACCAAGAAGTCCAAATTACAAAAATAGTGAAGTTCGTTGTTTAT-AAAAAACTCA
CATTTTCTTGG--
>chr6B_356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGTATGTTGCAGATGTGATGCTTGTGATTGTTGTAGGC
TTGCAACAGTTTAGATTGTGGGGTCAATGAAGAAATTGTCCCTAGTTTACATGAATCTTGCAGAAATTAAAGTGGTGTAT
GCACTATGACACTTACTGGAA-AAAATTGTCTCCAAACTACTCAATGCTATTGTTGTCTGTTAATTAGGCAGGATCTGGT
GGCATTCCG------------------------------------------------------------------ACTTG
GTACTATTGTTGCTATCAATTACTATGCACCACTAAATTAACTATCAACTACTATGCACCACTAAATTAATTAGGCAAGA
TCCGGTGGAGCACCAAGTTAGTATTGTT----------------------------------------------------
-----------------------------GTTGCTATATTG--TACTTGCATTCAG------------------------
-----------------------------------------------------------------GCATCCAACATAATG
AATTCTAGCT----------------------------------------------------------------------
--------------------------------------GACTGTAA----------------------------------
----------------------------------------------------------GTAATCA---------------
--------------------------------------------------------------------------------
--TCTTCCTGGGTTAGTGTTGTTGTTGACCAGTACTACTAAGAAGTGCTCCTTCTG-----------------------C
TCGTTCTTCCACTACTTGCAATACT------------ACAAGACATGAGTAGCATTCAGACATCCAACAGAAATAAAAA-
--CTCTGGAAGTGAGCCATCCGATCAAACCTAAAGGTTCAAATTTAAAAGATGAAGAAGTTCAATGTTTATTACAAACCA
AATAAGGTCAAAATAAAAAA-CAAAACCATCTCAAACAATTTTATAATAAAAGGACACCATTAAAAAAACCTGGAAGTTC
AGAATTGAAAAAATGGAGCAGCTCGATGTTCATTAAAAAA-CAAGGA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTTTTTTCTGAAACAAAAATAAATAAAACCAAGAAGTCCAAATTAAAAAGATGGAGCGGCTCGATGATTAT
AGAAAACTCAAATTTTGGTCCCTGTTAAAGAATGGAAATAAGAAGTTCAAAATTAAATCACACAATAGTTCAATGCATAA
ATATTAAATCATATCATAAGAAGTTCAGGCAAAAACATAACACATGAGTTCAAAAGATAAACATGGCACTTTGAAGTGGA
TATTTCACCATTTCTACAAAAAAAA-CAAGAAGTTCAAATTCTAAAAATAGAGCAGTTCAAAAACAATAAAAAGGA--TT
TTCACCGTCTCTAACT--AAAAAACACTAGAAGTTCATATTTAAAATAACGAACCGGTTTAATACTTATTACAAACTAGG
CTATTCCCGTTACTAAAAGAAATAAACCAAGAAGTGCAAATTACAAAAATAGAGAAGTTTGTTGTATAT-AAAAACCTCA
CATTTTCTTGGTA
>chr5A_356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGTATGTTGCAGATGTGATGCTTGTGATTGTTGTAGGC
TTGCAACAGTTCAGATTGTGGGGTCAACGAAAAAATTGTCCCTAGTTTACATGAATCTTGTAGAAATTAAAGTGGTGTAT
GCACTATGACACTTACTGGAAAAAAATCGTCTCCAAACTACTCAATAATATTGTTGTCTATTAATTAGGCAGGATCTGGT
GGCATTCTG------------------------------------------------------------------ACTTG
GTACTGTTGTTCCTATCAATTACTATGCACCACTAAATTAACTATCAACTACTATGCACCACTAAATTAATTAGGCAAGA
TCTGGTGGAGCACCAAGTTAGTATTGTT----------------------------------------------------
-----------------------------GTTGCTATCATG--TACTTGCATTCAG------------------------
-----------------------------------------------------------------GCATCCAACATAATA
AATTCTAGCT----------------------------------------------------------------------
--------------------------------------GCCTGTAA----------------------------------
----------------------------------------------------------GTAATCA---------------
--------------------------------------------------------------------------------
--TCTTCATGTGTTAGTGTTGTTGTTGACCAGTACTACTAAGAAGTGCTCCTTCTG-----------------------C
TCATTCTTCCACTACTTGCAATACTGGCTCATGTCCAACAAGATATGAGTAGCATTCAGACATCCAACGGAAATAAAAA-
--CTCTGGAAGTGAGCCATCCGATCAAACCTAAAGGTTCAAATTTAAAAGATGAAGAAGTTCAATGTTTATTACAAACCA
AATAAGTTCAAAATAAAAAAATGAAACCATCTCAAACAATTTTATAA-AAAAGGACACCATTAAAAAAACCTAGAAGTTC
AAAATTGAAAAATTGGAGCAGCTCGATGTTCATT-AAAAA-CAAGGA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TT-TTTTCTGTTACAAAAATAAATAAAACCAAGAAGTCCAAATTAAAAAGATGGAGCAGCTCAATGATTAT
AGAAAACTCAAATTTTGCTCCCTGTTAAAGAATGGAATTAATAATTTCAAAATTAAATCACAAAATAGTTCAATGTATAA
ATACTAAATCACATCATAAGAAGTTCAGGCAAAAAAATAACACAGGAGTTTAAAATATAGACATGGCACTTTGAAGTGGA
TATTTCACCATTTCTACAAAAAA-A-CAAGAAGTTCAAATTATAAAAATAGAGCAGTTCAAAAACCATAAAAAAGGATTT
TTCATCGTCTCTTAAT--AAAAAACACTAGAAGTTCATATTTAAAATAACGAACCAGTTTAATGCTTATTACAAACTAGG
ATATTCCCGTTACTAAAAGAAATAAACCAAGAAGTCCAAATTACAAAAATAGAGAAGTTCACTATTTAT-AAAAAACTCA
CATTTTCTTGGTA
>chr1D_407
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GATTGTGGGGTCAATGAAAAAATTGTCCCTAGTTTACATGAATCTTGCAGAAATTAAAGTGGTGTAT
GCACTATGACACTTATTGG-AAAAAATCGTCTCCAAACTACTCAATACTATTGTTGTCTGTTAATTAGGCAGGATCTGGT
GGCATTCTG------------------------------------------------------------------ACTTG
GTACTGTTGTTGCTATCAATTACGATGCACCACTAAATTAACTATCAACTACTATGCACGACTAAATTAATTAGGCAAGA
TCTGGTGGAGCACAAAGTTAGTATTGTT----------------------------------------------------
-----------------------------GTTGCTATCCTG--TACTTGCATTCAG------------------------
-----------------------------------------------------------------GCATCCAACATAATG
AATTCTAGCT----------------------------------------------------------------------
--------------------------------------GCCTGTAA----------------------------------
----------------------------------------------------------GTAATCA---------------
--------------------------------------------------------------------------------
--TCTTCCTGTGTTAGTGCTGTTGTTGACCAGTACTACTAAGAAGTGCTCCTTCCG-----------------------C
TCGTTCTTCCACTACTTGCAATACTCGCTCATGTCCAACAAGACATGAGTAGCATTCAGACATCCAACGGAAATAAAAA-
--CTCTGGAAGTGAGCCATCCGATCAAACCTAAAGATTCAAATTTAAAAGAAGAAGAAGTTCAGTGTTTATTACAAACCA
AATAAGGTCAAAATAAAAAAAAAGAACCATCTCAAACAATTTTATAA-AAAAGGACACCATTAAA-AAACCTAGAAGTTC
AAAATTGAAAAAATGGAGCAGCTCGATGTTCATT-AAAAAACAAGGA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TT-TTTTCTGCTACAAAAATAAATAAAACCAAGAAGTCCAAATTAAAAAGATGGAGCAGCTCGATGATTAT
AGCAAACTCAAATTTTGGTCCCTGTTAAAGAATGGAAATAATAAGTTCAAAATTAAATCACAAAATAGTTCAATGTATAA
ATATTAAATCACATCATAAGAAGTTTAGGCAAAAAAATAACACAGGAGTTCAAAAGATAAACATGGCACTTTGAAGTGGA
TATTTCACCGTTTCTACAAAAAA-A-CAAGAAGTTCAAATTCTAAAAATAGAGAAGTTCAAAAACCGTAAAAAAGGATTT
T-AATCGTCTCTAAATGAAAAAAACACTAGAAGTTCATATTTAAAATAACGAACCGGTTTAATACTTATTACAAACTAGG
ATATTCCCGTTACTAAAAGAAATAAACCAAGAAGTCCAAATTACAAAAATAGAGAAGTTCGCTGTTTAT-AAAAAACTCA
CATTTTCTTGGTA
>chr1A_472
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GA-----------------------------------------------------------TGATTTGGGAGGTGCCAGA
GATATCTTGGCCACTTCTCCACTGCGGGGAGAGATGCTTGCCTGGGGCAAAA-ATGGCACCCGCAGTCAAACTCGACATG
GCAGTGCCGGTGGCTCCAGTGGAAGGATGGTCAAGGGTGGGCGTGTTGCCAAGT--------------------------
--TGGTGGATCATCTCCGTAATGCTGATGAATTTGATACTAAGGTAACAACAGATCGCCG--ACATTTTAAATTTACAGT
TTCTCTTCG------AAAAAATAATCTGAGTTGCTATTTCG--TACTTATGCTTTGGAAGATTCAGATTAGTACTAAACA
TTCTAAAAGGCTGGATCCGTCCTGTTATCCGTATCGTGTTATTCTGGTGTGTTTTGTAGTGTTGCACAGGCAATATAAAA
CATCAGCACATGCACATACAC----ACCTGGGCCAGGCCAATCTTGTACAAGCAGTGGCCCGTGGTTTACGTCCATTAGG
TTTGCTGAATATGTCTGTTCTGTTGTGCAGTTCAACCTGTACCTCGCTCTAACTCCGCTTGATGGACAAAGCATGCCTAA
ACTGGAAAAGTCCTATCTCAGCTGCCAGCCAACATTCTCTGTTAGCCACCTATGCCAGGTAATCACTGATCACTTGCCTC
CACACACTTGCCGTTTGTAATGTGACACGACTTTGGTGGGCATAGATCGAAATGAATAAGCGAAGACCCTGCTTACCCTG
TTTCT----GCGTCGTTTCAGTTTGTTGCTCTTCAGCTGTC---------------------------------------
--------------------------------------------------------------------------------
-------------------ACGGCAAGCCGCAGAGGTGGAGATATACTTCAGGAAGAACTCCATG---------------
-AACGGGTCGCTTAAAACCGAAGACACCAGCGCAGACGACGAGGC-----------------------------------
-------AAAAC-CGGAGCGGCTCGACGGCCTGG-AAAGG-CTCAAGGAGGATAATTCGCTTTCAGAGCTTTACCCTAAG
CTTGCCTCTGGTGTTGGGGACCTGGTAATCCTACCTCTGAATTGACTGCCTGTT---TAACCGCTTCTTTTCCCCATTGC
TTCGGCATCCTAATGATCTGTATGTACCGTGTCCCTCCCAACGTCCAGGAGCTGCTGTACTCTGTGAAAGCACAAGCCTA
GCTACGCACAGTTCCTGGCACCAGCCAGCTACATA----TCTTGGCCGTCAAATTGATGGATGGATGGAT----------
--CGCCGCTAATCCCATGACCTGCAGGAAGGATCTACTCGCCGTGAAAACCTGTACATATATCATCATTCGATATAGA--
AAAAAAGGGGGCGACAAAGTAGTAG-ATTTATCATCTGTGTCTTAATGTTTGTTTAAATTTATGTGTGTGTTATCTTGTG
GAGTGGTTCATTGGTGGGTTAAA-CGTAAAATTGACCA---GTAGTCGAATTG---AGTAGCAGTGTGTAAAACAGGTCA
GACAAAATTACCTGGC----T----CATTCCTTATTCTATA----CTGTATAATTATAATGTACTGTATTTGGTGGCGCT
GCACATGCAGTGGTAATTCTTCTTGGACTCCGTCT-AACTCGAACCCGTGTGATGAGTGAATGAGAATTG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr1D_472
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GA-----------------------------------------------------------TGATTTGGGAGGTGCCAGA
GATATCTTAGCCACTTCTCCACTGCGGGGAGAGATGCTTGCCTGGGGCAAAA-ATGGCACCCGCAGCCAAACTCGACATG
GCAGTGCCGGTGGCTCCAGTGGAAGGATGGTCAAGGGTGGGCGTGTTGCCAAGT--------------------------
--TGGTGGATCATCTTCGTAATGCTGATGAATTTGATACCAAGGTAAAAACAGACCGTCGCAATAGTTTAAATTTACAGT
TGCTTCCTGTTGCAAA---AATAAGTAGAGTTCGTATTTTTTTTATTTGTGCTTTGGAAGATTCAGATTACTAATAAACA
TTCTAAAAGGCTGGATGCATCCTTTTGTCCGTATCGTGTTATTCTGGTGTGTTTTGTAGTGTTGCGCAGGCAATATAAAA
CATCAGCACATGCACATACCTGGGCTCACTAGGCCAA--AATCTTGTACAAGCAGTGGCCCGTGGTTTACGTCCATTAGG
TTTGCTGAATATGTCTGTTCTGTTGTGCAGTTCAACTTGTACCTTGCTCTAACTCCGCTTGATGGACAAAGCATTCCTAA
ACTGGAAAAGTCCTATCTCAGCTGCCAGCCAACATTCTCTGTTAGCCACCTATGCCAGGTAATCACTAATCACTTGCT--
------------GTTTGTAATGTGACACAACTATAGTGGACATAGATCGAAATGAATAAGCGAAGACTCTGCTTACCCCG
TTTCT----GCGTCGTTTCAGTTCGTTGCTCTTCAGCTGTC---------------------------------------
--------------------------------------------------------------------------------
-------------------ACGGGAAGCCCAAGAGGTGGAAATATACTTCAGGAAGAACTCCAT----------------
AAACGGGTCGCTTAAAACCGAAGACACCAGCGCAGACGGCGAGGC-----------------------------------
-------GAAAC-CGGACCGGCTCGACGGCCTGG-AAAGG-CTCAAGGAAGAGAATTCGCTTTCGGAGCTTTACCCTATG
CTCGCCTCTGGTGTTGGAGACCTGGTAATTTCCATTTCTAATTGACTGCCTAATAACTAACCGCTTCTTTTCGCCATTGC
TTCAGCATCCTAATGATCTGTATGTGCCGTTTCCCTCCCAACGTCCAGGAGCTGCTGTACTCCGTGAAAGCACAGGGCTA
GCTAGGCACAGTCCGTGGCACCAGCCAGCTAGCTAACTCTCCTGGCCGTCAAATTGATGGATGGATGGAT----------
--CGCCGCTAATCTTATGACCTGCAGGAAGGATCTACTCGCCGTGAAAACATGTACATATATCATGATTCGATATAGG--
AAAAAA-GGGGCGACAAAGTAGTAG-ATTTATCATCCGTGTCTTAATGTTTGTTTAAGTTTATGTGTGTTATATCTCGTG
GAGTGGTTCATTGGTTGGTTAAAACATAAGCTTGACTAGTGGTAGTCGGATTG---CGTAGCA--GTGTAAAACAGGTCA
GACAAAATTTAC---CTGGTT----CATTCCTTATTCTATA----CTGTATAATTATAATGTACTGTATTTGGTGGCGCT
GCGCATGCAGCGGTAATTCTTCTTGGGCT-CGTCT-AACTCGAACCCATCTGAGGAGTGAATGTGAATTG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr1B_472
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GA-----------------------------------------------------------TGATTTGGGAGGTGCCAGA
GATATCTTGGCCACTTCTCCACTGCGGGGAGAGATGCTTGCCTGGGGCAAAA-ATGGCACCCGCAGCCAGACTCGACATG
GCAGTGCCGGTGGCTCCAGTGGAAGGATGGTCAAGGGCGGGCGTGTTGCCAAGT--------------------------
--TGGTGGATCACCTCCGTAATGCTGATGAATTTGATACCAAGGTAAAAACAGACCGTCGCAATAGTTTAAATTTACAGT
TGCTTCCTTTTGCAAAAATAATAAGTAGAGTTGGTATTTATTTTATTTGTGCTTTGGAAGATTCAGATTACTAATAAACA
TTCTAAAAGGCTGGATGCGTCCTTTTGTCCGTA-CGTGTTAATCCGGTGTGTTTTGTAGTGTTGCACAGGCAATATAAAA
CATCAGCACATGCACATACATGGCTACCTGGGCCAGGCCAATCTTGTACAAGCAGTGGCCCCTGGTTTACGTCCATTAGG
TTTGCTGAATATGTCTGTTCTGTTGTGCAGTTCAACTTGTACCTCGCTCTAACTCCGGTTGATGGACAAAGCATGCCTAA
ACTGGAAAAGTCCTATCTCAGCTGCCAGCCAACATTCTCTGTTAGCCACCTATGCCAGGTAATCACTGATCACTTGCCTC
CACACACTTGCCGTTTGTAATGTGACACAACCTTGGTGGGTATAGATCGAAACGAATAAGCGAAGACCCTGCTTACCCTG
TTTCT----GCGTCGTTTCAGTTCGTTGCTCTTCAGCTGTC---------------------------------------
--------------------------------------------------------------------------------
-------------------ACGGCAAGCCCAGGAGGTGGAGATATACTTCAGGAAGAAGGCCGGC---------------
-AACGGGTCCCTTAAAACCGAAGAAAACAGCGCAGGCGACGAGGC-----------------------------------
-------GAAAC-CGGAGCGGCTCGACGGCCTGG-AAAGG-CTCAAGGAAGAGAATTCGCTTTCAGAGCTGTACCCTATG
CTCGCCTCTGGTGTTGGAGACCTGGTAATTTGCATTTCCAGTTGACCGCCTAATAACTAACCGCTTCTTTTCGCCATTGC
TTCAGCATCCTAATGATCTGCATGTACCGTGTCCCTCCCAACGTCCAGGAGCTGCTGTACTCCGTGAAAGCGCAAGCCTA
GCTAGGCACAGTCCGTGGCACCAGCCAGCCAGCTAACTCTCCTGGCCGTCAAATTGATGGATGGATGGATGGATGGATGG
ATCGCCGCTAATCCCATGACCCGCAGGAAGGATCTACTCGCCGTGAAAACCTGTACATGTATCATCATTCGATATAGAAA
AAAAAA-GGGGCGACAAAGCAGTAG-ATTTATCATCCGTGTCTTAATGTCTGTTTAAGTTTATGTGTGTGTTATCTTGTG
GAGTGGTTCATTGGTTGGTTAAAACGTAAAATTGACTAGTGG---TCGAATTGAGGAGTAGCAGTGTGTAAAACAGGTCA
GACAAAATTACCTGGCTGGTT----CATTCCTTATTCTATATATACCGTATAATTATAATGGAGTGT--TTGGTGGTGCT
GCACATGCAGCGGTAATTCTTCTTGGACTCCGTCTTAACTCGAACCCGTCTGAGGAGTGA--------------------
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>SNPs
--------------------------S-------------------------S-------S-------------------
------S---------S--S--S---------------------------S-S-------------------------S-
---------S---------S----------------S----S---S----S--S--S--------S--------------
------S------------S--------------------S---------------------------------------
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-----------------------S---------S---SS-SS--------------------------------------
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-----------S----------------------------------------S---------------------------
-------------------------------S------S-----------------------------------------
--S----------------------------------------------------S------------------------
--------S------------------------------------------------------------S----------
--------S-------------------S-----S----------------------------------S----------
---------------------------------S----------------------------------------------
--------------------------------------S--------------------------S--------------
------------------------------------------------S-------------------------------
------------S-S----S-------S---------------------------S--------------------S---
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----------------------S---------------------------------------------------------
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------------------------------------------------------S--------SS---------------
---------------------------------------------S---------------S-S----------------
-----------------------------------------------------SS-------------------------
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-------------------------------------------------S-------------------------S----
---S---------S--------S--S-----------------------------S-------S----------------
---------S------------------------------S---------------------------------------
---------------------SSSS--------S-----------------------S--SS-S------S-S-------
--------------------------------S-S---------S---------------------S-SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS--------------------------------------S--------------------------------
------------------------------------------------------------------S-------------
-S---------------------S-----S--S-S----------S---------------------------------S
---------------S---S-----S--S-----------------------------S-----S---------------
--------S-----------------------------------------S-----------------------------
----------------------------------------------------S---------------------------
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>forward_752
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------------GCTCCAGTGGAAGGATGGTT------------------------------------------------
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>reverse_2302
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-------------------------------------------------------------AAATGTATTGGCTGGCGCT
G-------------------------------------------------------------------------------
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