>input_sequence_77235
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---------------------------------------------------------ATGCAAAGGCATAGCAAACTATG
TGTCTCCACATCCAACCCTATGTTCGGACTCCAAGATTGGGCAAACCTTCCGAAGGATCTGCTACAATCAATTTTCTCTC
ACTTAGGCTCAATCTGTGACCTTCTCGCCTTTGTTGCAACCTGCCGTTCTTGGCGGGTTGCATTAACTTCATACTCATCC
AAATCCACCTTATGCACTTTATTCCCGCCTCTCCTCATCCAACCCAATATTCGTGTCCATGTTCGTCGTCCTCCATGTAA
CAATGGTCATCGCAACTTACAGGCATATAAAGTTATCGATCCAGCCAAGCAAAGTGCCACCGGCCTTCACTGTCATATTG
ATGAAGAAATTTTGCAGACGATGCGTTGTGCTGGCCCTTCATATGGTCAACTCATCTTCTACAACCGTGGACATTGCGTT
GTTGTTGATCCTTTTAGAGGTACCAAGG----------------CCCATTACGTGATGACTATAGAAAGCTCAACTGGTC
TGATATTCCATTCAAACAAAAAATCATGGAGCTTCAATAACTAG------------------------------------
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>chr7A_1_TraesCS7A01G202500
GTGCCGACTCCCAGGCCTTCCCTACAGCCACAAAACTGCTACTCTCCCTCCCCCCACTGTGCGCCTCTTGCTCCTCCATC
GCAGTGCACCACTCTCCTCCTTCGTCGATTCCAAGATCTGGTATTTGATTCTTAAAATAAAGATATTATTTTGTTTTT-A
CCATTTCTTCCATATATATATATATATATATATATATATATAGGACAAATGTTTCCTACAAGCAGTGGTAGTTACCACCA
CTTGTGTTTTGTATGTTGTATGTAGTATCTGTCGAAACCGAGAGTATGTACGTGTAGTATGTAGTATATAACAATGATTA
GGTAGTATATGTACAAATTTTTAGGTAGTATGTACCATTTTTTGAGTATGCTCTTTTTTATGTACAAATATGTACGTATT
TCACAAATATAACAAAAACTATGGGCTCATATGCAATTTTTTCATGTAACTTGCTTTGAAATATCTTAGATATATTATAT
GAACATATTTAAAATAATAAAATAATATATATAGTACCACATGGTAGTATATGAGATATGTGGGGTAACTACCACCGGGT
GGTAGGATGGATTTTCCCTATATACTCATTGTCAAAGATAACATTGCATTCATAGCGTATGTCTAGTTTCCTAGTACATA
TGTTGCAGTCTTTTTTGCCATTTATTACTCCAAAATTGAAGGAGTGGAAATCTAGAGTAGAT---------------TTA
TCCACTAGGTTCTGTGGGGCACAAGCGTTTGACAAAAAAAGCATAGTGTGGCTAGGATAACATCACATAATATATTTTTA
TTTGGTAATATTTCAGACACAATAATCTGCAAATAGAAAGAAGTGTCAAGCATCAGAATATATAACAAGTTTCCTGATAT
ATAGTTACAGTCACCAACATATGCGTATACATTGTTATAGCATTCTAGTTGCTTATTTTATTGC-CACTTCTGAAGTGAC
TCATTCTTTCAATTTCTTTGACTTGAATTTATTATGGTTTGCAGGGAGGTCGCCATCATGCAAAGGCATAGCAAACTATG
TGTCTCCACATCCAACCCTATGTTCGGACTCCAAGATTGGGCAAACCTTCCGAAGGATCTGCTACAATCAATTTTCTCTC
ACTTAGGCTCAATCTGTGACCTTCTCGCCTTTGTTGCAACCTGCCGTTCTTGGCGGGTTGCATTAACTTCATACTCATCC
AAATCCACCTTATGCACTTTATTCCCGCCTCTCCTCATCCAACCCAATATTCGTGTCCATGTTCGTCGTCCTCCATGTAA
CAATGGTCATCGCAACTTACAGGCATATAAAGTTATCGATCCAGCCAAGCAAAGTGCCACCGGCCTTCACTGTCATATTG
ATGAAGAAATTTTGCAGACGATGCGTTGTGCTGGCCCTTCATATGGTCAACTCATCTTCTACAACCGTGGACATTGCGTT
GTTGTTGATCCTTTTAGAGGTACCAAGG----------------CCCATTACGTGATGACTATAGAAAGCTCAACTGGTC
TGATATTCCATTCAAACAAAAAATCATGGAGCTTCAATAACTAGTTACAGAGTCTTACTGCAGCGCCATTCTAACAGCTC
CCCTTGCATCAGCAAACTCGCATATGCTTGTTAGCACTAGCCTCTCCTTATTTAGTTGGCCGGTTGGAAGTGATACTTGG
TCCGAACTCCAGTGTTCTGGTGTACAAATAATTCAGATTGTGGAATTCAAGGACCAATTCATTGCCATGGATCTTCGTCA
ACAGGTATACACTTTGGAGATGGCCCCCAAGCTTAGACTGCAGGAAATATCCACTAACCGCCCCCCTGACTTGACCAAGA
GTTGCCAAGACCCATCTAAAATATCATGGCTAGTGGTCTGCGGTGACATGCTTCTGATGTTGGTCCATTCTTGCACGAGT
ATTCAGTACAATGCCAGTGTGCCATTTATCCGCACGGTCCATTACCTTGACATGTCAACCAAGCCTGCAAAATGGGTGGA
TATGGAAAAGCTGGACAATTGGGCCATCTTCACGGGGAGTGATATCAGGAGTACGTCATTTTCTTGCATGAACCCAGAAC
ATTGGGGAGGAAGGAGCAAATGTCTATATGTTGCTCGTTCCCCTAAACCTTGGAGTGAATATGGGTTAAGCAACGAGCCA
GATCCATCTGTTGATCCCGTCCATCAGCACTTCAGGA------------TGATGCAACCCCTTTGGGTGTACCCGAGCAT
GCTCTATTCGAATGGCCCTTGATCATCACGTGTA------------------------------------TTATTGGGAA
ATTTCCTCTTCTCCAACTCGGGTATGAGTTTGGAGATGTTCATGGTGACATTGGCACTCGGAATTCAACCTTTGCATTAT
ATTTTGGTCCCCCAGTTTCTAATACTTTGTAAGAGATGTTTATGGTGCTTGTATTACTGCTTAAGCTGAACCTCCTAACC
TTCTATAGTT--------TTTTTTGTGATGTTTAATGTTGCACTGGATAGATGTATGATACTTTTAACTATTTGTTGCTT
CATTTTCTACTGTCGAGCTTTAAGTATCTTTTTTATTTCTGTTACAAGATAATGTTCATA
>chr7D_1
GTGTCAACTTCCAGGCCTCCCCTACAGCCACAAAACCGCCACTCTCCCTCCCCCCACTGTGTGCCTCTCGCTCCTCCATC
GCACTGCACTCCTCTCCTCCTTCGTCGATTTCAAGATCTGGTATTTGATTCTTAAAATAAAGATATTATTTTGTTTTTCA
CAATTTCTTCTATATA----------------------------------------------------------------
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------------------TATATACTCGTTGTCAAAGATAACATTGCATTCATACCACAAGTCTAGTTTCCTAGTAGATA
TGTTGCTGTCTTTTTTGCCATTTATTACTCCAAAATTTAAGAATTGGAACTCTAGAGTAGGGAACTCTAGAGTAGACTTA
TCCAATAGGTTTGGTGGAGCACAAGCCTTCGACAAACAAA-CATAGTGTGGCTAGGATAACATCACATAATATATTCTTA
TTTGGTAATATTTCAGACACAATGATCTGCAAATGGAAAGAAGTGTCAAGCATGAGAATATATAACAAGTTTCTTGATAT
ATAGTTACAGTCACCAACATATGCGTATACATTGTTATAGCATTCAAGTT--TTATTTTATTGCACATATCTTAAGTGAC
TCATTCTTTCAATTTCTTTGACTTGAATTTATTATGGTTTGCAGAGAGGTCGTCATCATGCAAAGGCATAGCAAACTATG
TGTCTCCACATCCACCCCTATGTCCGGACTCCAAGATTGGACAGACCTCCCAAAGGATCTGTTACAATCAATTTTCTCTC
GCTTAGGCTCAATCCATGACCTTCTTGCCTTTGTTGCAACCTGCCGTTCTTGGCGGGTTGCATTAACTTCATACTCATCC
AAATCCACCTTATGCACTTTATTCCCGCCTCTGCTCATCCAGCCCAATATTCGTGTCCATGTTCCTCGTCCTCCATGTAA
CAATGGTCATCGCAACTTACAGGCATATAAAGTTATCGATCCAGCCAAGCAAAGTGCCATTGGCCTTCACTGCCATATTG
ATGAAGAAATTTTGCAGACGATGCGTTGTGCTGGCCCTTCATATGGTCAACTCATCTTCTACAACCATGGACATTGCGTT
GTTGTTGATCCTTTTAGAGGTACCAAGGTTTCACCTCCACGTCTCCCATTACGTGATGAGTATAGGAAGCTCAACTGGTC
TGATATTCCATTCAAACAAAAAATAATGGAGCTCCAACAACTAGTTACAGAGTCTTACTGCAGTGCCATTCTAACAGCTC
CTCTTGCATCACCAAACTCGCATATGCTTGTTAGCACTGGCCCCTCCTTATTTAGTTGGTCGGTTGGAAGTGATACTTGG
TCTGAACTCCAGTGTTCTGATGTACAAATAATTCAGATTGTGGAATTCAACGGCCAATTCATTGCCATGGATCTTCGTCA
ACAGATATACACTTTGGAGATGGCCCCCAAGCTTAGACTGCAGGAGATAACCACTAACTGCCCCCCTGACTTGACCAAGA
GTTGCCAAGACCCGTCTAGAATATCATGGCTAGTGGTCTGCGGTGACATGCTTCTGATGTTGGTCCATTCTTGCACGAGT
ATTCAGTACAATGCCAGTGTGTCATTTATCCGCACGGTCCATTACCTTGACATGTCAACCAAGCCTGCAAAATGGGTGGA
TATGGAAAAGCTGGACAACTGGGCCATCTTCACGGGGAGTGATATCAGGAGTACATCATTTTCTTGCATGAACCCAGAAC
ATTGGGGAGGAAGGAGCAAATGTCTATATGTTGCTCGTTCCCCTAAACCTTGGAGTGAATATGGGTTAGGAAATGAGCCA
GATCCATCTGTTGATCCCACCCATCAGCACTTCAGGATCTGGTGCCACCTGATGCAACCCCTTTGGGTGTACCCGAGCAT
GCTCTATTCAGATGGCCCTTGATCGTCACGTGTACCTACAACTTGCTGGTCTAACTATATATGCTCAAGCTTATTGGGAA
ATTTCCTCTTCTGCATCTCGGGTATGAGTTTGGAGATGTTCATGGTGACATTAGCACTCGGAATTCAACCTTTGCCTTAT
ATTTTGGTGCCCCGGTTTCTAATACTTTGTAAGAGATGTTTATGGTGGTTGTGTTACTGCTTAAGCTGAACCTCCTAGCC
TTCTATAGTT--------TTTTTTGTGATGTTTAATGTTGCACTGGATAGATGTGTGATACTTTTAACTATTTGTTGCTT
CATTTTCTACTGTCGAGCTTTAAGCGTC-TTTTTATTTCTGTTACAAGATAATGTTCATA
>chr7B_44
CTCGCCTG------------------------------------------CCCCCACTGTGTGCCTCTCGCTCCTCCACC
GCGCTGCGCTCCTCTCCTCCTTCACCGATTCCAAGATCTGGTATCTGATTCTTAAAATAAAGATATTATTTTGTTTTC-A
CCATTTCTTC--TATA----------------------------------------------------------------
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------------------TATATACTCGTTGTCAAAGATGACATCGCATTCATATCGTAAGTCTAGTTTCGTGGTA-ATA
TGTTGCAGTATTTTTTGCCATTTATTACTCCAAAATTTAAGGATTGGAACTCTAGAGTAGAT---------------TTA
TCCAATAGGTTTTGCGGGGCACAAGCGTTCGACAAAAAAA-CATAGTGTGGCTAGGATAACATCACATAATATATTTTTA
TTTGGTAATATTTCAGACACAATGGTCTGCAAATGGAAAGAAGTGTCAAGCATGAGAATATATAACAAGTTTCCTGATAT
ATAGTTACGGTCACCAACATATCCGTATACATTGTAATAGCATTCTAGTTGCTTATTTTATTGT-CATTTCTTAAGTGGC
TCATTCTTTCAATTA-TTTGACTTGAATTTATTATGGTTTGCAGAGGGGTCGCCATCATGCAAAGGCATAGCAAACTATG
TGTCTCCACATCCACCTGCATGTTCGGGCTCCAAGATTGGGCAGACCTCCCGAAGGATCTGTTGCAATCAGTATTCTCTC
GCTTAGGCTCGATCCTTGACCTTCTCGCCTTTGTTGCAACCTGCCGTTCTTGGCGGGTTGCATTAACTTCATACTCATCC
AAATCCACCTTATGCACTTTATTCCCGCCTCTCCTCATCCAACCCAACATTCGTGTCCATGTTCCTCATCCTCCATGTAA
CAATGGTCATCGCCACTTACAGGCATATAAAGTTATCGATCCAGCCAAGCAAAGTGCCACCGGCCTTCACTGCCATATTG
ATGAAGAAATTTTGCAGACGATGCGTTGTGCTGGCCCTTCATATGGTCAACTCATCTTCTACAACCGTGGACATTGCGTT
GTTGTTATTCCTTTTAGAGGTACCAAGGTTTCACCTCCACGTCTCCCATTGTGTGATGACTATAGGAAGCTCAACTGGTC
TGATATTCCATTCAATCAAAAAATCATGGAGCTCCAACAACTAGTTACAGAGTCTTACTGCAGCGCCATTCTAACAGCTC
CCCTTGCATCACCAAACTCGCATATGCTTGTTAGCACCGGCCTCTCCTTATTTAGTTGGCCGGTTGGAAGTGATACTTGG
TCTGAACTCCAGTGTTCTGGTGTACAAATAATTCAGATTGTGGAATTCAACGGCCAATTCATTGCCATGGACCTTCGTCA
ACAGATATACACTTTGGAGGTGGCCCCCAAGCTTAGACTGCAGGAGATAACCACTAACCACCCCCCTGACTTGACCAAGA
GCTCCCAAGACCCGTCTAAAACATCATGGCTAGTGGTCTGCGGTGACATGCTTCTGATGTTGGTCCATTCTTGCACGAGT
ATTCACTACAATGCCAGTGTGCCATTTGTCCGCACGGTCCATTACCTTGACATGTCAACCAAGCCTGCAAAATGGGTGGA
TATGGAAAAGCTGGACAATTGGGCCATCTTCACGGGGAGTGATATCAGGAGTACATCATTTTCTTGCATGAACCCAGAAC
ATTGGGGAGGAAGGAGCAAATGTCTATATGTTGCTCGTTCCCCTAAACCTTGGAGTGAATATGGGTTAGGCAATGAGCCA
GATCCATCTGTTGATCCTGTTCATCAGCACTTCAGGATCTGGTGCCACCTGATGCAACCCCTTTGGGTGTACCCGAGCAT
GCTCTATTCGGATGGCCCTTGATCATCATGTGTACCTACAACTTGTTGGTC------TATAAGCTCAAGCTTATTGGGAA
ATTTCCTCTTCTGCAACTCCGGTATGAGTTTGAAGATGTTCATAGTGACATTAGCACTCGGAATTCAACCTTTGCATTAT
ATTTTGGTCCCCCGGTTTCTAATATTTTGTAAGAGATGTTTATGGTGGTTGTATTACTGCTTAAGCTGAACCTCCTAGCC
TTCTATAGTTAGTGTTTTTTTTTTGTGATGTTTAATGTTGCATTGGATAGATGTGTGATACTTTTAACTATTTGTTGCTT
CATTTTCTACTGCCGAGCTTTAAGCGTC-TTGCTATTGCTGTTACAAGATAATGTTCATA
>SNPs
---S-S---S--------S-----------------S--S---------------------S------S-----------
---S-----SS---------------------------------------------------------------------
----------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS---------S--------------------------S----S----------------S---
-------------------------------------S-----S-----S------------------------------
----S------S-----------------S----------S---------------------------------------
-----------------------S----------S------------------S--------------------------
-------------------------------------------------------------------S----S-------
--------------------------------------------S-----------------------------------
--------------S----------------------------S----S------------S------------------
S-------------SS----------------------------------------------------------------
----------------------------------------------------------------S---------------
------------------------------------------------------------------------S-------
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-----------------------------------------------------------------S--------------
---------------------------------S---S------------------------------------------
-----------S--------------------------S-----------------------------------------
--S-----------------------------------------------S-S---------------------------
----S----------------------------------------S---S------------------------------
-------------S------------------------------------------------------------------
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------------------------------------------------------S-------------------------
--------------------------------------------------------------------S----S------
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----------S---------------------------------------------------------------------
------------S---------------------------------------S---------------------------
-------------S---------------------------------S-----------------------------S--
------------------------------------------------------S-------------------------
------------------------SS--S-------------------------------
>forward_84
----------------------------------------------------------------CTCTTGCTCCTCCATC
GCAG----------------------------------------------------------------------------
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>reverse_1135
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--------------TGTGACCTTCTCGCCTTTGT----------------------------------------------
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>forward_574
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--------------------------------------------------------------------------CCGGGT
GGTAGGATGGATTT------------------------------------------------------------------
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>reverse_2149
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--------------------------------------------------------------------AGCAACGAGCCA
GATCCATC------------------------------------------------------------------------
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