>input_sequence_77217
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---------------------------------------------------------ATGGCGAGGAGCACGCGGTCGGT
GGCGACGGAGCGCGCGTACCACCACTTCGCGCCGGCGTCGACGCGCGGCCTCATGGGGTACCCGGCCACGGCAGGCGGCC
CCGTCACGGCCGACGAGTTCGACGAGTCAGACGTCTGGGGGTCGTTCAACCCGGGAGAGGAGGCCGAACAACCGGCAAGG
TCGGGTGCCGAGCTACCCCGGGTCCGTGCAGTCCCGGTTGCCCGTCCCGGGAGGAAGACGAAGCCGGTGGACAGGGCCGG
CGGGGGCGGCGCCGCGCACGGGTCGCTGCCCGTGGCCATACCGGACTGGTCCAAGATCCTTGGGGGCGAGTACCAGGGGC
ACCAGGCCGGGGACTGGGAGCTGGACGACGCGGACGACGAGGACGTCGAGGGCGCCCCGGTGGTGCCGCCGCACGAGCTG
GCGTCGCGGCGCCGTGCCGCATCGCTGTCGGTGAACGATGGGATGGGGGTCGGCAGGATGCTCAAGGTCCGGGACGCGGT
CTGGAAGAAGACGGGGTTCCAGGCCTGA----------------------------------------------------
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>chr6A_1_TraesCS6A01G222200
TCTACGGCTCTCGTCGCATGCA-----TCCGCTCTAGTCGATCATCAAGCACGCATGCATGCAGGCAGGCAGGCAGGCAG
GGCAAGGCCAAAGTTGCCAACAGATAACGATCCGGCACGTAA--GTGCGTGCGCGGCATCGATTGACGCTCTAATCCGTG
GGGTTTGGGACCCATGCATGGCCTGCCTGGAGCATCAATTATGGCCGACATTCATTACTAACGAGCCTTAAATTTGTCGC
CGAGAAAAGCTGGTGTGCAATCCTCGACGTTCGTCGTGTGATCTAGACACATGTACGTCTATGTGCATCACGCGCCAGCC
AAAAGCAATTCTACGGATATCGCTGCCAAAGCGGATGTTACTAACACGTATGCTTATG----------------------
-----------------------------------------------------------TAAAGATGTCAACCAGGATGA
GATAATCCAACATGTGTGACTAGGCCAACTTCCATATGGAGATGGAACAAACACTTGCTATTAATCGCTCCCTGAGAGCC
AGATCAGAGAACAAATTGCCAAGAAACTCTTCTATAATTAGTTTCCGGGCGCGGCACGGATAAGACTTTCTGATCGTGTA
GGACTGAATTGCTGCGTTTCTTATCCAGAAAGAAAAATCACTAGGCCCACTACGTTAGCAGCTGCCAATAGCAACGCGCC
AGCACCACCCGAAATCCTGTTAACCACACAAAACACCTACGTACGTGGCGGTTTGACACCGCGAAGAGGCTTGGGACCCA
GCTGGCAGTGGCACGGCGTAGATATCATCCACGTAGCAATCCAAAACGTCAAGGATGAAACGGTCATTCCATAAAACGGC
CTTATCCACTTGCCCCGCTTTCTGCTCTCGTCCTTCCAGCTCATATAAATCCCAGCGCAACCACCAGCGCACGCCTTCCT
TCCTACCTTCTACCCGCCGCGGTTCCGCAGGTCTTCAACTTCCTCGCCTCCTTGCGCGATCTGCTTCACGTTTCCCCTCA
CCGCTCCATTCGCGCTGCACGTTTGCACGGCGAGCAGGCAT---------GGCCGCAATGGCGAGGAGCACGCGGTCGGT
GGCGACGGAGCGCGCGTACCACCACTTCGCGCCGGCGTCGACGCGCGGCCTCATGGGGTACCCGGCCACGGCAGGCGGCC
CCGTCACGGCCGACGAGTTCGACGAGTCAGACGTCTGGGGGTCGTTCAACCCGGGAGAGGAGGCCGAACAACCGGCAAGG
TCGGGTGCCGAGCTACCCCGGGTCCGTGCAGTCCCGGTTGCCCGTCCCGGGAGGAAGACGAAGCCGGTGGACAGGGCCGG
CGGGGGCGGCGCCGCGCACGGGTCGCTGCCCGTGGCCATACCGGACTGGTCCAAGATCCTTGGGGGCGAGTACCAGGGGC
ACCAGGCCGGGGACTGGGAGCTGGACGACGCGGACGACGAGGACGTCGAGGGCGCCCCGGTGGTGCCGCCGCACGAGCTG
GCGTCGCGGCGCCGTGCCGCATCGCTGTCGGTGAACGATGGGATGGGGGTCGGCAGGATGCTCAAGGTCCGGGACGCGGT
CTGGAAGAAGACGGGGTTCCAGGCCTGACGCGCTCTCGGGCCGGCGTCGTCGCCCGCCACTACTAGCTGTTTTCTTTTGA
CAGATCGAATCGGATAAAGCTAGCTGCTACTCCCACAAGTTGGGCCATCTATTTTAGAATGGAGGGAGTAGCTCGTAGAA
GTTGTGGTTATTTTGACAGAGCTTTGGCCTCCGGGGTAGAGAGAGGAGTGGATGCTGAGGAGTGATCATTGTTCTTCGAT
TGTTCGTTCCTGCTGTGCAGTGTTTTCCGGAGAGAACGCGGAACGTTTTCTGATCCTGCGCAA--TTTTTTTGTGTAGCA
CCACGCAAGGGATAGAGCAGCTACTCCTACTGCTAATTGTGCTTACTGCAGAAAAATGATTTGTCGAGGGGATGATCAG-
-------TGGGCGACTTTTTCTTGGAGAGTTTTGTCCTTATCTGCGCATCAGCACGGCCATCATCGGTGATTGCCAAATT
TCACCAACCGCACAGTAAGCGAATATGCCAAAAGCTACGTTGCGCCAACTGATTGGACAAAACAACTGGCGGTTGTTACA
CTATCAGCAAG-----AAATACGCTGGCCAAAAAGTCACGCCAATGATG--CTCTCGTATCAGCGAAATTTCTGGCCGGC
TTACTGAACGTGTACGTTATTGCCCTGTACTACAACAGTACAATGGATGGATTGTCGTTCCCAATTCACTCACCAGTGGA
CCGTGTATATCTGTCGGGGCCACGTACAAAACTGCC---AAACCAAAAACTAAAGTAACAGTCCTAAGGTCAGGTCAAGT
T-TTTCAGCTATAGGATTAATCAAACAGCTCCCGTGCCTTCTTCTACCTTCCATCATCTCCTCGTGGCGGTTATTTCTGT
CGCACGATGTAATGTGCCCGTGTAATTATGTTCCACCCTAAAAAATATATATATAAGTTTGTTCCACGTTATGCCCTGAC
TCCTTTGCATATCTTTCCCTAATAATAATAAAGCAGATATTGCTTCTGGTCATACGTCATTCAAATTACCCTTGAAGTTA
GCGAAAATT
>chr6D_1
TCTACGGCTCTCGTCGCATGCG-----TCCGCTCTAGTCGATCAT----CATGCATGCATGCATGCATGCAGGCAGGCAG
GGCAGGGCCAAAGTTGCCAACAGATAACGATCCGGCACGTACGTGTGCGTGCGCGGCATCGATTGATATATGGAGTC---
-----TGGGACCCATGCATGGCCTGCCTGGAGCATCAATTGTGGCTGACATTCATTACTAACGGGCCTTAAATTTGTCGC
GGAGAAAAGCTGGTGTGCAATCCTCGACGTTCGTCGTGTGATCTAGACACATGTACGTCTATGTGCATCTCGCTCCAGCC
AAAAGCAATTCCA-GGATATCGCTGACACAGCGGATGTTACTAACACGTATGCTTCTG----------------------
-----------------------------------------------------------TAAAGATGTCAACCAGGACGA
GATAATCCAACATGTGTGACTAGGCCAACTTCCATATGGAGATTGAACAAACACTTGCTATTGATCGCTCCCTGAGAGCC
AGATTAGAGAGCAAGTTGCCAAGAAACTCTTCTA----TAGTTTCCGGGCGCGGCACGGATAAGACTTTCTGATCATGTA
GGACTGAATTGCTGCGTTTCTTATCCAGAAAGAAAA-TCACTAGGCCCACTACGTTAGCAGCTGCCAATAGCAACGCGCC
AGCACCACCCGAAATCCTGTTAACCACACAAAACACCTACGTACGTGGCGGTTTGACACCGCGAAGAGGTTTGGGACCCA
GCTGGCAGTGGCACGGCGGAGATATCATCCACGTAGCATTCCAAAACGTCAAGGGTGAAACGGTCATTCCATAAAACGGC
CTTATCCACTTCCTCCGCTTTCTGCTCTCGGCCTTCCGGCTCATATAAATCCCAGCGCAACCACCAGCGCACGCCTTCCT
TCCTACCTTCTACCCGCCGCGGCTCCGCAGGTCTTCAACTTCCTCGCCTCCTTGCGCGATCTGCTTCACGTTTCCCCTCA
CCGCCCCATTCGCGCTGCACGTTTGCACGGCGAGCAGGCACGGACGGCACGGCCGCAATGGCGAGGAGCACGCGGTCGGT
GGCGACAGAGCGCGCCTACCACCACTTCGCGCCGGCGTCGACGCGCGGCCTCACGGGGTACCCGGCCACGGCAGGCGGCC
CCGTCACGGCGGACGAGTTCGACGAGTCAGACGTCTGGGGTTCGTTCAACCCGGCAGAGGAGGCCGAACAACCGGCAAGG
TCGGGCGCCGAGCTACCCCGGGTCCGCGCAGTCCCGGCTGCCCGTCCCGGGAGGAAGACCAAGCCGATG---------GG
CGGGGGCGGCGCCGCGCACGGGTCGCTGCCCGTGGCCATACCGGACTGGTCCAAGATCCTTGGGGATGAGTACCAGGGGC
ACCAGGCCGGGGACTGGGAGCTGGACGACGCGGACGACGAGGACGTCGAGGGCGCCCCGGTGGTGCCACCGCACGAGCTG
GCGTGGCGGCGCCGGGCCGCATCGCTGTCGGTGAACGACGGGATGGGGGTCGGCAGGATGCTCAAGGTCCGGGACGCGGT
CTGGAAGAAGACAGGGTTCCAGGCCTGA--CGCGCTCGGGCCGGCGTCGTCGCCCGCCACTACTAGCTGTTTTCTTTTGA
CAGATCGATTCGGATAAAGCTAGCTACTAGCGTTTCTACAAGT-------------------------------------
----TGGTTGTTTTGACAGAGCTTTGGCCTCCGGCGTAGAGAGAGGAGTGAAAACTGATGAGTGATCATTGTTCTTCGAT
TGTTCGTCCCTGCTGTGCAGTGTTTTCCGGAGAGAACGCGGAATGTTTTCTGATCCTGCGCAATTTTTTTTTGTGTAGCA
CCACGCAAGGGATAGAGCAGCTACT------GCTAATTGTGCTTACAGCAGCTAAATGATTTGTCGAGGGGATGATCAG-
-------TGGGCGACTTTTTCTTCGAGAGTGTTGTCCTTATCTGTGCATCAGCACGGCCATCATCGGTGATTGCCAAATT
TCACCAACCACA---TAAGCGAATATGCCAAAAGCTATGTTGCGCCAACTGATTGGACAAAACAACTGGCGGTTGTTACA
CTATCAGCAAG-----AA-TACGCTGGCCAAAAAGTCAAGCCAATGATG--CTCGTAC--CAGCGAAATTTCTGGCCGGC
TTACTGAACGTGTACGTTATTGCCCTGTACTACAACAGTGCAGTGGATGGATTGTCGTTGCCCGTTCACTCACCAGTGGA
CCGTGTATATCTTTCGGGGCCACGTACAAAACTTCC---AAACAAAAAACCAAAGTAA----------------------
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>chr6B_1
TCTACGGCTCTCGGCGCATGCATCCGCTCCGCTCTAGTCGATCAT----CATGCATGCATGCAGGCA------------G
GGCAGGGCCAAAGTTGCCAACAGATAACGATCCGGCACGTAC--GTGCGTGCGCGGCATCGATTGACGCTCTGATTCGTG
GGCTTTGGGACCCATGCATGGCCTGCCTGGAGCATCAATTATGGCCGACATTCATTACTAACGAGCCTTAAATTTGTCGC
GGAGAAAAGCTGGTGTGCAATCCTCGACGTTCGTCGTGTGATCTAGACACATGTACGTCTATGTGCATCTCGCGCCAGCC
AAAAGCAATTTCA-GGATATCGCTGACACAGCGGATGTTACTAACACGTACTCCCTCCGTAAAGAAATATAAAAGCATTT
AGATCACTAAAATAGTATTCTAAATGCTTTTATATTTGTTTACAGAGGGAGTACTCCTCTAAAGATGTCAACCAGGATGA
GATAATCCAACATGTGTGACTAGACCAACTTCCATATGGAGATTGGACAAACACTTCCTATTAATAGCTCCTTCAGAGCC
AGATTAGAGAACAAATTGCCAAGAAACACTTCTA----TAGTTTCCGGGCGCGGCACGGATAAGACTTTCTGATCATGTA
GGACTGAATTGCTGCTTTTCTTATCCAGAAAGAAAA-TCACTAGGTCCACTACGTTAACAGCTGCCAATAGCAACGCGCC
AGCACCCCCCGAAATCCTGTTAACCACACAAAACACCTACGTACGTGGCGGTTTGACACCGCGAAGAGGTTTGGGACCCA
GCTGGCAGTGGCACGGCGGAGATATCATCCACGTAGCAATCCAAAACGTCAAGGGTGAAACGGTCATTCCATAAGACGGC
CTTATCCACCTCCTCCACTTTCTGCTCTCGTCCTTCCGGCTCGTATAAATCCCAGCCTAACCACCAGCGCACGCCTTCCT
TCCTACCTTCTACCCGCCGCGGTTCCGCAGGTCTTCAACTTCCTCGCCTCCTTGCGCAATCTGCTTCACGTTTCCCCTCA
CCGCTCCATTCGCGCTGCACGTTTGCACGGCGAGCAGGCAAGTACGGCACGGCTGCAATGGCGAGGAGCACGCGGTCGGT
GGCGACAGAGCGCGCCTACCACCACTTCGCGCCGGCGTCGACGCGTGGCCTCACGGGGTACCCGGCCACGGCAGGCGGCC
CCGTCACGGCCGACGAGTTCGACGAGTCAGACGTCTGGGGGTCGTTCAACCCGGCAGAGGAGGCCGAACAACCGGCAAGG
TCGGGTGCCGAGCTTCCCCGGGCCCGTGCAGTCCCGGCTGCCCGTCCTGTGAGGAAGACGAAGCCGGTG---------GG
CGGGGGCGGCACCGCGCACGGGTCGCTACCCGTGGCCATACCGGACTGGGCCAAGATCCTTGGGGATGAGTACCAGGGGC
ACCAGGCCGGGGACTGGGAGCTAGACGACGCGGACGACGAGGACGTCGAGGGCGCCTCGGTGGTGCCGCCGCACGAGCTG
GCGTGGCGGCGCCGGGCCGCATCGCTGTCTGTGAACGACGGGATGGGGGTCGGCAGGATGCTCAAGGTCCGAGACGCGGT
CTGGAAGAAGACAGGGTTCCAGGCCTGAG--GCGCTCGGGCCGGCGTCGTCGCCCGCCACTACTAGCTGTTTTCTTTTGA
CAGATCGATTCGGATAAAGCTAGCTACTAGCGCTTCTAGAAGT-------------------------------------
----TGGTTGTTTTGACAGAGCTTTGGCCTCCGGGGTAGAGAGAGGAGTGGAAACTGATGAGTGATCATAGTTCTTCGAT
TGTTCGTTCCTGCTGTGCAGTGTTTTCCGGAGAGAACGCGGAATTTTTG----------------------TGTGTAGCA
CCACGCAAGGGATAGATCAGCTACT------GCTAATTGTGCTTACAGCAGCAAAATGATTTGTGGAGAAGTTGATCAGT
GGGCGTCTGGGCGACTTTTTCTTCGAGCGTGTTGTCCTTATCTGCGCATCAGCACAGCCATCATCGGTGATTGCCAAATT
TCACCAACCACA---TAAGCGAATATGCCAAAAGCTGTGCTGCACCAACTGATTGGATGAAACAACTGACACTTGTTATA
CTACTATCAGCGAGGAAA-TACGCGGACCAAAAAGTCACGCCAATGATGCTCTCGTAC--CAGCGAAATTTCTGGCCGGC
TTACTGAACGTGTACGTTATTGCCCTGTACCACAACAGTGCAGTGGATGGACTGTCGTTGCCCGTTCACTCAGCAGTGGA
----------CTTTCGGGGCCACGTACAAAACTGCCTCAAAACAAAAAACTAAAGTAACAGTCTTAAGGTCAAGTCATAA
AATTTCAGCAATAGGATTAATCGAACGGCTCCCGTGCCTTCTTCTACCTTCCGTCATCTCCTCGCGGCGGATAATTC---
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>SNPs
---------------------------------------------SSSS--S---------------S------------
----S------------------------------------S------------------------------S--S----
--S-----------------------------------------------------------------------------
S--------------------------------------------------------------------S----------
-----------S-S-----------S--S--------------------------S------------------------
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-------------------------------------------S------------------------------------
----S-----------------------------SSSS-------------------------------------S----
------------------------------------S-------------------------------------------
---------------------------------------------------------------------S----------
------------------S-----------------------------------S-------------------------
-----------S-S-----------------------S------------------------------------------
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----------------------------------------S---------------------------------------
------S--------S-------------------------------------S--------------------------
------------------------------------------------------S-------------------------
-------------------------------------S-------------------------------SSSSSSSSS--
-----------------------------------------------------------------SS-------------
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----S---------S-----------------------S-----------------------------------------
------------S---------------SS---S----------------------------------------------
--------S----------------S---SSS-SS-S--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS-----S------------------------------------------SS----S---------------------
-------------------------------------------S------------------------------------
-------------------------SSSSSS---------------S----S----------------------------
-----------------------S------S-------------------------------------------------
---------S--SSS----------------------S------------------------------------------
------------------S-----------------------------------SSSSSS--------------------
---------------------------------------S--S----------------S--SS----------------
------------S------------------------------S-------------------S--------S----SSS
S--------S------------S---S-------------------------S-----------S-----S--S---SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS
>forward_894
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--------------------------------------------------------------------------AACGGC
CTTATCCACTTGCC------------------------------------------------------------------
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>reverse_2484
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---ACGATGTAATGTGCCCGTGT---------------------------------------------------------
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