>input_sequence_77203
--------------------------------------------------------------------------------
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---------------------------------------ATGGCGAGCGCCAAGCTGGTGCTCGTGGCCGCG------CT
TGTGATCCTGCTGCAGGCGTCGACGAGCGCGGTGGCCCGGCACCACCACCACGCCAAGCCGGACCCGTGCGACGACGCCG
AGGGCGACGGCCCCGAGACGGGCATGC------GGCACAAGCACAAGAAACCCCACTGCCCGTCGAAGCCG---------
------------GGCGGC------CACGGCGGCGGCGGCGGGGGCACCCCGGGCATTATGACGGTGAACGGCTTCGAGAA
GGGCCAGGAGGGCGGCGGGCCGGCGGCGTGCGACGGCAAGTACCACAGCGACAAGGACATGATCGCGGCGCTGTCGACGC
GGTGGTACGACGGCGGGCGCCGGTGCCACAAGACGATCCGCATCACCAGCAAGCGCAACGGGCGCACCGTGGAGGCCCGG
GTGGTGGACGAGTGCGACTCCAACCACGGCTGCAAGGACGACGTCGTCGACACCTCCGCCGCCGTGTGGGAGGCGCTCGG
GCTCGACACCGACGTCGGCGTCGTGCCCGTCACCTGGTCCGACGCCTGA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>chr5A_1_TraesCS5A01G282500
AGGATTTTTTTTTAGTCCTCGTAAGTGCGGTGCTCGGACGGATGCAACACTTG---TTTGAGTTTGTCTTCTGGTCTCCA
ATCCTC-TTGAGTTCGTCCAATTGGACATAGTCGACTCGACGGAGCTCCGGCATAGATTCCTGCCATCTCCTTGGGACGG
TAAGGTTAAGGTTTCTCGTCGTGTGGCGATATTTGCTGCCAGGTGCTTCAGATGTATTCAAGGGTTCAATGACGACGAGT
GTGGCTCTAGGGCGCTGGCCTTTAGGGGCACGTGCACGAAGACTTCCCGGGATTCGCGATATAATTTAGCCGGCTCCGAT
AGGGGAACGGCGACAACGGCGCGGCGGCGGCTCGTTCTGGCAGCAGTGGTGGTCGTTTTGGTGTCTTGGAGTCTCGATAT
AATTTATTATTACGTTTGACGTGCTTTGCACATTCGATAAACTTTGATAATAGACCTGAGTTACTTTTGCC--AAAAAAA
AGAGATTGGTCGACCTATACACCCATTGCCTTGTCGGTTTTTACTCCAAAATTTCAACGGTAATGATGCCCAAACCCATT
CATATGGAAGCACTTGCCGATCAATCAGCTTTGTGTACTAGTAAAAATTGATACACCATCTCTGTGCGAAGAGCGACATG
CCCCGTTCTGCCCTCGGATATTAACGCTGGAGCAATGGCGACACCATGTAATCCAAACCAACTCATCTCGAGGTACACTC
GGGGCCACTTTAATCAGGCCCTGTCTCGAGCATGCCGACAGAGTATCTTACTCGTCAAATTCCCTCGTACTACACTCATC
TGAAAAGGACATTGATCCGGAAGCTCTTACGCCAGAGGTCGGTCAGG-------AGCCACAGAAATGACGCCATGCATGC
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ATGTGCACACATACGCGGGCGCCTATATAA
ACTCGTCA---CCAGTAGCTCAGTACCCACGG-------CCACGGCAAGGCAAGTGCAAAGCTAGGCTAGCAAATAAT-T
A-------AGCAGGCAGGAGGAGCTTCGCTGCTTCAGCAATGGCGAGCGCCAAGCTGGTGCTCGTGGCCGCG------CT
TGTGATCCTGCTGCAGGCGTCGACGAGCGCGGTGGCCCGGCACCACCACCACGCCAAGCCGGACCCGTGCGACGACGCCG
AGGGCGACGGCCCCGAGACGGGCATGC------GGCACAAGCACAAGAAACCCCACTGCCCGTCGAAGCCG---------
------------GGCGGC------CACGGCGGCGGCGGCGGGGGCACCCCGGGCATTATGACGGTGAACGGCTTCGAGAA
GGGCCAGGAGGGCGGCGGGCCGGCGGCGTGCGACGGCAAGTACCACAGCGACAAGGACATGATCGCGGCGCTGTCGACGC
GGTGGTACGACGGCGGGCGCCGGTGCCACAAGACGATCCGCATCACCAGCAAGCGCAACGGGCGCACCGTGGAGGCCCGG
GTGGTGGACGAGTGCGACTCCAACCACGGCTGCAAGGACGACGTCGTCGACACCTCCGCCGCCGTGTGGGAGGCGCTCGG
GCTCGACACCGACGTCGGCGTCGTGCCCGTCACCTGGTCCGACGCCTGAAA---ACCGTATTCACCGGCCGTCGGACTCA
GACGGCCGGCGGACGACGAC--TGGAGGGTATTCTAGATTGCTCGCCAGGAGTCACCTGTAG----TTGTTTCTGTGTGC
GTATGCACGTTTGAAGTGTTGGTGTCGTTGCTAATCTCTCGAGCGTTAGATACTTAATAGTATGTCGAATACGTATAGCA
GAATAAATTGGGGAATAAATTTACCTGTATGGATGGTAGTGTGGGTTTATCATGTACTCCACCCGTCTCAAAATTCTGTT
TTAAATTTGTCTAAATACGGATGTATCATGGAGGAAGTATTCGTCTCCGTTCCAAAATTAATCAAAGTTTTAGATTTATC
CTA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AATCAAACTTTCTTAATACAAAAATTAAGT
TAACATCTAGAATACCAATTAGTCATTTTTTTTTGC---ATAATTGATAAAATGCCTCATGTTTGCTCCACCCCGACAAA
ATTGCCCCACCTTTATTCTCTGTGGATAAAATACCTACATTTCTCTTGCCAATTGGTAAATTACCTCACATTAGAATAAC
----AATCACTAGTG-AAAGGGTTCTAGGGTTGAAAGGCTTGCACACTTTCAACATGGCGATGTTAGCTCGTAATAGCA-
-ACGACGACGCTTCACAACAGATGGTGGTGCTGCAATCGCACAAGCTCACAACGATGGTTGTCCTCACACGCTGCATGCA
AG-AAATTTGAGCGGGGTGGCAAGGATGTGAGATGCTGCCTGGTGCTATAGGACAAAGGGAGGGAGGAGAAAACAAGATC
ACACGACCTCTGTTGATTTTTTTTTTGGAAGGGACCCGTAGAGGTTT---------TTTGTTTTTGTTTTTTAGGCTACA
TCTTAT-GGTATATTTTTGTATTTATTTATTTAGGCTATTCGTTAGGTTTTTTTTAGAGAGAAAGAAAGAACTTATGGTT
TTCTATTTTGAGGGGAACTTGTTTTTTTTTACTGGTAAAATTAGTTCTTTTTAAAAGGTTTATTTAGGCTATACTCGTTA
GGGTTT
>chr5B_1
AGGATTTTTTT-TAGTCCTCGTAAGTGCGGTGCTCGGACGGATGCAACACTTCTCCTTTGAGTTTGCCTTCTGGTCTCCG
ATCCTCCTTGAGTTCATCCAATTGGACGTAGTCGACTCGGCGGAGCTCCGGCATAGATTTCTGCCATCTCCTTGGGACGG
TAAGGTTAGGGTTCCTCGTCGTGTGGCGATATTTGCTGACAGGTGCTTCAGATGTATTCAATGGTTCAATGACGATGAGT
TCGGCTCCAGGGCGCTGGTCTTTAGGGGCACGTGCACGAAGACTTTTCGGTTGTCATCTCA------AGCCGGCTCCGAT
AAGGGAACGACGACAGCGGCGCGTCAGCGGCTCGTTCTGGCAGCGCTAGTGGTCGTTTGATTGTCTTGGAGTCTCGATAT
AATTTATTATTATGTTTGACGTGCTTTGTACTTTCGGTGAACTTTGATAATAGACCTGAATTATTTTTGCAAAAAAAAAA
AGAGATTGGTCGACCTATACACCCATTGCCTTGTCCGTTTTTACTCCAAAATTTCAACGGCAATGATGCCCAAACCCATT
CATATCGAAGCACTTGCCGATCAACCAGCTTTGTGT---AGTAAAAATTGA--------------GCGAAGAGCGACATG
CCCCGTTCTGCCCTCGGATATTAACGCTGGAGCAATGGCGACACCATGTAATCCAAATCAACTCATCCCGAGGTAGACTC
AGGGTCATTTTAATCAGGCCCTGTCTCGAGCATGCCGACAGAGTATCTTACTCGTCAAATTCCCTCGT---ACACTCATC
TGAAAAGGACATTGATCCGGAAGCTCTTACGCCAGAGGTCGGTCAGG-------AGCCACAGAAAAGACGTCATGCATGT
ATATGTGCACGGACGAGACTTGCTTGCTCCCCTCCCGTGTGCCCATCCGTACTCCCGCATACGTGGCTTGATTTGGTTGA
AATAAAATAAGGTCCGGTCCCACCCCTTAAAATCAGGGGGGAAATGATTAGATTAGAAAAAAAAGACAGCCGTTAGATGA
GGTGGGAGCATGAATGGAAGCACGGAAAGGAAGCAGGCAAGCCGGATCCTATGTGCACACATACGCGGGCCCCTATATAA
ACTCGTCAGCATCAGTAGTCCAGTACCCACGGCCACGGCCCACGGCAAGGCAAGTGCAAAGCTAGGCTAGCAAATAAT-T
A-------AGCAGGCAGGAGGAGCTTCACTGCTTCAGCAATGGCGAGCGCCAAGCTGGTGCTCGTGGCCGCA------CT
TGTGATCCTGCTGCAGGCGTCGACGTGCGCGGTAGGCCGGCACCACCACCACGCCAAGCCGGACCCGTGCGT---CGGCG
AGGACGACGGCCCCGAGCCGGGCATGC------GGCACAGGCACAGGAAGCCCCACTGCCCGTCGACCCCA---------
------------GGCGGC------CA---CGGCGGCGGCGGCGGCACCCCGGGCATTATGACGGTGAACGGCTTCGAGAA
GGGCCAGGAGGGCGGCGGGCCGGCGGCGTGCGACGGCAAGTACCACAGCGACAAGGACATGATCGCGGCGCTGTCGACGC
GGTGGTACGACGGCGGGCGCAGGTGCCACAAGACGATCCGCATCACCAGCAAGCGCGACGGGCGCACCGTGGAGGCCCGG
GTGGTGGACGAGTGCGACTCCAACCACGGCTGCAAGGACGACGTCGTCGACACCTCGGCCGCCGTGTGGGAGGCGCTCGG
GCTCGACACCGACGTCGGCGTCGTGCCCGTCACCTGGTCCGACGCCTGATCGACACCGTATTCACCGGCCGTCGGACTCG
GACGGCCGGCCGACGGCAACCATGGTGGGTATTCTAGATTGCTCGCCAGGAGTCACCTATAGTTGTTTGTTTCTGGGTGC
GTACGTACGTTTGAAGTGTTGATGTCGTTGCTAATCTCTCGAGCGCTAGGTACTTAATA---TGCCGAGTACGTAGCA--
------------GAATAAATTTACCTGTATGGATGGTAGTGCGGGTTTATCAT---------------------------
------------------------------------GTATTCGTCTCCGTTCCAAAAT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>chr5D_200
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TGCTTCAGATGTATTCAAGGGCTCAACGACGACGAGT
GCGGCTCCAGGGCGCTGGTCTTTAGGGGCACGTGCACGAAAACTTCCCGGTTGTCATCTCA------AGCCGGGTCCAAT
AGGGGAACGGCGACAGCGGCGCGTCGACGGCTCGTTCTGGCAGCGATAATGGTCGTTTGGTTGTCTTGAAGTCTCGATAT
AATTTATTATTATGTTTGACGTGCTTTATACTTTCGGAGAACTCTGATAATAGACCTGAATTATTATTGCAAAAAAAAAA
AGAGATTGGTCGATCTATACACCCATTGCCTTGTCGGTTTTTACTCCAAAATTTCAACGGTAATGATGCCCAAACCCATT
CATATCGAAGCACTTTCCGATCAATCAGCTTTGTGT---AGTAAAAATTGATA--CCATCTCTGTGCGAAGAGCGACATG
CCCCGTTCTGCCCTCAGATATTAACGCTGGAGCAATGGCGACACCATGTAATCCAAACTAACTCATCTCGAGGTACACTC
AGGGCCATTTTAATCACGCCCTGTCTCGAGCATGCCGACAGAGTATCTTACTCGGCGAATGCCCACGT---ACGCTCATC
TGAAAAAGACATTGATCCGGAAGCTCTTACGCCAGAGGTCGGTCAGGACTCAGGAGCCACACAAATGCCGCCATGCATGC
ACATGTGT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ACACATACGCGGGCGCCTATATAA
ACTCGTCAGCACCACTAGTTCAGTACCCACGGCAAGCCAAGTTGAAGCTAC------------AGGCTAGCAGGTAAT-C
A-------AGAAGGCAGGGA----------GCTTCAGCAATGGCGAGCGCCAAGCTGGTGGTCGTGGCCGCG------CT
TGTGATCCTGCTGCAAGCGTCGACGAGCGCGGTGGCCCGGCACCACCACCACGCCAAGCCGGACCCGTGCGACGACGCCG
AGGACGACGGCCCCGAGCCGGGCATGC------AGCACAAGCACAAGAAGCCCCACTGCCCGTCGACCCCG---------
------------GGCGGC------CA---CGGCGGC---------ACCCCGGGCATTATGACGGTGAACGGCTTCGAGAA
GGGCCAGGAGGGCGGCGGGCCGGCGGCGTGCGACGGCAAGTACCACAGCAACAAGGACATGATCGCGGCGCTGTCGACGC
GGTGGTACGCCGGCGGGCGGCGGTGCCACAAGACGATCCGCATCACCAGCAAGCGCGACGGGCGCACCGTGGAGGCCCGC
GTGGTGGACGAGTGCGACTCCAACTACGGCTGCAAGGACGACGTCGTCGACACCTCCGCCGCCGTGTGGGAGGCGCTCGG
GCTCGACACCGACGTCGGCGTCGTGCCTGTCACCTGGTCCGACGCCTGAAA---ACCGTGTTCACCGGCCGTCGGACTCG
GCCGGCCGGCCGACGACGACCATGGAGGGGATTCTAGATTGC------------------------TTGTTTCTGTGTGC
GTGTGCTAAAATAAT------------------ATCTCTCGAGCGCTAGGTACTTAATA---TGTCGAGTACGTAGCA--
------------GAATAAATTTACCTGTATGGATGGTAGTGCGGGTTTATCAT---------------------------
------------------------------------GTATTCGTCTCCGTTCCAAAAT-AATTAAAGTCTTAGATTTATC
CTATATCAAACTTAGGGGTGGGCACTTTTGAACTGAAAACCGAAAAACCGAACAGAACTGAACCATATTAACCGATTTAT
CTATTAATTCGGTGGTTCGATTTTTTGTTCAGTGGGAAATTTTATGGTTGTTCGATGTTTGGTTTTTGTTCGGTTTTCAG
TGCCCAAAAGCCGAATACATCAAAAAAACCGATATGTACGATACCCCAAGCAATACCTTGTTTTCGAAAGTGCAGCGGGG
GCGCGTCCTCTGGCAAATACTTTGGTTGTGGCAGACGTCCGGCCAGCCGCTAGATGAGTTTCTAATCTCACAATCTAACT
AGTACTCCTACCGTAACGCCATACTAACATGGCTAATTGAATCTGTTTAGATTATTTTACTATTGTTTGCATGCAACATA
GTCGATGGCCGTATTCTTCTAGTAAGTACTCCCTTCGTTCCATAATGTAAGACGTTAATATAAAAAAAGTCTTACATTAT
GGGACGGAGGGAGTACTTATTAAGATTTCTATCCATGCAATATCTCGTAGGAGTATGTATGCATGCCCGGCGCTTGGTTA
TGGAAGTAACTAGCAATTAGTGTATCAATTAGTGCATGAGTTGCATAGTTTACACGCATCACACATATTCTTCCGTACAT
AATACATGTAACGCCCCATGTGATTTTACACTTAATTATGTTTACTAGTTTGCTTGACCGAATAAAGCACTGACTGATGT
CGAGGTTGCTAGCTCTTGTGATATATACTAATGAGTGCATGTATTTTGGTTTTCGGTTAACCAAATAAACCGAACCGATA
TATTATGATTAATATGGTTCGGTTTCTAAATATTGTGTGATTAATTCGGTTTCCATTTCTTCAAAACCGAAATTATAAAA
CACCGAATAAACCAAACCGTATTAACCATTTAAACCGAATGCCCAGCCCTAATCAAACTTGCTTAATAAAAAAATCATAT
TAACATGTAGAATACCAATTAGTCATATTATTTTACGTAATAATTGATAAAATGGCTCATGTTTGCTCTACCCGGTCAAA
ATTGCGCCACCCTTATTCCCTGTGGATAAAAGACCTACATTTCTCTTGCCAATCGGTAAACTACCTCATATTAGAATAAC
AAGTAATCACTAGTGAAAAGGGTTCTAGGGTTCAGAGGCTTGCACACTTTCAACATGGCGATGTTAGCCCGTATAGCAAC
GACGACGACGCTTCACAACAGATGGTGGTGCTGCAATCGCCCAAGCTCACAATGGTGGTCGTCCTCACACGCTGCATGCA
AGAAAATTTGAGCGGGGAAGCAAGGATGTGCGATGCCGCCTGGTGCTGTAGGACG-AGGGAGGGAGGAGAAGACAAGATC
GCACGACCTCTGTTGA----TTTTTTTAAGGGACCCAGTAGAGGTTTGTTTATTATTTTTGTTTTTGTTTTTAGGCTACC
TCTTAGGGGTATATTTTTGTTTTTATTTATTTAGG-------------TTTTTTTAGAGAGAGAGAAAGAACTTAGGGTT
TTTTATTTTGA-GGGAAACTTAGTGTTTTTACCGGCAAACTCAGTTTTTTTT----------------------------
------
>chr1A_888
GCGCCTA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TATATAA
ACTCCTCGAAGCAGCTTGATCAGAACCAAGTACG------CACGCCAAGTCAAGTGCAAAGCTAGGCTAGCAAATACT-T
G-------AGCAGGCAGGAGG-----------TTTAGCAATGGCGATCGCCAAGCTTGTAGTCGTGGGCATGGCCATCCT
TGTAATCCTGCTGCAGGTGTCGACGTGCGCCGTGGCCCGG------CACCACGCCAAGCCGGACCCGTGCGC---CAGCG
AGGACGACT---CCGTGCCGGGCATGCTGCACAAGCACAAGCACAAGAAGCCCCACTGCCCCTCGCCGGGCGGCACCGGT
GGT------GGCGGCGGC------GG---CGGCGGC---------ACCCCAGGCGTGATGACGGTGAACGGCTTCGAGAA
GGGCCAGGAGGGCGGCCCGCCGTCGGAGTGCGACGGCAAGTTTCACAGCAACAAGGAAATGATCGTGGCGCTGTCGACGA
GGTGGTACGCGGGCGGACGCCGGTGTGGCAAGATGATCAACATCACCAGCAAGAAGAACGGGCGCACCGTGCAGGCCAAG
GTGGTGGACGAGTGCGACTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAGGCCGTGTGGAAGGCGCTCGG
GCTCGACAGCAACATCGGCGAGGTGCCCGTCACATGGTCCGACGCCTGACACCAT--GTATTCCCCGGCC----------
--------------------------------------------------------------------------------
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------
>chr1D_888
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------GCGCCTATATAA
ACTCCTCGAAGCAGCTTGATCAGAACCAAGTACG------CACGCCAAGTCAAGTGCAAAGCTAGGCTAGCAAATGCTAC
TAGTACTTACCAGGCAGGAGG-----------TTTAGCGATGGCAAACGCCAAGCTTGTAGT------CATGGCCATCCT
TGTAATCCTGCTGCAGGTGTCGACGTGCGCCGTGGCCCGG------CACCACGCCAAGCCGGACCCGTGCGC---CAGCG
AGGACGACT---CCGTGCCGGGCATGCTGCACAAGCACAAGCACAAGAAGCCCCACTGCCCCTCGCCGGGCGGCACCGGT
GGC------GGCGGCGGC------CG---CGGCGGC---------ACCCCAGGCGTGATGACGGTGAACGGCTTCGAGAA
GGGCCAGGAGGGCGGCCCGCCGTCGGAGTGCGACGGCAAGTTCCACAGCAACAAGGACATGATCGTGGCGCTGTCGACGA
GGTGGTACGCGGGCGGACGCCGGTGCGGCAAGATGATCAACATCACCAGCAAGCATAACGGGCGCACCGTGCAGGCCAAG
GTGGTGGACGAGTGCGACTCCAACCACGGCTGCAAGACCAATATCGTGGACACCTCCGAAGCCGTGTGGAAGGCGCTCGG
GCTCGACAGCAACATCGGCGAGGTGCCCGTCACATGGTCCGACGCCTGAGACCAT--GTATTCCCCGGCC----------
--------------------------------------------------------------------------------
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------
>chr1B_888
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GCGCCTATATAA
ACTCCTCGAAGCAGCTTGATCAGAACCAAGTACG------CACGCCAAGTCAAGTGCAAAGCTAGGCTAGCAAATACTAC
TAGTACTTAGCAGGCAGGAGG-----------TTTAGCAATGGCAAACGCCAAGCTTGTAGTCGTGGGCATGGCCATCCT
TGTAATCCTGCTGCAGGTGTCGACGTGCGCCGTGGCCAGG------CACCACGCCAAGCCGGACCCGTGCGC---CAGCG
AGGACGACT---CCGTGCCGGGCATGCTGCACAAGCACAAGCACAAGAAGCCCCACTGCACCTCGCCGGGCGGCACCGGT
GGTGGCGGTGGCGGCGGC------GG---CGGCGGC---------ACCGCAGGCGTGATGACGGTGAACGGCTTCGAGAA
GGGCCAGGAGGGCGGCCCGCCGTCGGAGTGCGACGGCAAGTTTCACAGCAACAAGGACATGATCGTGGCGCTGTCGACGA
GGTGGTACGCGGGCGGACGCCGGTGCGGCAAGATGATCAACATCACCAGCAAGCACAACGGGCGCACCGTGCAGGCCAAG
GTGGTGGACGAGTGCGACTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAAGCCGTGTGGAAGGCCCTCGG
GCTCGACAGCAACATCGGCGAGGTGCCCGTCACATGGTCCGACGCCTGAAA---ACA-TATTCGCCGGCC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>chr1B_930
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------CACGGCAAGTTAAGTGCAAAGCTAGGCTAGCAAAATAGAT
A-------AGCAGGCAGGAGG-----------TCTAGCAATGGCAAACGCCAAGCTTGTAGTCGTGGGGGTGGCCATCCT
TGTAATCCTGCTGCACGTGTCTACGTGCGCCATGGCCCGG------CACCACGCCAAGCCGGACCCGTGCGC---CAGCG
AGGACGACT---CCGTGCCGGGCATGCTGCACAAGCACAAGCACAAGAAGCCCCACTGCCCCTCGCCGGGCGGCAGCGGT
GGT------GGCGGCGGCCGCGGAGG---CGGCGGC---------ACCCCAGGCGTGATGACGGTGAACGGCTTCCAGAA
GGGTCAGGACGGCGGCGGGCCGTCGGAGTGCGACGGCAAGTACCACAGCAACGGTGACATGATCGTGGCGCTGTCGACGC
GCTGGTACGAGGGCGGACGCCGGTGCGGCAAGATGATTCGCATCACCAGCAAGCACAACGGGCGCACCGTGCAGGCCAAG
GTGGTGGACGAGTGCGACTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAGGCCGTGTGGAAGGCGCTCGG
GCTCGACAGCAACATCGGCGAGGTGCCCGTCACATGGTCCGACGCCTGA-------------------------------
--------------------------------------------------------------------------------
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------
>chr1A_935
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CAAGTCAAGTGCAAAGCTAGGCTAGCAAATACT-T
G-------AGCAGGCAGGAGG-----------TTTAGCAATGGCAAACACCAAGCTTGTAGTCGTGGGCGTGGCCATCCT
TGTAATCCTGCTGCAGGTGTCGACGTGCGCGGTGGCCCGG------CACCACGCCAAGCCGGACCCGTGCGC---CAGCG
AGGACGACT---CCGTGCCGGGCATGCT------GCACAAGCACAAGAAGCCCCACTGCACCTCGCCGGGCCGCA-----
-GC------GGCGGCGGC------GG---CGGCGGC---------ACCCCAGGCGTGATGACGGTGAACGGCTTCCAGAA
GGGCCAGGACGGCGGCGGGCCGTCGGAGTGCGACGGCAAGTACCACAGCAACGGCGACATGATCGTGGCGCTGTCGACGC
GCTGGTACGCGGGCGGACGCCGGTGCGGCAAGATGATCCGCATCACCAGCAAGCACAACGGGCGCACCGTGCAGGCCAAG
GTGGTGGACGAGTGCGACTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAGGCCGTGTGGAAGGCGCTCGG
GCTCGACAGCAACATCGGCGAGGTGCCGGTGACATGGTCCGACGCCTGA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>chr1D_992
GCTTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GCCATGGCGAACACGAGGCTCGCGGT------CGTGGCCATGCT
TGTGATCTTACTGCAGCTGTCCACGTTATCCGTGGCCCGG------CACCACGCCAAGCCGGACCCCTGCGT---CGGCG
AGGACGACT---CCGTGCCAGGCATGG------TCCACAAGCACAAGAAACCCCACTGCCCGTCGCCGGGCGGCAGCGGT
GGC------GGCGGCGGC------GG---CGGCGGC---------ACGCCTGGCGTGATGACGGTGAACGGGTTCCAGAA
AGGCGAGGACGGCGGCGCACCGTCGGAGTGCGACGGCAAATACCACAGCGACAAGGACATGATCGTGGCGCTGTCGACGA
GGTGGTACGCGGGCGGACGCCGGTGCGGCAAGATGATCAACATCACCAGCAAGAAGAACGGGCGCACCGTGCAGGCCAAG
GTGGTGGATGAGTGCGACTCCAACCACGGCTGCAAGACCAACATCGTGGACACCACGGAAGCCGTGTGGAAGGCGCTCGG
GCTCGACAGCGACATCGGCGAGGTGCCCGTCACATGGTCCGACGCCTGAGACCAT--GTATTCACC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------
>chr1B_992
GCTTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GCCATGGCGAACACGAGGCTCACGGT------CGTGGCCATGCT
TGTGATCTTACTGCAGCTGTCCACGTTATCCGTGGCCCGG------CACCACGCCAAGCCAGACCCCTGCGT---CGGCG
AGGACGACT---CCGTGCCGGGCATGG------TCCACAAGCACAAGAAACCCCACTGCCCGTCGCCGGGCGGCGGCGGT
GGT------CGCGGCGGC------GG---CGGCGGC---------ACGCCTGGCGTGATGACGGTGAACGGGTTCCAGAA
AGGCGAGGACGGCGGCGCACCGTCGGAGTGCGACGGCAAGTTCCACAGCGACAAGGACATGATCGTGGCGCTGTCGACGA
GGTGGTACGCGGGCGGACGCCGGTGCGGCAAGATGATCAACATCACCAGCAAGAAGAACGGGCGCACCGTGCAGGCCAAG
GTGGTGGATGAGTGCGACTCCAACCACGGCTGCAAGACCAACATCGTGGACACCTCCGAAGCCGTGTGGAAGGCGCTCGG
GCTCGACAGCGACATCGGCGAGGTGCCCGTCACATGGTCCGACGCCTGAGACCAT--GTATTCACC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>SNPs
-----------S----------------------------------------S-------------S------------S
---------------S-----------S-----------S-------------------S--------------------
--------S----S------------------------S-----------------------------------------
-S-----S----------S-------------------------------SSS--SSSSS-SSSSSS-------------
---------------S-------S--------------------SS-S----------S-S-------------------
------------S---------------S--S----S-S--------------------S---S------S---------
--------------------------------------------------------------------------------
-----S------------------------------SSS--------------SS-------------------------
--------------------------------------------------------------------------------
S------S------------------------------------------------------------SSS---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
---S-------------S------------------------------------------------S-------------
--------------------------SSS------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
----------S-----------------------------------------------S---------------------
---------------------S-----------------------S---S---------SSS------S------SSSSS
SSSSSSSSSSSS-----------------------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------S---S-----S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------S------S-SS-
------S-------------------S--S----S-------------------S-------------S----S-S----
-----S-----S------S------------S---------------------S------S-------S-----------
--------------------------------S-S---------------------------------S----SSSSS--
----------------------------------------S-----------S-S----S--------------------
-----------------SS-----------S-----S----------S------SS---------------S--------
S---------------SSSS------SS-S--SS--S----------------------SS----SS------------S
-----S--------------S--------------SSSSSSSSSSSSS--------------S------------S----
--S--------S-----SS-SSS-S-------S--S---S-S----S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_302
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CTTCCCGGGATTCGCGATAT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------
>reverse_3354
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------ATAGCAA
CGACGACGCTTCA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
