>input_sequence_77200
--------------------------------------------------------------------------------
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----------------------------------------------------------------------ATGGCCGCCA
TGAAGATCACCCTCCTTGCCGTGGCCGCAATCTCGGCAGTCTTACTAGGCACCGCGTCGGCGGCGACCTACGGTGTCGGC
GAGCCG---GGCGGTTCGTGGACCCTCAACACCGACTACAGTAACTGGGTGTCCAACAAGAAGTTCCACCCGGGTGACGA
GATCGTCTTCAAGTACTCAACCCCGGCGCACAACGTGGTCGAGGTGAGCAAGGCCGGCTACGACTCCTGCAGCACCGACA
GCGCCATCAACACCTTAACCTCCGGCAACGACGTCGTCGCCATCAACGCCACCGGCACCCGATACTTCATCTGCGGCATC
CCTGGCCACTGCAGCCCCACTGCCGCAGCCAGCATGAAGGTCGTGATCGACGTCGTCCCGAGTTCCTCCTC------ACC
GTCGTCACCCATGCCGGCTGCCGGTCCCGGCGCGAGCAAC------CTGCCGCCACCCTCCTCTACCGCAACCTCTGCCG
GGGCCACAGCAGGATTTGGCCTTGTCGTCCTACTGGCCGCCAGCCTCATGGCTTA--------G----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4D_1_TraesCS4D01G271100
CAAAAAAGTGATTTCACTCGTTACAAAAGATAGATTTCACTCATTTCACTAGTTTCAGAAAAAA-ATTACACCCACAATA
TACACACTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AAATATATGTTTCAATTATTTGAAATAATTTATATCTATGAACTTAGTGAAATTTATTTTTTGG-ACAAA
GTGAAAT-----------------------------GTGAAACTCGTTATTTCTAAATCTAGTTGAAAAATATTCAAGTT
TGAACTTGTTCTGAAGATCATGTTGCAAGGAATTTCAATATATAAAAAA-------------------------------
ATTCAATAACGTATTTTTAATGTCAAAGATAGTGACAATCTAAAATTGTAAGC-AAAAATAAAAAGATGCATTTGTTTGG
AAGGGCAGAGAGAGGAAAGAAGTTGCATGCATGCGTACATTGCACTGGCAAAAGTAGTACCTATAGCTGACA---TACTA
GTGCAAAGTGGTGAAAAGAGATGGACCAGCCATCTGACATCCAAAAGTGCTATACGAGAGATGGGTTATGAGAATACTAG
TGCTATACAAGAGGTGGGCCACGTGAACGTACGAATCGGAAACCAGACGAACGGTGGATGGCTTGCCGGTACCTCCAGGA
TCCGGTAAAGAGA-CTTTGCGAGACCGAGATCCTGGTTGTGGACGAAGGTACGAGCGGCATTCCTTTGCGCGGCTACACG
AGCCAGAAAGTCA-AGGTTGCTCCAGCATGAGCCACAAC---CAACTGTGAAGAGGTCAGCATTCAGCAGGCCACCAACC
CAAGCCCGGCCGCGTATGACCAGGTACCTACTAGT----------------------AGTGCAGTAGTATAATACTAGTG
GTGGCTTTTGTTCAAACGCACATGACTACTTAACCCCAAAATCCAATATCCAAATGTCATTCCACCAACCCATCTCGCTA
GGCGCTTGGTTGTATATAAAGC-GCACGGCAGCATAAAAAATATAACAGCAA-CCCAAC-CCCCGCTAAGCATCAGCAGA
GTCTT-------GCCTTCTACCTCCTCTGCTCTGCATTCCTCCTTCCAGTT------CCAACCGCAATCAATGGCCGCCA
TGAAGATCACCCTCCTTGCCGTGGCCGCAATCTCGGCAGTCTTACTAGGCACCGCGTCGGCGGCGACCTACGGTGTCGGC
GAGCCG---GGCGGTTCGTGGACCCTCAACACCGACTACAGTAACTGGGTGTCCAACAAGAAGTTCCACCCGGGTGACGA
GATCGTCTTCAAGTACTCAACCCCGGCGCACAACGTGGTCGAGGTGAGCAAGGCCGGCTACGACTCCTGCAGCACCGACA
GCGCCATCAACACCTTAACCTCCGGCAACGACGTCGTCGCCATCAACGCCACCGGCACCCGATACTTCATCTGCGGCATC
CCTGGCCACTGCAGCCCCACTGCCGCAGCCAGCATGAAGGTCGTGATCGACGTCGTCCCGAGTTCCTCCTC------ACC
GTCGTCACCCATGCCGGCTGCCGGTCCCGGCGCGAGCAAC------CTGCCGCCACCCTCCTCTACCGCAACCTCTGCCG
GGGCCACAGCAGGATTTGGCCTTGTCGTCCTACTGGCCGCCAGCCTCATGGCTTA--------GAACGCATATTTCAGCC
AGCTGCATCCGGCACGCACATATGAGCTTACATATTG---TTTGATTGGTTATTA-TGGGGAATAT--------ATACAT
GTATTATTGCTTAGAGCGAGGATGTGAGAACTACT--------TTGTATCTCTCACGTTTGTATGTAATCTACTGGCCTT
TAGGCA------TTTCATATT-ATTTTTGAGGTAAAATTAGTAAATGTGCGTCAGTAGATTACATACAAACGTGAGAGAT
ACAAAGTAGTTCTCACATCTTCGCTCTAAGCAATAATACATGTATATATTCCCCAGTAATAACCAACCAATCAATATGTA
AGCTCATATGTGCCTAGCCAGAGCAAAGTTAGCAACGTCGAAAGAAATTTAATAATATCGATTTGTCATGATTTTTTAAC
CATCCCATATTATGTTAGTACCTCCGTCCGGAATAAACTATCGCTGAAATGAGTGTTGAACTGTAGTTGAAATGAGTGTA
TCGTACACTCATTTCAGCGACAGTTAACTCCTCGGAACGGTCGCCCTTTCCCACATGGTGGCTGTCCATCAGTTACGCAC
GCATCCCACATGGCGGCTGCCCTACAGAAACGTGCGCCTCCACCTCCGGCGTGTCGTCTGCGATGCTCTACGTTATCAGC
TCTATCTTCGACGCACATCACAACGCCGCCGCAACCAGGGTAGGCAACGTCCCCGAACGGCCATATGGGCAGCTCATCTC
GTAGCCCATCCCGTGTTTCTTGAACATGTGTTTTCACATCCAGAGGACTCGGGACGAAACCATTCGAGTTGGATCCAGAT
CAAATTCTACGGTACTCAATTTGATAAACAAAACATGTGTCATATACTCCCTCCGTCCGGAATTATTTGCCATATACATC
CATTCGAGCGACAAGTAATTTCAGAAGGAGGTAGTTATGACCTAACACATGTTTTGTTAGTCAAACAAATCGATACCATC
TCAAAACTTCCAAAAAAATTAGAGAAGCAGGAGTCACATGTACAGTAAAAG
>chr4A_1
CAAAAAAGTGATTTCACTCGTTACAAAAGATAGATTCCACTCATTTCACTAGTTTCGGAAAACATTTTACACTCACAATA
TACACACTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AAATATATGTTTCAATTCTTTGAAATAATTTATATCTATGAACTTAGTGAAATTTATTTTTTTG-ACTAA
GTGAAAT-----------------------------GTGAAACTCATTA-TTCTAAATCTAGTTGAAAAATATTCAAGTT
TGAACTTGTTCTGAAGATCATGTTGCAAGGAATTTGAATATATAAAAAAT------------------------------
-TTCAATAACGGATTTCTAATATGAAAGATAGTGACCATCTAAAATTGTAAGC-AAAAATAAAAAGATGCATTTGTTTGG
AAGGGCAGAGAGAGGAAAGAAGTTGCATGCATGCGTACAATGCACTGGCAAAAGTAGTACCTGTAGCTGACA---TACTA
GTGCAAAGTGGTGAAAATAGGTGGACCAGCCATCTGACATCCAACGGTGCTATACGAGAGATGGGTTATGAAAATACTAG
TGTTATACGAGAAGTGAGCCACGTGAACGCACGAATCGCAAACCAGAGTAACGGTGGATGGTTTGTTGGTACCTCCAGGA
ACCGGTAAAAGAGACTTTGCGA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr2A_1
CAGAAAAGTGATTTCACTCGTTACAAAAGATAGGTTTCACTCATTTCACTAGTTTCAGAAAACGTTTTACACTCACAATA
TACACACTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AAATATATGTTTCAATTCTTTGAAATAATTTATATCTATGAACT-AGTGAAATTTATTTTTTTGGACCAA
GTGAAA-----------------------------TGTGAAACTCGTTATTTCTAAATCTAGTTGAAAAATATTCAAATT
TGAACTTGTTCTGAAGATCATGTTGCAAGGAATTTGAATATATAAAAAA-------------------------------
A-TCAATAACAGATTTTTAATGTGAAAGATAGTGACCATCTAAAACTGTAAGC-AAAAATAAAAAGATGCATTTGTTTGG
AAGGGTGGAGAGAGAAAAGAAGTTGCATGCATGCGTACAGTGCACTGGCAAAAGTAGTACCTGTAG--GACA---TACTA
GTGCAAAGTGATGAAAAGAGGTGGACCAGCCATCTGACATCCAACAGTGCTATACGAGAGATGGGTTATGAGAATACTAG
TGCTATACGAGAGGTGGACCACGTGAACGCACGAATCGCAAACCAGACGAACGGTGGATGGTTTGCACGTACATCCAGGA
ACCGGTAAAAGAGACTTTGC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr3B_1
CAAAAAAGTGATTTCACTCGTTACAAAAGATAGATTTCACTCATTTCACTAGTTTCAGAAAACATATTACACTCACAATA
TACACACTGAAATAAGGAGTTTCACAAAAAATAATATTTCAATTTTTTTTTCAAAACCACTCATTGAAAAAAA-------
--TATCATTCAAGTAAAATTTATTTCAATCAATTTAGAAAACCG-TTTCGCTCACTTGAAAGTACAAATTTTGCTCGTTT
CATTTGAAAAGGGGTGCTTGAATTATTTCACTCATTTTAGAAAACCGA-----------------------TTTCAATCA
TTTTGACTTAAAATATATGTTTCAAGTCTTTGAAATAATTTATATCTATGAACTTAGTGAAATTTATTTTTTGG-ACTAA
GTGAAATCTACGAAACGAGATA-TTTTTTTGAGACTGTGAAACACGTTATTTCTAAATCTAGTTGAAAATTATTCAAGAT
TGAACTTGTTTTGAAGATCATGTTGAAAGGAATTTGAATATATATAAAA------------------------------A
ATTCAATAACGGATTTTTAATGTGAAAGATAGTGACCATCTAAAATTGTAAGC-AAAAATAAAAAGATGTATTTGTTTGG
AAGGGTAGAGAGAGGAAAGAAGTTGCATGCATGCGTACAGTGTGCTGACAAAAATTGTACCTATAGCTGACATACTACTA
GTGCAAAGTGGTGAAAAGAGGTGGGCCAGCCATCTGACATACAACAATGCTATACGAGAGGTGGGTTATGAGAATACAAG
TGCTATATGAGAGGTGGGCCACGTGAACGCACTAATCGAAAACCACACGAACGGCAGATGGTTTGCCGGTACCTCTAGGA
ACCGGTAAAAGAGACTTTGCG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr2B_1
CAAAATAGTGATTTCACTCGTTACAAAAGATAGATTTCACTCATTTCACTAGTTTCAGAAAACATTTTACACTCACAATA
TAGACATTGAAATAAGGGGTTTCAC-AAAAATAATATTTCAATTTTTTTT---AAATCACTCATTGAAAAAATATCATTG
AGTATCATTCAAATAAAATTTATTTCAACCATATTAGAAAACTGATTTCACTCATTTGAAAGTACAAATTTTGCTCGTTT
CATTTGAAAAGACGTGCTTGAATTATGTCACTCATTTAGGAAACCAATTTTAGTCTTTATAAAAGATTGATTTTCAATCA
TTTTGACTTAAAATATATGTTTCAATTCTTTGAAATTATTTATATATATCAACTTAGTAAAATTTATTTTTTGG-ACTAA
GTGAAATCTATGAAACGAGATA-TTTTT-TGAGACTGTGAAACTCCTTATTTCTAAATCTAGTTGAAAA-TATTTAAGAT
TCAACTTGTTCTAAAAATCATGTTGCAAGGAATTTGAATATATAAAGAA------------------------------A
ATA-AATAACGGATTTTTAATGTGAAAGATAGTGACCATCTAAAATTGTAAGCAAAAAATAAAAAGATGCATTTGTTTGG
AAGGGCAGAGAGAGGAAAGAAGTTGCATGCATGCGTAAAGTGCACTGGCAAAAGTAGTACCTATAGCTGACA---TACTA
GTGCAAAGTGGTGAAAAGCAGTGGGCCAGCCATCTGACATACAACAGTGCTATACGAGATGTGGGTTATGA--ATACATG
TGATGTATGAGAGGTGGGTCACGTGAACGTACGAATCGCAAATTAGACGAACGGTGGATTGTTTGCCGGTACCTCCAGGA
ACCGGTAAAAGAGACTTTGCG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4D_89
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AAAAATATGTTTCAATTCTTTGAAATAATTTATATCTATGAACTTAGTGAAATTTATTTTTTGG-ACTAA
GTGAAATCTATGAAACGAGATATTTTTT-TGAGACTGTGAAACACGTTATTTCTGAATCTAATTGAAAAATATTCAAGAT
CGAACTTGTTCTGAAGATCATGTTGCAAGGAATTTGAATATATATATATATATATATATATATATATATATATATATATA
GTTCAATAACGGATTTTTAATGTGAAAGATGATGACCATCTAAAATTGTAAGC-AAAAATAAAAAAGATGCA---TTTGG
AAGGGCAGAGAGAGCAAAGAAGTTGCATACATGCGTACAGTGCACTGACAAAAGTAGTACCTGTAGCTGACA---TACTA
GTGCAAAGTGGTGAAAAGAGGTGGGCCAGCCTTCTGACATGCAAGAGTGCTATACGAAAGATGGGTTATGAGAATACAAG
TGCTATACGAGAGGTGGGCCACGTGAACGCACGAATCCCAAACCAGACGAACAGCGGATGGTTTGCCGGTACCTCCAGGA
ACCGGTAAAAAGAGGTTTGCG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr3D_89
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AAATATATGTTTCAATTCTTTGAAATAATTTATATCTATGAACTTAGTGAAATTTATTTTTTGG-ACTAA
CTGAAATCTATGAAACTAGGTATTTTTT-TGAGACTATGAAAAACGTTATTTCTAAATCTAGTTGAAAAATATTCAAGAT
TGAACTTGTTCTGAAGATCATGTTGCAAGGAATCTGAATATATATAAAA------------------------------A
GTTCAATAACAGATTTTTATTGTGAAA-ATAGTGATCATCTAAAATCGTAAGC-AAAAATAAAAAGATGGATTTGTTTGG
AAGGGCAGAGAGAGGAATGAAGTTGCATGCATGCGTACAGTGCGCTGGCAAAAGTAGTACCTATAGCTGACA---TACTA
GTGCAAAGTGGTGAAAAGAGGTGGGCCAGCCATCTGACATACAACAATGTTATACGAGAGGTGGGTTATGAGAATACAAG
TGCTATAGGAGAGGTGGGCCACGTCAACACACGAATCGC-AACCAGACGAACGGCGGATGGTTTGCCGGTACCTCGAGGA
ACAGGTAAAAAGAGGTTTGCG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4D_594
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------AGACCGAGGTCCAGGTTGTGGACGAAGGTACGAGCGGCATTCCATTGCGCGGCTACACG
AGCCAGAGAGTCAAAGGTTGCTCCAGCATGAGCCACAAC---TAACTGTGAAGAGGTCAGCACTCAGCAGGCCACCAACC
CAAGCCCGGCCGCGTATGACCAGGTACCTACTAGTAGTGCAGTAGTATAATACTAGTAC---------------------
-TGGCTTTTGTTCAAACGCACATGACTACTCAACCCCAAAATCCAATATCCAAATGCCATTCCACCAACCCATCTCGCTG
GGCGCTTGGTTGTATATAAAGC-GCGCGGCAGCACAA---GCACAGCAGCAACCCCAGC-CCCCGCTAAGCAT-------
----------CAGCCTTCTACCTCCTCTGCTTTGCATTCCTCCTTCCGGTT------CCAGCCGCAATCAATGGCTGCCA
TGAAGATCACCCTCCTCGCCGTGGCCGCGAT---GGCCGTCTTACTAGGCACCGCGTCAGCGGTAACCTACAACGTCGGC
GATCAG---GGCGGT---TGGACCCTTAGCACCGACTACAGCAGCTGGGTGTCCGGCAAGAAGTTCAACGTGGGTGATGA
CATCGTCTTCAAGTACTCGACCCCGGCGCACAACTTGGTCGAGGTCAGCAAGGCCGGCTACGACTCCTGCAGCACCGACG
GCGCCATCAACACCTTGGCCTCGGGCAACGACGTCATCACCCTCAACGCCACCGGCACCCGATACTTCATCTGTGGCGTC
CCTAGCCATTGCAGCCCCACCGCCGCCGCCAGCATGAAGGTCGTGATCGACGTCGCCTCGGGCTCCTCCTC------GCC
GTCGTCACCCATGCCAGCTGCAGGTCCTGGCGCGAGCAACTCTCCCCCGGCGCCGCCCTCCAACGCCGCTACCTCCGTCG
GTGCCACAGCAGGATTTGGCCTCGTCGCCCTACTGGCGGCCGGTCTCATGGCTTG--------AAC-GCATATATTGAT-
---CAGCTGCCGCGCGCACATACGAGCTTTTATATTG---TTAACTACTATACTGTAGTTATTATCACGGGTGAATACAT
GTATTCTTTTTTAGAGCGAGAATGTGATAGTTAC---------TTGTATCTATCACGTCTATATGTAATCTGCAGGCCTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4B_594
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------AGACCGAGATCCAGGTTGTGGACGAAGGTACGAGGGGCATTCCATTGCGCGTTCACAAG
AGCCAT-AAGTC-AAGGTTTCTCCGGCATGAGCCATGAGCCACAACCGTGAAAAGGTCAGCACTCAGCAGGCCACCAACC
CAAGCCCGGCCGTGTATGACCAGGTACGTACTAGT----------------------AC---------------------
-TGGCTTTTGTTCAAACGCACATGACTATTCAACCCCAAAATCCAATATCCAAATGCCACTCCACCAACCCATCTCGCTA
GGCGCTTGGTTGTATATAAAGC-GCACGGCAGCACAA---ATACAACCGCAA-CCCAAC-CCCCGCTAAGCATCAGCACA
ATCTT-------GCCTTCTACATCCTCTGCTTTGCATTCCTCCTTCCAGTT------CCAACCGCAATCAATGGCCGCCA
TGAAGATCACTCTCCTTGCCGTGGCCACAATCTCGGCAGTCTTACTGGGCACCGCGTCGGCGGCGACCTACGGTGTTGGC
GAGCCG---GGCGGTTCGTGGACCCTCAACACCGACTACAGCAACTGGGTGTCCAACAAGAAGTTCCACCCGGGTGATGA
GATCATCTTCAAGTACTCCCCCGCGGCGCACGATGTGGTCGAGGTCAGCAAGGCTGGCTACGACTCCTGCAGCACCGCCA
GCGCCATCAACACCTTCAAGTCCGGCAACGACGTCGTCCCCCTCAACGCCACCGGCACCCGCTACTTCATCTGCGGCATC
ACTGGCCACTGCAGCCCCACCGCCGCCGCCAGCATGAAGGTCGTGATCGACGTCGTCCCGAGTTCCTCCTC------ACC
GTCGTCACCCATGCCGGCTGCCGGTCCGGACGCGAGCAAC------CCGCCGCCACCCTCCTCTACCGCATCCTCTGTCG
GGGCCACAGCAGGATTTGGCCTTGTCGTCCTACTGGTCGCCAGTCTCATGGTTTA--------AAATGCATATTTCAGCC
AGCTGCATGCCGCACGCACATATGAGCTTACATATTG---TTTGACTGGTTATTACTGGGGAATAC--------ATACAT
GTATTATTGCTTAGAGCGAAGATGTGAGAACTACTTTGTAAGTTTGTATCTCTCACGTTTGTATGTAATCTACTGGCCTT
TAGGCA------TTTCATATTGATTTTTGAGGTAAAATTAGTAAAGGTGCGTCAGT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4A_594
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------AGACCGAGATCCAGGTTGTGGACGAAGGTACGAGCGGCATTCCATTGCGCGGCTACACG
AGCCAGAAAGTC-AAGGTTGCTCCAGCATGAGCCACAAC---CAAGTGTGAAGAGGTCAGCACTCAGCAGGCCACCAACC
CAAGCCCGGCCGCGTATGACCAGGTA-GTACTACT----------------------AC---------------------
-TGGCTTTTGTTCAAACGCGCATGACTACTCAACCCCCAAATCCAATATCCAAATGCCACTCCACCAACCCATCTCGCTG
GGCGCTTGGTTGTATATAAAAGCGCACGGCAGCACAA---GCACAGCAGCAACCCCAGC-CCCCGCTAAGCAT-------
----------CAGCCTTCTACCTCCTCTGCTTTGCATTCCTCCTTCCAGTT------CCAACCGCAATCAATGGCTGCCA
TGAAGATCACCCTCCTTGCCGTGGCCGCAATCTCGGCACTCTTACTAGGCACCGCATCGGCGGCGACCTACGGTGTCGGC
GAGCCG---GGCGGTTCGTGGACCCTCAACACCGACTACAGCAACTGGGTGTCCAACAAGAAGTTCCACCCGGGTGATGA
GATCGTCTTCAAGTACTCGACCCCGGCGCACGACGTGGTCGAGGTGAGCAAGGCCGGCTACGACTCCTGCAGCACCGACG
GCGCCATCAACACCTTAACCTCCGGCAACGACGTCATCTCCCTCAACGCCACAGGCACTCGGTACTTCATCTGTGGCGTC
CCTAGCCATTGCAGCCCCACCGCCGCTGCCAGCATGAAGGTCACCATCGAAGTGGTGCCGGGTGCCTCCTC------GCC
ATCGTCACCCATGCCGGCCGCGGGTCCCGGCGCGACCAAC------CCGCCGCCGCCCTCCTCTACCGCAACCTCCGTCG
GGGCCGCAGCAGGATTTGGCCTCGTCGCCCTACTGGCGGCCGGTCTCATGGCTTAAAAAGTTAGAATGCATATTTCAGC-
---TGCATGCCGCACGCACATATCAGCTTACATATTG---TTTGACTGGCTATTACAA-GGAATAT--------ATACAT
GTATTATTGCTTAGAGCGAAGATGTGAGAACTACTACT-----TTCTATCTCTCACGTTTGTATGTAATCTATTATCCTT
TAGGCATTTCATTTTCGTATTGATTTTGGAGGTTAAATTAGTAAAGGTGCACCAGTACAT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4B_848
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CCCCCAACCGGCCTCGCTA
GGCGCTTGCTTCTATATAAAGG-GCATGGCAGCAGA-----CACAACAGCAA-CCCAAA-CCCCGCTAAGCATCAGCATT
CA-GCAGCACCTCCCTTCTACCTCCTCTGCTTTGCATTCCTCCTTCCGGTT------TCAACCGCAATCAATGGCTGCCA
TGAAGATCACCCTCCTTGCCGTGGCCGC------------CTTATTAGGCACCGCGTCAGCGGTAACCTACAACGTCGGC
GAGCAG---GGCGGT---TGGACCCTCAACACCGACTACAGCAGCTGGGTGTCCGGCAAGAAGTTCAACGTGGGTGATGA
GATCGTCTTCAAGTACTCGTCCGCCGCGCACGATGTGGTCGAGGTCAGCAAGGCCGGCTACGACTCCTGCAGCATCGACG
GCGCCATCAACACCTTCAAATCTGGCAACGACGTCATCCCCCTCAGCGCCACCGGCACCCGCTACTTCATCTGCGGCATC
ACTGGCCACTGCAGCCCCACCGCCGCGGCCAGCATGAAGGTCATGATCGACGTCGCCTCGGGCTCCTCTTC------GCC
TTCCTCACCCATGCCAGCCGCAGGTCCTGGCGCGAGCAACTCTCCCCCGGCGCCACCCTCCTCCGCCGCTACCTCCGTCG
GTGCCACAGCAGGATTTGGCCTCGTCGCCCTACTGGCGGCTGGTCTCATGGCTTG--------AAC-GCATATATTGAT-
---CAGCTGCCACGCGCACATATGAGCTTATATATTG---TTAACTACTG--CTGTAGTCATTATCACGGGTGAATACAT
GTATTCTTTTTTAGAGTGAGAATGTGATAGTTAC---------TTGTATCTATCACGTCTATATGTAATCT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4D_860
CTCGCT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TA
GGCGCTTGCTTCTATTTAAAGG-GCATGGCAGCAGA-----CACCACAGCAA-CCCAAA-CCCCGCTAAGCATCAGCATT
CA-GCAGCACCAGCCTTCTACCTCCTCTGCTTTGCATTCCGCCTTCCAGTTCCAATTCCAACCGCAATCAATGGCTGCCA
TGAAGATCGCCCTCCTTGCCGTGGCCGCGAT---GGCCGTCTTGCTAGGCACCGCGTCAGCGGTAACCTACAACGTCGGC
GATCAG---GGCGGT---TGGACCCTCAGCACCGACTACAGCAGCTGGGTGTCCGGCAAGAAGTTCAACGTGGGTGATGA
GATCGTCTTCAAGTACTCGACCCCAACGCACGACGTGGTCGAGGTCAGCAAGGCCGGCTACGACTCCTGCAGCATCGACG
GCGCCATCAACACCTTGGCCTCCGGCAACGACGTCATCACCCTCAACGCCACCGGCACCCGGTACTTCATCTGTGGCGTC
CCTAACCATTGCAGCCCCACCGCCGCCGCCAGCATGAAGGTCGTGATCAACGTCGCCTCGGGCTCCTCCTC------GCC
GTCGTCACCCATGCCAGCTGCAGGTCCTGGCGCGAGCAACTCTCCCCCGGCGCCGCCCTCCAACGCCGCTACCTCCGTCG
GTGCCACAGCAGGATTTGGCCTCGTCGCCCTACTGGCGGCCGGTCTCATGGCTTG--------AAC-GCATATATTGAT-
---CAGCTGCCGCGCGCACATACGAGCTTTTATATTG---TTAACTACTATACTGTAGTTATTATCACGGGTGAATACAT
GTATTCTTTTTTAGAGCGAGAATGTGATAGTTAC---------TTGTATCTATCACGTCTATATGTAATCTGCAGGCCTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4A_860
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CTCGCTA
GGCGCTTGCTTCTATATAAAGG-GCATGGCAGCAGA-----CACAACAGCAA-CCCAAACCCCCGCTAAGCATCAGCAGC
AGTGCAGCACCTCCCTTCTACCTCCTCTGCTCTGCATTCCTCCTTCCAGC------TCCAGCCGCAATCAATGGCCGCCA
TGAAGATCACCCTCCTCGCCGTGGCCGCGAT---GGCCGTCTTACTAGGCAGCGCGTCAGCGGTAACCTACAACGTCGGC
GATCAG---GGCGGT---TGGGCCCTCAGCACCGACTACAGCAACTGGGTGTCCGGCAAGAAGTTCAACGTGGGTGATGA
CATCGTCTTCAAGTACTCGACCCCGACGCACGACGTGGTCGAGGTCAGCAAGGCCGGCTACGACTCCTGCAGCACCGACG
GCGCCATCAACACCTTAACCTCCGGCAACGACGTCATCTCCCTCAACGCCACCGGCACCCGCTACTTCATCTGTGGCGTC
CCTAACCATTGCAGCCCCGCCGCCGCCGCCAGCATGAAGGTCGTGATCGACGTCGCCTCGGGCTCCTCCTC------GCC
GTCGTCACCCATGCCAGCTGCAGGTCCTGGCGCGAGCAACTCTCCCCCGGCGCCGCCCTCCAACGCCGCTACCTCCGTCG
GTGCCACAGCAGGATTTGGCCTCGTCGCCCTCCTGGCGGCCGGTCTCATGGCTTG--------AAC-GCATATATTGAT-
---CAGCTGCCGCGCGCACATACGACTTTATCTTTTGTTATTAACTACTATACTGTAGTTATTATCACGGGTGAATACAT
GTATTCTTTTTTAGAGCGAGAATGTGATAGTTAC---------TTGTATCTATCACGTCTATATGTAATCTGCAGGCCTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4A_949
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GCCTTCCATCTCCTCATCTTTGCATTCCTCCGTCCAGC------TCCAAGCGCAACCAATGGCCGACA
TGAAGATCGCTCTCCTTGCCGTGGCGGCGGC---------CTTGCTGGGCACCGCGTCGGCAGCGACCTACAGGGTCGGC
GAGCCCAGCGGCGTG---TGGGGCATCAACACCGACTACGCTAGGTGGGTGGCCGACAAGAAGTTCCAGCTGGGCGATGA
GATCGTCTTCAAGTACTCGCCCACGGGGCACAACGTGGTCGAGGTCACCAAGGCCGGCTACGACTCCTGCAGCACCGCCA
ACGCTATCAACACCTTCAACTCCGGCAACGATGTTGTCGCCCTCAATGCCACCGGCACCCGCTACTTCATCTGTGGCTTC
ACTGACCACTGCATCCCGGACGCCCCCCTCACCATGAAGATCGTGATCAACGTCGCGTCGGGTTCCTCCTC------GCC
GTCGTCACCCACGCCAGCCGCAGGTCCTGGCGCGAGCAACTCTCCCCCGACGCCGCCCTCCTCTGCCGCTACCACCGTCA
GGGCCGCGGCAGGATTTGGCCTCGTCACCCTACTGGC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr7D_949
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GCCTTCCATCTCCTCTGCCTTGCATTCCTCCGTCCAGC------TCCAACCGCAACCAACGGCCGCCA
TGAAGATCACCCTCCTTGCCGTGGCGGCGGT---------CCTGCTAGGCACCGCGTCGGCGGCGACCTACGGGGTCGGC
GAGCCGAGCGGCGTG---TGGGGCATCAACACCGACTACGCCAGGTGGGTGGCCGACAAGAAGTTCCAGCCGGGCGATGA
GATCGTCTTCAAGTACTCGCCCACGGCGCACGACGTGGTCGAGGTCAGCAAGGCCGGCTACGACTCCTGCAGCACCGCCA
ACGCCATCAACACCTTCAGCTCCGGCAATGATGTCGTCGCCCTCAACGCCACCGGCACCCGCTACTTCATCTGCGGCTTC
CCTGACCACTGCGTCCCGCGCGCCCCCCTCACCATGAAGATCGTGATCGACGTCGTGTCGGGCTCCTCCTCCTCCTCACC
GGCGTCACCCATGCCAGCCGCAGGTCCTGGCGCGAGCAGCTCTCCCCCAGTGCCGCCCTCCTCCGCCGCTACCTCCGTAG
GGGCCACGGCAGGATTTGGCCTCGTCGCCCTACTGGCGGCAGGTCTCATGGCCTG--------AAC-GCATATATTGAC-
---CAGCTGCGGCGTGCACAC-TGAGCTTATATATTG---TTT-------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>SNPs
--------------------------------------------------------------S---------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-------------------------------------------------S--
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
-----------S-----------S------------S-------------------------------------------
---------------------------------------S----------------------------------------
--------------------S-----------------------S-----------------------------------
--------S-----------------------------S----------------------S------------------
S--------S-----------------------S------------------------------S---------------
--------------------------------------------------------------S-----------------
----------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSS
S-----------------------------S-------------------------S-----------------------
----------------------------------S--SSS---S------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
------------------S-------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------S-----S-----------------------------------------------------
-----------------------------------------------S-----------------------------S--
-------------------------------------------S----------------------S-------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S-----------S--SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_914
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--------------CTTTGCGAGACCGAGATCCT----------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>reverse_2765
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------TACTCCCTCCGTCCGGAATT----------------
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---------------------------------------------------
