>input_sequence_77152
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-----------ATGTCGATATCCTCTAGCTCCAACAAGACGCTGCCCTACTCGGCGGACGGTGGCAGCTACAGCACCCAC
GACACGCTCGCCCTCCTCGTCATCGGCTTCAGCGTCACCGCCGTCTGCGTCTTCATAATCGCGCTGTTCGATTGCCTGTG
CTGCCGCCCGCGCCGCGCCGGCGGCCGCAGGATCGTCTTCGTGGGCGCCCGGCCGTTCTTGGTGCGTGCCGGCGGCGACG
GTGGGCTGAGCCCCACGGCCGTGGCCGGGCTGCCGTCGTTCTTGTACCACAGAGGCTTGGCCGTCCGCGGCAACGGCGAT
TCGGACGGTCGTGGCGAAGGCAGCGGCGGTGGCCGCGGGTGGGCGCAGTGCGCGGTGTGCCTCAGTCTGGTGAAGGAAGG
GGAGGTGGTGAGGCAGCTGCCGGCGTGCATGCACCTGTTCCATGTAGGCTGCGTCGACACCTGGTTGCACTCCCACTCCA
CTTGCCCTCTGTGCAGGGCCACGGTAGAGCCCCCTTCGAAAGACCAGGTGCCTCCTGTGTGA------------------
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>chr2A_1_TraesCS2A01G156600
AAATGTAGGAGGCAGAGCTAGCAGAATAAGTTTAGCCTTGAACTATCATCTTTTGTGAGAATTCATGCTACGGCCATGGT
CTTGAAGCAGAC-TTTCGCCTCGCTTTGTACATAAAGCAAATCATCATATCCCAACATCATGTTCATGTGTTAGATTTTT
TAAA--GATCTACAGGGGCAACAACACAGGCATGCCCAAATGAGAAAACAAAAAAAAAAGAAAAAGAATACAAGGCTCCA
CGAAGCCGACTACTCGCGGCGAAGAGGCTAAGAAAGTGGCGCGCTTGCTTCCG---------------------------
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---------GTCCCGCTGCTCATGTGACAACTGCAATATGCCTAATGCTTGATAA-GCCCTCTATTTTCCTGCAAAAAAT
GAATTCCCTCTGGGCATGTTGTCAGAAAAAGAAAACAACGGAAAAACACTCCAGGATATATCCATAACTGCTACCTATTC
CATTGACCTACTGCACAAATGAA--------GATTAACTAAACTAACCAGAGTTGCCAAATGTCATCATTTGGTTATGTC
AGCGGCAAATGTCACCATTTGGTTATGTCAGTGGTTGAGAAACCTAGCTAGTTGTAATTGTTAACCTACGAGACGACTGT
CTAACAGGATGAAAGGGCCATCCGAACAATTGCCATATATGGTTTGGATAAGAACAATGGCCATAAACAATGGAAAGCAT
GACATGAACCTAGATCACGAACGATTTTGATCTATTTGGATATTCCAGTGTACCGTGTTATGCATGACGCCATACAGAGA
TGATTACGATTGGCGACTAGTTATGTGACTAATCTAAAATTAGTTGCATAACTGCCGTCCTTGAAACGCTCAAAAAACTC
GGAATATATTTTACTTCTAGCGTTGCGTATATACTAGCGACCAATTCCCTGCTCAGCCTCCAAAAATATAAGATACCAGC
AATATAGCTCAA---AGCTTGCAGACGAGCTAAGCTACCTTATAGTAGGTGACACGGCTAGAAACTAGCTAGAGCAGTTC
GTCGACCGGCCATGTCGATATCCTCTAGCTCCAACAAGACGCTGCCCTACTCGGCGGACGGTGGCAGCTACAGCACCCAC
GACACGCTCGCCCTCCTCGTCATCGGCTTCAGCGTCACCGCCGTCTGCGTCTTCATAATCGCGCTGTTCGATTGCCTGTG
CTGCCGCCCGCGCCGCGCCGGCGGCCGCAGGATCGTCTTCGTGGGCGCCCGGCCGTTCTTGGTGCGTGCCGGCGGCGACG
GTGGGCTGAGCCCCACGGCCGTGGCCGGGCTGCCGTCGTTCTTGTACCACAGAGGCTTGGCCGTCCGCGGCAACGGCGAT
TCGGACGGTCGTGGCGAAGGCAGCGGCGGTGGCCGCGGGTGGGCGCAGTGCGCGGTGTGCCTCAGTCTGGTGAAGGAAGG
GGAGGTGGTGAGGCAGCTGCCGGCGTGCATGCACCTGTTCCATGTAGGCTGCGTCGACACCTGGTTGCACTCCCACTCCA
CTTGCCCTCTGTGCAGGGCCACGGTAGAGCCCCCTTCGAAAGACCAGGTGCCTCCTGTGTGATTACTGCGAGATTTGCAC
AGAGTTTTCTGTGCTATGTAGCATG--------TATTTTTGTACACATCAGATGTAGAAATTGCTGTGCTGCGAGTGCGT
ACCAAGAATTCTGCACCAAACTAGTTTCACC--TGTTATGTTCTCTACTTTTTCTCTGGATGTCGTTC---ATGCTTGAA
TGTAGTTTGGGGA----------------------TGAAATGGTTGATCCAGACTGATTGGCCCTGACATAAAAGTC---
-----CCTTATTGGTTCTTGAAATTGACTTGTAATAGAGAAATCATCTTCATAGTCAACGTGCTTTCGTTTATTCTAATC
CTTTT--TTTTGCAAGAAATCCCGATTGAGGACAACACTATTGGTCTATCTCACCGGGGTTGGTGTTGACCGCAAATGCT
ACATGCCACCCGTGGCAGCATATAAGCGGCGGATAACCCATAGGCGATTGGGATTGGGATTGCGGCTTAGTTGGCGGTGT
TTTC-----TTTTTGCGAAGATACATAAACACATTTGACTGGTTCTTGAGAT----------------------------
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----------------TGACTTGTAATAGAGAAATCGTCTTCATAGTCAATGTGCTTTCTTTGGTTTTTCGAAAAAATCC
CGGCTGAGGCCTACCGTGTTGGTTGACCACTCCGGGGCTGGCACTGATCCAATAGGGATTAAACGGGCCTCGTCTTGTAG
GAATTTGGAATTTTGCATTTTTTATTAGGATCACGTCGAAGACTTAGTAGAACTCACCCAATAATATTGTGTGCACACAA
CTACATTACGAGATCTTATCAATACAAAGAATGAAGAAATACCCTATAATAGTGTCTGTTGCCTGCCC---ACCATGATA
TTGCACATGATTCTTCGTGCAAATTTCAGAACACATAACCAGCCCTTGTAGCATGATGACTTGGGGCTTCCACGATCGAC
GTTGACCAAAGGAGGCATGAAGCCCTCCAACAAAGTTAGGACTTTTACCTTGGCCAAAAGCACCCTCCCGTTCCCCTATC
TCGAGAGGGAGCCTTGGCCCAGTCCAAAATATCCACACC
>chr2B_1
AAATGTGGGAGGC--AGCTAGCAGAATAAGTTTAGCCTTGAACTATCTTCTTTTGTGAGAATTCATGCTACGGCCATGGT
CTTGAAGCAGAC-TT-CGCCTCACTTTGTACATAAAGCAAATCAGCATATCCCGACATCATGTTCATGTGTTAGATTTTT
TTTAAAAATCTACAGGGGCAACAACACATGCATGCCCAAACGAGAAAAC-AAAAAG-AAGAAAAGGAATACAATGCTCCA
TGAAGCCGACTACTCGCGGCGAAGAGGCTAAGAAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGTCCTGCTGCCCATGTGACAAATTTAATATGCCTAACGATTAATAAGGCCCTCTA-TTTCCTGCAAAAAAT
GTATTCCCTCTGGGCATGTTATCAGAAAAAGAAAACAATGGAAAAACACTCCAGGATATATCCATAACTGCTACCTATTC
CATTGACCTACTACACAAATGAACAATGATTGATTAACTTAACTAACCAGAGTTGCCAAATGTCATCATTTGGTTATGTC
AGCGGCAAATGTCACCA-TTGGTTATGTCAGTGGTTGAGAAACCTAGCAAGTTGTAATTGTTAACCTACGAGACGACTGT
CTACCAGGATGAAAGGGCCATCCGAACAATTGCCATATATGGTCTGGATAAGAACAATGGCCATAAATAATGGAAAGCAT
GACATGAACTTAGATCACGAATGATTTTGATCTATTTGTATATTCCAGTGTACCGTGTTATGCATGACGCCATACAGAGA
TGATTACGATTGGTGACTAGTTATGTGACTAATCTAACATTAGTTGCATAACTGCCATCCTTGAAACGCTCAAAAAACTC
GGAATATATTTTA-TTCTAGCGTTGCATATATACTATCGGCCAATTCCAGGCTCAGCCTCCAAGAATATAAGATACCAGC
AATATAGCTCAAAGCAGCTTGCAGACGAGCTAAGCTACCTTA---TAGGTGACACGGCTAGAAACTAGCTAGAGCAGCTC
GTCGACCGGCCATGTCGATATCCTCGAGCTCCAACAAGACGCTGCCCTACTCGGCGGACGGTGGCAGCTACAGCACCCAC
GACACGCTCGCCCTCCTCGTCATCGGCTTCAGCGTCACCGCCGTCTGCGTCTTCATAATCGCGCTATTCGATTGCCTGTG
CTGCCGCCCGCGCCGCGCTGGCGGCCGCAGGATCGTCTTCGTGGGCGCCCGGCCGTTCTTGGTGCGTGCCGGCGGCGATG
GTGGGCTGAGCCCCACGGCCGTGGCCGCGCTGCCGTCGTTCTTGTACCACAGAGGCGTGGCCGTCCGCGGCAACGACGGT
TCGGACGGTCGCGGCGAAGGCAGCGGCGGTGGCCGCGGGTGGGCGCAGTGCGCGGTGTGCCTCAGTCTGGTGAAGGAAGG
GGAGGTGGTGAGGCAGCTGCCGGCGTGCATGCACCTGTTCCATGTAGGCTGCGTCGACACCTGGTTGCATTCCCACTCCA
CTTGCCCTCTGTGCAGGGCCACGGTGGAGCCCCCTTCGAAAGACCAGGTGCCTCCTGTGTGATCAATGCGAGATTTGGGC
AGAGGTTTATGTGCTATGTAGCATCATACAGTATATTTTTGTACATATCAGATGTAGAAATTACTGTACTACGAGTGCGT
ACCAAGAATTCTGCTCCAAACTAGTTTCATGCGTGTTCTGTTCTCTGCCCTTTCTCCGGATGTCTTTGTTCATGCTTGAA
TGTGGATTGGGGAGGATCAATTGTGAATAGAAGGATGAAATGGTTGATCCAGTCTGATTGGTCCTGACATAAAAGTCCCT
TATTGCCTTATTGGTTCTTGAGATTGACTTGTAATAGAGAAATCATCTTCATAGTCAACATGCTTTCGTTTATTCTAATC
CTTTTTTTTTTGCAAGAAATCCTGATTGAGGACCACACTATTGGTCGATCTCACCGGGGTTGGTGTTGACCGCAAATGCT
ACATGCCACCCGTGGTAGCATATAAGTGGCAGATAACCCATAGGCGGTTGGGATTGGGATTGCGGCTTAGTTGGCGGTTT
TTTTCTTTTTTTTTGCAAAGATACATAAACACATTTGATTGGTTCTTGATATTGAGAGCGTGTTTGTTTCCAGGGACTTA
TTGGCTTAGGGACTTAAAAAAGTTTCTATAACTCCCATCTAAACCAAACAGGAGGGACTTATAGGGACTTAAAGTGGGCA
TTTGGGACTTATGAAATAAGACTCTCAAGGAGGGACTTATAGAGACTTATAATTGTAATATGGTCTTATATGGGCTTATA
AGTCCCAGGAACCAAACAGGTAGGGACTTTTTAGGGACTTGGGACTTATAAGTTGGGACTAAAAAAAGTCCTAGGACTTA
TGAACCAAACGGGGCCTGACTTGTAATAGAGAAATTGTCTTCATAGTCAACGTGCTTTCTTTGGTTTTTTGAAGAAATCC
CGGCTGAGGCCTACCATGTTGGTTGACCACTCTGGGGCTGGCACTGACCCAATAGGGATTAAAGGGGCCTCGTCTTGCGG
GAATTTGGAGTTTCACATTTTTTATTAGGATCACGTCAAAGACTTAGTAGAACTCACCCAATTATATTGTGTGCACACAA
CTACATTACAAGATTTGATCAATACAAAGAATGAAGAAATACCCTATAACAGTGTCTGCTTCCTGCCCACGACCATGATA
TTGCACATGATTCTTCATGCAAATTTCAGAACACATAACTAGCCCTTGTAGCATGATGACTTGGGGCTTCCACGATCGAT
GTTGACCAAAGGAGGCATGAAGCCCTCCGGCAAAGTTAGGACTTTTACCTTGGCCAAAAGCACCCTCCCCTTCCCTTATC
TCGAGAGGGAGCCTTGGCCTAGTCCAAAATACCCACA--
>chr2D_1
AAATGTAGGAGGC--AGCTAGCAGAATAAGTTTAGCCTTGAACTATCTTCTTTTGTGAGAATTCATGCTACGGCTATGGT
CTTGAAGCAGACTTT-CGCCTCGCTTTGTACATAAAGCAAATCACCATATCCCAACATCATGTTCATGTGTTAGATTTTT
TTTAAGGATCTACAGGGGCAACAACACAGGCATGCCCAAACGAGAAAAC-AAAAAGAAAGAAAAGGAATACGAGGCTCCA
TGAAGCCGACTAGCTTCCGG------------------------------------------------------------
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----------------------------AACTGTAGTATGCCTAATGATTAATAAGGCCCTCTATTTTCCTGCAAAAAAT
GAATTCCCTCTGGGCATGTTGTCAGAAAAAGAAAACAACGGAAACTT----CAGGATATATCCATAACTGCTGCCTATTC
CATTGACCTACTACACAAATGAACAATGATTGATTAACTTAACTAATCAGAGTTGCCAAATGTCATCATTTGGTTATGTC
AGTGGCAAATGTCACCATTTGGTTATGTCAGTGGTTGAGAAACCTAGCTAGTTGTAATTGTTAACCTACAAGACGACTGT
CTAACAGGATGAAAGGGCCATCCGAACAATTGCCATATATGGTTTGGATAAGAACAATGGCCATAAATAATGGAAAGCAT
GACATGAACTTAGATCACGAATGATTTTGATCTATTTGGATATTCCAGTGTACCGTGTTATGCATGACGCCATACAGAGA
TGATTACGATTGGTGACTAGTTATGTGACTAATCTAACATTAGTTGCATAACTGCCGTCCTTGAAACGCTCAAAAAACTC
GGAATATATTTGACTTCTAGCGTTGCATATATA---GCGGCCAATTCCAGGCTCAGCCTCCAAGAATATAACATACCAGC
AATACAGCTCAA---AGCTTGCAGACGAGCTAAGCTACCTGA---TAGGTGACACGGCTAGAAACTAGCTAGAGCAGTTC
GTCGACCGGCCATGTCGATATCCTCGAGCTCCAACAAGACGCTGCCCTACTCGGCGGACGGTGGCAGCTACAGCACCCAC
GACACGCTCGCCCTCCTCGTCATCGGCTTCAGCGTCACCGCCGTCTGTGTCTTCATAATCGCCCTATTCGATTGCCTGTG
CTGCCGCCCGCGCCGCGCTGGCGGCCGCAGGATCGTCTTCGTGGGCGCCCGGCCGTTCTTGGTGCGTGCCGGCGGCGATG
GTGGGCTGAGCCCCACGGCCGTGGCCGCGCTGCCGTCGTTCTTGTACCACAGAGGCGTGGCCGTCCGCGGCAACGACGGT
CCGGACGGTCGTGGCGAAGGCAGCGGCGGCGGCCGCGGGTGGGCGCAGTGCGCGGTGTGCCTCAGCCTGGTGAAGGAAGG
GGAGGTGGTGAGGCAGCTGCCGGCGTGCATGCACCTGTTCCATGTAGGCTGCGTCGACACCTGGTTGCACTCCCACTCCA
CTTGCCCTCTGTGCAGGGCCACGGTAGAGCCCCCTTCGAAAGACCAGGTGCCTCCTGTGTGATCGATGCGAGATTTGTGC
AGAGTTTTCTGTGCTATGTACTGTAGC-----ATATTTTTGTACATATCAGATGTAGAAATTACTGTACTACGAGTGCGT
ACCAAGAATTCTGCACCAAACTAGTTTCACC--TGTCATGTTCTCTACCCTTTCTCTGGATGTCGTTG---ATGCTTGAA
TGTAGATTGGGGAGGATCAATTGTGAATAGAAGGATGAAATGGTTGATCCAGTCTGATTGGTTCTGACATAAAAATC---
-----TCTTATTGGTTCTTGACATTGACTTGTAATAGAGAG-TCATCTTCATAGTCAACGCGCTTTATTTTCTTCTAATC
TTTCTTTTTTGACAAGAAATCATCTCCGATGCCCATACTATTGGTCGACATCACAAGAGTTGGTGTTGACCACGAATGCT
ATATGCTGCCTCTTGCAGCATATAAGTGGCGGATAACCCATGGGCGATTGCGATTGGGATGGCGGCCTAGTAGGCGAC--
------TTTTTTTTGCGGGAATACATAAACGCATCTGATTGGTTCTTGAGAT----------------------------
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----------------TGACTTGTAATAGAGAAATTGTCTCCATAGTCAACGTGCTTTCTTTGGGTTTTCGAAAAAATCC
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>SNPs
-------------SS--------------------------------S--------------------------------
---------------S----------------------------S-----------------------------------
-SS-------------------------------------S--------S-----S--------S---------------
S-------------------------------------SSSSSSSSSSSSSSS---------------------------
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-------------S-----S-------------S-------------S--S-----------------------------
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------------S--------------------------S----------------------------------------
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-------------------------------------------------------------------S------------
---------S-----------S----------------------------------------------------------
-------------S-----------------------S------------------------------------------
--------------------------S------------S--------SS-------------S----------------
------------------------------------------SSS-----------------------------------
-------------------------S------------------------------------------------------
-----------------------------------------------------------------S--------------
------------------S-----------------------------------------------------------S-
---------------------------S----------------------------S------------------S--S-
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---------------------------------------------------------------S-S-----------SS-
------------------------S--------------------S----------------S----S--S---------
------------------------------------------------SS-----------------S------------
-----S----------------------------------------------S--------S------------------
---------------------S----------------------------------------------------------
----------------------S----------S------------S---------------------------------
--------------------------S---------------------------------------------------S-
---S----------------------------------S-----------------------------------------
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-----------------------------------S--------------S-----------------------------
---------------S----------------S--------------S---------------S-------------SS-
---------S---SS----------------------S------------------------S-----------------
---------S----S-S--------------------------------S--------S-S-------------------
----------------S----------------------S---------------------------------------S
----------------------------SS---------------------------------------S-----S----
-------------------S-----------S-----SS
>forward_514
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--------------GCTGCTCATGTGACAACTGC----------------------------------------------
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>reverse_2859
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----------------------------------------------------------TTGCCTGCCCACCATGATAT--
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