>input_sequence_77106
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ATGGAGGCCAAGCTCGTACTGATCCT
TGCAGCCTGTATCTTGCTTTCCTTCATCAGCAACAAAGGTACGCATGTACTATAGTATATAAACTGTTTTTTGCACACAC
AAGGAAGAGGAACTCGGCATTTCCGGACACCAAAACAAACACCAGGAACTAACAAGTGGGCAACGCAGGCCATGCGCAGC
CGTGCGCACCGTCGGATCTCCTCGTCAACCACACCACCATGCCGGGGAAGGTCGGAGGGCGCCCGCACTACCTGATGACG
GTGGAGAACAGGTGCGTCTGCACGCAGCTCGGCGTGAAGCTGGCGTGCGCGGGGCTCAACTCCACCGTCAGCGTCGACCC
GGCCGGCGTGGTCGTGCCGACCGGGGACGACGGCGCGCTCTGCACTCTCAACGGCGGTCAGCCGATGCATGCGAACGAGA
CGGTCTTGTTCGTGTACGCTTCGAGCATGGAAATCAGCTTCAGGCCCGTCTCGTCGTTCCTCGACTGCTCCATAGCCCCC
TCGCCGGCTCCGCAGGCTGCACCCTGA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr1D_1_TraesCS1D01G307000
AGGCTGACATGTTAATCCGGATGTAGACACTAGACAAGCATGCTGGATTCTTCCCTATGATGAACAGTGCAAGCAGCTAG
GCGCCTAGGTCAAACTTTATAAAGTTTAACTTTGACAAAATATTATATGCAGACTAAAAAGAAACGGAGAGAGCATTTGC
AGTCTCCCGTCCTAGACCTGCTAATGCAACGTGTGGTACAGGGCCGGGTCCAGATCTTGAGCAACTGTTCTCTCGACGGA
CGGGACTGATAACCGGGTGCCTAGACACC-GGGTATTCAAAATCCATTATTGTTGGAACCAACATCAACTTTTGCTATCA
CGGTCTTAGATTTTGCTAGAACCAGCCCACATTTTTGCTACCCCTAGCTTCGGCTATAACTGACGTTGTTGTCGCCATTG
ATGCTGCAACCGGGGGTGGGCAGCACCGGAGAGGAAGGGTGTCGCGGTCGGCGTTGTGGAGCTACCATGGATGCATCAGG
GAGGCGGCGAAAAAGTTGCTACGGCCAACGGCCTTTTTGTTTTGTGATTGACGACGTCGAGCGTCGGGGGCGAGGCAAAC
GGGCAAGGGTGGCCCGCTCAGGCGCCTGGCATGAGGGAGGGAGCGTAGACGCGGGGGAGGGGGCAGTCGCTATGGTTTTT
TCTCGTGTTCTTTTCAGATTTGGACAAGGGTAAAAGACGATTGGAAACCAAGCCATCGGCGACGGGTGCCTATTATTGGC
CAATTTTTTTAATATTGAAGGCAATAAATGCCAAGACCAAACATTTGTCGTTTAATAATTGCTCATTATTCAAACATTGG
ATGTTTTTAAATGCTAACTTATCTTATACTCCTACCATGAATCAAATTAATTCTTCCCAATCAATAAAAGACTTCCTCAT
TTTTCACCGTACAGTGGGCTATAAAAGGCAACCGTGATGCAGAACAGAAACAGAATACAATAGTATACATCATCTCAGCA
ATACAG-------------TTGTCAAAAACCGTGACAACATCTCGTTGATCAGCATGGAGGCCAAGCTCGTACTGATCCT
TGCAGCCTGTATCTTGCTTTCCTTCATCAGCAACAAAGGTACGCATGTACTATAGTATATAAACTGTTTTTTGCACACAC
AAGGAAGAGGAACTCGGCATTTCCGGACACCAAAACAAACACCAGGAACTAACAAGTGGGCAACGCAGGCCATGCGCAGC
CGTGCGCACCGTCGGATCTCCTCGTCAACCACACCACCATGCCGGGGAAGGTCGGAGGGCGCCCGCACTACCTGATGACG
GTGGAGAACAGGTGCGTCTGCACGCAGCTCGGCGTGAAGCTGGCGTGCGCGGGGCTCAACTCCACCGTCAGCGTCGACCC
GGCCGGCGTGGTCGTGCCGACCGGGGACGACGGCGCGCTCTGCACTCTCAACGGCGGTCAGCCGATGCATGCGAACGAGA
CGGTCTTGTTCGTGTACGCTTCGAGCATGGAAATCAGCTTCAGGCCCGTCTCGTCGTTCCTCGACTGCTCCATAGCCCCC
TCGCCGGCTCCGCAGGCTGCACCCTGATGTTCAGTGA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TACTCCGGTAGCCATGCAACGGTGCCGCTTTAGAAAGTGGCACCAACATCTTGTTTCG----------------------
-------------------------------------------------------------TTGTTCGCTCTCGCCGCTG
CATACCGTGCGTCAAAAC-CAAGCGATGACCATAGTCATGGCCAGGTAGTAGAAATTGCCCAGCCGGCGATAAAATGTTT
CATTTCA--TTTTTGAGAAAACAAAGGCTTGTATTTGGGGATCACAAACACAATCGTACATGCGAAAATCA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GGGTCCGAGCAGATAGCTGCCGCCGCGCCTGC---TGCTCGACGCGCCCGCTT
CTTGCCGCGGCCGCCATGCCTCGCTG---CTCGTCGCGCCCGCGGCCGCCACGCCTCTCTGCCACCGCGGCCGCCACGCC
TCGCCGCGGCTGCCGCGCCTTGCTGCTGCCACCGCGCCT-----------------------------------------
-------------CGCCGTGGCCGTCACGCCTCGCTGCT-------------------GCCGCGCCCGCTTCTTGCTCGC
TGTTTGCCGCGCCCGCTGCGTG-------------------------CGCCTGCTGCTCACTGCCGCTGCTCGTCCCAAC
CCTGACCAAGGCAGAGGTCTCCACCGGCAGGATCCCTGCGCCCTCGCAACGGCGGCCTGTGCACTGCACGCAAGTTGTTC
GATGGAATGCCAAAGAGAGGCTTGTTAGGCTGACAAGCGGGACCCATGTCCAGTAAACGTTTTCATGTAACGGTGTGAGA
AATTGGTGCCACGTCAGCCTGACTGGCGGGCCCTATTTGTCATAAACTCACTTAACTGAGCCCGATCCGCCGATCAGTGT
-TTTTTGCAAAAAGATTACCGTAGACGCGGTGTTTTCTGCA----AAAAAA--ATGTATTGTAGTGTTTTTCGCAAGCCT
AGCCTTCAAAGTGGTGGTTT-GTGAAATTTACTCGCAAACAAGTCTAGGAACTCGGCAAACAACGGAGATCCACCCCAAC
CATGTGTCAAACCAAAAGATGGTCCCGTCTGAAAGGATCGATATAGTTGACTAGAGGGGGAGGGTGAATAGGCAACTAAC
ATTTTTTTAGCTTTTCTTTATCAA
>chr1A_88
--------------------------------------------------------------------------------
-------GGTCAAAATTTATAAAGTTTAACTTTGATCAAATCTTATATGCAGACTAAAAAAAATAGAGG-GAGTACTTGA
AGTCTCCCGTCCTAGACCTGCTAATGCAACTAGTGGTACAGGGCCGGGTCCAGATCTCGAGCAGTTGTTCTCTTGATGGA
CGGGGTTGATAACCGGGTGCGTAAACACCAGGGTATTCGAAATCCATTCTTGTTGGAACCAACACTAACTTTTGCTACCA
CTGTCTTAGGTTTTGTTAGAACCAGCCCACATTTTTGCTACCCCTAGCTTTGGCTATAACTGACGCTGGCGTCGCCATTG
ATGCTGAACCCGAGGGTGGGCAGAACCGGCGAGGAAGGGTGTCGCGGTCAGCGTTGTGGAGCTACCATGGATGCAACAGC
GTGGTGGCGAAAAAGTTGCTACGGCCAACGGCCTTTTTGTTTTGTGATTGACGACAGCGAGTGTCGGGGGCGAGGCAAAC
ATGCAAGGGTGGCCCGCTCGGGCGCCTGGCATGAGGGAGTGAGCGTAGACACGAGGGAGGGGACAGTTGCCATGGTATTT
TCTCGTATTCTTTTCAGATGTGAACGAGGTG-AAAGACGATTGGAAACCAAGCCATCGGCAACCGGCATCTATTATTGGC
CAATTTTTT-AATATTGAAAGCAATGAATGCCAGGACCAAACATTTGTCGTTTAATAATTGCTCATTATTCAAACATTGG
ATATTTTTAAATGCTAACTTATCTTATAC------CATGAATCAAATTAATTCTCCCCAATCAATAAAAGACTGCCTCA-
TTTTCACCGCACAGTGGGCTATAAAAGGCAACCGTGATGCAGAACAGAAACACAACACAATAGTATACATCAACTGTGAC
AGCATCTCAGTAATACAATTTGTCAAAAACTGTGACAACATCTCGGTGATCAGCATGGAGGCCAAGCTCGTAGTGATCCT
TGCGGCCTGCATCTTGCTTTCCT---TCAGCAACAAAGGTACGCACTGACT----TATACAAACTG-TTTTTGCACACAA
AAGGAAAGT----------------------AAAACAAACACCAGGAACTAACAATTGGGCAACGCAGGCGATGCCCAGC
CGTGCACACCGTCGGATCTCCTCGTCAACCAAACCACCATGCCGGGGGAGGTCGGAGGGCGCCCGCACTACCTGGTGACG
GTGGAGAACAGGTGCGTCTGCACGCAGCTCGGCGTGAAGCTGGCGTGCGCGGGGCTCAACTCCACCGTCACCGTCGACCC
GGCCGGCGTGGTCGCGCCGGCCGGGGACGACGGCGCGCTCTGCACCCTCAACGGTGGCCAGCCGATGCATGCAAACGAGA
CGGTCTTGTTTGCGTACGCGTCGAGCGCGAAGATCAGCTTCAGGCCCGTCTCGTCCTACGTCGACTGCTCCGTAGCCCTC
TCGCCGGCTCCGCAGGCTGCACCATGATGTCTAGATACTTCCTCCCATTCTTTTTAAGTCTACATATAATTTTTGTTCAA
AGTCAAAGTATCTTTATTTTAACATAACTTACAGAAAAAAAATATCAACATTTACAATATCAAATTAATATTGTTAGATT
CATGCGAGAGTATTAAATGTTATGTGCCTGGGCACCTAGGTGCCCCAAACATATATATAGTATTGTAGTTGTTGATATTT
TTGAAAATAAATTTGATCAAACTTTGCAAAGTTTGACTTAATCCAAATCTAATAAGCGGAATAAAAATGACCGGAGGGAG
TACTCCGGCAGACATGCAACGACAGATGTTTTATTAAACGGAGGCAAGGACTCTATGTAAATTTTTTTAATGAAAACATG
CGCACAGCTTCCTCTCAAACGGCGTCACAGGGTGATGTCCCAAACACTAGTCTTGTTTCATTTGTTCGCCCTCGCCGTTG
CATACCGTGCATCAAAACTCAAGCGATGACCATGGTCATGGCCAGGTGGTCGAAATTGTCCAGCAGGCGATGAAAACATT
TTATTTCATTTTTTGAGAAAACAAGAGCTTGTATTTGGG-ATCACAATCACAATAGTGGAAGGGAAAAGCAGGCTCACGA
TCACGAGCACCACAAGCATCACAAATTTCACGCCTTTGGTTTTTGCCCAATGACCATAATCTCGCAATCTGCTCGGTCAT
TTTCTAAAGCGGCACCAAAAGGTTCGGGCCTTTGATTATGGTCACTGATCTCGAAGCAGGTTTTTGCCCAGTGACCATAA
TGTCACAACCTCTCTAGGACACCACAAAGGGGGCACAGTCCATCGATAGGCCCATGTCATTTGATGACCTCAGTCCTCGA
CGGGAGACAATCAGGCATAAACTGCCACACAAAGATCTTGATCTTAAAATGGGAGGCGTTTTGCACAAAGGTGTGGACCA
CAGAAAGAGTCAGTGCACGACATAGAGTCTGGTATGCCGAGCCGGTAGAGAACACCCCTGACGAGGACAAAAGCATCGAC
AAGAGGGGCCGGCCGAAGGGTGACCCAAGCTACAGTTTTCTCGGGCCCAAGGGGTTGTTTAGATTGCGCCAGGGTCCGCC
TCGCCAATCGCGGGCGCACCAATTTATTGGCGGCCGATTCCGCCACCCGCGTCTCGCCAACAAATTAGCGTTGGATTGAA
CTAGTGCGACAGGGCAGGCCAGGGCACACCGATTATTTGGAAGCCATCTAAACACCTACCCTATGCATGATTAACGCCAA
TATTTTGGATAGGCATCGATGGGCGTCGATCCAAACAGCCCCTAAATGTCCATAGGAACAAGACGTTCCAATTTCCATTG
TGGGCGGCCGAGGCATGCAATATCATCGGGTCCGAGCACATAGCA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AAACAAGTATAGGAACTCGACAAACAACTGAGATCCACCCCAAC
CATGTGTCAAACCAGAAGATGGTCCCGTCT--------------------------------------------------
------------------------
>chr2A_1784
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GCTGCCGCCGCGCCTCT---CTGCCACCACGGC-----
---------------------CGCTG---CTCG------TCGCGGCCTCCACGCCTCGCTGTCGCCGCGCCCGCTT---C
TCTCCACAGCCGCCGCGCCTCACGGCTGCCACCGCGGCTGCTGCTCGCCGCGGCCA--------------------CCGT
TACCACCG--------------CGCCACGCCTCGCTACTGCCGCGCTCGCTGCTCGCCGCCGCGCCCGCTTCTTGCTCGT
TGTCCGCC-------------G-------------------------CGCCTGCTGCTCACTGCCGCTGCTCGTCCCAAC
CCCGGCCAAGGCAGAGGTCGCCACCGGGGGGATCCTTGTGCCCTCGCGACGGTGGCCTGTGCACTGCACGCAAGTTGTTC
GATGGAATGCCAAAGAGAGGCTTGTTAGGCTGACAAGCGGGCCCCATGTCCACCAAACGTTTTCATGTAAAGGTGTGAGA
AATTGGTGCCACGTCAGCATGACTGGCGGGCCCTATTTGTCATAAACTCACTTAACTGAGCCCGATCCGCCGATCAGTGT
-TTTTTGCAAAAAGATTACCGTAGGCACGGTGTTTTCTGCA----AAAAAA--ATGTATTGTAATGTTTTTCGCAAATCT
AGCTTTCAAAGTGGTGGTTC-TCGAAATTT--------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr2A_1784
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GCTGCCGCCGCGCCTCT---CTGCCACCACGGC-----
---------------------CGCTG---CTCG------CCGCGGCCTCCACGCCTCGCTGTCGCCGCGCCCGCTT---C
TCTCCGCAGCCGCCGCGCCTCACGGCTGCCACCGCGGCTGCTGCTCGCCGCGGCCA--------------------CCGT
TACCACCG--------------CGCCACGCCTCGCTACTGCCGCGCTCGCTGCTCGCCGCCGCGCCCGCTTCTTGCTCGT
TGTTCGCC-------------G-------------------------CGCCTGCTGCTCACTGCCGCTGCTCGTCCCAAC
CCCGGCCAAGGCAGAGGTCGCCACCGGCGGGATCCTTGTGCCCTCGCGACGGTGGCCTGTGCACTGCACGCAAGTTGTTC
GATGGAATGCCAAAGAGAGGCTTGTTAGGCTGACAAGAGGGCCCCATGTCCACCAAACGTTTTCATGTAAAGGTGTGAGA
AATTGGTGCCACGTCAGCATGACTGGCGGGCCCTATTTGTCATAAACTCACTTAACTGAGCCCGATCCGCCGATCAGTGT
-TTTTTGCAAAAAGATTACCGTAGGCACGGTGTTTTCTGCA----AAAAAA--ATGTATTGTAATGTTTTTCGCAAATCT
AGCTTTCAAAGTGGTGGTT-------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr2A_1784
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GCTGCCGCCGCGCCTCT---CTGCCACCACGGC-----
---------------------TGCTA---CTCG------CCGCGGCCTCCACGCCTCGTTGCTGCCGCGCCCGCTG---C
TCTCCGCAGCCGCCGCGCCTCGCGGCTGCCACCGCGGCCGCTGCTCGCCGCGGCCA--------------------CCGT
TACCACCG--------------CGCCACGCCTCGCTACTGCCACGCTCGCTGCTCGTCACCGCGCCCGCTGCTTGCTCGT
TGTTCGCC-------------G-------------------------CGCCTACTACTCACTGCCGCTGCTCGTCCCAAC
CCCGGCCAAGGCAGAGGTCTCCACCGGTGGGATCCTTGCGCCCTCGCGACGGTGGCCTGTGCACTGCACGCAAGTTGTTC
GATGGAATGCCAAAGAGAGGCTTGTTAGGCTGACAAGCGGGCCCCATGTCCAGCAAACGTTTTCA-GTAAAGGTGTGAGG
AATTGGTGCCACGTCAGCATGACTGGCGGGCCCTATTTGTCATAAACTCACTTAAATGAGCCCGATCCGCCGATCAGTGT
TTTTTTGCAAAAAGATTACCGTAGACACGGTGTTTTCTGCA----AAAAA---ATGTATTGTAGTGTTTTTCGCAAATCT
AGCCTTCAAAATGGTGGTTC-TCGAAATTT--------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr2A_1784
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------GCTGCCGCCGCGCCTCT---CTGCCACCCCGGC-----
---------------------TGCTA---CTCG------CCGCGGCCTCCACGCCTTGCTGCTGCCGTGCCCGCTG---C
TCTCCGCAGCCGTCGCGCCTCGCGGCTGCCACCGCGGCCGCTGCTCGCCGCGGCCA--------------------CCAT
TACCACCG--------------CGCCACGCCTCGCTATTGCCGCGCTCGCTGCTCGTCGCCGCGCCCGCTGCTTGCTCGT
TGTTCGCC-------------G-------------------------CGCCTGCTGCTCACTGCCGCTACTCGTCCCAAC
CCCGGCCAAGGCAGAGGTCGCCACCGGTGGGATCCTTGCGCCCTCGCGACGGTGGCCTGTGCACTGCATGCAAGTTGTTC
GATGGAATCCCAAAGAGAGGCTTGTTAGGCTGACAAGCGGGCCCCATGTCCAGCAAACATTTTCATGTAAATGTGTGAGA
AATTGGTGCCACGTCAGCATGACTGGCGGGCCCTATTTGTCATAAACTCACTTAACTGAGCCCGATCCGCCGATCAGTGT
TTTTTTGCAAAAAGATTACCGTAGACACGGTGTTTTCTGCACACAAAAAA---ATGTATTGTAGTGTTTTTCGCAAATCT
AGCCTTCAAAGTGGTGGTT-------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr2A_1784
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GCTGCCGCCGCGCCTCT---CTGCCACCACGGC-----
---------------------TGCTA---CTCG------CCGCGGCCTCCACGCCTCGCTGCTGCCGTGCCCGCTG---C
TCTCCGCAGCCGTCGCGCCTCGCGGCTGCCACCGCGGCCGCTGCTCGCCGCGGCCA--------------------CCAT
TACCACCG--------------CGCCACGCCTCGCTACAGCCGCGCTCGCTGCTCGTCGCCGCGCCCGCTGCTTGCTCGT
TGTTCGCC-------------G-------------------------CGCCTGCTGCTCACTGCCGCTACTCGTCCCAAC
CCCGGCCAAGGCAGAGGTCGCCACCGGTGGGATCCTTGCGCCCTCGCGACGGTGGCCTGTGCACTGCACGCAAGTTGTTC
GATGGAATCCCAAAGAGAGGCTTGTTAGGCTGACAAGCGGGCCCCATGTCCAGCAAACGTTTTCATGTAAATGTGTGAGA
AATTGGTGCCACGTCAGCATGACTCGCGGGCCCTATTTGTCATAAACTCACTTAAGTGAGCCCGATCCGCCGATCAGTGT
TTTTTTGCAAAAAGATTACCGTAGACACGGTGTTTTCTGCACACAAAAAA---ATGTATTATAGTGTTTTTCGCAAATCT
AGCCTTCAAAGTGGTGGTT-------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr2A_1784
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GCTGCCGCCGCGCCTCT---CTGCCACCACGGC-----
---------------------CGCTG---CTCG------CCGCGGCCTCCACGCCTCGATGTTGCCGCGCCCGCTT---C
TCTCCGCAGCCGCCGCGCCTCACGGCTGCCACCGCGGCTGCTGCTCGCCGCGGCCA--------------------CCGT
TACCACCG--------------CGCCACGCCTCGCTACTGCCGCGCTCGCTGCTCGCCGCCCCGCCCGCTTCTTGCTCGT
TGTTCGCC-------------G-------------------------CGCCTGCTGCTCACTGCCGCTGCTCGTCCCAAA
CCCGGCCAAGGCAGAGGTCGCCACCGGCGGGATCCTTGTGCCCTCGCGACGGTGGCCTGTGCACTGCACGCAAGTTGTTC
GATGGAATGCCAAAGAGAGGCTTGTTAGGCTGGCAAGCGGGCCCCATGTCCACCAAACGTTTTCATGTAAAGGTGTGAGA
AATTGGTGCCACGTCAGCATGACTGGCGGGCCCTATTTGTCATAAACTCACTCAACTGAGCCCGATCCGCCGATCAGTGT
TTTTT-GCAAAAAGATTACCGTAGGCACGGTGTTTTCTGCA----AAAAAAAAATGTATTGTAATGTTTTTCGCAAATCT
AGCTTTCAAAGTGGTGGTT-------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr3D_1785
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CTGCCACCGCGGCCGC---TGCTCACCGCGGC-----
---------------------CCCCGCACCTCG------CCGCGGCCGCCACGCCTCGCTGCTGTCGCGCCCACTG---C
T---------CGGCGCGCCTCGCTACTACCACCGCGGCCGCTGCTCGTCGTGGCCCCCGCGCCTCGCTGCTGCTATCCGC
TGCCACCGCGCCTCGCCGCGGCCGCCATGCCTCGCTGCTACCGCGCCCGCTGCTTGC-------------------TCGT
CGTCTGCGGCGCCCGCCGCGCC-------------CGCTGCCTGTTGCACCTGCTGCTCACTGCCGCTGCCCGTC-CAAC
CCCAGCCGAGGCAGAGGTCTCCGCCGGCGGGATCCCTGCGCCCTCGCGACGGTGGCCTGTGCACTGCACGCAAATTGTTC
GATGGAATGACAAAGAGAGGCTTGTTAGGCTGACAAGCAGGCCCCATGTCCAGCAAACGTTTTCATGTAACGGTGTGAGA
AATTGGTGCCACAACAGCCTAACTGGCGGGCCTCGTTTGTCATAAACTCATTTAACTGAGCCCGATCCGCCGATCAGTGT
TTTTT-GCAAAAAGATTACCGTAGACGTGGTGTTTTCTGTA---AAAAAA---ATGTATTTTAGTGTTTTTCGCAAACCT
AGTTTTCAAAGTGGTGGTTTTGTGCAATTTACTC----------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr5D_1789
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CGCCTCACCTCGCTGCTGCCACCGCGGC-----
---------------------TGCTG---CTTG------CCGCGGCTACCGTACCTCGCTGCTGCCGAGCCCGCTG---C
TCTCCACGGCCACC----------GCTGCCACCACAGCCGCTGCTCGTC-------------------------------
-----------------GCGGCCGCCATGCCTCGCTGCTGCCGCGCCCGCTGCTCGCCGCCACGCCCGCTGCTTGCTCGC
TGTTCGCC-------------GTACCCACCGCGCCCGCTGCCTGCTGCGCCTGCTGCTCACTGCCGCTGCCCGTCACAAC
CCCATCTGAGGCAGAGGTCTCCACCGGCGGGATCCCTGCGCCCTCACGACGGCGGCCTATGCACTGCACGCAAAGTGTTC
GATGGAATGCCAAAGAGAGGCTTGTTAGGCTGACAAGCGGGCCCCATGTCCAGCAAATGTTTTCATGTAACGGTGTGAGA
AATTGGTGCCACGTCAGCCTGACTAGCGGGCCCTATGTCTCATAAACTCACTTAACTGAGCCCGATCCGCCGATCAGTGT
TTTTT-GCAAAAAGATTACCGTAGACGTGCTGTTTTCTGTA---AAAAAA---ATGTACTGTAATGTTTTTCGCAAACCT
AGCCTTCAAAGTGGTGGTTTTGTGCAATTTACTC----------------------------------------------
--------------------------------------------------------------------------------
------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS-------S--------------------SS----S------------------S--SS-SS-S---S-S---S
------------------------------SS-------------------------S-----SS--------S--S---
----SS--------------S--S--------------S---------S---------------SS-----------S--
-S-------S-----S----------------------------------S--------------S--SS----------
------S-S---S----------S-----S-------------------S-------------------------S---S
-S--S--------------------------------------------------SS----S------------------
SS-----------------S-------------------S----------S--S--------S----S--S-----S---
------S------------S--S--S---SSS----------------------------S--S--SSS-----------
---------S---------S-----S-------S----------------------------------------------
--S--------------------------SSSSSS-------------------S------------------S-----S
---------S------------------------------------------S--S----------------S--SS-SS
-SSSSS------------------------S--------------S--------------------------S-------
---S-----S-------------SSS-------------------SSS---SSSS----S------S------------S
------SSSSSSSSSSSSSSSSSSSSSSSSS------------------------S--------------S----S----
-----S-------------------------S---------------S--------------------------S-----
----------------------------------------------------------------------S---------
--------------S----S-------------------------S--------S--S--------------S-------
----------S-S------S------SS-S-S-----------------------S-S-S-----------S------S-
-----------------------S------SS--SS--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S--S---------SSSSSSS---SSSS-SSS-S-SSS-SSSSS-S-S-SS----------------------
---------------------------------------------------------------------S-------S--
----------S----------------------S-------------S--S-------S-----S------S---SSS--
SSS--SS-----------------SS-------------S-------S------S--SS-S-S-----S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S----------------------------SS----S-SSSSS
SSSSSSSSSSSSSSSSSSSSS------------SSSSSS------------------S-----S-----S----SSSSS-
--S-------S---------S---------------S-------------------------------------------
------------------S-----S-------------------------------------------------------
----------------S---S-----------------------------------------------------------
--S-S-----------------------S------------------S--------------------------------
-----------------------------------------S-----------S--------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
----------------------------------SS--------S----------S--------S---------------
--------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_224
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CGGGTCCAGATCTTGAGCAA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_1453
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGTACGCTTCGAGCATGGAA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_1232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CGGATCTCCTCGTCAACCAC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_3727
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------TTGACTAGAGGGGGAGGGTG--------------
------------------------
