>input_sequence_77096
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----------------------------------------ATGAACGCCTACTGGTACATATACATGCGCACCCGGGGCA
GCGACCTGTCGAAGCTGATCGGCGAGGAACCCATGAAGCGGCGGTACAAGACCTCGGCCGAGGAGGCGGCGTGGGAGTAC
CAGGACGTGGCGTGGAGCCCGCTGGTCCGGCTCCTCGGCGGCAGCGGCGGCAAGGCGTGGCCGGCCGACGAGGCGCGGGA
GAAGGCGGCGGCGTTCGCCGGCGTGCTGGAGGAGAGGGTGAGGAAGCACGGGGCGGAGTACAAGATCCCGGACGGCGACC
TCCGGGCGCAGATCAAGGCCGCGGTGACCAAGGCCGTGCGCGGCGCGTACGCCGGGTTCGTGAAGGCGAACGAGAAGGCG
GTGGCCGGCGGGAGGCGGGAGCTCCTGCAGGTGGACGTCGTCGAGAGCATGGTGAGGCGGGTGTTCGAGGAGATGGGCGA
CGCTGAAGCCGGCGGCAAGAGCATGGGCCGGACGAGGAGCAGCGGCCGGGTACGGCGGGAGAGCGGCAATATCGAAGGGT
TTGAGGCCAACTGA------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G252600
GGCGCTGCTCGGCCTCCAGGATCTCTTCGAGGCGGTCCTGCTCAGGCTCAAGCACGCCGCGCCCGAGGACGATGCCGGCG
CCGTGGGAGAAATGGACGAGTATGAACTCGGCACGGACGGCGAGGTGGACGCCGCCGCGAGGATGGCCAAGACGCTGGCC
GGCAACGACTGCCTGGACATCTGCGTCGACATCTACGTGAAGGCGAGGTACAGGAGAGCGGCCAAGGCGATGATGCGGCT
GGACCCGGCGTACCTCAAGGCTTACACGGCCGAGGCCATCGACGGCATGGAGTGGGAGGCGCTGGAGTCCTCCATGGCGC
TGTGGAGCCCGCACTTCCACGTGGCCATCGCCTCCGTGCTCACGGCGGAGCGCCGTCTGTGCGCGCGGGTGCTCGCGCAC
CTCCCGCCGGCGGTCTGGCCCGAGTGCTTCGCCAAGATCGCCGCGCGCATCGTGGCCGCGTTCTTCCGCTTCGCCGACGG
CGTGGTCGCGGCCGAGCGGGAGCCGCAGAGGCTGTTCAAGCTGCTGGACATGTTCGACGCGGTGGCACGGGAGAGGGAGC
GCCTCGACGCGCTCTTCTCCGGCGAGTCGGCAACGCTGGTCGCCATCCGCGAGCGAGCGAGCGAGGTGGAGCGCGCCCTC
GCGCGCGCCGCGGCCGGCGTGTTCTACGAGTTCGGCCTCCGCGTTGAGACGCACTACATCGCCGGCGCCGGCGCCGGGAA
CGACGCCGTGCACGTGCCCAAGATCGTCCGCTACGCCGTGAACTATCTGAAGTGCCTCGCGTCCGACGACTACCGCGGGC
TCATGGACACCGCGCTGCGAGCGGAGCGCGAGCGCGGCGGCGGCGGCGACGACGGCGATGAGGACGGAGGCGAAACGGGG
AGCGGGGGAGGCCGCGCGGCGCTCGCGGAGGCGGCGTCGAACGTGCTGGAGGCGCTGCACCGGCACGTGGAGGCGGCGCG
CAAGGTGAGCGCGGACGCGGTGGCGGGGCACGTCATGGCCATGAACGCCTACTGGTACATATACATGCGCACCCGGGGCA
GCGACCTGTCGAAGCTGATCGGCGAGGAACCCATGAAGCGGCGGTACAAGACCTCGGCCGAGGAGGCGGCGTGGGAGTAC
CAGGACGTGGCGTGGAGCCCGCTGGTCCGGCTCCTCGGCGGCAGCGGCGGCAAGGCGTGGCCGGCCGACGAGGCGCGGGA
GAAGGCGGCGGCGTTCGCCGGCGTGCTGGAGGAGAGGGTGAGGAAGCACGGGGCGGAGTACAAGATCCCGGACGGCGACC
TCCGGGCGCAGATCAAGGCCGCGGTGACCAAGGCCGTGCGCGGCGCGTACGCCGGGTTCGTGAAGGCGAACGAGAAGGCG
GTGGCCGGCGGGAGGCGGGAGCTCCTGCAGGTGGACGTCGTCGAGAGCATGGTGAGGCGGGTGTTCGAGGAGATGGGCGA
CGCTGAAGCCGGCGGCAAGAGCATGGGCCGGACGAGGAGCAGCGGCCGGGTACGGCGGGAGAGCGGCAATATCGAAGGGT
TTGAGGCCAACTGAAGTTGTTACAGCCTACAGCACGCACGCCATGGATTGCCACACAGTCAAACTTCAGCGTGGAATAAT
AT----TTTTGCATGAAGGTTTTTGTTACTACTACCAATTACTGTAAT-CTGCAATAAATCACAGGCCATTTTCTTCTCA
TTCAATCCAGTGAATGGATGATGTTTTACCACACAACTGGAGA-TTTAAGCAAGCAACCAAGCCATTACATTACCAAGCA
GTCAAGATACACACATGTATCACACA-TACAAGCCAAACCACTGGAACTATACATATTTTGCACACGGCTACCAACTACT
AGTACAGTGTGGATAAGCACACCCTAACATATCCACACTCTTAACATAGATACACTGGTGCGCACAGAATAAACCTTGTG
CCTAGCACCTCCCTACACTGCCTAAGCAAAGTCACGTATGTACAATCTTCC-TTGCTGGAGTTCCATGTTTTGTTAGCAC
TTTGAAGCACCGCGGTTCCAAGTTATGCTTTCTTCCTTGCTGATGAATTTGGCGGGGGTTGAGGCGCCTCCAATGCCTAG
GAGTCGCACTCGGCATCTCCTGGAAGGATTATTATAGGATTAATTAAGACACTTCAAAACACTGGAGCTGAAGCAAAGCA
CTGGGAAGATTA----ACTGATTCATCGTGAAGTATCGCTAGTTCAAGAGGCTCACCTTCACCGCAAAGCTGCTCGACTC
GGCTCGCGGTATGTTTGCCATAGGTGTACTTCCTCAGTGCTTGCAAGTGACCCTTTACACGGCTGACCAGAAGTTCCCGC
TGCTCATCGTTGCATGTTTCAAGTATCTTCTGAACAACATAATTAGCATACTGATCCTTCATCATTGCCTAATTGCATAG
CAAGTGGTTAGCAAATGAACTCACAGGAATTTAATAGTGAACAAGCTTAGAATCTA------------------------
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---------------------------------------------------------GAATCAACGGAATCAGTAACAAT
AGACGGTACAAAGATACA------GGATTCCTCAGTCAGGCTTGGAAA-TGTAACTCTCACTGCTAAATTGTCA
>chr7D_1
GGCGCTGCTCGGCCTCCAGGATCTCTTCGAGGCGGTCCTGCTCAGGCTCAAGCACGCCGCGCCTGCGGACGATGCCGGCG
CCGTGGGCGACACGGACGAGTATGAACTCGGCACGGACGACGAGGTGGACGCCGCCGCGAGGATGGCGAAGACGCTGGCC
GGCAACGACTGCCTGGACATCTGCGTCGACATCTACGTCAAGGCGAGGTACAGGAGAGCGGCCAAGGCGATGATGCGGCT
GGACCCGGCGTACCTCAAGGCTTACACGGCCGAGGCCATCGACGGCATGGAGTGGGAGGCGCTGGAGTCCTCCATGGCGC
TGTGGAGCCCGCACTTCCACGTGGCCATCGCCTCCGTGCTCACGGCGGAGCGGCGGCTGTGCGCGCGGGTGCTCGCGCAC
CTCCCGCCGGCGGTCTGGCCCGAGTGCTTCGCCAAGATCGCCGCGCGCATCGTGGCCGCGTTCTTCCGCTTCGCCGACGG
CGTGGTCGCGGCCGAGCGGGAGCCGCAGAGGCTGTTCAAGCTGCTCGACATGTTCGACGCGGTGGCACGGGAGAGGGACC
GCCTCGACGCGCTCTTCTCCGGCGAGTCGGCCACGCTGGTCGCCATCCGTGAGCGAGCGAGCGAGGTGGAGCGCGCCCTC
GCCCGTGCCGCGGCCGGCGTGTTCTACGAGTTCGGCCTCCGCGTTGAGACGCACTACATCGCCGGCGCCGGCGCCGGGAC
CGACGCCGTGCACGTGCCCAAGATCGTCCGCTACGCCGTGAACTACCTGAAGTGCCTCGCGTCCGACGACTACCGCGGGC
TCATGGACACCGCGCTGCGAGCGGAGCGCGAGCGCGGCGGCG---CCGGCGACGGCGATGAGGACGGGGGCGAAGCGGAG
GGCGGAGGAGGCCGCGCGGCGCTCGCGGAGGCGGCGTCGAACGTGCTGGAGGCGCTGCACCGGCACGTGGAGGCGGCCCG
CAAGGTGTGCGCGGACGCGGTGGCGGGGCACGTCATGGCCATGAACGCGTACTGGTACATATACATGCGCACCCGGGGCA
GCGACCTGTCGAAGCTGATCGGCGAGGAGCCCATTAAGCGGCGGTACAAGACCTCGGCCGAGGAGGCGGCGTGGGAGTAC
CAGGACGCGGCGTGGAGCCCGCTGGTCCGGCTCCTCGGCGGCAGCGGCGGCAAGGCGTGGCCGGCCGACGAGGCGCGGGA
AAAGGCGGCGGCGTTCGCCGGCGTGCTGGAGGAGAGGGTGAGGAAGCACGGGGCGGAGTACAAGATCCCGGACGGCGACC
TACGGGCGCAGATCAAGGCCGCGGTGACCAAGGCGGTGCGCGGCGCGTACGCCGGGTTCGTGAAGGCGAACGAGAAGGCG
GTGGCTGGCGGGAGGCGGGAGCTCCTGCAGGTGGACGTCGTCGAGAGCATGGTGAGGCGGGTGTTCGAGGAGATGGGCGA
CGGTGAAGCCGGCGGCAAGGGCATGGGCCGGACGAGGAGCAGCGGCCGGGTACGGCGGGAGAGCGGCAACATCGACGGGT
TCGAGGCCAACTAAAGTTACTA----CTACAGCACGCACGCCATGGACAACACG---ATCCAATTTCAGCGTGGAATAAT
AT----TTTTGCATGTTGGTTCTTGTTA---CTACCAGTTACTGTAAT-CTGCAATAAATCACAGGCCATTTTCTCCTCA
GTCAACCCAATGAATGGACGATGTTTTACCACACAACTGGAGATTTTAAGCAAGCAACCAAGCCATTACATTACCAAGCA
GTCAAGATACACACATGTATCACACA-TACAAGCCAAACCACTGGTACTATACATATTTTGCACACGGCTACCAACTA--
-GTGCAGTGTGGATAAGCACACCCTAACATATCAACA---------TAGATACACTGGTGCGCACAGAATAAACCTTGTG
CCTAGCACCTCCCTACACTGCCTAAACAAAGTCACATATGTACAATCTTCCTTTGCTGGAGTTCCAAGTCTTGTTAGCAC
TTTGAAGCACCGCGGTTCCAAGTTATGGTTTCTTCCTTGCTGATGAATTTGCCGGGCGTTGAGGCATTCCCGTCGCTTAT
GAGTCACACTCGGCATCTCCTGGAAGGATCATAGGATTA------AATATACTTCAAGATATTGGAGCTGAAGCAAAGCA
CAGGGAAGAAAGGTTGACTGATTCATCATAAAGTATCGCTAATTCAAGAGGCTCACCTTCACCGCAAAGCTGCTCGACTC
GGCTCGCGATATGTTTGCCATAGGTGTACTTCCTCAGTGCTTGCAAGTGACCCTTTACACGGCTGACCAGAAGTTCCCGC
TGCTCATCGTTGCATGTTTCAAGTATCTTCTGAACAACATAATTAGCATACTGATCCTTCATCATTGCCTAATTGCATAG
CAAGTGGTTAGCAAATGAAATCACAGGAATTTAATAGTGAACAAGCTTAGAATCTACTTCCTCTGTTCCTAAATATAAGT
CTTTGTAGAGATTCCACTATGAACCACATACGGATGTATATAGATGTATTTTAAGTATAGATTCATTCATTTTGCTCCGT
ATGTAGTCCATCTAGTGGAATCTCTACAAAGACTTATATTTAGGAACGGAGGGAGTAGAATCAACGGAATCAGTAACAAT
AGACGGTACAAAGATACAGGACTCGGATTCCTCAGTCAGGCTTGGAAA-TGTAACTCTCACTGCTAAATTGTCA
>chr7B_1
GGCGCTGCTCGGCCTCCAGGATCTCTTCGAGGCGGTCCTGCTCAGGCTCAAGCACGCCGCGCCTGCGGACGATGCCGGCG
CCGTGGGCGACACGGACGAGTATGAACTCGGCACGGACGACGAGGTGGACGCCGCCGCGAGGATGGCCAAGACGCTGGCT
GGCAACGACTGCCTGGACATCTGCGTCGACATCTACGTGAAGGCGAGGTACAGGAGAGCGGCCAAGGCGATGATGCGGCT
GGACCCGGCGTACCTCAAGGCTTACACGGCCGAGGCCATCGACGGCATGGAGTGGGAGGCGCTGGAGTCCTCCATGGCGC
TGTGGAGCCCGCACTTCCACGTGGCCATCGCCTCCGTGCTCACGGCGGAGCGGCGGCTGTGCGCGCGGGTGCTCGCGCAC
CTCCCGCCGGCGGTCTGGCCCGAGTGCTTCGCCAAGATCGCCGCGCGCATCGTGGCCGCGTTCTTCCGCTTCGCCGACGG
CGTGGTCGCGGCCGAGCGGGAGCCGCAGAGGCTGTTCAAGCTGCTCGACATGTTCGACGCGGTGGCACGCGAGAGGGACC
GCCTGGACGCGCTCTTCTCCGGCGAGTCGGCAACGCTGGTCGCCATCCGCGAGCGAGCGAGCGAGGTGGAGCGCGCCCTC
GCGCGCGCAGCGGCCGGCGTGTTTTACGAGTTCGGCCTCCGTGTTGAGACGCACTACATCGCCGGCGCCGGCGCCGGGAC
CGACGCCGTGCACGTGCCCAAGATCGTCCGGTACGCCGTGAACTATCTGAAATGCCTCGCGTCCGACGACTACCGCGGGC
TCATGGACACCGCGCTGCGAGCGGAGCGCGAGCGCGGCGGCG---GCGGCGACGGCGATGAGGTCGGGGGCGAAGTGGAG
GGCGGAGGAGGCCGCGCGGCGCTCGCGGAGGCGACCTCGAACGTGCTGGAGGCGCTGCACCGGCACGTAGAGGCGGCGCG
CAAGGTGTGCGCGGACGCGGTGGCGGGGCACGTCATGGCCATGAACGCGTACTGGTACATATACATGCGCACCCGGGGCA
GCGACCTGTCGAAGCTGATCGGCGAGGAGCCCATGAAGCGGCGGTACAAGACCTCGGCCGAGGAGGCGGCGTGGGAGTAC
CAGGACGCGGCGTGGAGCCCGCTGGTCCGGCTCCTTGGCGGTGGCGGCGGCAAGGCGTGGCCGGCCGACGAGGCACGGGA
GAAGGCGGCGGCGTTCGTCAGCGTGCTGGAGGAGAGGGTGAGGAAGCACGGGGCGGAGTACAAGATCCCGGACGGCGACC
TCAGGGCGCAGATCAAGGCCGCGGTGACCAAGGCCGTGCGCGGCGCGTACGCCGGGTTTCTGAAGGCGAACGAGAAGGCG
GTGGCCGGCGGGAGGCGGGAGCTCCTGCAGGTGGACGTCATCGAGAGCATGGTGAGGCGGGTGTTCGAGGAGATGGGCGA
CGGTGAAGCCGGCGGCAAGGGCATGGGCCGGACGAGGAGCAGCGGCCGGGTACGGCGGGAGAGCGGCAATATCGAAGGGT
TCGAGGCCAGCTGAAGTTG-------CTACAGCACGCACGCCATGGATTGCCACCCAATCCAATTTCAGCGTGAAATAAT
ATGTATTTTTGCATGAAGGTTCTCATTT---CTGCCAATTACTGTAACCCTGCAATAAATCACAGGCCATTTTCTCTTCG
GTCAATCCAATGAATGGACGATGTTTTACCACACAACTGGAGATTT-AAGCAAGCA--------ATTACATTACCAAGCA
GTCAAGATACACACATGTATCACATACTACAAGCCAAACCACTATTACTATACATATTTTGCAAACGGCTACCAACTA--
-GTACAGTGTGGATAAGCACACCTAAACATATCCACACTCTTAACATAGATACACTGGTGCGCACAGAATAAACCTTGTG
CCTAGCACCTCCCTACACTGCCTAAACAAAGTCACATATGTACAATCTTCC-TTGCTGGAGTTCCAAGTTTTGTTAGCAC
TTTGAAGCACCGCGGTTCCAAGTTATGGTTTCTTCCTTGCAGATGAATTTGTCGGGCGTTGAGGCACTCCCGTCGCTTAT
GAGTCGCACTCGGCATCTCCTGGAAGGATCATAGGATTA------AAGACACTTCAAGATACTGGAGCTGAAGCAAAGCA
CAGGGAAGAAAGATTGATTAATTCATCGTAAAGTATCGCTAGTTCAAGAGGCTCACCTTCACCGCAAAGCTGCTCGACTC
GGCTTGCGATATGCTTGCCATAGGTGTACTTCCTCAATGCTTGCAGGTGACCCTTTACACGGCTGACCAGAAGTTCCCGC
TGCTCATCGTTGCATGTTTCGAGTATCTTCTGAACAACATAATTAGCATACTGATCCTTCATCATTGCCTAATTGCATAA
CAAGTGGTTAGCAGATGAACTCACAGGAATTTAATAGCGAACAAGCTTAGAATCTA------------------------
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---------------------------------------------------------GGATCAACAGAAACAGAAGCAAT
AGCCGGTTCAAAGATACAGGACTCAGATTGCTTAGTCAGGCTTGGAAAATGTAACACTGACGGCTAAATTGTCA
>SNPs
---------------------------------------------------------------S-S--------------
-------S--S-S--------------------------S----------------------------------------
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----------------------------------------------------S--S------------------------
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---------------------------------------------S--------------------------------S-
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-------------------------------------------------------------------------------S
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------------------------------------------SSS---S------------------S------S---S-
S----S--------------------------------------------------------------------------
-------S----------------------------------------S-------------------------------
----------------------------S---------------------------------------------------
-------S------------------------------------------------------------------------
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--S----------------S------------------------------------------------------------
-S-----------------S--SSSS----------------------------S--S--S--S----------------
---------------------S------SSS--------------------------------------------S----
S--------S--------S-------------------------------------------------------------
---------------------------------------------S--------------------------------SS
S-------------------------------------------------------------------------------
-------------------------S---------S------------------------------S-------------
---------------------------S-----------------------S----S--------S-SS--SSS--S--S
-----------------------------S--SSS-SS-SSSSSS------------S-S--------------------
-S-------SSS-----------------S--------------------------------------------------
--------S-----------------------------------------------------------------------
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>forward_875
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--------------------------------------------------------GATGAGGACGGAGGCGAAA-----
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>reverse_2140
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-----------------------------------------------------------CACTGGAGCTGAAGCAAAGC-
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