>input_sequence_77092
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------------------------------------------ATGG---------CCTCCTCCACTTGTACTCGAGCCCA
GCTGGCCATCGCCCTCCTCGCCGTCGCGCTGTGCAATGCGGCGTTCCTCGTCGTCGTGGTGGACGCCGGCTACCCCCGCG
GCGGCGGCGGGGACTACAGGGCGCAGTTCCTGTTCCAGCAGAACGCGGCGCGGGCGGCGATGGGGCTGCCGGCGCTGAGG
TGGGACGAGCGGGTGGCGGCGTACGCGCGGTCGTACGCCGAGTCGCGGCGCGGGGACTGCGCGCTGGTGCACTCGTCGGG
GCCCTACGGCGAGAACCTCTTCTGGGGCAGCGGCACCGGCTGGGCGCCCGCGCAGGCCGTGGGGGCGTGGCTGGCGGAGC
GGCCCCGGTACGACTACTGGAGCAACCGCTGCAGCGGCGGCATGTGCGGGCACTACACGCAGATCGTGTGGCGCGGCAGC
ACCCGCGTGGGGTGCGCCATGGTCGAGTGCTACGGCGGCCGCGGCACCTTCATCACCTGCAACTACGACCCGCCCGGCAA
CTACGTCGGCATGCGCCCCTACTGA-------------------------------------------------------
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>chr6B_1_TraesCS6B01G377800
CGGCGCGCGTGCGACCGGCCGAGTCGTTAGCCGGTCGACCGGCCGCAAGCATTTCCCTAATCTCGATGCAGAAAAATCGC
GAGACAACATA-GGTAGAAATGCTAGTGCTTTCTACCCTCATCTATAGGCAAGATTATCACTGCAAACTACTCCCTCCGT
TTCATAATATAAAAACGTTTTTGACAGTACACTCTTATATTATGGCGTTTTTTTACAGTACACTCTTATATTATGGGATG
GAGGGAGTAACCTGTTTAGTTTCGCACAGCGCTTCCTGAAGAGCCGACTATCACTGTGTTGGCAAGGCAGCCAATCTGAG
TTGTAAAGGGCACCTTTTGGCGGAGCTCGACAGTGTGCT-----------------------------------------
----GCATGCCATTCCCTGTTGATTCATGCGGCGCGTCATGACGTGCCGATGCCACGATGCGCGCCTTTCTGCCTCTTTC
TGTCTGAGCGACCACCCTCGCCAATTGAATGGCACTCCGTGATGAACACAGCTGTTCCATCATGCCATTTACCAGTGCCT
ACCATTATCTAGAGAATT----------TTTCTGAATAATCTCCAAAATCATTTGTGTACATGCTCTAGTGCTCTAGTTA
GCAAATTAACCGAAGCGGATGAACAGTTGAACTATTAATTCAGAGACAAGATGCC---AATTACTACTTGGAAACGACGG
GCCAAGGCACGTCTGATCAACGTGCTCAATGCGCACTCTGACCAGCCTACAACGAACGAGCTAATCAATCAGTAGCAATT
TGATTCCAAATC---GGAGCACTAATAATTCAGTAAGCACCGCCCGGAACAGAGCA---GCTGCTGCTAATTTGATTCCA
GTTGATTTTCATTTTAGGTAGACCTTCCTTCCAGTTCCAGAGCGCGCAATCATGGCGGAACATGGCCTCGCCTCCCCAAC
GACACATCTTAAAAATATTCTGACAAGATTTCCTGCCCTCCCTC--------CGAGCCTCCATATAT----ACCAACCTC
CCGTCCGTAAGCAGAGCAG-----CATCACCACCCACCTCCCATGG---------CCTCCTCCACTTGTACTCGAGCCCA
GCTGGCCATCGCCCTCCTCGCCGTCGCGCTGTGCAATGCGGCGTTCCTCGTCGTCGTGGTGGACGCCGGCTACCCCCGCG
GCGGCGGCGGGGACTACAGGGCGCAGTTCCTGTTCCAGCAGAACGCGGCGCGGGCGGCGATGGGGCTGCCGGCGCTGAGG
TGGGACGAGCGGGTGGCGGCGTACGCGCGGTCGTACGCCGAGTCGCGGCGCGGGGACTGCGCGCTGGTGCACTCGTCGGG
GCCCTACGGCGAGAACCTCTTCTGGGGCAGCGGCACCGGCTGGGCGCCCGCGCAGGCCGTGGGGGCGTGGCTGGCGGAGC
GGCCCCGGTACGACTACTGGAGCAACCGCTGCAGCGGCGGCATGTGCGGGCACTACACGCAGATCGTGTGGCGCGGCAGC
ACCCGCGTGGGGTGCGCCATGGTCGAGTGCTACGGCGGCCGCGGCACCTTCATCACCTGCAACTACGACCCGCCCGGCAA
CTACGTCGGCATGCGCCCCTACTGAATACTGATGGC-------------CGGCCGCCGTCGC---GCGTTGCCGCTCCGC
CTCGCCGGTCTTCG------TCGCAGCTCCGTTGCCGGCCGGCCAGCGCGGAC-GGCGATGCGGCGCGGCGTAGCACTAT
CTTGATGTCCCATTGATTGTTGCTCATCGAGAGTTCAAGACAAATCGATGGCGATGCCACGAGTGTACAAAGTATTTTTT
--ACTGCTATATACTACTGGTGCTGCATAT----TATTTATAGAGGGTGTTTGTTTTCAGGAACTTATTGACTTATAGAC
TTAAAAATGTCCCTATAAGTCTCATCTAAACCAAACAGGATGGATTTATAGGGACTTAATGTGCGCATTTGGGATTTATG
GAATAAGACTTTCAAGGAGGGACTTATAGGGACTTATAGTTGTAATATGGTCTTAAAGGGACTTATAAGTCCTAGAAACC
AAACGGGTAGGGGCTTTTTAAAGACTTGGGACTTATAATTTGAGACTACAAAAAATCCTAGGAGTTATGAACCAAACAGG
GCCATATACTCCTGTTGTGGTTACAAAACATAATGTGAAATGAATCGTGAGCTATGTATTTGGCTGCTCTG--TCAAATA
AATAAAAGGCATTCCTCCCTTTTTCGCTTATTGGCGTCTCGATTGTACTCGTATGCTTGTAAAAATGACAGCATTTTTCT
CAAAAAAAAAACAAAAGAGAAAGAGAAGAAGACAGCATTTGCAAAGGAGAATGGTGAGCTGCTCACCCAAAAAGTCT---
--------GTGGCTTTTAGGTGGCTGGAT--------TCCTGCTCAGGAGCTGTAGAAGTGAGCTGTGTACGTGAGCG--
---TGCATAGTCGAGGCTGGCTGGC----GCATGTGCCACCTTGCGAGGATGGATTGGAGGGCGACGGTCGACACAGCCT
GGGCCTCCTGCTCTG-----CCCTCCCAGGTCCAGGCGTGCGATGCGTCATGGGCAGGGGCAGCAGTTGGAATCCGATGC
TGTGCC---GTGCGGCCCCGG--CTCCTTCAATTCCCCTCCCAACTCCGCGGTG
>chr6D_57
--------------------------------------------------------CTAATTTCAATGCAGAAAAATCAC
GAGATAGCGTAGGGTACAAATGCTAGAGCTGTCTACCCACGTCTATATGCAAGATTATCAGTCCAAACTACTCCCTTGGT
TTTATAATATAAGAGAGTTTTTAACGGTACACTCTTATATTATGGCGTTTTTG-ACAGTACACAGTTATATTATGGGACG
GAGGGAGTAACCTTTTTAGTTTCGGACAGCGCTTCCAGAAGAGCCGACTATCACTGTGTTGGCAAGGCAGCAAATCTGAG
TTGTAAAGGGCGCCTTTTGGT-GAGCTTGACAGTGTGCTACTCCCTCCGTTTGAAATTCTTTGTCGCGGAAATGGATGTA
TCTAGCATGCCATTCCCTGTTGATTCATGTGGCGCGTCATGACGTGCCGATGCCACGATGCGCGTCTTTCTGCCTCTTTA
TGTCTGAACGACCACCCTGGCCAATTGAATGACATTCCGTGATAAACACAGCTGTTCCATCATGCCAGTGTC--------
--------CCAGAGTTCGATCAACAAAATTTCTGAATCATCTCCAAAAGCATTTGTCTGCATGCTCTA--------GTTA
GCAACTTAACTGAAGCGGATGAGCAATTTAACGGTGAATTCAGAGACAGGATGTCAAT------TACTTGGAAAAGACGG
GCCAAGGCAGGTTTGATCAACGTGCTCAATGCACATTCTGACCAGCCTACAACGAACGAACTAATCAGTTAGCAGCAATT
TGATTCCAGTGGAGTGGAGCACTAATAATTCAATAAGCACCGCCCGGAAAAGAGCCGCTGCTGCTGCTAATTTGATTCCA
GTTGATTTTCATTTTAGGTAGACCTTCCTTCCAGTTCCAGAGCGCGCAATCATGGCGGAACATGGCCTCGCCTCCCCAAC
GACACATCTTAAAAATATTCTGACAAGATTTCTTGCCCTCCCTCCCTCCCTCCAAGCCTCCATATATATCAACCAACCTC
CCGTCCGTAAGCAGAGCAG---AGCAGCACCACCCACCTCCAATGGCCCCCTCCTCCTCCTCCACTTGTACCCGAGCCCA
GCTGGCCATCGCCCTCATCGCCGCCGCGCTGTGCAATGCGGCCCTCCTCGTCGTGGTC---GACGCCGGCTACCCCC---
---GCGGCGGGGACTACCGGGCGCAGTTCCTGTTCCAGCAGAACGCGGCGCGGGCGGCGATGGGGCTGCCGGCGCTGAGG
TGGGACGAGCGGGTGGCGGCGTACGCGCGGTCGTACGCCGAGTCGCGGCGCGGGGACTGCGCGCTGGTGCACTCGTCCGG
GCCCTACGGCGAGAACCTCTTCTGGGGCAGCGGCACGGGCTGGGCGCCGGCGCAGGCCGTGGGGGCGTGGCTGGCGGAGC
GGCCCCGGTACGACTACTGGAGCAACCGCTGCAGCGGCGGCATGTGCGGGCACTACACGCAGATCGTGTGGCGCGGCAGC
ACCCGCGTGGGGTGCGCCATGGTCGAGTGCTACGCCGGCCGCGGCACCTTCATCACCTGCAACTACGACCCGCCCGGCAA
CTACGTCGGCATGCGCCCATACTGAATACCGATGG----CCGGCCGGTGCAGCCGCCGTCGC---ACGTTGCCGCTCCGC
CTCGCCGGTCTTCTTCACATTCACAGCCCCGTTGCCGGCCGGCCAGCGCGTGC-GGCGATGCGGCGCGGCGTAGCACTAT
CTTGCTGTCCCATTCATTGTTGCTCATCGAGAGTTCAAGACGAATCGATGGCGATGCCACGAGTGTACAAAATATTTTTT
--ACTGC--TATACTACTGGTACTGCATTCTAAGTATTTATCCTTGCCAAA--AT-------------------------
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---ATATACTCCCGTTGTGGTTACGAAACATAATCTGAAATGAATCGTGAGCTACGTATTTGACTGCTCTGTCTCAAATA
AAAAAAAGGCATTCCTCCCTTTGCTC----TTGGCGTCTCGATTGTACTCGTATGCTTGTAAAAATGACAACATTGTTCT
CAAAC------------AGAAGAAGAAGAAGACAGCA-----------------TGAGCTGCTGAGGCAAAAAAGTCCAC
TTTTTGGGGTGGCTTTTAGGTGGCTGGATGGATTCCTTCCTGCTGAGGAGCTGTAGAAGTGAGCTGTGTACGTGAGCATG
CAATGCATAGTCGAGGCTGGCTGGCTAGCGCATGTGCCACCTTGCGAGGATGGATTGGAGGGCGACGGTCGACAGAGCCT
GGGCCTCCTGCTCTG-----CTCTCCCAGGTCCAGGCGTGCGATGCGTCATGGGCAGGGGCAGCAGTTGGAATCCGATGC
TGCGGTCCGGTGCGGCCCCGCGCCTCCTTCAATTCCCCTCC-AACTCCGCGGTG
>chr6A_392
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-------------------------------------CATGGCATGCCGATGCCACGATGCGCGCCTTTCGGCCTCTTTC
TTTCTGAGCGACCACCCTGGCCAATTGAATGGCGTTCCGTGATAAACACAGCTGGCCCACCATGCCATTTACCAGTGCCT
ACCATCATCCAGAGTTCCTGTGATACAGAGA-------------------ATTTGTGTAGATGCTCTA--------GTTA
GGAACTTAACAGAAGCGAATGAACAGTTGAACTATATATTCAGAGACAAGATGTTACTAATTAGTACTCGGAAAAGGCGG
GCCAAGGCACGTCTGATCATCGTGCTCAATGCACATCCTCACCAGCCTACAACGAACGAACTAATCAGTTAGCAGCAATT
TGATTCCAGTGGAG-----CACTAATAATTCAATAAGCACCGCCCGGAACAGAGCCGCT---GCTGCTAATTTGTTTCCG
GTTGATTTTCATTTTAGGTAGACCTTCCTTCCAGTTCCAGAGCGCGCAATCATGGCGGAACATGGCCTCGCCTCCCCAAC
GACGCATCTTAAAAATATTCTGACAAGATTTCCTGCCCTGCCTC--------CAAGCCTCCATATATATCAACCAACCTC
CCGTCCGTAAGCAGAGCAGAGCAGCAGCACCACCCACCTCCAATGG---------CCTCCTCCACTTGTACCCGAGCCCA
GCTGGCCGTCGCCCTCCTGGCCGTCGCGCTGTGCAATGCGGCCCTCCTCGTCGTCGTC---GACGCCGGCTACCCCC---
---GCGGCGGGGACTACCGGGCGCAGTTCCTGTTCCAGCAGAACGCGGCGCGGGCGGCGATGGGGCTGCCGGCGCTGAGG
TGGGACGAGCGGGTGGCGGCGTACGCGCGGTCGTACGCCGAGTCGCGGCGCGGGGACTGCGCGCTGGTGCACTCGTCGGG
GCCATACGGGGAGAACCTCTTCTGGGGGAGCGGCACGGGGTGGGCGCCGGCGCAGGCCGTCGGGGCGTGGCTGGCGGAGC
GGCCCCGGTACGACTACTGGAGCAACCGCTGCAGCGGCGGCATGTGCGGGCACTACACGCAGATCGTGTGGCGCGGCAGC
ACCCGCGTGGGCTGCGCCATGGTCGAGTGCTACGCCGGCCGCGGCACCTTCATCACCTGCAACTACGACCCGCCCGGCAA
CTACGTCGGCATGCGCCCCTACTGAACACCCATGACGGACCGGCCGCTGCGGCCGCCGTCGCGCCGCGTTGCCGCTCCGT
CTCGCCGGCCTTCTTCG------CAGCCCCGTTGCCGGCCGGCCAGCGCGTACGGGCGATGCGGCGCGGCGTAGTAATGT
CTCGCTGTCCCATTCATTGTTGCCCATCGAGAGTTGAAGACGAATCGATGGCGATGCCACGAGTGTACAAAATATTTTTT
TCACTGC--TATACTACTAGTGCTGCATTT----TATTTATCCTTGCCAGAATAT-------------------------
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---ATATACTCCTGTTGTGGTTACGAAACAAAATCTGAAATGAATCCTGAGCTACATATTTGACTGCTC-----------
----------------------------------------GATTATACTCCCATGCTTGTAAAAATGACAGCGTTTTTCT
CAAAA------------AGAAGAAGAAGAAGACAGCAGTTGCAAAGGAGAATGGTGAGCTGCTGAGGCAAAAAAGTCCAC
TTTTCGGCGAGGCTTTTAGGTGGCCGGAT----TCCTTCCTGCTCAGGAGCTGTAGAAGTGAGCTGTGTACGTGAGC---
--ATGCATAGTCGAGGCGGGCTGGC----GCATGTGCCACCTTGCGA-------------------------CAGAGGCT
GGGCCTCCTGCTCTGCTCTGCTCTCCCAGGTCCAGGCGTGCGATGCGTCATGGGCAGGGGCAGCAGTTGGAATCCGATGC
TGCGGTCCGGTGCGGCCCCGG--CTCCTTGAATTCCCCTCC-AACTCCGCGGTG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--S-------------S-
----S-S-S-------S---------S---S-------S-S------S------------S-S-------------SS--
--S---------S-SS------S--S--------------------------SS---------SS-------------S-
-------------S----------S-----------S----------------------------------S--------
-----------S--------SS-----S----------------------------------------------------
-----------------------------S--------------------------------------------------
------------------S---------------S--------S------------------------------------
-----S---S----SSSS-------------------S----------S-------------------SSSSSSSS----
----S-----S------------------------S-----------------S---------S----------S-----
--------------------------------S--S-----------------------S-------S-S--S-------
--------SSSS--------------------S----------------------S------------------------
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-----------------------------------------------------S--------------------------
--------------------------S--------------S-----------------------------S--------
------------------------------------------SS-------------SSSS----------------SSS
SSS--------------S--------------------------------------------------------------
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------------------------------------S-----------S-------------------------------
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----------------------------------S---------------------------------------------
-----------------------------S--------------------------------------------------
-------------S--------S----S----------------------S-----------------------------
----S---------S--------------------------S-----------------------------S--------
-------SS-------------------S------------SSSS-SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS---------------------S---------S-------------------S-------S-----------------
--S-------------------SSSSSSSS--------------------------------------------------
-----SSSSSSSSSSSS----SS--------------S-------------------------S-SS------SSSS---
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------S-----
---------------------S----------------------------------------------------------
--S-SS-----------------------------------S------------
>forward_780
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----------------------------------------ACCAGCCTACAACGAACGAG--------------------
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>reverse_2397
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----------------------------------------------------------------------------TGTG
GCTTTTAGGTGGCTGG----------------------------------------------------------------
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