>input_sequence_77007
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-------------------------------------------ATGTCGAGTCTACTACTCTACTTGTTGACAATTTCCT
CAGAAACGGCAATTTCTTCTCTTTTTTTAGGAAAGAAGAAACTTTTGGGGGCAAAAAATTGCAAGATTTGCCATCTCCTA
CTAGGTAAAGTAACAAAAAACAAACCCCAAGATTTGCCGTTCTGGGACCACATCCTCGGGTACTGGCGCGCGAGCGAGTC
GGGCCCGGAGAACGTGCTCTTCTTGAGGTACGAGGAGCTGCTGCGGGACCCCGCCGAGAACGTCAGAAAGCTCGCGCGGT
TCGTTAGCATGCCGTTCTCCCAGGCGGAGGAGGAGGCCGGCGTCGTCCGCGGCATCGTCGAGCTCTGCAGCCTCGAGAGC
CTGAAGAACCAGGAGGTGAACAGGAATGGGTACATGGACGGCCTCAAGTTCCCTCGCAAGGCCCTCTTCCGGAAGGGCGT
GGCCGGCGACTGGGTGAACCACATGACGCCGGAGATGGCGCGCCGCATGGACGAGATCGTCGCCGACAAGCTCCGCGCCA
CGGGGCTCACATTCCAGTGA------------------------------------------------------------
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>chr7A_1_TraesCS7A01G202100
ATGTTGTTAGTATTCCACTGACAATTTGTAATATATAACTATACACAAACGTGTTCTAATCATTTTAATCTTCTAGCAGA
TTAATTAACCATTCGTTTTTCTCTACTTGATTGA-AGATCTCTTATCTTTTTT-TTCTTCTAAAATCTACTTCCTTTAGG
ATTTAGCAAATGCAATGCAAATGGTGTGAACTTATACACTCTTTTTATGTAAAAAGTTGTAGTTGTTTTTGCATGTTTAT
TAAATGTGTTGCCCTCTAAAATCTATATAATCCTTGCTACTGGCCAAGCTTTTAGCGAATTGTGAAAGATCACTATATTA
CTTAGTTCATTTAATCCCAAAACAGTTGGCTATCTTCCTTGTGATTTAAAAGATTAGGTTCTAGAAGCTGTGAATATT-G
CAAGCATGGATATTTTTAGTGTAGACATGTGAGTGAGCAATCATAATGTCACTAGAAAAAGAAGAAAAATATATTTATAA
TTATACATCAAGCTTGACACATACCTATTTTGCCTTAACTATCAAGAGAAAAGATTATTTGCATCAATTAATCAGTCTCT
TCTATGTTTCAGATTACCAAACACCGGTGGCTTAGTTTAAAGAGGATCACGGAATCTCCATATTGGAGATCAGTGACACC
TAGGCTGGAGAACAACGGACTGTGCAGACATAACTTTCAAGCTGGCCCCGCCATTCTACTTGCACCGGAGGGAGTACATT
ATTCTGGGTTTGGCTGTAATAATACTAAAATTCATGCTAGAATTCTAGGTTTCACTCCGACTTGCACTGTCATGCTAGAA
TTTTAGTATTAAGAAACCTACATACTATTTGATCAAGTCATATTTTAATATTAGATACATCTGTATCTAGATAAATCTAA
AACAAAAAATTTAGAACGGAGAGAGTACATTATTTTGGGTTGGGCTGCAACGCCTTTTCTTAAAATAAACATCAATTATC
TGCGAACATTCGCAAATAGACATGTCATTTACGAACGTTTTAGATGTCGAGTCTACTACTCTACTTGTTGACAATTTCCT
CAGAAACGGCAATTTCTTCTCTTTTTTTAGGAAAGAAGAAACTTTTGGGGGCAAAAAATTGCAAGATTTGCCATCTCCTA
CTAGGTAAAGTAACAAAAAACAAACCCCAAGATTTGCCGTTCTGGGACCACATCCTCGGGTACTGGCGCGCGAGCGAGTC
GGGCCCGGAGAACGTGCTCTTCTTGAGGTACGAGGAGCTGCTGCGGGACCCCGCCGAGAACGTCAGAAAGCTCGCGCGGT
TCGTTAGCATGCCGTTCTCCCAGGCGGAGGAGGAGGCCGGCGTCGTCCGCGGCATCGTCGAGCTCTGCAGCCTCGAGAGC
CTGAAGAACCAGGAGGTGAACAGGAATGGGTACATGGACGGCCTCAAGTTCCCTCGCAAGGCCCTCTTCCGGAAGGGCGT
GGCCGGCGACTGGGTGAACCACATGACGCCGGAGATGGCGCGCCGCATGGACGAGATCGTCGCCGACAAGCTCCGCGCCA
CGGGGCTCACATTCCAGTGAACCCAGAGAAATCA----------------------------------------------
-------------------------------------------------AAATTTCTGCAGTGTCGCGACGAGATCAATT
TTATCATTTCCGTAACTTTATTACTACCCAAATGTTTCAGTTTATCATAAGCAAGCATACACGATCACGCTTCCGCATCA
CACG-------------------------------------------------------ATATTCATCAGATTACTTG-A
TTCAGATCACAACTTCACAAGTGAAACGCACACCGCTCGTATACACACCG--ACAGCGCAGTGACAGTATTCCTGAACCC
AGTC----CATGGCGGCCTCACAGCTTGCTGGAGACCGCGATGGGCCTGGTCCGGGGCCGTGCCGGAGCGGGCTCCTTGG
GCACGACGACGGTGAGCACGCCGTTGTCGACGCTGGCCCTGATCTGCTCCACCCTGACGTGCTCCGGCAGCGCCACCTCC
CGCGCGAACTCCGGCTTCCCGCGCTCCGCCACGTGCCACACTGCCTCTTCCTCGTTTCCCTCCTTCCCCTTCTCCTTCGC
CGCGCCCCTGACGCTGAGCACGTTGCCGTCCTCCACCTGGACCTTGACGTCGTCCTTGCCCAGCCCCGGGACGTTGATCC
GGAGGACGTGGGAGGTCGGGGTCTCCACCCAGTCCATGGCCGCCGTGGCGTAGGCCAAGGGGCGGGCGTAGAGGAGCCGC
CGGAAGGGGCTTCCCCCGAAGAAGAGGTCCGCCATTGATTGGAACGGGAGAGCTAGCTCGGATGGGATCGGCTGGGACTG
CAG--------TTGAGAATCGCACGGTTGGGAATTGGTGTTGGGGTCTCGGCGTCGGCGAGGTGGGAAAAATGGCGAAGG
GGCTGGAACGATGGGGGCAATAAATCAGGAAGGGTTTGCGGCGTCGACGTCAGAGCGATGGTTCGAGAGGCACGGAGACG
GT--------------------GTAGTAGATGGGAGAAGCTTCTGGAGTATGTATGTATGGGTAAAGCTTCGATTTTTTT
TAAAACTATGTTATTTTTTTAGCAATTTCGGAAACTATAGGACGTAATGCAAAAAAACCAAAACTAGTAGCCCGTCGGCC
ATTCT
>chr1B_2
-TGTTGTTAGTATTCCACTGACAATTTGTAATATA--ACTATACACAAACGTGTCCTAATCATTTTACTCTTCTAGCAGA
TTAATTAACCATTCGTTTTTCTCTACTTTATTGACAGATCTCTTATCTTTTTTCTTCTTCTAAAATCTACTCCCTTTAGG
ATTTAGCAATTGCAATGCAAATGGTGTGAATTTATACACTCTTTTTATGTAAAAAGTTGTAGTTGTTTTTGCACATTTAT
TAAATGTGTTGCCTTCTAAAATCTATATAATCTTTGCTACTGACCAAGCTTTTAGCGAATTGTGAAAGATCACTATATTA
CTCAGTTCATTTAATCACAAAACAGTTGGCTATCTTGTGA-----TTTAAAGGTTCGGTTCTAGATGCAGTGAATATTTG
CAAGCACGGATATTTTTAGTGTAGACATGTGAGTGAGCAATTGTAGTGTCATTAGAAAAAGAAGAAAAATATATTTATAA
TTGTACATCAAGCTTGACACGTACCTATTTTGCCTTAACTATCAAGACAAAAGATTATTTGCATCAATTAATCAGTCTCT
TCTGTGTTTCAGATTACCAAACACCGGTGGCTTAGTTTAAAGAGGATCGCGGAATCTTCATATTGGAGAACA--------
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>chr7B_1153
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-----------------------------------GCCGTTCTGGGACCACATCCTCGGGTACTGGCGCGCCAGCGAGTC
GTGGCCGGAGAACGTGCTCTTCTTGAGGTACGAGAAGCTGCTGCGCGACCCGGCCGGAAACGTGAGAAAGCTCGCGCGGT
TCGTCGGCGTGCCGTTCTCCGAGGCGGAGGAGGAGGCCGGCGTCGTCCGCGGCATCGTCGAGCTCTGCAGCCTCGGGAGC
CTGAGGAGCGTGGAGGTGAACAGGACGGGCTACATGGACGGCCTCAAGTTCCCGCGCAAGGCCCTCTTCCGCAAGGGCGT
GGCCGGCGACTGGGCGAACCACATGACGCCGGAGATGGCGCGCCGCATGGACGATATCGTCGCCGACAAGCTCCGCGCCA
CGGGGCTTACATTCCAGTGAGCTCAGAGAAATCA----------------------------------------------
-------------------------------------------------AAATTTCCGCAGTGTCGCGACGAGATCAATT
TAATCATTTCCGTAACTTTATTACCAGCCAAATGTTTCAGTTTATCATAAGCAAGCATACACGATCACGCTTCCGCGTCA
CACG-------------------------------------------------------ATATTCATCGGATTACTTTAA
TTCAGATCACAACTTCACAAGTGAAACGCACACAGCTCGCATACACAAGCATACACCGCAGTAACAGTACTCCTGAACCC
GGTCGGTTCATGGCGGCCTCACAGCTTGCTGGAGACCGCGATGGGCCTGGTCCGGGGCCGGGCCGGGGCGGGCTCCTTGG
GCACGACGACGGTGAGCTCGCCGTTGTCGACGCTGGCCCTGATCTGCTCCACCCTGACGTGCTCCGGCAGCGCCACCTCC
CGCGCGAACTCCGGCTTCCCGCGCTCCGCCACGTGCCACACCGCCGCCTCCTCGTTTCCCTCGTTTCCCTTCTCCTTGGC
CGCGCCCCTGACGCTGAGCACGTTGCCGTCCTCCACCTGGACCTTGACGTCGTCTTTGCCCAGCCCCGGGACGTTGATCC
TGAGGACGTGGGAGGTCGGGGTCTCCACCCAGTCCATGGCGGCCGTGGCGGAGGCTAAGGGGCGGGCGTAGAGGAGCCGC
CGGAAGGGGCTTCCCCCGAAGAAGAGGTCCGCCATTGACTGGAACGGGAGAGCTAGCTCGGATGGGATCGGCTGCGACTG
CAGTTGAGGTCTTGAGGATCGCACGGTTGGGAATTGCTGTTGCGGTCTCGGCGTCGGCGAGTTGGGAAAAA-GGCGAACG
AACTGGAACGATGGGGGCGATAAATCTGGAAGGGTTTGCGGCGTCGACGTCAGAGCGATT-TTCGAGAGACACGGAGAGA
GAGCGACTCGCTGGATAATGGCGTAGTAGATGGGAGAAGCTTCTGGAGTATGTATG------------------------
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>chr7D_1153
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-----------------------------------GCCGTTCTGGGACCACATCCTCGGGTACCGGCGCGCCAGCGAGTC
GTGGCCGGAGAACGCGCTCTTCTTGAGGTACGAGGAGCTGCTGCGCGACCCCGCCGAGAACGTGAGAAAGCTCGCGCGGT
TCGTCGGGCTGCCGTTCTCGGAGGCGGAGGAGGAGGCCGGCGTCGTCCGCGGCATCGTCGAGCTCTGCAGCCTCGAGAGC
CTGAGGAGCATGGAGGTGAACAGGACGGGCTACATGGACGGCCTCAAGTTCCCTCGCAAGGCCCTCTTCCGGAAGGGCGT
GGCCGGCGACTGGGTGAACCACATGACGCCGGAGATGGCGCGCCGCATGGACGATATCGTCGCCGACAAGCTCCGCGCCA
CGGGTCTCACTTTCCAGTGAGGTCAGAGAAAATTCGTATGTAGGCCGATTTGTCAAGCAAGTTATATTTCAGTGTAGTAA
GTACACCTTAACAAATTTGTCAGAATAAGCAAGCTCAAAATGGTCTTTCAAATTTCTGCATTGCCCCAAGATCAATTCTT
TTGTCATACTCATCAC-TAAGTATTAACCAAATTCCTCAGCTTGTCATACGTCCTCAGCACAGCATCATCACGATTTGTA
TTTGTATTTTACAGTAAAATCATTCACGGCTACTAGTTTATTATTCACAGCTGCTTGGCATATTTATCACATCACAGTAC
AACTTTCACGGTCGATTTACGTTGACACATCACCAACCCCATAAACATACCAGATTTCTATTTTTTGAGCAAATAAACAG
AGTCCGGCG---------TCAGAGCTTGCTGGAGACCGCGATGGGCCTGGTCCGGGGGCGGGCCGGAGCGGGCTCCTTGG
GCACGACGACGGTGAGCACGCCGTTGTCGACGCTGGCCCTGATCTGCTCCACCCTGACGTGCTCCGGCAGCGCCACCTCC
CGCGCGAACTCCGGCTTCCCGCGCTCCGCCACGTGCCACACCGCCTCCTCCTCGTTCCCCTCCTTTCCCTTCTCCTTGGC
CGCGCCCCTGACGCTGAGTACGTTGCCGTCCTCCACCTGGACCTTGACGTCGTCCTTGCCCAGGCCCGGGACGTTGATGC
GGAGGACATGGGAGGTCGGGGTCTCCACCCAGTCCATGGCGGCCGTGGCGGAGGCGAAGGGGCGGGCGTAGAGTAGCCGC
CGGAAAGGGCTTCCCCCGAAGAAGAGGTCCGCCATTGATTGGAACGTGAGAGCTAGCTCGGATGGGGTCCGCTGGGACTG
CAG--------TTGAGGATCGCACGGTTGGGAATTGGTGCTGCGGTCTCGGCGTCGGCGAGCTGGGAAAAATGGCGAAGG
AACTGGAACGATGGGGCCAATAAATCAGGACGGGTTTGCGGCGTCGACGTCAGAGCGATGGTTCGAGAGGCGCAGAGA--
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>SNPs
S----------------------------------SS-----------------S------------S------------
----------------------------S------------------------------------------S--------
---------S--------------------S------------------------------------------SS-----
-------------S------------------S---------S-------------------------------------
--S-------------S-------------------SSSSSSSSS--S----S--S---------S--S-----------
------S----------------------------------SS--S-----S----------------------------
--S-----------------S--------------------------S--------------------------------
---S--------------------------------------------S--------S-----------S--SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------S--------
-S-S-----------------------------------------S-----------------S----------------
----SS--S-----------S-----------------------------------------------------------
----S--S-SS--------------SS--S--------------------------------------------------
------------------------------------------------------S-------------------------
--------------------S-S---------------------------------------------------------
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--------------------------S-------------------------------------------------S---
-----------------------------------------------------------------------------S--
---------------------------------------S-------SSS-----S------S------S----------
------------------------------------------------------------S-------------------
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-----------------------------------------S-----S-----------------S-----------S--
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----------------------------------------S---------S----S------------------------
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----------------S-------------------------S------------------S------------------
SS----------------------------------------------------------------------------SS
-S------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_791
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---------------------------------------------------TCACTCCGACTTGCACTGTC---------
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>reverse_1880
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---------------------------------------TATACACACCGACAGCGCAG---------------------
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