>input_sequence_76980
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------------------------------------------------------------------------ATGAAGAA
GGATCT------GTGGCA------------GGCGGCGGCGGCGGTGGTGCCGGATCTGTCGCTGGCGTTGGCGCCGGCGA
GCAGCAGCCAAGA------GCGGGACGAGGACCCTGTTCCGATGGCGTGCGTGGACGGCAAGCCGGTGCGGCTGTTCCAG
TGCCTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGGCCGCCTCGA
CGGCCTCCTCTCCGACCCCTACAGCAA---CGACAGCCTGTTCGGAGGCGCCCCCGTCGCGGCGGCGTCCACCGGGCCGT
CGTGCTATTTTG------------------GCACCTCCATCGTCTCGCACGGCGGCGCTGGCGTGGCGGCGGCGCCAACG
GCCGCCGATGCCTGCAGGCCAGAGAGGAGGGGGTTGGGCGGCAGGGCTCCGCGGTTCGCGGAGCACGCGCTGCCCCTGGA
CCCGTATGCTGGAGGCGACGGGGTGGTGGGCTGGCCAAGGGCCTCCGTCGCAA------GCGGC--GCCGGCGAGGCGTT
GGACCTCGAGCTGCGCCTTTAG----------------------------------------------------------
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-----------
>chr4D_1_TraesCS4D01G337600
AGTCACTATACCAGGCCAGGCGATGGTGGACACCGTAATACCGAGTGGGTTCAAAGTGTATCTTTCCATTGCTGGAGGGG
CAAATACCAGTCTTGACATATCTACCACCACG--ACACTTTTCCGGCGTACATGGAAGTCACCTTTATAATTACCTAGTT
TCAGAGTAACATTTGACTAGGAACTCCCTCCACACCCCGGTGATCTCCAACTCTAAAATCATAA-TACTAGTAAGTACGA
GAGTGCTCTTTTGATCCCGAGCACACATGCTCCCTCGTGAACAGTAAAATTCAAAGACATAGGAAAATGTTGATTTTTTT
TGAATTTTTTTGTGATAAATATTGATGAATATTTCAACTACGTACAAAATTTTGTGATGAAATGACATTCGTGGAGGCCA
TGAAAAAAATTGATATT--CCAAATGCTTCGAATAATTGTCTTTTCGAAGCATCGTTCTCTTTTTC-CCAGACCTCCATA
AATGTCATTGAAATTTTGTACGCC----GGTGAAAAATTCATCAATGTTTATCACG---AAAAAAAATCAGAACTTTTGA
TGTTTTTAAATTATTTATCAAATTTTACTATTCATATAGGAGCATATGTGCTC-GTGATAAAAACTCTGTCCCCGAACAT
ATGCATCGGTTCTTGGAATTTTGTTTTGAGCACGCGCCCCACCCACAGTGAGATGCTGGCCTCTT-GTGAACCATAGCCT
AGCATAACTTGACTGCAGTACAGTGGCACCTCTGTTTCCTCTCGCTTGGAAGGATTCGGTAACGTCGTTTGGGGGTGGAA
TGGGGATTCAGAGCATTATTTAAA--CGCATAAAATCGGATCTCATTCTCAGGTCAGCTC---AGTCCATAGCTTTTTAC
TCCT-----TTTCCCATTAGAGAAGCGCCGCCGTTACCATTGCTAGCTATCATCCGCTCGGTAGCCAATATT--CTTGTG
CTGTGCTGTGTAGCACGTGAGACCACAGTAGTACCTGCCTGAGCTAAATTGAAATACATATACC-----TCGATGAAGAA
GGATCT------GTGGCA------------GGCGGCGGCGGCGGTGGTGCCGGATCTGTCGCTGGCGTTGGCGCCGGCGA
GCAGCAGCCAAGA------GCGGGACGAGGACCCTGTTCCGATGGCGTGCGTGGACGGCAAGCCGGTGCGGCTGTTCCAG
TGCCTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGGCCGCCTCGA
CGGCCTCCTCTCCGACCCCTACAGCAA---CGACAGCCTGTTCGGAGGCGCCCCCGTCGCGGCGGCGTCCACCGGGCCGT
CGTGCTATTTTG------------------GCACCTCCATCGTCTCGCACGGCGGCGCTGGCGTGGCGGCGGCGCCAACG
GCCGCCGATGCCTGCAGGCCAGAGAGGAGGGGGTTGGGCGGCAGGGCTCCGCGGTTCGCGGAGCACGCGCTGCCCCTGGA
CCCGTATGCTGGAGGCGACGGGGTGGTGGGCTGGCCAAGGGCCTCCGTCGCAA------GCGGC--GCCGGCGAGGCGTT
GGACCTCGAGCTGCGCCTTTAGCTA----GCGTCGCCTCGCTGGCTGCTGCGCTGCCACTCATATCGCACAGGTAATGTC
ATCTTGGG-----ACGATACCACTTTTCCATCGTCCCAGCGTAAAGCCTGTGCTTCGTGGCGATTAGAAATTCA------
-------------CTGCGGTTTAGGCTGAGATTTCCCGACGATGCTACTGCAGTGCCAGTGATCTTCAACTTGTGTAGCA
ATCTTGACGTACAAAGTGCGTCCAGATGCTGAAGATGGTGGTGAGGGGC-GAAGCATATGCTGGAAGAATTGCAATTGAA
AATACATGGGATTGGGAGGATACAATCTTCAGGCTGTGACATGATCCCAGCCCGCCCTTTCTGGGTTGGAATATGTACAT
GTTTCCTGCTTATTCGTCATTTTCCTTTCTGTGTATTTTGCTGTGACGACCCAACTCTGTTTTTTACGGTTTCAGGCGTC
GTTGGCTAAAAAAGTTTCTCCAGACACGCACTGTATTTATGCTTAGTATCTTTCTCAGAGTCTCCAAAATATGTGCTCTT
AGGACATCTCCAACGCCGTAAATTTCTCCTATATGTCCGGACGTGGTCCCGGACATGATACGGTAAAAGAGCAATCCAAC
GCTAATTGCAAAGTATAGGGCTGGGAGAAGAAAAAGTAGGTAGGGACCATTCATGTGGTGGAATATTTGTGTGTTGGGAG
GAAAGAAAGAAGAGGGGTACTCCCTTCTTCCATCTATATAGGCCTAATGCGTTTTTTGAGGCTAACTTTGACCAAATATT
AGAGCAATAATATATGACATGCAAGTTACACAAAGTATACCATCAAATTCGTATGTGAAAGGAGCTTCCAATGATATAAT
TTTCACATTATACATTTAATGCACTATTAATCTGATCAATAGTCAAAGACGGTCTTAGAAAACGCATTAGACCCTATATA
AATGGAAGGAGGGAGTATCATTGCTCCGGCAAAACTCCCCACGTTTGTCTCCAAAATATCAGAATTTAGATGTCCGGACA
ACTCCGTTGAC
>chr4B_29
----------------------------GACACCGTAATACCGAGTGAGTTCAAAGTGTATCTTTCCATTGCTGGATGGG
CAAATACCAGTCTTGACATATCTACCACCACGACACACTTTTCCGGCGTAGGTGGAAGTCACCTTTATAATTACCTAGTT
TCAGAGTAACATTTGACCAGGAACTCCCTCCACATGCCGGTGATCTCCAACTCCAAAATCATAAATACTAGTAAGTACGA
GAGAGCTCTTTTGATCCCGAGCACATATGCTCCCTCATGTAGAGTAAAATTCAAAGTCATAGTAAAATGTC-ATTTTTTT
TGAATTTTCTTGTGATAAATATTGATGAATATTTCAACTATGTGCAAATTTTTGTGATGAAATGACATTCGTGGAGGCCA
TGAAAAAAATTGATATT--CCAAATGCTTCCAATAATTGTCTTTTCGAAGCATCATTCTCTTTTTTGCCAGACCTCCATA
AATGTCATTGAAATTTTGCACGCGGGTGGGTGAAAAATTCATCAATGTTTATCACG----AAAAAAATCAGAACTTTTGA
TGTTTTTAAATTATTTATTGAATTTTACTATTCATACAGGAGGGTATGTGCTCGGTGATAAAAACTCTGTCCCGAAATAT
ATGCATCGGTTCTTGGAATTTTGTTTTGAGCAAGCGCCCCACCCACAGTGAGATGCTGGCCTCTTTGTGAACCATAGCCT
AGCATAACTT-ACTGCAGTACAGTGGCACCTCTGTTTCCTCTCGCTTGGAAGGATTCGGCAACGTCGTTTGGGGGTGGAA
TGGGGATTCAGAGCATTATTTATATACCCATCAAATCAGATCTCATTCGCACGTGAG-----------------------
--------------------------------------------------------------------------------
---------------------ACCACAGTAGCACCTGCCTGAGCTAAATTGAAATACATATACTTCGATTCGATGGAGAA
GGATCT------GTGGTTCCAGCTGCA------GGCGGCGGAGGCGCTGCAGGATCTGTCGCTGGCGTTGGCGCCGGCGG
GCAGCAGCCAAGACCGGAATCGGGACGAGGGCCTGGTTCCGATGGCGCGCGTGGACGGCAAGCCGGTGCGGCTGTTCCAG
TGCCTCTTCTGCGACAAGACGTTCCT-AAGTCGCAGGCGCTAGGCGGCCACCAGAACGCGCACCGCAAGGGCCGCCTCGA
CGGCCTCCTCTCCGACCCCTACCACAA---CGACGGCCCATTCGGTGGCGCCGCCGTCGCGGCGGCGTCCACAGAGCCGT
CGTACTATTTTG------------------GCACCTCCATCGCCTCGCACGGCGGCGGTGGCGTGGCGGCGGCGCCAACC
GCCGGTGCCTGCAGCAGGCCAGAGAGGAGGGGGTCGGGCGGCGGCGCTCCGCGCTTCGCGGAGCACGCGGTGCCCCTGGA
CCCATACCCTGGACGCGACGGGGTGGTGGGCTGGCCATGGGCCTGCGCCGCAA------GCGGC--GCCGGCGAGGCGTT
GGACCTCGAGCTGCGCCTTTAGCTA----GCGTCGCCTCGCTGGCTGCTGTGCTGCCACTCGTATCGCACAGGTAATGTT
GTCATCTGGGGACACGATACCTCTTTTCCATGGTCCCACCGTAAGCCTATGC----------------------------
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-----------
>chr5A_49
------------------------------------------------GTTCAAAGTATATCTTTCCATTGCAGGAGGGG
TAAAT----------ACATATCTACCACCACAACACACTTTTCCAGCGTGCGTGGAAGTCACCTGTATAATTACCTAGTT
TCAAAGTAACATTTGACCAGGAACTCCCTCCACATGCCGGTGATCTCTGACTCCAAAATCATAA-TACTAGTAAGTACGA
GAGTGCTCTTTTGATCCCGAGCACACATGCTCCCTCGTGTACAATAAAATTCAAATACATAGTAAAATGTC-GAATTTTT
TTAATTTTCTTGTGATA----------AATATTTCAACTATGTGCAAAATTTTCTGATGAAATGACATTCGTGGAGGCCA
TGAAAAAAACTAATATT--C-AAATGCTTCCAATAATTGTCTTTCCCAAGCATTGTTCTCTATTCTGCCAGACCTCCATA
AATGTCATTGAAATTTTGTACGG----GGGTGAAAAATTCATCAATGTTTATCAC---AAAAAAAAATCAGAACTTTTGT
TGTTTTTAAATCATTTATTGAATTTTACTATTCATATAGGAGCATATGTGCCCAG-GATAAAAACTCTGTCCCGGAACAT
ATGCATCGGTTCTTGGAATTTTGTTTTGAGCACGTGCTCCACCCAAAGTGAGATGC------------------------
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-----------
>chr5A_96
--------------------------------------------------------------------------------
---------------ACATATCTACCACCACAACACACTTTTCCGGCGTGCGTGGAAGTCACCTGTATAATTACCTAGTT
TCAAAGTAACATTTGACCAGGAACTCCCTCCACATGCCGGTGATCTCTGACTCCAAAATCATAA-TACTAGTAAGTACGA
GAGTGCTCTTTTGATCCCGAGCACACATGCTCCCTCGTGTACAATAAAATTCAAATACATAGTAAAATGTC-GA-TTTTT
TTAATTTTCTTGTGATA----------AATATTTCAACTATGTGCAAAATTTTCTGATGAAATGACATTCGTGGAGGCCA
TGAAAAAAAACTGATATTCC-AAATGCTTCCAATAATTGTCTTTCCCAAGCATTGTGCTCTATTCTGCCAGACCTCCATA
AATGTCATTGAAATTTTGTATGC----GGGTGAAAAATTCATCAATGTTTATCAC---AAAAAAA--TCAGAACTTTTGT
TGTTTTTAAATCATTTATTGAATTTTACTATTCATATAGGAGCATATGTGCCCGG-GATAAAAACTCTGTCCCGGAACAT
ATGCATCGGTTCTTGGAATTTTGTTTTGAGCACGTGCTCCACCCAAAGTGAGATGCT-----------------------
--------------------------------------------------------------------------------
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-----------
>chr5A_96
--------------------------------------------------------------------------------
---------------ACATATCTACCACCACAACACACTTTTCCGGCGTGCGTGGAAGTCATCTGTATAATTACCTAGTT
TCAAAGTAACATTTGACCAGGAACTCCCTCCACATGCCGGTGATCTCTGACTCCAAAATCATAA-TACTAGTAAGTACGA
GAGTGCTCTTTTGATCCCGAGCACACATGCTCCCTCGTGTACAATAAAATTCAAATACATAGTAAAATGTC-GA-TTTTT
TTAATTTTCTTGTGATA----------AATATTTCAACTATGTGCAAAATTTTCTGATGAAATGACATTCGTGGAGGCCA
TGAAAAAAAACTGATATTCC-AAATGCTTCCAATAATTGTCTTTCCCAAGCATTGTGCTCTATTCTGCCAGACCTCCATA
AATGTCATTGAAATTTTGTATGC----GGGTGAAAAATTCATCAATGTTTATCACAAAAAAAAAA--TCAGAACTTTTGT
TGTTTTTAAATCATTTATTGAATTTTACTATTCATATAGGAGCATATGTGCCCGG-GATAAAAACTCTGTCCCGGAACAT
ATGCATCGGTTCTTGGAATTTTGTTTTGAGCACGTGCTCCACCCAAAGTGAGATGCT-----------------------
--------------------------------------------------------------------------------
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>chrUn_790
--------------------------------------------------------------------------------
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----GATTCAGAGCATTATTTATA--CCCATCAAATCGGATCTCATTCTCAGGTCAGCGC---AGTCCATAGCA---TAC
TCCT-----TTTTCCATTAGAGAAGCGTCGCCGTTACCATTCCTAGCTATCATCCGCTCGGTAGCCAATATTTTCTTGTG
TTGTGCAGTACGACGAGCG--ACTACTGTAGCACCTGCCTGAGCTAAATTGAAATACATATACTTCGATTCGATGGGGAA
GGATCT------GTGGTTCCACGTGCA------GGCGGCGGCGGCGGTGCCGGAGCTGTCGCTGGCGTTGGCGCCGGCGG
GCAGCAGCCAAGACCGGGAGCGGGACGAAAAACCGGTTCCGATGGCGTGCGTGGACGGCAAGCCGGTGCAGCTGTTCCAG
TGCCTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGGCCGCCTCGA
CGGCCTCCTCTCCGACCCCTACAGCAA---CGACAGCCCATTCGGAGGCACCGCCATCGCGGCGGCGTCCACCGGGTCGT
CGCGCTATTTTG------------------GCACGTTCATCGTCTCACACGACGGCGCTGGCGTGGCGGCGGCGCCAACC
GTCGATGCCCGCT---GGCCAGAGAGGAGGGGGTTGGGCGGCAGGGCTCCGCGGTTCGCGGAGCAGGCGCTGCCCCTGGA
CCCGTATGCTGGAGGCGACGGCGTGGTGGGCCGGCCAAGGGCCTCCATCGCAA------GCGGC--GCCGGCGAGGCGTT
GGACCTCGAGCTGCGCCTTTAGCTA----GCGTCGCCTTGCTGGCTGCTGTGCTGCCGCTCATATCGCACAGGTAATGCC
ATCTTGGG-----ACGATACCTCTTTTCCATCGTCCCAGCGTAAGAT-TGTGCTTCGTGGGGAACATATGTGTGCTAGGC
GATTAGTAATGCGCTGCGGTTTAGGCTGAGATTTCCCGACGATCCTACTG------CAGTGATCTTCAACTTGTGTAGCA
ATCTTGACGTACAAAGTGCGTCCAGATGCTGAAGATGGTGGTGAGGGGGGGAAGCATATGC-------------------
--------------------------------------------------------------------------------
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>chr5A_790
--------------------------------------------------------------------------------
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----GATTCAGAGCATTATTTATA--CCCATCAAATCGGATCTCATTCTCAGGTCAGCGC---AGTCCATAGCA---TAC
TCCT-----TTTTCCATTAGAGAAGCGTCGCCGTTACCATTCCTAGCTATCATCCGCTCGGTAGCCAATATTTTCTTGTG
TTGTGCAGTACGACGAGCG--ACTACTGTAGCACCTGCCTGAGCTAAATTGAAATACATATACTTCGATTCGATGGGGAA
GGATCT------GTGGTTCCACGTGCA------GGCGGCGGCGGCGGTGCCGGAGCTGTCGCTGGCGTTGGCGCCGGCGG
GCAGCAGCCAAGACCGGGAGCGGGACGAAAAACCGGTTCCGATGGCGTGCGTGGACGGCAAGCCGGTGCAGCTGTTCCAG
TGCCTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGGCCGCCTCGA
CGGCCTCCTCTCCGACCCCTACAGCAA---CGACAGCCCATTCGGAGGCACCGCCATCGCGGCGGCGTCCACCGGGTCGT
CGCGCTATTTTG------------------GCACGTTCATCGTCTCACACGACGGCGCTGGCGTGGCGGCGGCGCCAACC
GTCGATGCCCGCT---GGCCAGAGAGGAGGGGGTTGGGCGGCAGGGCTCCGCGGTTCGCGGAGCAGGCGCTGCCCCTGGA
CCCGTATGCTGGAGGCGACGGCGTGGTGGGCCGGCCAAGGGCCTCCATCGCAA------GCGGC--GCCGGCGAGGCGTT
GGACCTCGAGCTGCGCCTTTAGCTA----GCGTCGCCTTGCTGGCTGCTGTGCTGCCGCTCATATCGCACAGGTAATGCC
ATCTTGGG-----ACGATACCTCTTTTCCATCGTCCCAGCGTAAGAT-TGTGCTTCGTGGGGAACATATGTGTGCTAGGC
GATTAGTAATGCGCTGCGGTTTAGGCTGAGATTTCCCGACGATCCTACTG------CAGTGATCTTCAACTTGTGTAGCA
ATCTTGACGTACAAAGTGCGTCCAGATGCTGAAGATGGTGGTGAGGGGGGGAAGCATATGC-------------------
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>chr5A_790
--------------------------------------------------------------------------------
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----GATTCAGAGCATTATTTATA--CCCATCAAATCGGATCTCATTCTCAGGTCAGCGC---AGTCCATAGCA---TAC
TCCT-----TTTTCCATTAGAGAAGCGTCGCCGTTACCATTCCTAGCTATCATCCGCTCGGTAGCCAATATTTTCTTGTG
TTGTGCAGTACGACGAGCG--ACTACTGTAGCACCTGCCTGAGCTAAATTGAAATACATATACTTCGATTCGATGGGGAA
GGATCT------GTGGTTCCACGTGCA------GGCGGCGGCGGCGGTGCCGGAGCTGTCGCTGGCGTTGGCGCCGGCGG
GCAGCAGCCAAGACCGGGAGCGGGACGAAAAACCGGTTCCGATGGCGTGCGTGGACGGCAAGCCGGTGCAGCTGTTCCAG
TGCCTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGGCCGCCTCGA
CGGCCTCCTCTCCGACCCCTACAGCAA---CGACAGCCCATTCGGAGGCACCGCCATCGCGGCGGCGTCCACCGGGTCGT
CGCGCTATTTTG------------------GCACGTTCATCGTCTCACACGACGGCGCTGGCGTGGCGGCGGCGCCAACC
GTCGATGCCCGCT---GGCCAGAGAGGAGGGGGTTGGGCGGCAGGGCTCCGCGGTTCGCGGAGCAGGCGCTGCCCCTGGA
CCCGTATGCTGGAGGCGACGGCGTGGTGGGCCGGCCAAGGGCCTCCATCGCAA------GCGGC--GCCGGCGAGGCGTT
GGACCTCGAGCTGCGCCTTTAGCTA----GCGTCGCCTTGCTGGCTGCTGTGCTGCCGCTCATATCGCACAGGTAATGCC
ATCTTGGG-----ACGATACCTCTTTTCCATCGTCCCAGCGTAAGAT-TGTGCTTCGTGGGGAACATATGTGTGCTAGGC
GATTAGTAATGCGCTGCGGTTTAGGCTGAGATTTCCCGACGATCCTACTG------CAGTGATCTTCAACTTGTGTAGCA
ATCTTGACGTACAAAGTGCGTCCAGATGCTGAAGATGGTGGTGAGGGGGGGAAGCATATGC-------------------
--------------------------------------------------------------------------------
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-----------
>chr5A_823
--------------------------------------------------------------------------------
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---------------------------------------ATCTCATTATAAGGTAGTAGGTCGAGTCCATAGCTTGTTTC
ACGCTCCTCTTTCCCATTGTAGAGGCGCCGCCGTTACCATTTCTAGCTATCATCAGTTCTCTCGCCAATATC--CTTGTG
TTGTGTTGTTGTGCTCCTGACACTGCAACAGCGGCTACCTGAGCTCAACTGT--------TACC-----TTGATGGAGAA
GACCACGTCGTCGTGGTTCCATGTGCAAGCGGCAGCGGCGGCGGCCTCGCCGGATCTGTCGCTGACGATGTCCCCAGCGG
ACAGCAGCCAAGACCGGAA------CGAGGAGGTGGCACCGACGGCGCGCGTGGACGGCAGGACGGTGCGGCTGTTCCAG
TGCCTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCCCACCGCAAGGACCGCCTCGC
CGGCTTCCTCTGCGACCCCTACAACAA---GGACAGCCCATTCGGGGGCGCCGCCGTCGAGGGGACTTCCACCGGGACGA
CCTGCGATTCAAGCGCCGGCCGGTCCATGTGCACTTCCGTGGTCTCGC---ACGGTGGTGGCGTGGAGGCGGCGCCAGCC
TCCCATGCCTGCA---AGCCAGAGAGGTGGGGGCGAGCCGGTGGCGCTCCACGCTTGGCGGAGCACACGCTGCTCCAGGA
CCCGTTCCCTGGCCGCGACGGCGTGGCGGGCTGGTCAAGGGCCTCCGATGCAA------GTGGC--GCCGGCGAGGCTCT
GGACCTGGAGCTGCGCCTCTAGC---------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>chr4D_844
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------AGTCCATAGCTTGTTTC
ATACTCCTCTTTCCCATTGTAGAGGCGCCGCCGTTACCATTTCTAACTATCATCAGTTCTGTCGCCTATATC--CTTGTG
TTGTGTTGTTGTGCTCCTGACGCTGCAACAGCAGCTACCTGAGCTCAACTGT--------TACC-----TCGATGGAGAA
GGCCACGTCGTCGTGGTTCCATGTGCAAGCGGCAGCGGCGGCGGCGGTGCCGGATCTGTCGCTGGCGTTGTCCTCAGAGG
ACAGCAGCCAAGACCGGGA------CGAGGAGGTTGCACCGACGGCGCGCGTGGACGGCAGGACGGTGCGGCTGTTCCAG
TGCCTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCCCACCGCAAGGACCGCCTCGC
CGGCTTCCTCTGCGACCCCTACAACAGCAACGACAGCCCATCCAGGGGCGCCGCCGTCGCGGGGGCGTCCACCAGGATGA
CCTGCGATTCAAGCGCCGGCCGGTCCATGTGCACTTCCGTCGCCTCGC---ACGGCGGTGGCGTGGAGGCGGCGCCAGCC
TCCGATGCCTGCA---AGCCAGAGAGGTGGGGGCGAGGCGGTGGCGCTCCACGCTTCGCGGAGCACACGCTGCTCCAGGA
CCCGTTCGCTGTCCGCGACGGCATGGCGGGCTGGTCAAGGGCCTCGTTCGCAA------GTGGC--GCCGGCGAGACTCT
GGACCTGGAGCTGCGCCTCTAGC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------
>chr4B_844
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AGTCCATAGCTTGTTTC
ACACTCCTCTTTCCCATTGTAGAGGCGCCGCCGTTACCATTTCTAGCTATCATCAGTTCTCTCGCCAATATC--CTTGTG
TTGTGTTGTTGTGCTCCTGACACTGCAACAGCTGCCACCTGAGCTCAACTGT--------TACC-----TCGATGGAGAA
GGCCACGTCGTCGTGGTTCCATGTGCAAGCGGCAGCGGCGGCGGTGGTGCCGGATCTGTCGCTGGCGTTGTCCTCAGAGG
ACAGCAGCCAAGACCGGGA------CGAGGAGGTTGCACCGACGGCGCGCGTGGACGGCAGGACGGTGCGGCTGTTCCAG
TGCCTGTTCTGCGACAAGACGTTCATCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCCCACCGCAAGGACCGCCTCGC
CGGCTTCCTCTGCGACCCCTACAACAACAACGACAGCCCATCCCGGGGCGCCGCCGTCGCGAGGGCGTCCACCGGGCCGT
CGTGCGATTCAAGCGCCGGCCGGTTCATGTGCACTTCCGTGGCCTCGC---ACGGCGGTGGCGTGGAGGCGGCGCCAGCC
TCCGACGCCTGCA---AGCCTGAGAGGTGGGGGCGAGGCAGTGACGCTCCACGCTTCGCGGAGCACACGCTGCTCCAGGA
CCCGTTCGGTGGCCGCGACGGCATGGCGGGCTGGTCAAGGGCCTCGTTCGCAA------GTGGC--GCCGGCGAGGCTCT
GTACCTGGAGCTGCGCCTCTAG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>chr4D_1017
GGCGG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------CGGCGGCGGCAGCGGAGGACGACCTATTGCTGGCGTTGACGCCGGCGG
GCAGAAGGCTAGACCGGTA------CGACGAGCGAACCCAGACGGTGTGCGTGGACGGCAAGACGGTGCGGCTGTTCCAG
TGCCTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGACCGCCTCGC
CGGAGTCCTCGGCGACCCCTACAACAA---CGACAGCCTGTTGGGAGGT---------------GCCACCACCGGGCCGT
CCTGCGATTCTGTTGCCGGCTGGTCCATGTGCACTTACATCGCCTCGC---ACGGCGGTGCCGCCGCGGTGGCTCCAGCC
ACCGATGACTCCA---GGCAAGAGAGGTGGG---GAGGCGGCCGCGCTCCACGCTTCGCGGAGCCCGCGCCGCTCCTGGA
CCCGTCCACTGGCCGCGACGGCGTGATGGGCCGGTCAAGGGCCTCCGTCCCTAGCGGCGGCGGCAAGGCGGCAAGGCGCC
GGACCTCGAGCTGCACCTCTAGCTATCTAGCGTCGCCGGGCCGGC-----TGCTGCCATTCATATTGCACAGGT------
--------------------------------------------------------------------------------
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-----------
>chr4B_1017
GGCGG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CGGCGGCGGGAGCGGAGGACGACCTATTGCTGGCGTTGACGCCGGCGG
GCAGAAGGCTAGACCGGTA------CGACGAGCAAGCCCAGACGGTGTGCGTGGACGGCAAGACGGTGCGGCTGTTCCAG
TGCCTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTTGGCGGCCACCAGAACGCGCACCGCAAGGACCGCCTCGC
CGGAGTCCTCGGCGACCCCTACAACAA---CGACAGCCTGTTGGGAGGT---------------GCCGCCACCGGGCCGT
CCTGCGATTCTGCTGCCGGCTGGTCCATGTGCACTTACATCGCCTCGC---ACGGCGGTGGCGCCGCGGTGGCTCCAGCC
ACCGATGACTCCA---GGCAAGAGAGGTGGG---GAGGCGGCCGCGCTCCACGCTTCGCAGAGCCCGCGCCGCTCCTGGA
CCCGTCCACTGGCCGCGACGGCGTGATGAGCCGGTCAAGGGCCTCCGTCCCTAGCGGCGGCGGC--GGCGGCGAGGCGCC
GGACCTCGAGCTGCACCTCTAGCTATCTAGCGTCGCCAGGCCGGC-----TGCTGCCATTCATATTGCACAGGT------
--------------------------------------------------------------------------------
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-----------
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S--------------------------------
---------------------------------------------------S----------------------------
-----------------S----------------SS-----------------S--------------------------
---------------------------------------S----------------------S-------SS--------
--------S-------------------------------S--S------------------------------------
------------------------------S----------------------------------S--------------
-----------------------S--------------------------------------------------------
------------------SS-----------------------------------------------------S------
--------------------------------------------------------------------------------
----------S------------------------------------------------S--------------------
----------------------S----S---S--------------------------S----------------S----
-----------------------------------------S--------------------------------------
S--------SSS--S-----S----------S-------------------------------------------S----
----------------SS-------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
-------------------------------------------------------------------------------S
----S---SS----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
---------------------S----------------------SS-S------------S--SS-S-SS-SSS------
-------------------------------------------S------SSSSSS------------------------
------------------------------------------------S------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS
>forward_25
-----CTATACCAGGCCAGGCGATG-------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_1036
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AAGAA
GGATCTGTGGCAGGC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>forward_992
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GCACGTGAGACCACAGTAGT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_2037
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTTGCTGTGACGACCCAACT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
