>input_sequence_76964
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGGAGGTGAGATGATACCATCTTTGGCTAGAGTGGAAG
GAAAATTAAAGGGTCTGCAGCTCTCGGAGGCGGAGAGGAAAGTGGTAAAAATCGG---GGAAAATGCAAACTTCATGACA
GTGGGCAAGCTCCAGGCAGTGGGGAAACTGTTGTCGGATAG-ATCGGCGAAAGCTGAACATCTAGGGAAGACTCTGGCTG
GAGTCTGGTGCCCCTTCTCTGGTTTGGAGTGTAAAGATCTTGGTAAGAACCG---GTTCTTGTTTTCTTTCCGTGAAGAA
AAGGGGAAAAAGACGGCAGTAGATAATGGACCGTGGTTTTTCAATAAAAGCTTGCTAGTGGTGGAAGATTTTGCACCAAA
TAAAACTATAGATGATTACCAATTTAAGATGATACCAATATGGGTTAGGCTATATGGTATTCCAATGGGGATGATGGATA
GAGAAACAGGGGCTCTGATTGGGGAACAAATCGGAGAAGTATTAGATATGGATCTGGATGACAATGGCTTTGCATTTGGG
CAATTTATGAGGATCAAAGTATGA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr3A_1_TraesCS3A01G507000
AACTAGGTTTTCATCAGACTAGCCACAGTGAGGAGTAGCTTCAGTAGTAACATGGGTCCAACTCAGCAAATTTGCATAGG
TGGCAATGATTTAATGATGAAAAAGATGGTTTGAGTAACATAGCTATAGTTACTCATACTATGGGTAACATCACACATAT
ATACCAAGAGAAGATGAGTTTATATCCTAATAAATGAAGTGTTGGATAATACCATACATATCTTACTCCCCACTATAGAG
GTAGTAAAAATGTAATTGTAGCCAGTCCGTCCACACGTGACGGTGTCTGTGCCGCTTCTGGCGAGTTCGTGGCCTTTCCA
CCGTGCTCCTGTCCGGCAAGCCTCGCCGCTCAAATCTAAGCCCAAAATCCACAAAACCCACATTCTTGCTCCCGTTTTTT
CTGCGATCTAATCGCTGTTCTGCATAATCCACCAATTTTCTCATCAATCTCAACCACTCTAGAGCCGTGAGGGAGATCTT
ACGTGCTGAATCTGAGGCGAGAGAGCTTGAGGCGACAGAGTTTCAAGGGAAGGATTTGTGTCCCCAAAATCCAAAAGAGC
TCTCTGTCATCAGCTTCGAATCAGCAATCCGCCGGAGGTGAGGAGCGATTCAAGCTCTTCCGGCACCAGCAGGAGTTTGT
CGACCGACGCGCCCAGCATCGCCCTACTTCCGCGCGGCCCGAGTCCGTCGCGTCCACTCCGGGCTTGGGCTAGCGCTCCG
TCTGCCGTAGCGTCAGCTCCAGCGACAGCAGAAGCGGCTGCGTCAGCCGTAGCCACTCGTCCAGGAGCGCCTCCTCTGAC
CACGGCGCCACGCCGCCGCGGAGGTCCTGGTCAAGCAGCTTGCTCTACTCGCACCCGAGGCCGTTGCCGCAGTTGCGCTC
GCGACCGAGCTCTGTCGCCAGTTCGTCGAGCTGTCAAACCAATTGGAGAGATGTGTGGTGGCGAAAGACAGAGTAGGTGG
TGTGACGTCCAGCCAGAGGTTGCTGCTATCCGAGGCTACAATGGGAGGTGAGATGATACCATCTTTGGCTAGAGTGGAAG
GAAAATTAAAGGGTCTGCAGCTCTCGGAGGCGGAGAGGAAAGTGGTAAAAATCGG---GGAAAATGCAAACTTCATGACA
GTGGGCAAGCTCCAGGCAGTGGGGAAACTGTTGTCGGATAG-ATCGGCGAAAGCTGAACATCTAGGGAAGACTCTGGCTG
GAGTCTGGTGCCCCTTCTCTGGTTTGGAGTGTAAAGATCTTGGTAAGAACCG---GTTCTTGTTTTCTTTCCGTGAAGAA
AAGGGGAAAAAGACGGCAGTAGATAATGGACCGTGGTTTTTCAATAAAAGCTTGCTAGTGGTGGAAGATTTTGCACCAAA
TAAAACTATAGATGATTACCAATTTAAGATGATACCAATATGGGTTAGGCTATATGGTATTCCAATGGGGATGATGGATA
GAGAAACAGGGGCTCTGATTGGGGAACAAATCGGAGAAGTATTAGATATGGATCTGGATGACAATGGCTTTGCATTTGGG
CAATTTATGAGGATCAAAGTATGAATGGACATCACTGTACCACTGATGAGAGGAATTACCTTCGATGATGATGAGGA---
TGAGCAGAACCAAAAAGATGAAAAAATGGTAAGA---------GGAGAAAATGGAAAAATGGAGGAGCAGAAGAAGATGG
TTTCATTTGAATATGAACATTTACCGGACTTCTGCTACAATTGTGGGATCATTGGTCACGGCGAAAAAGCTTGCATAACG
AGAGCCAGACGAGAAGGAGAGAGGCAATATGGTCCATGGTTGCGTGCAACAATCTACAAAGGGAGCTCCAGTGAAGAGAA
AAGCAGGGGATCAAGTGATAAAGGCGGTTTTTGGAGAAGTAATAGT---------GCAGGAAGTAGCGGTAGTGGGCAGG
GAAGTGATGGCCCATCATGGAGGAAAACTATATCAACTGGGGGAGATGATGACAGGGAAAAAAGAGATGTGAAGGAAGTC
ACAAGCCCTCAAAAATTTATACAAGAGGAGCAAACAGCGACAACAGGGAGTAAAAAGTTGATATTCGCTGTAGACGAACA
TAAAACACAAGCGAAGGCAGAGCAAAATATGACAGAGAAGCGCGCAGAGGAAAAGGAGGAGAACTTGGAGAAAACAGCAA
AAGAGCCAATGAGAGTAGGGTCATCCTCAAGTGACATAGAACCTGATTACACACACCTAAAGCCAGATGTCAAAAAGATG
AGAGGCACTTTCAAACGCAGAGAGAGGCAAGCAGAGGCAAAAACTCAAGAAATGTTGAAGTCACCACTAAAGAAAAGAGG
GGCGGACCTCATGGAGATTGACGGGGAACATGATCTGGCGAAAAAAGTAAGGATGGAGGTTGAGAAAACAGATGGAGTGG
TAGGGAAAGAAGCTCCAAACAAAGATAACTTAGACAAGGAAGCTGGGCTGCCAGGACAGCCCGGCAGGGAAAAATGAAAC
TCATTGCTTGGAACTGCCGGGGATTGGATAACGGCCCGGCAGTCCGAGGGCTTCTGGAGATCCAGAAGCGGGAGGACCCA
GATAT
>chr2B_264
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGTCCGTCCACACGTGACGGTGTCTGTGCCGCTTCTGGCGAGTTCGTGGCCTTTCCA
CCGTGCTCCTGTCCGGCAAGCCTCGCCGCTCAAATCTAAGCCCAAAATCCACAAAACCCACATTCTTGCTCCCGTTTTTT
CTGCGATCTAATCGCTGTTCTGCATAATCCACCAATTCTCTCATCAATCTCAACCACTCTAGAGCCGTGAGAGAGATCTT
ACGTGCTGAATCTGAGGCGAGAGAGCTTGAGGCGACAGAGTTTCAAGGGAAGGATTTGTGTCCCCAAAATCCAAAAGAGC
TCTCTGTCATCAGCTTCGAATCAGCAATCCGCCGGAGGTGAGGAGCGATTCAAGCTCTTCCGGCACCAGCAGGAGTTTGT
CGACCGACGCGCCCAGCATCGCCCTACTTCCGCGCGGCCCGAGTCCGTCGCGTCCACTCCGGGCTTGGGCTAGCGCTCCG
TCTGCCGTAGCGTCAGCTCCAGCGACAGCAGAAGCGGCTGCGTCAGCGGTAGCCACTCGTCCAGGAGCGCCTCCTCTGAC
CACGGCGCCACGCCGCCGCGGAGGTCCTGGTCAAGCAGCTTGCTCTACTCGCACCCGAGGCCGTTGCCGCAGTTGCGCTC
GCGACCGAGCTCTGTCGTCAGTTCGTGGAGCTGTCAAACCAATTGGAGAGAAGTGTGGTGGCGAAAGACAGAGTAGGTGG
TGTGACGTCCAGCCAGAGGTTGCTGCTATCCGAGGCTACAATGGGAGGTGAGATGATACCATCTTTGGCTAGAGTGGAAG
GAAAATTAAAGGGTCTGCAGCTCTCGGAGGCGGAGAGGAAAGTGGTAAAAATCGG---GAAAAATGCAAACTTCATGACA
GTGGGCAAGCTCCAGGCAGTGGGGAAACTGTTGTCGGATAG-ACCGGCGAAAGCCGAACATCTAGGGAAGACTCTGGCTG
GAGTCTGGTGCCCCTTCTTTGGTTTGGAGTGTAAAGATCTTGGTAAGAACCG---GTTCTTGTTTTCTTTCCGTGAAGAA
AAGGGGAAAAAGAAGGCAGTAGATAATGGACCGTGGTTTTTCAATAAAAGCTTGCTAGTGGTGGAAGATTTTGCACCAAA
TAAAACTATAGATGATTACCAATTTAAGATGATACCAATATGGGTTAGGCTATATGGTATTCCAATGGGGATGATGGATA
GAGAAACAGGGGCTCTGATTGGGGAACAAATCGGAGAAGTATTAGATATGGATCTGGATGACAATGGCTTTGCATTTGGG
CAATTTATGAGGATCAAATTACGAATGGACATCACTGTACCACTGATGAGAGGAATTACCTTCGATGATGATGAGGA---
TGAGTAGAACCAAAAAGATGAAAAAATGGTAAGA---------GGAGAAAATGGAAAAATGGAGGAGCAGAAGAAGATGG
TTTCATTTGAATATGAACATTTACCGGACTTCTGCTACAATTGTGGGATCATTGGTCACGGCGGAAAAGCTTGCATAACG
AGAGCCAGACGAGAAGCAGAGAGGCAATATGGTCCATGGTTGCGTGCAACAATCTACAAAGGGAGCTCCAGTGAAGAGAA
AAGCAGGGGATCAAGTGATAAAGGCGGTTTTTGGAGAAGTAACAGT---------GCAGGAAGTAGCGGTAGTGCGCAGG
GAAGTGATGGCCCATCATGGAGGAAAACTATATCAACTGGGGGAGATGATGACAGGGAAAAAAGAGATGTGAAGGAAGTC
ACAAGCCCTAAAAAATTTATACAAGAGGAGCAAACAGCAACAACAGGGAGTAAAAAGTTGATATTCGCTGTAGACGAACA
TAAAACACAAGCGAAGGCAGAGCAGAATATGACAGAGAAGCGCGCAGAGGAAAAGGAGGAGAACTTGGAGAAAACAGCAA
AAGAGCCAATGAGAGTAGGGTCATCCTCAAGTGACATAGAACCTGAGTACACACACCTAAAGCCAGATGTCAAAAAGATG
AGAGGCACTTTCAAACGCAGAGAGAGGCAAGCAGAGGCAAAAACTCAAGAAATGTTGAAGTCACCACTAAAGAAAAGAGG
GGCGGACCTCATGGAGATTGACGGGGAACATGATCTGGCGAAAAAAGTAAGGATGGAGGTTGAGAAAACAGATGGAGTGG
TAAGGAAAGAAGCTCCAAACAAAGATAACTTAGACAAGGAAGCTGGGCTGCCAGGACAGCCCGGCAGGGAAAAATGAAAC
TCATTGCTTGGAACTGCCGGGGATTGGGTAACGGCCCGGCAGTCCGAGGGCTTCTGGAGATCCAGAAGCGGGAGGACCCA
GATAT
>chr6A_276
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CGTGACGGTGTCTGTGCCGCTTCTGGCGAGTTCGTGGCCTTTCCA
CCGTGCTCCTGTCCGGCAAGCCTCGCCGCTCAAATCTAAGCCCAAAATCCACAAAACCCACATTCTTGCTCCCGTTTTTT
CTGCGATCTAATCGCTGTTCTGCATAATCCACCAATTCTCTCATCAATCTCAACCACTCTAGAGCCGTGAGGGAGATCTT
ACGTGCTGAATCTGAGGCGAGAGAGCTTGAGGCGACAGAGTTTCAAGGGAAGGATTTGTGTCCCCAAAATCCAAAAGAGC
TCTCTGTCATCAGCTTCGAATCAGCAATCCGCCGGAGGTGAGGAGCGATTCAAGCTCTTCCGGCACCAGCAGGAGTTTGT
CGACCGACGCGCCCAGCATCGCCCTACTTCCGCGCGGCCCGAGTCCGTCGCGTCCACTCCGGGCTTGGGCTAGCGCTCCG
TCTGCCGTAGCGTCAGCTCCAGCGACAGCAGAAGCGGCTGCGTCAGCCGTAGCCACTCGTCCAGGAGCGCCTCCTCTGAC
CACGGCGCCACGCCGCCGCGGAGGTCCTGGTCAAGCAGCTTGCTCTACTCGCACCCGAGGCCGTTGCCGCAGTTGCGCTC
GCGACCGAGCTCTGTCGTCAGTTCGTCGAGCTGTCAAACCAATTGGAGAGAAGTGTGGTGGCGAAAGACAGAGTAGGTGG
TGTGACGTCCAGCCAGAGGTTGCTGCTATCCGAGGCTACAATGGGAGGTGAGATGATACCATCTTTGGCTAGAGTGGAAG
GAAAATTAAAGGGTCTGCAGCTCTCGGAGGCGGAGAGGAAAGTGGTAAAAATCGG---GAAAAATGCAAACTTCATGACA
GTGGGCAAGCTCCAGGCAGTGGGGAAACTGTTGTCGGATAG-ACCGGCGAAAGCCGAACATCTAGGGAAGACTCTGGCTG
GAGTCTGGTGCCCCTTCTCTGGTTTGGAGTGTAAAGATCTTGGTAAGAACCG---GTTCTTGTTTTCTTTCCGTGAAGAA
AAGGGGAAAAAGAAGGCAGTAGATAATGGACCGTGGTTTTTCAATAAAAGCTTGCTAGTGGTGGAAGATTTTGCACCAAA
TAAAACTATAGATGATTACCAATTTAAGATGATACCAATATGGGTTAGGCTATATGGTATTCCAATGGGGATGATGGATA
GAGAAACAGGGGCTCTGATTGGGGAACAAATCGGAGAAGTATTAGATATGGATCTGGATGACAATGGCTTTGCATTTGGG
CAATTTATGAGGATCAAAGTACGAATGGACATCACTGTACCACTGATGAGAGGAATTACCTTCGATGATGATGAGGA---
TGAGCAGAACCAAAAAGATGAAAAAATGGTAAGA---------GGAGAAAATGGAAAAATGGAGGAGCAGAAGAAGATGG
TTTCATTTGAATATGAACATTTACCGGACTTCTGCTACAATTGTGGGATCATTGGTCACGGCGAAAAAGCTTGCATAACG
AGAGCCAGACGAGAAGGAGAGAGGCAATATGGTCCATGGTTGCGTGCAACAATCTACAAAGGGAGCTCCAGTGAAGAGAA
AAGCAGGGGATCAAGTGATAAAGGCAGTTTTTGGAGAAGTAACAGT---------GCAGGAAGTAGCGGTAGTGGGCAGG
GAAGTGATGGCCCATCATGGAGGAAAACTATATCAACTGGGGGAGATGATGACAGGGAAAAAAGAGATGTGAAGGAAGTC
ACAAGCCCTCAAAAATTTATACAAGAGGAGCAAACAGCGACAACAGGGAGTAAAAAGTTGATATTCGCTGTAGACGAACA
TAAAACACAAGCGAAGGCAGAGCAAAATATGACAGAGAAGCGCGCAGAGGAAAAGGAGGAGAACTTGGAGAAAACAGCAA
AAGAGCCAATGAGAGTAGGGTCATCCTCAAGTGACATAGAACCTGATTACACACACCTAAAGCCAGATGTCAAAAAGATG
AGAGGCACTTTCAAACGCAGAGAGAGGCAAGCAGAGGCAAAAACTCAAGAAATGTTGAAGTCACCACTAAAGAAAAGAGG
GGCGGACCTCATGGAGATTGACGGGGAACATGATCTGGCGAAAAAAGTAAGGATGGAGGTTGAGAAAACAGATGGAGTGG
TAGGGAAAGAAGCTCCAAACAAAGATAACTTAGACAAGGAAGCTGGGCTGCCAGGACAGCCCGGCAGGGAAAAATGAAAC
TCATTGCTTGGAACTGCCGGGGATTGGGTAACGGCCCGGCAGTCCGAGGGCTTCTGGAGATCCAGAAGCGGGAGGACCCA
GATAT
>chr7A_987
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TATCCGAGGCTACAATGGGAGGTGAGATGGTACCATATTTGGCTGGAGTCGAAG
GAAAACTAAAGGGACTGCAGCTGTCGGATGCAGAGAAGAAATGTATTAAACTCGGAAGGAAAAATGCAAGCTCCTT-GCA
ATGGGCAAACTCCAAGCAGTTGGTAAGCTTCTGTCGGACAG-ACCGGCGAAAGCTGAGCATTTAGGGAGGACATTGGCAG
GAATCTGGTGCCCCTTCACAGGACTGGAATGCAAGGATTTTGGTAAGAACCG---TTTTTTATTTTCGTTCCGTGAAGAG
AAAGGCAAAAGGAAGGCAGTAGATAGTGGACCATGGTTTTTCAATAAAAGTTTGCTGGTGATGGAAGATTTTGCAGCTAA
CAAAAGCATTGATGAATACCAATTTAAG-TGATACCAATATGGGTAAGGGCATATGGTATTCCGATGGGGAAGATGGATA
GAGAAACAGGAACTTTAATTGGGGAACAAATTGGAAAAGTTTTGGATATGGATCTAGATGAGAATGGTCTTGCAATAGGG
CAATATATGAGGATCAAAGTACGAATGGACACCACTCTACCACTGATGAGAGGAATTACTTTTGATGACGAGGATGAAGA
GGAGCCGGACAAGAGGAAGGAAACTATGGTAATA---------GAGGAAAAGAAAGATGCAGTA---CAGGAGAGAGTGG
TTTCCTTTGAATATGAACACTTGGCTGACTTCTGTTACAACTGTGGGATCATTGGCCATAGTGAAAAAGTTTGCCCAACC
G-AAAAAAAAGAGAAGGAGGTAGGCAGTATGGTCCATGGCTGTGAGCAGTAATTTACAAGGGGAGTTCCAGTGAAGAGAG
AAATAGAGGACCAAGCGACAAGACTGAATTTTGG---------AGT---------GGGGGAAGCAAAGGTAGTAGGCAAG
GAAGTGATGGTCCGTCATGGAGGAAGACTAGTCCAAGTGCCGGTGATGATTGCAATAAAAAAGGTGTAGAAAAGGAAGCT
GCTAGCCCTCTAAAAATAACCCGAGAGGAGCATATAGAAACAACAGGAGGTAAA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr3B_987
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TATCCGAGGCTACAATGGGAGGTAAGATGGTACCATATTTGGCTGGAGTGGAAG
GAAAACTAAAGGGACTGCAGCTGTCGGATGCAGAGAAGAAATGTATTAAACTCGGGAGGAAAAATGCAAGCTCCTTGGCA
AAGGGCGAACTCCAAGCAGTTGGTAAGCTTCTGTCGGACAG-ACCGGCGAAAGCTGAGCATTTAGGGAGGACATTGCCAG
GAATCTGGTGCCCCTTCACAGGATTGGAGTGCAAGGATCTTGGTAAGAACCG---TTTTTTATTTTCGTTCTGTGAAGAG
AAAGGCAAAAGGAAGGCAGTAGATAGTCGACCATGGTTTTTCAATAAAAGCTTGCTGGTGATGGAAGATTTTGCACCTAA
CAAAACCAATGATGAATACCAATTTAAGATGATACCAATATGGGTAAGGGCATATGGTATTCTGATGGGGAAGATGGATA
GAGAAACAGGAACCTTAATTGGGGAACAAATTGGAAAAGTTTTGGATATGGATCTAGATGAGAATGGTCTTGCAATAGGG
AAATATATGAGGATCAAAGTACGAATGGACACCACTCTACCACTGATGAGAGGAATTACTTTTGACGACGAGGATGAAGA
GGAGCTGGACAAGATGAAGGAAACTATGGTAAGT---------GAGGGAAAGAGAGATGCAGTA---CAGGAGAGAGTGG
TTTCCTTTGAATACGAACACTTGCCTGACTTCTGTTACAACTGTGGGATCATTGGCCATAGTGAAAAAGCTTGCCCAACC
GGAACAAAAAGAGAAGGAGGTAGGCTGTATGGTCCATCGCTGCGAGCAGTAATTTACAAGGGGAGTTCCAGGGAAGAGAG
AAATAGAGGACCAAGCGACAAGAGTGAATTTTGG---------AGT---------GGGGGAAGAAAAGGTAGTAGGCAAG
GAAGTGATGGTCCGTCATGGAGGAAGACTATTCCAAGTGCCGGTGATGATTGCAATAAAAAAGGTGTAGAAAAGGAAGCT
GCTAGCCCTCTAAAAATAACCCGAGAGGAGCA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr3D_987
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------TATCCGAGGCTACAATGGGAGGTGAGATGGTACCATATTTGGCTGGAGTGGAAG
GAAAACTAAAGGGACTGCAGATGTCGGATGCAGAGAAGAAATGTATTAAACTCGGAAGGAAAAATGCAAGCTCCTTGACA
ATGGGCAAGCTCCAAGTAGTTGGTAAGCTTCTGTCAGACAG-GCCGGCGAAAGCTGAGCATTTAGGGAGGACATTGGCAG
GAATCTAGTGCCCCTTCATGGGATTGGAGTGCAAGGGTCTTGGTAAGAACCG---TTTTT-ATTTTTGTTCCATGAATAG
AAAGGCAAAAGGAAGGCAGTAGATAGTGGACCATGGTTTTTCAATAAAAGCTTGTTGGTGATGGGAGATTTTGTACCTAA
CAAAACCATTAATGAATACCAATTTAAGATGATACCAATATGGGTAAGGGCATATGGTATTCCGATGGGCAAGATGGATA
GAGAAACATGAACTTCAATTGGGGAACAAATTGGAAAAGTTTTGGATATGGATCTAGATGAGAATTGTCTTGCAATAGGG
AAATATATGAGGATCAAAGTACGAATAGACACCACTCTACCACTGATGAGAGGAATTACTTTTGATGACGAGGATGAAGA
GGAGCCGGACAAGATGAAGGAAACTATGGTAAGA---------GAGGAAAAGAAAGGGGCAGAA---GAGGAGAGAGTGA
TTTCCTTTGAATACTAACACTTGCCTGACTTCTGTTACAACTGTGGGATCATTGGCCATAGTGAAAAAGCTTGCCCAACT
AGAACAAAAAGAGAAGGAGGTAGGCAGTATGGTCCATGGCTGCGAGCGGTAATTAACAAGGGGAGTTCTAGTGAAGAGAG
AAATAGAGGACTAAGCAACAAGAGTGAATTTTGG---------AGT---------GGGGGAAGCAAAGGTAGTACGCAAG
GAAGTGATGGTCCATCATGGAGGAAGACTATCCCAAGTGTCGGTGATGATTGCAATAAAATAGGTGTAGAAAATGAAGTT
GCTAGCCCTCTAAAAATAACCCGAGAGGAGCATATAGAAACAGCAGGAAGTAAA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr3A_990
CCGATG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GCTACAATGGGAAGTGAAATAGTACAAGCTTTGGTTGGAGTGGAAG
GAAAATTAAAAGGATTGAAGCTCTCAGAGGTAGAGAAGAAAGTGATTAAAATCGGAAAGAAGAGCGGAAATCACTTGACA
GTGGGAAAGCTCCAAGCAGTGGGGAAGTTTTTTTTGGACAGGACAGGCGAAATCTGAACATTTGGGGAGGACATTAGCAG
GAGTCTGGTGCCCCTTCACTGGATTGGAGTGCAAGGATCTTGGTAAGAATTTTTTTTTCTTGTTTTCTTCCCGTGTAGAG
AAGGGGAAAATGACGGCAATAGATAATGGACCATGGTTTCTCAATAAAAGTTTGCTGGTGATGGAAGATTTTGCACCCAA
TAAAACCATAGATGAATATCAATTTAAGACCATACCAATATGGGTATGGGTGTATGGTATTCCGATGGGGATGATGGATA
GAGAAACAAGGGTTTTAATTGGGGAACAGATTGGTGAAGTCTTGGACATGGAGTTGGATGATAATGGTTTTGCATTTGGG
AAATTTATGAGGATCAAAGTAAGAATGGACATCACTGTACCACTGGTGAGAGGGATCACCATTGAGGATGAGGAGGAAGA
TGAGCAGTACTAGAAGAAGGGGA-AATGGGAGAAGGTAGTAATGAAGAAATGGATGAGGAAGAGGAGCAGAAGAAAGTGG
TTTCAGTTGAATACGAACACTTACGAGACTTCTGCTACAATTGTGGGATCATTGGTCATAGTGAAAAAAT---CACAACA
AAAACAAAATGTGGAAAAGGTCGACAGTATGGTCCATGGTTGCGTGCAGCAATCTATAAAGGGAGTTCCAGTGATGTGAA
GAGCAGAGGATCAAGTGATAAGGGTGATCTCTGG---------AAAAGTAACAGCGTGGGAAGCAAGGGCAGTAGGTAGG
GAAAGTGATGG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr2B_994
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GGTTACAATGGGAAGTGAAATACTACAAGCTTTGGGTGGAGTGGAAG
GAAAATTAAAAGGATTGAAGCTCTCAGAGGCAGAGAAGAAAGTGATTAAAATCGGAAAGAAGAGCGGAAATCACTTGAGA
GTGGGAAAGCTCCAAGCAGTGGGGAAGCTTTTGTCGGACAG-ACCGGCGAAATCTGAACATTTGGGGAGGACATTAGCAG
GAGTTTGGTGCCCCTTCTATGGATTGGAGTGCAAGGATCTTGGTAAGAATCG---TTTCTTGTTTTGTTTTCGTGAAGAG
AAGGGAAAAATGAAGGCAGTAGAAAATGGACCATGGTTTTTCAATAAAAGCTTGCTGGTGATGGAAGATTTTGCGCCCAA
TAAAACCATAGATGAATATCAATTTAAGACCATACCGATATGGGTAAGGGTGTATGGTATTTCGATGGGGATGATGGATA
GAGAAACAGGGGTTTTAATTGGGGAACAGATCGGTGAAGTCTTGGATATGGAGGTGGATGATAATGGTTTTGCATTTGGG
CAATTTATGAGGATCAAAGTAAGAATGGACATCACTATACCACTGATGAGAAGGATCACTATTGAGGGTGAGGAGGAAGA
TGAGCAGTACCAGAAGAAGGGATTAATGGGAGAAGGGTGTAATGAAGAAAAGAATGAGGAGGAAGAGCAGAAGAAAGTGG
TTTCATTTGAATACGAACATTTACCAGACTTCTGCTACAATTGTGGGATCATTGGTCACAGTGAAAAAAATTGCACAACG
AAAACAGAACATGAAGGTAGTCGACAGTATGGTCCATGGTTGCGTGCAGCAACCTATAAAGGGAGTTCCAGTGATGAGAA
GAGCAGAGAATCAAGTGAGAAAGGTGATTTCTGT---------AAAGGTAACAACGTGGGAAGCAAGGGCAGTAGGCAGG
GAAGGGTTGGTCCATCATGGAAAGAGATTCCACCAAGCGGGCGAGCTGACAACAGA-AAAAAAGAGATGAGAAGGAAATT
ACAAGCCCCTTAAAAATAACAAATGAAGAGCAAACAAAGACAACAGGGAGTAAAAAACTGGTTTTTGAGGAAGAACAACA
GAACGCTCATGTGAAGGGAGAAGAAAACGGGAAGGATAAGCACATGGAGAATAAGGAGGAGAACCTAGAGGGACCAACAA
AGAAACCAGAAAGAGCGGTCTCGACCTGGGACGACACGGAACCTGAATATGTTTTCCTGAATTTAGGCTTAAAAAAGTTG
AGAAGCACTTTCAAGCGCAGAGAGCGGCAAGAAGGAGTGAAAACTCAAAAACTGTTGGTGCCGCCACCAAAGAAAAGAGG
GGTAGACCTCATGGAGATTGATGAGGAATATGAGTCGGCGAAAAAAGTAAGGATGGAGGAGAAGAAAACAGATGGAGTGC
TAGGAGAAGAAGTCTTTAACAAAGATGATTCAGACAAGGAAGCTGGGCTGCCACGACAGCCCGGCGGGAGAAAATGAAGC
TTATCGCCTGGAACTGCC--------------------------------------------------------------
-----
>SNPs
SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S---------------------------------S----------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
-----
>forward_40
--------------------AGCCACAGTGAGGAGTAGCT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_1164
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TCGGCGAAAGCTGAACATCT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_68
------------------------------------------------AACATGGGTCCAACTCAGCA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_1883
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TAGTGCAGGAAGTAGCGGTAG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
