>input_sequence_76936
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----------------------------------------ATGGTGAAGGGACGCACCGGCCAGCGCGTGAGGCTCTACG
TCCGCGGCACCATCCTCGGATACAAGCGGTGAGCAGCTCCCTCCGCCGCCGCGGCTTCGTTCCTT--------CTCCCTC
GCGTGCGTCT----CTGAGTTCGTGGGGCTTGGTTGGGCGC-----------------------------GCAGGTCCAA
GTCGAACCAGTACGAGACGGCGTCACTGGTGCAGATCGAGGGGGTGAACACCAGGGAGGACGTGGCCTGGTACGGCGGCA
AGAGGATGGCCTACGTCTACAAGGCCAAGACCAAGAGCAACGGCACCCACTACCGCTGCATCTGGGGCAAGGTCTCCCGC
CCCCACGGCAACACCGGCGTCGTCCGCGCCAAGTTCACCTCCAACCTGCCCGCCGAGGCCATGGTGAGTTGCTCGGTCGA
GCTTCTCCGGTTGTCTGTTTTGGTGGCATGCTTGCTACTCTTTGATGTACTGACTTGTGTTGTCT---------------
--GCTGACGGTGCTGTGGTGTTTGCTTTGCTCAGGGGAAAAAGGTCAGGGTCTTCATGTACCCGAGCAGCATCTAA----
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>chr6B_1_TraesCS6B01G376800
TTTCTTTTATTTCCTTCTTGCTTTTCATCGTTTTTCTGTTTCTCTCTCGATTTTCTCTATTTTTCGTTCTGTTGAAGTAG
TTTCTTTAGGTTTTTCATTTTCCTTGTTTTTTCTATTTGGTTTTTATTAGGTTTTCTTCATTTTTTACTTTTCTTATCAT
TTTTCATCTTTTTTTAACACATGTTAACTTTTTTATGTACATTTTTTGTATACATCTGAAACATTATTTTATAACGGTTA
ATATTTTTTCAATAAATAATCTTTTTAGAACTTATATTTTTCTTATGTCTACCTTTTCCCATATACATTGTATATTTTTT
AAATATTTTATACTTCCTCCGTTTCTTTTTAGTCTGCATATAAGATTTGGTTAAAGTCAAACTTTGTTAACTTTGACTAA
GTTTATAGATAAAAATATCAAGATTCATAATATGAAATTAATATTGTTAGATGCATCATGAAATCAATTTTATATCATAT
AGCTTTAGTATTGTAGATCTTAATATTTCTTTTCTATAAAGTTGGTCAAATTTTAAAAAGTTTGACTTTGACCAAATCTT
ATATGCAGATTAAAAAGAAACGGAGAGAGTACAATTTTGTAATGCATGTTGAACATTATTGAAATACAAGTTCAGTTTTT
TTAGTACACGGTCAACATTTTTAGTACAGGGTTCCCTTCGTCTCGCTATAAGCGAGAAATATGGGCTCCAGCCCTCTTAC
GCCCCAGACTCGGCCTTCCCTCAGCCCATCCAAATGAGTTAAATTCTTTCGGCCTGCAAACCCAACAGGCCCCGCCCGCC
TGGGCTGCGCATTCTCCCCCAAAAGCGAATCACGACCGTCCATACAAACCCTCACCAGCAAATCCCCGCCATCCACTTCC
ACACAGAGGGATACATAACCCACCAGGAGCGCCGCCCGCTAGGGTTTTCTCTCCCCTTCCTGGTTGCGCAGCTCACCCCG
AACCCCCAGCTCCCCTCCCCGGCGCCGCCGCAACAGCAAGATGGTGAAGGGACGCACCGGCCAGCGCGTGAGGCTCTACG
TCCGCGGCACCATCCTCGGATACAAGCGGTGAGCAGCTCCCTCCGCCGCCGCGGCTTCGTTCCTT--------CTCCCTC
GCGTGCGTCT----CTGAGTTCGTGGGGCTTGGTTGGGCGC-----------------------------GCAGGTCCAA
GTCGAACCAGTACGAGACGGCGTCACTGGTGCAGATCGAGGGGGTGAACACCAGGGAGGACGTGGCCTGGTACGGCGGCA
AGAGGATGGCCTACGTCTACAAGGCCAAGACCAAGAGCAACGGCACCCACTACCGCTGCATCTGGGGCAAGGTCTCCCGC
CCCCACGGCAACACCGGCGTCGTCCGCGCCAAGTTCACCTCCAACCTGCCCGCCGAGGCCATGGTGAGTTGCTCGGTCGA
GCTTCTCCGGTTGTCTGTTTTGGTGGCATGCTTGCTACTCTTTGATGTACTGACTTGTGTTGTCT---------------
--GCTGACGGTGCTGTGGTGTTTGCTTTGCTCAGGGGAAAAAGGTCAGGGTCTTCATGTACCCGAGCAGCATCTAAAAGG
TTAGAATCGATCCATTGCTGGTTATATGTTTACCATC-------------CAGAATGTGTTGTTGCCTGATGCACAATTT
TCTAGATCGAGTTGTCAGTTATTCATGTTTCATCCATGTATATTTTGTTTGATCAGTGT-------AAAATCTT-ATCAC
ACACTTGCAATATATAATATGTGCTGGCATTTTTCTCTTGAGCAAATTGCACAGTGAAGTGGGAAAATGGGCACTACTTG
TGTATACTGAATTTGGTCCTGTATGTAAATTTGTGTATGGTATACTGAATTTGATA------------------------
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-----------------AAAACATCTTTTACTTACACTGAATAAGAGGGAGGGACAGAATGATGGTAGGGATGAGGAATT
GCTTGGTGTATTTCTCGTGTATGCTCAAGAATTTTAGTTTGATGATATTCTGTTGCCATAA-------------------
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-------------------------------------------TATCTTATTTGGTGCATAATTATGATTCGAAATTCTG
ATTGTAAATCTTGATTTACAGCCTTCTGTTTGATCCCCTGCTAATGTTATATGTCGCATCGAATGCAGGTTACTTTGAAG
TGTGGAGGATTTCGCTCGCCCCTTAGGTTTCATTTCAGAGTCTTGTAAGATGGATTCAGGCCCGGATAGCAAGTTGAACT
GCTGTTTCACTGTGAAGAACTGTAGTCTTCATGTTATCTCGAATGTGTGGGTCGCACATTATATGATGTTATATGTAGTT
CGAACCTGATGCTGT-TTTTGCCCACTTTCTGCGTTCTATCCTTGCAATTTTAGCTATCAAATCTGATTCAGTGATGGTT
TTACTCTTCTGATATGAATGTTTGTATGCCCTTTTGATGATTGGTGGAAGAGTTTAACTTCTTTTGGCTGGGTACTGACC
AGCGCAAGAACTTGTTTGATTGAGAAGAT------------------------------------CTGTTAGACTACCGA
GGTTCATGTGCACTTTGTGCTTATCCTCTCCCGGATCGTTAGCCTCTAGCTTGTTGTCAGTACCTCCCCATGCACGTTTC
CCTGCCCCCTGTGCATGTATTTTTTGCCCTTGGCCAG
>chrUn_784
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---------------------------------------------------------------AACAGGCCCCGCCCGCC
TCAGCTGCGCATTCTCCCCCAAAAGCGAATCACGGCCGTCCATACAAACCCTCACCAGCAAATCCCCACCATCCACTTCC
ACACAGAGGGATACATAACCCACCAGGAGCGCCGCCCGCTAGGGTTTTCTCTCCCCTTCCTGGTTGCGCAGCTCACCCCG
AACCCCCAGCCCCCCTCCCCGGCGCCGCCGCAGCAGCAAGATGGTGAAGGGACGCACCGGCCAGCGCGTGAGGCTCTACG
TCCGCGGCACCATCCTCGGATACAAGAGGTGAGCAGCT------------------TCGCTCCTTCTCCGGTTCTCCTTC
GCGTGGGTCTCTGACTGAATCCGTGGGGTTTGGTCGGGCGCG---------------------------TGCAGGTCCAA
GTCGAACCAGTACGAGACAGCGTCGCTGGTGCAGATCGAGGGGGTGAACACCAGGGAGGACGTGGCCTGGTACGGCGGCA
AGAGGATGGCCTACGTCTACAAGGCCAAGACCAAGAGCAACGGCACCCACTACCGCTGCATCTGGGGCAAGGTCTCCCGC
CCCCACGGCAACACCGGCGTCGTCCGCGCCAAGTTCACCTCCAACCTGCCCGCCGAGGCCATGGTGAGTTGCTCGGTCCA
ACTTCTCCGGCTGTCTGTTCCGGTGCCATGCCTGCTGCTCTTTGATGTACTATCTTGTGTCGCAT---------------
--GCTGACGGTGCTGTGGTGTTTGCTTTGCTCAGGGGAAAAAGGTCAGGATCTTCATGTACCCGAGCAGCATCTAAAAGG
TTAGAATCGATCCGTTGCTGGTTATTTGTTTACTATCTC-------------GAATGTGTTGTTGCCTGATGCACAATTT
TCTAAATCGAATTGTCAGCTATTCATGATTCATCCATGTGTATTTAGTTTGGTCCGTCCGTCAGTAAAAATCTT-ATCAC
ACACTTGCAGTATGTAATATGTGCTGGCATTCTTCTCTTGAGCAAATTACATAGTGAAGTGGGAAAATGGGCACTACTTG
TGTATACTGAATTTGGTCCCATATGTAAATTTGTGTATCATGCACAGATATTTCTGCTCTTGCAGCATCTTGCTGGACAT
GTGACTTCACCTTGATCAACTGAGGATTAGTCGCTTGGAACTTGCATAAAAAATAGCTGCATTAGTTAGCCTTTAGGCAT
TTGCAAGCACTATTGATACGTCATTTTTTACTTGCACTGAATAAGAGAGAGGGAAAGAATGATGGTAGGGATGAGTAATT
TCTGGTTGTGTTTCTCGCACATGCTCCGGAATTTTAGTTTGATGATATTCTGTTGCCGCAGTATCTTATTTTGTGCATAA
TTAATCATTTTTTACTTGCACTGAATAAGAGAGGGACAGAATGATGGTAGGGATGAGTAATTTCTGGGTGTGTTTCTCGT
ACATGCTTGAGAATTTTAGTTTGATGATAATCTGTTTCCCCAGTATCTTACTTTGTGCATAATTATGTTTCGAAATTCTT
CATATAAATCTTGATTCAGAGCCTTCTGTGTGATCCACTAGTAATGTTATATGTCCCATCGAATGCAGGTTATTTTGAAG
TCTGGAGGGTTTCGCTCGTCCCTTAGGTTTCATTTC-GAGTCATGTAAGATGGATTCAGGCCGGGATAGCAAGTTGAACT
GCTGTTTCCCTGTGAAGAACTGTAGTCTTCATGTTATCTTGAATGTGTGGGTCGCATATTATATGATGTTATATGTAGTT
CGAACCTGATGCTGTGTTTTGCCCACTTTTTGCGTTCTATCCTTGCAATTTTAGCTATCAAATCTGATTCAGTGATGTTT
TTACTCTTCTTTTATGAATGTTTGTATGCCCTTTTGATGATTGGTGGAAGAGTTTAACTTCTTTTGGCTGGGTACTGACC
AGCGCAAGAACTTGTTTGATTGGGAAGATCAAAATGCCTCCTAGGAAATTGTTGAACGCCCATGTCTGTTAGACTGCCAA
GGTTCATGTGCACTTTGTGCATGTCCTCTCCCGGATCGTTAGCCTGTAGCATGTTGTCAGCACCTCCCCATGCACGTTTC
CCTGCCCCCTGTGCATGTATTTTTTGCCCTTGGCCAG
>chr6D_786
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-----------------------------------------------------------------CAGGCCCCGCCCGCC
TCAGCTGCGCAGTCTCCCCCAAAAGCGAATCACGGCCGTCCATACAAACCCTCACCAGCAAATCGCCACCATCCACTTCC
ACACAGAGGGATACATAACCCACCACGAGCGCAGCCCGCTAGGGTTTCTTCT-CCCTTCCTGGTTGCGCAGCTCACCCCG
AACCCCCAGCTCCCCTCCCCGGCGCCGCCGCAGCAGCAAGATGGTGAAGGGACGCACCGGCCAGCGCGTGAGGCTCTACG
TCCGCGGCACCATCCTCGGATACAAGAGGTGAGCAGCTCCCTCCGCCGCCGCGGCTTCGCTCCTTCTCCGGTTCTCCCTC
GCGTGGGTCT-TGACTGAATCCGTGGGGTTTGGTCGGGCGCG---------------------------TGCAGGTCCAA
GTCGAACCAGTACGAGACGGCGTCGCTGGTGCAGATCGAGGGGGTGAACACCAGGGAGGACGTGGCCTGGTACGGCGGCA
AGAGGATGGCCTACGTCTACAAGGCCAAGACCAAGAGCAACGGCACCCACTACCGCTGCATCTGGGGCAAGGTCTCCCGC
CCCCACGGCAACACCGGCGTCGTCCGCGCCAAGTTCACCTCCAACCTGCCCGCCGAGGCCATGGTGAGTTGCTCGGTCGA
GCTTCTCCGGTTGTCTGTTTCGGTGGCATGCGTGCTGCTCTTTGATGCACTGACTTGCGCTGCCT---------------
--GCTGACGGTTCTGTCGTGTTTGCTTTGCTCAGGGGAAAAAGGTCAGGGTCTTCATGTACCCGAGCAGCATCTAAAAGG
TTAGAATCGATCCATTGCTGGTTATTTGTTTACCATCCAAGCGTCAGTTCCAGAATGTGTTATTGCCTGATGCACAAATT
TCTAGATCGAATTGTCAGTTATTCATGATTCATCCATGTGTATTTTGTTTAGTCAGTGT-------AAAATCTTGATTAC
ACACTTGCAATATGTAATATGTGCTGGCATTCT-CTCTCGAGCAAATTGCATAGTGAAGTGGG-AAATGGGCACTACTTG
TCTATACTGAATTTGGTCCCATGTGTAAATTTGTGTATGGTGTATGGATATTCCTGCTCCTAAACTA--TTGCTGGACAT
GTGACTTCACCTTGACCAACCAAGGATTAGTCGCTTGGAAGTTGCATAAAAGATAACTGCATTATTTAGCACTTAGGCAT
TTGCAAGTACTGTTAATAAATCATTTTTTACTTGCTCTGAATAAGAGAGAGGGACAGATTGATGGTAGGGATGTGGAATT
GCTGGGTGTATTTCTCGTACATGATCAAGATTTTTAGTTCGATGACATTCTGTTGCCATGA-------------------
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-------------------------------------------TATCTTATTTTGTGCATAATTATGGTTCGAAATTCTT
CATGTAAATCTTGATTCACAGCCTTCTGTTTGATCCCCTGCTAATTTTATACGTCGCATCGAATGCAGGTTATTTTGAAG
TGTGGAGGATTTCGCTCGTCCCTTAGGTTTCATTTCAGAGTCTTGTAAGATGGATTCAGGCCTGGATAGCAAGTTCAACT
GCTGTTTCCCTGTGAAGAACTGTAGTCTTCATGTTATCTTGAATGTGTGGGTCGCACATTATATGATGTTATATGTAGTT
CGAACCTGATGCTATGTTTTGCCCACTTTTTGCGTTCTATCCTTGCAATTTTAGCTATCAAATCTGATTCAGAGATGTTT
TTACTCCTCTTTTATGCATGTTTATATGCCCTTTTGATGATTGGTGGAAGTGGTTTAA-----TTGGCTTGGCACTGACG
AGCGCGAGAACTTGTTCGTTTGGGAAGAT---------------------------------------------------
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>chr7D_1001
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----------------------------------------ATGGTGAAGGGGCGCACTGGGCAGCGCGTCAGGCTCTACG
TCCGGGGCACCATCCTCGGGTTCAAGAGGTGAGCGGCCCC--------------------TCCTT--------CTCGCCG
GATCTGCCGTTCATTTCATGGCGGCGCGGA---TTGGGCGGCGCGCTGACGGGAAAGCGGGGAAATTTCTGCAGGTCCAA
GTCGAACCAGTACGAGAGCACGTCGCTGGTGCAGGTCGAGGGGGTGAACACCAAGGAGGACGTGGCGTGGTACGCCGGGA
AGCGCCTGGCGTACGTGTACAAGGCCAAGACCAAGAGCAACGGCACCCACTACCGCTGCCTCTGGGGCAAGATCACCCGC
CCGCACGGCAACTCCGGCGTCGTCCGCGCCCAGTTCAAGTCCAACCTCCCCGCCGAGTCCATGGTCAGTGCCCGCCCGCC
T---------------------------------CTAGTTTTTGATGTGCTGCTTGCTTGCTTGCCGGTGCCTTTTGCTG
AGGCTGTTTGTTGCTTTGCGTTTGTTGTGTGCAGGGGCGCAAGGTCAGGGTGTTCATGTACCCGAGCAGCATCTAA--GG
TTAGCATC------------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
-SS-------------------------------S--------------------------------S------------
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--------------------------------S-----------------------------------------------
--------------------------S--------------------------------S--------------------
-----S------------S-S-------S---------------------------------------------------
------------------------S-------------------------------------------------------
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--------------------S----------S------------------------------------------------
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-------------------------S------------------------------------------------------
----------S----------------S-----------S-----------S----------------------------
-------------S-----------------S-------------------S----------------------------
-------------------SS--------------------S---S--SS--SS-S------------------------
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--------------------S---S--------S-------------S--------------------------------
---S--------------SS------------------------------------------------------------
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-----------------------------------------------------S-------------S-----------S
SS--------------S-------------------------------------------------------S-------
------------------S-------------------------------------------S-----------------
--------S------------------------------S----------------------------------------
-----------------------------S-----------------------------------------------S--
----------SS--------------------------------------------------------------------
----------------------S----------------------------------------------------S--S-
--------------------S-S----------------------S----S---------S-------------------
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>forward_756
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----------------TCCCTCAGCCCATCCAAATG--------------------------------------------
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>reverse_2861
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------------------------------------------------------------TACCTCCCCATGCACGTTTC
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