>input_sequence_76931
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---------------------------------------------------------------ATGGCGGCTTCTTCTTC
CTCAGTTCGTTCCAGAGATAGACGCCAACACCTGCCGCTCATCATGTGCCCTGATTGCCAGGAGGTCAGGGTGGAGACAA
ACATCTGCAGCAAAGAAGGGCCGAACGAGGGGAGGCGCTTCTACAAGTGCCCGATTGACAGTGTAAGTTTTCATCAATGT
CCACAAGAAGTTCCATGGGAAAATCGATAAATGAAGTCTCACATTGTTGTTTGTGTTTTTTTTGTGGTATGGGGCTGAGC
AGGGCCCAGACAAGTGCGGCTGGTTCAGGTGGGAAGATGTTTACGCCGGAATCATTCGGCGGAGGGAAGCTCGCCTGAGG
TATGGAGACCCATACGGTGTCCAAGGTTCGAGCCAAGGTATGGCTGGACATGCTACGCAGACGCAGCCGGAGCAGGCACC
CGAGATCGTCAGGCAGCAGCGGACTGAACAAGCACAGGCCAGGGGAGGCCGCGACTGTCTCTTCATCTGCCTCATGGTGA
TCAACATGATCTTCACCCTGACCATCCTTTCACGGGTGTGA---------------------------------------
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>chr5A_1_TraesCS5A01G154500
CCCGCAGCCCAAGGCGGGGATCCACCGCCTGGCGTTCATCGTGTTCCGGCAGACGGTGAGGCAGGTGATCTACGCGCCGG
GGTGGCGCCCCAACTTCAACACCAGGGATTTCGCGGCGTGCTACTGCCTTGGCGTGCCGGTCGCCGCCGCCTACTTCAAC
TGCCAGAGGGAGGGCGGCTGCGGTGGCCGGAGGTGCAGCTGAAGTCCACGGCGACAAGGCTGTCCGACCGTCGCCCATCA
TCGACAACAGGACCCGGTCCGACCTAATTATTGAAGGCAAAGAAAGTATGACATACACATGTACAACGTAG------TAT
AAGTATGCATGC------------CGTGCATTGTGAGAGAGTGCGTGCGATTGCCAAGATAGAATATTGTGTATGTATTT
GTATCTGTGTGTTTTATGGAGCTTATCAACATGACAAGTACTAAGAAGTACTGATATCTC-----TAATATAATATTTGC
GGTACACTGAGGTGATCTTGCTCACATGTTCGGTATATCTCCTTTGCACGCGAAAAAGTGTTCCATATAAGTATCTCATA
CCTTGTATATTTAAATAGTTAGCCCATAACCGAAAATGCCGTTTGGCGGACGAGCTCTATGCAGCTCGGTATCCTAGTCG
TCTATAATCGCATCTAGCAGCTGCACCAACACATTTAATGACATGTATTCGAGCTGGCAAGGATATATGCCACACCGTAT
TCTATATTTTCGTGCAGTAGCATCCCAGGACTGACGAAAATGCATGGCAGGCTAGTTAGACGTGCCATCGATCCACCCAT
TATGTGCATGCAGTGCTAGCAGCTAATCCACTCACTGACGAACATGGGCAAGCTCACGCTCCCATGTTCAGAGATAAGCC
GATGAGCTAATCGTTTGGAATCCGAACGTTGGGTCTGACGATCAGACCGTTGGGGAAATGCTCTATTTATACCGCCGGAG
AACAGCAGCCTAATGCTTCTCCTCCTCTCAGCTCTCATCAGTGAATAGCTTGGAATCGCAGCAATGGCGGCTTCTTCTTC
CTCAGTTCGTTCCAGAGATAGACGCCAACACCTGCCGCTCATCATGTGCCCTGATTGCCAGGAGGTCAGGGTGGAGACAA
ACATCTGCAGCAAAGAAGGGCCGAACGAGGGGAGGCGCTTCTACAAGTGCCCGATTGACAGTGTAAGTTTTCATCAATGT
CCACAAGAAGTTCCATGGGAAAATCGATAAATGAAGTCTCACATTGTTGTTTGTGTTTTTTTTGTGGTATGGGGCTGAGC
AGGGCCCAGACAAGTGCGGCTGGTTCAGGTGGGAAGATGTTTACGCCGGAATCATTCGGCGGAGGGAAGCTCGCCTGAGG
TATGGAGACCCATACGGTGTCCAAGGTTCGAGCCAAGGTATGGCTGGACATGCTACGCAGACGCAGCCGGAGCAGGCACC
CGAGATCGTCAGGCAGCAGCGGACTGAACAAGCACAGGCCAGGGGAGGCCGCGACTGTCTCTTCATCTGCCTCATGGTGA
TCAACATGATCTTCACCCTGACCATCCTTTCACGGGTGTGATGAGCTACTGTCAAGCACCCTATCCGTTCTAATCGTAGA
CATATGTTTTCCAATTATCCACTGTAATCCTTTCCCTCTAGTTCTAGTTGCGAGTCACTGAGCCTGTTGATTAGGTCGTT
AATGGGTCATCGAGTTAGCATGCAAAAGCTTGTCAGTGTATGCTTCAAGTTTATGTTAATTAATAATCAGCTCATCAATG
TATGATTATCTGCATCATCGGATGGACACGCTAATCAGTCTGGCCAGCGGAAAAATGTTGACATAGTCAGAGAGAGGCCC
CACTTTTTGCTTGACTGGTGATATCTACTTGCTGGACGTAGTAAATTGTGTTGACTAGTCAGGTCGGGTGTTAACTCTGT
CGCCAACTGTGCACACAACCACCATCACCCAACAGTAAATAGAACGCGCGCTGAAACTAGAAGGGAGCGGTGCGAGCCAT
CTCCCCTGCTTTTCTGCCTCGCTCACCGCACGCCATCTCGGCATCTCCTTCCTCCCCC-ACCAGCGCTGAAGCTTGCATC
GTATCCATGGCACCAGCCACTTAAGCAAACGGGTTCAGCCCTGCGAGTCGAGGATTCAAGCAAGAAGAGGAGGCAGTGAG
GATTCAAGCAAGAACAGGAGGCAGGTATGTAAAGGCAAATCCAACTCTCTGTATCACACTCGCAGTTGCAAAAACTATTC
ATCTATAGCAGTAGGGATCCATTGAAATGCTCGAGTTTAGTACGGATTATTATAGAAAGCCATTTGATTTACCAGATCCA
TCTTGTATTTTCTGTTCAATCTGTAGCGCGCACCTCATCACATCGGCGTCTTCGGCCGGCATGGAAAGCAATGTAGACCT
AGAGGCGTCTGATTTACAGGTCACAGATAACTGGGAGTTCGCATCCGCCGTAGGCCCAGGCGCAGTTACATCTAGGATTT
CAGTGCAAAAGCCGTGCAACATATTCTCCCAGTTTGGACAGTTCAAGAGGAAGTTGATAGCAGAGATTGGTTTTGAAGGC
GT
>chr5D_1
CCCGCAGCCCAAGGCGGGGATCCACCGCCTGGCGTTCATCGTGTTCCGGCAGACGGTGAGGCAGGTGATCTACGCGCCGG
GGTGGCGCCCCAACTTCAACACCAGGGATTTCGCGGCGTGCTACTGCCTTGGCGCGCCGGTCGCCGCCGCCTACTTCAAC
TGCCAGAGGGAGGGCGGCTGCGGTGGCCGGAGGTGCAGCTGAAGTTCACGGCGACAAGGCTGTCCGGCCGTCGTCCATCA
TCGACAACAGGACCCGGTCTGACCTAATTATTGAAGGA--------TATGACATACACATGCACAACGTAG------TAT
AAGTATGCATGCAGACATGCATGCCGTGCATTGTGAGAGA--GCGTGCGATTGCCAAGATAGAATATGGTGTATGTATTT
GTATCTGTGTGTTTTATTGAGCTTATTAACATGACAAGTACTAAGAAGTACTAATATCTC-----TAATAT-----TTGC
GGTACACTGAGGTGATCTTGCTCACATGTTCGGTATATCTCC-TTGCACGCGAAAAGGTGTTCCATATAAG---------
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>chr5B_1
CCCGCAGCCCAAGGCGGGGATCCACCGCCTGGCGTTCATCGTGTTCCGGCAGACGGTGAGGCAGGTGATCTACGCGCCGG
GGTGGCGCCCCAACTTCAACACCAGGGATTTCGCGTCGTGTTACTGCCTTGGCGCGCCGGTCGCCGCCGCCTACTTCAAC
TGCCAGAGGGAGGGCGGCTGCGGTGGCCGGAGGTGCAGCTGAAGTTCACGGCGACAAGGCTGTCCGACCGTCGTCCATCA
TCGACAACAGGACCCGATCTGACCTAATCATTGAAGGCAAAGAAAGTACGACATACACATGTACAACGTATAGTATATAT
AAGTATGCATGCAGACATGCATGCCGTGCATTGCGAGAGAATGCGTGCGATTGCCAAGATAGAATATGGTGTATGTATTT
GTATGTGTGTGTTTTATTGAGCTTATCAGCATGACAAGTACTAAGAAGTACTAATATCTGTAATATAATAT-----TTGT
GGTACACTGAGGTGATCTTGCTCACATGTTC-------------------------------------------------
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>chr1A_567
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-----------------------------CCGAAAATGCCGTTTGGCGGACGAGCTCCATGCAGCTCGGTATCCTAGTCG
TCTGTAATCGCATCTAGCAGCTGCACCAACGCATTTAATGACATGTATTCAAGCTAGCAAGGATATATGCCACACCGTAT
TCTGTATTTTCGTACAGTAGCATTCAAGGACTGACGAAAATGCATGGCAGGCTGGTTAGACGTGCCATCGATCCACCCAT
TATGTGCATGCAGTGCTAGCAGCTAATCCACTCACTGACGAACATGGGCAAGCTCACGCTCCCATGTTTAGAGATAAGCC
GATGAGCTAGCCGTTTGGAATCCGAACGTTGGGTCTGACGATCAGACCGTTGGGGAAATGCTCTATTTATACCGCCGGAG
AACAGCAGCCTAATCCTTCTTCTCCTCTCAGCTCTCATCAGTGAATAGCTTGGAAGCGCAGCAATGGCGGCTTCTTCTTC
CTCAGTTCGTTCCAGAGATAGACGCCAACACCTGCCGCTCATCATGTGCCCTGATTGCCAGGAGGTCAGGGTGGAGACAA
ACATCTGTAGCAAAGAAGGGCCGAACGAGGGGAGGCGCTTCTACAAGCGCCCGATCGACAGTGTAAGTTTTCATCCATGT
CCACAAGAAGTTCCATGGGAAAATCGATAAATGAAGTCTCACATTTTTGTTTGTGT--TTTTTGCGGCATGGGGCTGAGC
AGGGCCCAGACAAGTGCGGCTGGTTCAGGTGGGAAGATGTTTACGCCGGAATCATTCGGCGGAGGGAAGCTCGCCTGAGG
TATGGAGACCCATACGGTGTCCAAGGTTCGAGCCAAGGCATGGCTGGACATGCTACGCAGACGCAGCCGGAGCAGGCACC
CGAGATCGTCAGGCAGCCGCGGACTGAGCAAGCACAGGCCAGGGGAGGCCGCGACTGGCTCGTTATCTGCCTCATGGTGA
TCAACATGATCTTCACCCTGACCATCCTTTCACGGGTGTGATGAGCTACTATCAAGCACGCTATCCGTTCTAATCGTAGA
CATATGTTTTCCAATTATCCACTGTAATCCTTTCCCTCTAGTTCTAGTTGCGAGTCACTGAGCCTCTTGATTAGGTCGTT
AATGGGTCATCGAGTTAGCATGCAAAAGCTTGTCAGTGTATGCTTCAAGTTTATGTTTATTAATAACCAGCTCATCAATG
TATGATTATATGCATCATCGGATGGACACGCTAATCAGTCTAGCCAGCGTAAAAATGTTGACATAGTCAGAGAGAGGCCC
CACTTTTTGCTTGATTGGTGATATCTACTTGCTGGACGTAGTAAATTGTGTTGACTAGTCAGGTCGGGTGTTAACTCTGT
CGCCAACTGTGCACACAACCACCATCACCTAGCAGTAAATAGAACGCGTGCTAAAACTAGAAGGGAGCGGTGCGAGCCAT
CTCCCCTGCTTTTCTGCCTCACTCACCGCACACCATCTCGGCATCTCCTTCCTCCCCCTACCAGCGCTGAAGCTTGCATT
GTATCCATGGCACCAGCCACTTAAGCAAACGGGTTCAGCCCTGCAAGTCGAGGATTCAAGCAAGAAGAGGAGGCAGCAAG
GATTCAAGCAAGAACAGGAGGCAGGTATGTAAAGGAAAATCCAACTCTCTGTATCACACTCGCATTTGCAAAAAATATTC
ATCTGTAGCAGTAGGGATCCATTGAAATGCTCGAGTTTAGTACAGATTATTATAGAAAGCCATTTGATTTACCAGATCCA
TCTTGTATCTTCTGTTCAATCTGTAGTGCGCACCTCATCACATCGGTGTCGTTGGCCGGCATGGAAAGCAATGTAGACCT
AGAGGCGTCTGATTTACAGGTCACAGATAACTGGGAGTTCGCATCCGCCGTAGGCCCAGGCGTAGTTACATCTAGGATTT
CAGTCCAAAAGCTGTGCAACATATTCTCCCAGTTTGGACAGTTCAAGAGGAAGTTGATAGCAGAGATTGGTTTGAAGGCG
T-
>SNPs
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------------------------------------------------------S-------------------------
---------------------------------------------S---------------------------S------
-------------------S------------------------------------------------------------
----------------------------------------S--------------------------S------------
-----------------S----------------------------------S------------------SSSSS----
------------------------------------------S-------------S--------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------S----------------------
---S--------------------------S-------------------S----S------------------------
---S---------S---------S-S---------------------------S--------------------------
--------------------------------------------------------------------S-----------
---------SS---------------------------------------------------------------------
--------------S-----S----------------------------------S------------------------
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-------S---------------------------------------S-------S-------------------S----
---------------------------------------------S----------SS------S--S------------
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--------------------------------------S-----------------------------------------
-----------------S---------S-----------------------------S---S-S----------------
--------------------------------------------------S--------S--------------------
-----------------------------------------------------------------S--------------
---------------------------------------------------------S--------S-------------
---------S-------------------------------S-------S------------------------------
--------------S-----------------------------------------------------------------
-----------------------------S-S----------------S---S---------------------------
--------------------S----------S-----------------------------------------------S
--------------------------------------------S-------------------------------SS--
-----------------------------------S----------------------------S---------S-----
----S--------------------------------------S------------------------------------
--------S-----------------S-------------------S---S-S---------------------------
--------------------------------------------------------------S-----------------
----S-------S------------------------------------------------------------SS-S-SS
SS
>forward_671
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-----------ATCTAGCAGCTGCACCAACA-------------------------------------------------
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>reverse_1802
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-----------------------------------------GGCCAGCGGAAAAATGTTGA-------------------
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