>input_sequence_76879
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---------------------------------------------------------------ATGTCTCTTTATACATC
AGTTATTTGGTTGATTCTTTCCAAGGAAGGCACCGAGAGGAAAGATGGTCTCACTCGATTTATTTCTGCTACTTGCAGCT
CTGCGATTAGAGCTATTGGCTCAGGCTGCGGGCTGCCTGGATCCTGGATGGGCAGGCCTAGAGGTGGGAAGGCCAAGGAA
TCGATGGAAGCTGCGAAGAACGAGGACGCGGGTAGCGCGGGTGAGGAGGTGATCCCAGCCTACAAGAGGAGGGGACGGCC
ACAGAAGCTTTTCAAGCACGACGTCGATGAGGAAGAGGATGTCGCCAAGGTTGAAGACGACGGCGACGGCACAAAAGAAG
AGATTGCGCCACGCAGGGAGTCGACGGGCGCAGCTGGGAACGGAGGGAAGAAGAGGCGGCGACAGTCGAAGCGCGGCTCG
GCGTCAGCGACGGAGGAGAAGGGCGGCGCGCCAGCGAGGGCACCGACCGGATTCCGGCAGAATGGGAGCCGGCGGAAGAA
CACCCCGCGGAGAGCTGCGGAGGCGGGGGTGGAGAGCAAGTGA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>chr5D_1_TraesCS5D01G274000
TAAACCACAAGCAAAAGCGAGAAGAAATGGGTGGTTTTACCGTGACGCTGC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CCCCAGGATGCCCTGCGGGTACATTCCTGCCTGTGCC
TCCACGTTGTTACTGCGGTCCATGGGCGGTATAGCAACTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGAGAATA
GTGTGACCAGTTCTCCTCTGCCTCTTGGTTCTCTTCTCTTCTCTGTGTGCGCACAATCTTCCACAAAACCTCAGACGCTC
CCCACCCACCGTCCGTATCTGCTGCCCAT-AGTCCATTTGCCCAACAGCATCACCCTGTGCCTCCTCTGTTCTCCGTCTT
GTTCTTGCCCGAGAGCAACCGTAGATCAGTCCAGACAAACCATCAAAAAGGCCATAGATCAGTCCAGACAAACCAGCAAG
CCTCTGAAGATCTCCTCTTGCTGCAAGAATCCAAGAGAGGGGAGTTTTGCTAGAACAAGTTCGTCGCCTGCCTTGCCTTG
CCAGCCAGCCTCTGCGTCGTTGCAGGTTCTTCGTCGTTTCTTTCTCTGTTCTTCTGTTAATCAATCCCTAGTTGGACCTG
GGGTGATGATTTGGAGTTCTTGATAGCGCTCCACTA---GTAGATATGAGGTTGCTCG--CGGTTCTTGCCTTCTGTTTT
TGGTTGTTGGATTTAGATGGTACAGTGGTTAGGTTGCTTTGTAGCTGGTTCTCCTTGGATCCCCAC---------CAAGC
AAGCAAGCTTTCATTCCCACCTGAAATGTGCCGGAGT---------CCTTTGATGCTCCTGGTTCTACAGACTGATTTGT
GGTGAAATCATCGGAACTCTGGAAGATCTTTTGTGTATTTTACCCCCAACAGCAGATGGCATGCATCTGTAAGAAGGGAG
ACATCGTTAGATAGCCGAGCTTTTAAACCAACAGCTGCTTAATCTGAACCTTCTCTTAGCCATTTACAG-----TAGCAG
ATTTTCAGATGCTGACTGAAAGTCTGAAACC--GTCTTCTGCTCTCTTTGTTGACTGAAAATCATGTCTCTTTATACATC
AGTTATTTGGTTGATTCTTTCCAAGGAAGGCACCGAGAGGAAAGATGGTCTCACTCGATTTATTTCTGCTACTTGCAGCT
CTGCGATTAGAGCTATTGGCTCAGGCTGCGGGCTGCCTGGATCCTGGATGGGCAGGCCTAGAGGTGGGAAGGCCAAGGAA
TCGATGGAAGCTGCGAAGAACGAGGACGCGGGTAGCGCGGGTGAGGAGGTGATCCCAGCCTACAAGAGGAGGGGACGGCC
ACAGAAGCTTTTCAAGCACGACGTCGATGAGGAAGAGGATGTCGCCAAGGTTGAAGACGACGGCGACGGCACAAAAGAAG
AGATTGCGCCACGCAGGGAGTCGACGGGCGCAGCTGGGAACGGAGGGAAGAAGAGGCGGCGACAGTCGAAGCGCGGCTCG
GCGTCAGCGACGGAGGAGAAGGGCGGCGCGCCAGCGAGGGCACCGACCGGATTCCGGCAGAATGGGAGCCGGCGGAAGAA
CACCCCGCGGAGAGCTGCGGAGGCGGGGGTGGAGAGCAAGTGAGGCTCTGAAGACTGAAGAAGTGTGTGACGTAATGAGG
AACTGCAAATGTGACGTAACGAGGAACTGCATAATTGCAGTAGGTTGTTATGTACTAGCTTGA-------AAATTGCACT
ATTAGTGGTAGCTTTTAGGTTTAT---GAGTTACTGTGACATTATGGATTTTAGGGGTTTATGTCA-GTTAATTCTATGG
ACAGTGCTAGTGACTGGCATATGGATTAAAACTTTCTGAGAGAAACTCCATTTACAGTGCACTAATTGCTTCGTTTTTTA
TGAGAAACTTCCAATCTATTCATCTTCAATCATGGCAGTATAAAGAACAACAGAGATAATAAAAATTACAACCATGTTCG
TTAACCATCTAGCGACGACTACAAACACTGGATCGAGCTGAAGACGTGTTGTTGTCATCTCCCCTTCGTCACTGGAGCCG
GACAAACCTT-ATTGTAGTAGTCAGTCGGAAAGTCCGTCGTGCTAAGGCTCCATAGGACCAGCGCACTAGAGCAACAACC
ATTGCCGATGAAGAAAGGCGTAGGTCAGAAGGATCAAACATGTAAACACTCAAACGAAGATGAACGAAGACCGGATGAAA
ACAGATCCACCGAAGACCAGCACCGACCAAATCCCGCGAGATCCGATGAAGAAAC-ACCTTTACACTCCCTCTGACGATG
CTAGACGCACCATCGAGACAGTGATAGAACGTGGGAGATGTTATTCCTACTAAGT-ACATCGCCGCTGCCACACAA--CT
CAACCAAGACACTGATTCTAACAAGAACGAGAACGGG-TCCCTCCCGCCGTCGG----GCGGCCGAGATCCTCTGCACCT
CCATGGCTTCGAGGCCATCAG-AGATAGGGCGGACCGG-CGGCAGCGCCGACGAAAGGAGAAGGGGCTTTTC--TTGTGG
AGGAGGAAGGAGATACAACAACGCTTAGCCCTATCCACCGTACTATGCTTTCCTGTTCATGACATGCCTGACTAAACTAG
CAATTACAGTTTTGTTTTATTCTTAAAG
>chr5A_1
TAAACCACAAGCAAAAGCGAGAAGAAATGGGTGGTTTTACCGTGAC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GCTGCCCCAGGATGCCCTGCGGGTACATTCCTGCCTGTGCC
TCCACGTTGTTACTGCGGTCCATGGGCGGTATAGCA-------TCTTTCCCA------CTCTCCCTCTCTCTGGAGAATA
GTGTGACCAGTT-TCCTCTGCCTCTCGGTTCTCTTCTCTTCTCTGTGTGCGCACAATCTTCCACAAAACCTCAGACGCTC
CCCACCCACCGTCCGTATCTGCCGCCCAT-AGTCCATTGGCCCAACAGCATCACCCTGCGCCTCCTCTGTTCTCCGTCTT
GTTCTTGCCCGAGAGCAGCCGTAGATCAGTCCAGACAAACTAGCAAACCAACCATAGATCAGTCCAGACAAACCAGCAAG
CCTCTGAAGATCTCCTCTTGCTGCAAGAATCCAAGAGAGGGGAGTTTTGTTAGAACAAGCTCGTCGCCTGCCTTGCCTTG
CCAGCCAGCCTCCGCGTCGTTGCAGGTTCTTCGCCGTTTCTTTCTCTGTTCTTCTGCTAATCAATCCCTAGTTGGTCCCG
GGGTGATGATTTGGGGTTCTTGATTGTGCTCCACTG---GTAGATATGAGGTTGCTCGCGCGGTTCTTGCCTTTTGTTTT
TGGTTGTTGGATTTAGATGGTACAGTGGTTAGGTTGCTTTGTAGCTGGTTCTCCTTGGATACCCACCT-----AGCAAGC
AAGCAAGCTTTCATTCCCACCTGAAATAGGTCGGAGT---------CCTTTGATTCTCCTGGTTCTACAGACTGATTTGT
GGTGAAATCATCGGAACTCTGGAAGATCTTTTGTGTATTTCACCCCCAACAACAGACGGCATGCATCTGTAAGGAGGGAT
ACATCGTTAGATAGCCGAGC-TTTAAACCAACAGCTGCTTAATCTGAACCTTCTTGTAGCCATTTACAG-----TAGCAG
ATTTTCAGATGCTGACTGAAAGTCTGAAACCTTGTCTTCTGCTCTCTTTTTTGACTGAAAATCATGTCTCTTTATGCATC
AGTTATTTGGTTGATTCTTTCCAAGGTAGGCACCGAGAGGAAAGATGGTCTCACTCGATTTATTTCTGCTACTTGCAGCT
CTGTTATTAGAGCTATTGGGTCAGGCTGCGGGCTGCCTGGATCCTGGATGGGCAGGCCTAGAGGTGGGAAGGCCAAGGAA
TCGATGGAAGCTGCGAAGAACGAGGACGCCGGTAGCGCGGGCGAGGAGGTGATCCCAGCCTACAAGAGGAGGGGACGGCC
ACAGAAGCTTCGCAAGCACGACGCCGATGAGGAAGAGGACACCGCCAAGGTTGAAGACGACGGCGACGGCACAAAAGAAG
AGATTGCGCCACGCAAGGAGTCGACGGGCGCAGCCGGGAATGGAGGGAAGAAGAGGCGGCGGCAGTCGAAGCGCGGGTCG
GAGTCAGCGACGGACGGGAAGGGCGGCGCTCCGGCGAGAGCTCCAACCGGATTCCGGCAGAATGGGAGCCGGCGGAAGAG
CACCCCGCGGAGAGCTGCGGAGGCGGGGGTGGAGAGCAAGTGAGGCTCCGAAGACTGAAGAAGTGTG-------------
-------------ACGTAATGAGGAACTGCCTAATTGCAGCAAGTAGTTATGTACTACTCCAGTAGCTTGAAAATGCACT
ATTAGTGGTAGCTTTTAGATTTATTATGAGTTACTATGACATTATGGATTTTAGGGGTTTATGTCA-GTTGGTTCTATGG
CCAGTGCTAATGGCTGGCACATGGATTAAAACTTTATGAGAGGTACTCCATTTACAGAGGGCTAATTGCTTC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>chr5B_1
TAAACCACAAGCAAAAGCGAGAAGAAATGGGTGGTTTTACCGTGACGCTGCCCCAGGAATGCAGATTCTGTGAGCTTATG
CACCCGGGCCTCACTATCCTAACGCTCCATTGTTGCTTTGAGATCTGTGCTACACAACTACCTTATTACATGGAATTTTC
TCTTTTTTGTTCCTCTCATATAAAACATGCCTTGAACTTCAAACTTTGCAGTACAACATAACTTTGTAACTAGAATGTGA
GATAAAACTTTCAGATTTTTTTGTCCGACATAAATATGAAAAATAAGTTTTTTTAATCAAATAAATCTCATTTTGTATAT
TTATGTTGGACCAAAAAATCTGTAAGTTTTATCCCACATTCTACATAGAAAGCTTTGTTGTGCTGCAAAGTTGAAAGTAC
AAAAACATGTTCTATATGAGAGAAACAAAAAAGAGAAAATTATTTGCACGAATCCTGATGCAGAAATGAGTGGTTGGATA
AGGAGTACCCGGGTGCATAGGCTCTAAAACATGTTTTCGGCTGCCCCAGGATGCCCTGCGGGTACATTCCTGCCTGTGCC
TCCACGTTGTTACTGCGGTCCATGGGTGGTATAGCA-------TCTCTCCCTCTCTCTCTCTCTCTCTCTCTGGAGAATA
GTGTGACCAGTTCTCCTCTGCCTCTTGGGTTTCTTCTCTTCTCTGTGCGCGCACAATCTTCCACAAAACCTCACACGCTC
CCCACCCACCGCCCATATCTGCTACCCAAGAGTCCATTGGTCCAACAGCATCACCCTGTGCCTCCTCTGTTCTCCGTCTT
GTTCTTGCCCGAGAGCAACCGTAGATCAGTCCAGACAAACTAGCAAAACAACCATAGATCAGTCCAGACAAACTAGCAAG
CCTTTGAAGATCTCCTCTTGCTGCAAGAATCCAAGAGAAGGGTGTTTTGTTAGAACAAGTTCATCGCCTGCCTTGCCTTG
CCAGCCAGCCTCTGCGTCGTTGCAGGTTCTTCGTCGATTCTTTCTCTGTTCTTCTGTTAATCAATCCCTAGTTGGTCCTG
GAGTGATGATTTGGAGTTCTTGATAGCGCTCCACTAGAAGTAGATGTGAGGTTGCTCGCACGGTTCTTGCCTTTTGTTTT
TGGTTGTTGGATTTAGATGGTACAGTGGTTAGGTTGCTTCGTAGCTGGTTCTCCTTGGATACCCACCACACCAAGCAAGC
AAGCAAGCGTTCATTCCCACCTGAAATGTGTCGGAGTCCAGTATTCCCTTCGATGCTCTTGGTTCTAGGGACTGATTTGT
GGTGAGATCATCACAACTTTGGAAGATCTTTTGTGTATTTTACCCCCAACAACAGATGGCATGCATCTATAAGGAGGGAT
CCATCGTTAGATAGCCGAGG-TTTAAACCAACAGCTGCTTAATCTGAACCTTCTCTTAGCCATTTACAGTACTCTAGCAG
ATTTTCAGATGCTGACTGAAAGTCTGAAACCATGTCTTCTGCTCTCTTTTTTGACTGAAAATCATGTCTCTTTATGCATC
GGCTATTTGGTTGATTCTTTCCAAGGTAGGCACCGAGAGGAAAGATGGTCTCACTCGATTTATTTCTGCTACTCGCAGCT
CTGTGATTAGAGCTATTGGGTCAGGCTGCGGGCTGCCTGGATCCTGGATGGGCAGGCCTAGAGGTGGGAAGGCCAAGGAA
TCGATGGAAGCTGCGAAGAACGAGGACGCCGGTAGCGCGGGCGAGGAGGTGATCCCAGCCTACAAGAGGAGGGGACGGCC
ACAGAAGCTTCTCAAGCACGACGCCGATGAGGAAGAGGACACCGCCAAGGTTGAAGACGACGGCGACGGCACAAAAGAAA
AGATTGCGCCACGCAAGGAGTCGACGGGCGCAGCCGGGAACGGAGGGAAGAAGAGGCGGCGGCAGTCGAAGCGCGGCTCG
GAGTCAGCAACGGAGGAGAAGGGCGGCGCGCCGGCGAGGGCGCCGACCGGATTCCGGCAGAATGGGAGCCGGCGGAAGAG
CACCCCGCGGAGAGCTGCAGAGGCGGGGGTGGAGAGCAAGTGAGGCT-TGAAGACTGAAGAAGTGTGTG-----------
-------------ACGTAATGAGGAACTGCCTAATTGCAGCAAGTAGTTATGTACTAGCTTGA-------AAATTGCACC
ATTAGTGGTAGCTTTTAGGTTTAT---GAGTTACTGTGATATTATGGATATTAGGGGCTTATGTCAAGTTAATTCTATAG
CCAG-----------GGCACATGGATTAAAATTTTCTGGGGGGAACTCCGTTTACAGAGCGCTAATTGCTTC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>chr7D_1793
TGCATCATTTTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------------TT
CGAGAAACTTCCAATCTATTCATCTTCAATCATGGAAGTACAAAGAACAACAGAGGTAATAAAAATTACAACCATGTCTG
TAGACCACCTAGCGACGACTAAAAGCACTGGAGCGAGCCGAAGGCGCGCCGCCGTCATCAGCCCTCCCTCA-TGGAGCCG
GGCAAACCTT-GTTGTAGTAGACATTCGTGAAGT-CATTGTGCTAAGGCCCCATAGGACCAGCGCATCAGAGTAGTAAAC
ATCGCCGATGAAGAAAGTCGTAGATCAGAAGAATCAAACCTGTAAACACCCAAACGAAGACGAACAAAGACCGGATCCAA
ACAGATCCACCAAAGACCAGCACCGACCGAATCCCGCGAAATCCGACGGAGACAA-ACCTCCATACGCCCTCCGACGATG
CTAGACACACCATCGAGACGGGTATAGAACATGGGAGACACTATTCCTACTAAGGGACATCGCCACCGCCACACAT-CCC
CAACCAAGACACTGAATCTAACAAGAACTAGAATGGGGTCCCTCCTGCTGGCGA----GGTGCCGAGATCCTCCGCACAT
CTATGGCCTAGAAGCCATCGAA-GATGGAGCGGACAGG-CGGTGTAGCCGATGGGAGGAGAAGA-GCTTTTC--TTGTGG
AGGAGAAAAGAGA-------------------------------------------------------------------
----------------------------
>chr2A_1796
TTCT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TTTTTTG
TGAGAAACTTCCAATCTATTCATCTTCAATCATGGGAGTACAAAAAATAACAGAAGTAATAAAAATTACAACCATGTCTG
TCAACCACTTAGAGACGACTACAAGCACTGGAGCGAGCCGAAGGCGCGCCGCCGTCATCGCCCCTCCCTCACCGGAGTCG
GACCAACATT-GTTGTAGTAGACAGTCGGGAAGT-CGTCGTGCTAAGACCCCAAAGGACCAGCGCACCAGAGTAGCAACC
ATCGCCGATGAAGAAAGTCGTAGATCAGAAGGATCAAACCTGTAAACACCTAAATGAAGACGAACGGAGACCGGATCCAA
ATAGATCCACCGAAGACCAGCACCGACCAAATCCCGCAAGATCTGACGGAGACAA-ATCTCCACACGCCCTCCGACGATG
CTAGACGCACCATCGGACCGGGGATAGAACATGGGAGACATTATTCCTACTAAAGGACATCGCCGCCGCCACACAT-CCC
CAACCAAGATGCTGACTCTAACAAGAACGAGAACGGGGTCCCTCCCGCCGGCGG----GGGGCCGAGATCCTCCGCACCT
CCATGGCCTAGAGGCCATCGGAAGATGGGGCGGAACGA-CGGCGGCGCCGACGGGAGGAGAAGA-GCTTTTC--TTGTGG
AGGAGGAAAGAGATA-----------------------------------------------------------------
----------------------------
>chr6A_1800
T------TTTTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------TT
CAAGAAACTTCCAATCTATTCATCTTCAATCATGGCAGTACAAAGAACAACAAAGGTAATAAAAATTATAACCATGTCCG
TGGACCACCTAGCGACGACTACAAGCACTGGAGCGAGCCGAAGGCGCGTCGCTGTCATCGCCCTTCCATCACCGGAGCCG
GGCAAACCTT-GTTGTAGTAGACAGTCGGGAAGT-CATCGTGTTAAGACCACATATGACCAGCGCACCAGAGCAGCAACC
ATCGCCGATGAAGAAAGTCGTAGATCAGAAGGGTCAAACCTGTAAACACCCAAACAAAGACGAATGAAAATCGGATCCAA
ACAGATCCACCGAAGACTAGCACCGCCCGAATCCCGCGAGATCCGACGGAGACAA-ACCTCCACACGCCCTCAGACGATG
CTAGACACACCATCGGGATGAGAATAGAACGTGGGAGATATTATTCCTACCAAGGGACGTCGCCGCCATCACACAA-CTC
CAACCAAGACGTTGAATCTAACAAGAACAAGAAGGGGGTCCCTCCCGCCGGCAG----GGGGCCGAGATACTCCACACCT
CCA--GCCTAGAGGCCATCGGA-GATGGGGCGGACCGG-CTGCGGCGCCGACGGGAGGAGAAGA-ACTTTTC--TTGTAG
AGGAGGAAAGAGAT------------------------------------------------------------------
----------------------------
>chr3A_1800
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TTTTTTG
CGAGAAACTTCAAATCTATTCATCTTCAATCAAAGCA-TACAAAAAACAATATAGGTAATAAAAATTACAACCATATTCG
TAGACCACCTAACGACGACTACAAACACTGTAGCAATTCGAAGGCGCGTTGTCGTCATCGCCCCTCCCTCACTGGAGCCA
GGCAAACCTT-ATTGCAGTAGATAGTCGGGAAGT-TGTCGTGCTAAGGCTCCATAGGACCAACACACTAGAGCAGCAACC
ATCACCGATGAAGAAAGTTGTAGATCAGAAGGATCAAACATGTAAACACTCAAACAAAGAAGAATGAAGACCGGATCCAA
ACAGACCCACCGAAGACCAGCACCGACCGAATCCCACGAAATTCGATGGAGACAC-ACCT-CACGCGCCCTCCGACGATG
CTAGACGCACCATCGGGGTGTGGGTAGAGCATGTGAGACATTATTCCTAATAACGGACGTCGACGCCGCCACATAG-TCC
CAACCAAGACACTGAATCTAACAAGAACGAGAAGAGGGTCCCTCCCGCCGGCGGAGGGGGGGACGAGATCCTCCCCACCT
CCATGGCTCAGAGGCCATCGGA-GATGGGACGGACCGTCCGGCGATGCCGAAGGGAGGAGAAGGGGCTTTTC--TTGTGG
ATGAGGAAAGAGATA-----------------------------------------------------------------
----------------------------
>chr3D_1800
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TTTTTTT
CAAGAAACTTCCAATCTATTCATCTTCAATCATGGCAGTATAAAGAACAACAGAGATAATAAAAATTACTACCATGTCTG
TGGACCACCTAGCGACGACTACAAGCATTGGAGCGAGCCGAAGCCGCGCGCCCGTCATCGCCCCTCTCTCACCGGAGCCA
GACAAACCCT-ATTGTAGTAGTCAGCCGGAAAGT-CGCCGTGCTAAGGCCCCATAGGACCAGCGCACTAGAGTAGCAACC
ATCGTCGATGAAGAAAGTCGTAAATCAGAAGGATCAAACCTGTAAACACCTAAACGAAGACGAACGAAGACCGAATCCAA
ATAGATCCACCGAAGACCAGCACCGACCGAATCCTGCAAGATCCTACGGAGAAAA-ATCTCCACGCGCCCTCCGACGATA
CTAGACGCACCATCTGGACGGGGATAGAACGTGGGAGACATTATTCCTACCAAGGGACATCGCCAACGCCACACAGC-CC
CAACCAAGACGTTGACTCTAACAAAAACGAGAACGGGGTCCATCCTGTCAGCAG----GGGGGCGAGATCCTCCACGCCT
CCATGCCCTAGATGCCATCGGA-GATCGGACAGACCGA-CGGCAGCGCCGATGGGAGAAGAAGAGATCTGATCTTTGTGG
AGGAGGAAAGAGAT------------------------------------------------------------------
----------------------------
>chr1B_1800
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTTTTTG
CGAGAAACTTACAATCTATTCATCTTCAATCATGGCAGTACAAAGAACAACAGAGGTAATAG-AATTACAACCATGTTCA
TGGACCACCTAGCGACGACTACAGGCACTGAAGCCAGCCGAAGGCGCGCCGCCGTCATCGCCCCTCCCTCACTGGAGCCG
GGCAAAACCTTGTTGTAGTAGACAGTTGGGAATT-CGTCGTGCTAAGGCCCCATAGGACCAACGCACCAGAGTAGCAACC
ATCGCCGATGAAGAAAATCGTAGATCAGAAGGATCAAACCTGTAAACACCTGAACGAAGACGAACGGAGACCGGATCCAA
ATAGATCCAATGAAGACCGACACCGACCAAACCCCGCAAGATCCGACGGAGACAA-ACCTCCACACGCCCTCCGACGATG
GTAGACGCACCATCGGGACATGGATAAAACATGGGAGACA-TATTCCTACTAAGGGACATCGCCGCCGCCACACAGCTCT
CAACCAAGAAGTTGACTCTAACAAGAACGAGAACGGG-TGTCCCTCC---GCGG----GGGGCCGAGATTCTCCGCACCT
CCATGGCCTAGAGGCCATAGGA-GATGAGACGGACCAG-CGGCGGCGCCGATGGGAGAAGAAAA-GCTTTTC--TTGTGG
AGGAGGAAAGAGATTACA--------------------------------------------------------------
----------------------------
>chr5B_1808
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-GAGAAACTTCCAATCTATTCATCTTCAATCATGGCAGTACAAAGAACAA----GGTAATAAAAATTACAACCATGTCCG
TGGACCACCTAGCGACGACTGCAAGCACTGGAGCGAGCCGAAGGCGCGCCTCCGTCATCGGCCCTCTCTCACCGGAGCCG
GGCAAA-CCTTGTTGTAGTAGTCAGTCTGAAAAT-CGTCGTGCCAAGGCCCCATAGGACCAATGCACCAGAGTAGCAACC
ATCGCCGATGAAGAAAGCCGTAGATCAAAAGGATCAAACATGTAACCACCTAAATGAAGATGAACGAAGACCGGATCCAA
ATAGATCCACCGAAGACTAGCACCAACTGAATCCCGCAAGATCCCACGGAGACAAAACCTCCACACGCCCTTCGACAATG
CTAGACGCACCATCGGAACGGGGATAAAACATGAAAGACATTATTCCTACTAAGGGACATCGCCGCCGCCATAAAAC-CC
CAACCAAGACGCTGACTCTAACAAGAACGAGAATGGGGTCCCTCCCACCGGC-G----GGGGCCGAGATCCTCCGCACCT
CCATGGCCTAGAGGCCATCGGA-GACAGGACGGACCGG-CAGCGGCGCCGACGGGAGGAGAAGAGCTTTTTC--TTGTGG
AGGAGGAAAGAGAT------------------------------------------------------------------
----------------------------
>chr1D_1811
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----AAACTTCCAATCTATTCATCTTCAATCATGACGGTACAAAGAACAACAGAGGTAATACAAATTACAACCATGTCCG
TGGACCACCTAGCGACAACTACAAGCACTAGAGCGAGCCAAAGGCGCGGCGCTGTCATCGCCCCTCCCTCACCGGAGCCG
GGCAAA-CCTTGTTGTAGTGGACAGTCGGGAAGT-CGTCGTGCTAAGGCCCGATAGGACCAGCACACCAGAGTAGCAACC
ATCGCCGATGAAGAAAGTCGTAGAGCAGAAGGATCAAACCTGTAAACACCTAAGCGAAGACGAACGAAGACCGGATCCAA
ATAGATCCACCGAGGACCAGCATCGACCGAATGCCGCAAGATCCGATGGAGACAA-ACCTGCACACGCCCTCCGATGATT
CTAGACGCACCATCGGGACGGGGATAGAACGTGGGAGACATTATTCCTACTAAGGGACAACGCCGCCGGCACACAGC-CC
TAACCAAGAAGCTGACTCTAACAAGAACGAGAACAGGGTCCCTCCCGCCGGTGG----GGGGCCGAGATCCTCTGCACCT
CCATGGCCTAGAGGCCATCAGA-GATGGGACAGAATGG-CGGCGACGC--A---GAGGAGAAGA-GATTTTC--TTGTGG
AGGAGGAA------------------------------------------------------------------------
----------------------------
>chr1D_1811
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----AAACTTTCAATCTATTCATCTTCAATCATGGCAGTACAAAGAACAACAGAGATAATAAAAATTACAACTATGTATG
TGGACCACCTAGCGACGATTACAAGCACTGGAACGAGCCGAATGCGCGCTGTCATCATCGCCCCTCCCTTACCGGAGTCG
GGCAAA-CCCTGTTGTAGTAGACAGTTGGAAAGT-TGTCATGCTAAGGCCCCATAGGACCAGCGCACCAGAGTAGCAACC
TTCATCGCTGAAGAAAGTCATAGATCAGAACGATCAAACATGTAAACACCCAAACGAAAACGAACAAAGACCGGATGCAA
ACAGATCCACCGAAGACTAGCACCGACTGAATCCCGCGAGATCCGACAGAGACAC-ACCTCCACACGCCCTCCGACGATG
CTAGACTCACCATCAGGACGGGGATAGAACGTGGGAGACATTATTCCTACTAAGGCACATTGCCGCCGCTACACAGC-CT
CAACCAAGACATTGAACCTAACAAGAA-GAGAACAGAATCCCTCCTCTCGGCGG----GGGGCCAAGATCCTCCGCACCT
CCATGGCCTAGAGGCCGTCGGA-GATGGGGTGGACCGG-CGGCGGCGGCGA---GTGGAGAAGA-GCTTTTC--CTGTAG
AGGAGGAAAGAGATA-----------------------------------------------------------------
----------------------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------SSSSSSS------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
----------------------------------------S-S-----SSS-----------------------------
-------------------------------------------------S------------------------------
---------------------------------------------------------------------------S----
-------------------------------------------------------------------------S------
------------------------------------------------------------S-------------------
------------------------------S-------------------------------------------------
---------------------------------------------------S---------------------S-----S
--------------------S-----------------------------------------------------------
-------------------------------------------------S-------------------------S----
--------------------------S-----------------------------------------------------
---S---------------S------------------------------------------------------------
-----------------------------S-----------S--------------------------------------
----------S------------S---------------SSS--------------------------------------
---------------S------------------S--------------------------S------------------
-S------------------------------S--------S-------------------------------------S
---------------------------------------------------------------------SSSSSSSSSSS
SSSSSSSSSSSSS------S----------S---------S-S--S----------------------------------
--------------------------------------------------------------------------------
S--------S--S------S----------------------S--------------S--S-----------S------S
--------------------------------------------------------------------------------
-S-----S------------------------S-----S----S--S------------S-----S-S------------
----------------------------------S---------------------------------------S-----
--S--------------S-----S-----------------------------------------------------S--
------------------------------------------------S-----------SS----S-----S-------
---------------------S-----------------S--------------S-----------S-------------
---------------S----------------------------------S--------S--------------------
---------S-------------------------------------------SS-------------------------
--------S------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_603
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GGGCGGTATAGCAACTCCTC-------------------------------------
--------------------------------------------------------------------------------
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----------------------------
>reverse_1771
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------TTCAAGCACGACGTCGATGA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_930
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TCCAAGAGAGGGGAGTTTTGC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_1875
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TGGGAACGGAGGGAAGAAGA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>forward_1771
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GGACGGCC
ACAGAAGCTTT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_2980
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AACGCTTAGCCCTATCCACC-----------------------------------------
----------------------------
