>input_sequence_76845
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---------------------------------------------ATGAAGAGGGGACCTGAAGCAGAAGAACAGATATT
AGGTAATCAAGGTGATGAAGCTGGTCGCGCCGATGACAATACCTCAACGCCATGGCTAAAGCTGGGCCTCGATGCACTGA
GAAGCGAAGCGGCTAAGCCTCCAGAGGCCAAACCTGTGGCCACCCCTCAACGGACGTTCTCCTGCAACTACTGCCTGAGG
AAGTTCTTCAGCTCGCAGGCCCTTGGCGGGCACCAGAATGCACACAAGAAGGAAAGGTGTGCAGCCAGGAGATCACGAAG
CTTTCAGCAACTGATGATACGCTTTCCTCCAACTGCCTCCTTCATCCAACCTATGAGGGCCAGCCCCCACTCCACAATTC
TGACTGCACAAGGTGAAAGGGCCGCTGTTGTTGTTGCAAGATTTCATGACGGCCAAATGAGAAACAGGATGCCTTTTGCA
GTAGAGGAAGCTGCCTATTTAGTGTGGCCTGGGAGCTTCAAAGCAAGTCTTCAGGAGACCATGAAGCAACCAGAGGAAAA
TATTGATTTGAGCCTGCATTTGTAA-------------------------------------------------------
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>chr2B_1_TraesCS2B01G210500
TCAAAAGTGCTCCTCCATGTATCACTATACAGAATAAATAAGCACAATCATTGTGCTGTGAGTGGATCATGACCATCCAC
TTGTTCCCGGGCAGAAAGCTCCTGTGTGTTTACCTCGGGGAGTGCCGACCGCTCATGGCAAAGAGTGGCGGATGCACTCA
AGCTGAAGTCATTTCGAAGCCGCTGATGCAGGCTAAGCTTTAGGGTTAGATAGAGAATGCCAGGCGCCGTCTATGCCTGA
GCCTCAAGAGACAAAGAGAGAGAACGTGCATGAGATAAGATCAATGATGACCTCAAATCAAAAAAAGCAACAACTACGTT
TGAACAAATAATATCTAGGCCGTAGCACTTTTCACTGAGAGTGCTATATTGTCAATCAAACTAATCGACTGGAAAGGGTT
CATATTAAATGGGGTTAATCCACGCAAACTTCATTATTGACTCTGAACAAAATCTAGCAGCGAAAAATAAGAAGGCAATT
TCACCGTTCGACCGTAGCAGACTTCTTTTCCACATACATTTCTGAACTAATCATGGCAAGGAAGTATACCAACATGAACA
GTGGATTCCTAGATGACAGGTGAGCAAATCAGAAAATGGTCAATCATACTATGAGGTTTTTTTAACTGTACTACGTCATA
G--ATATGTACTGCAACATTGGTACCCAAAATAAGCCCATATCTGATCAGGAAAGAACTAGATAAGAAACTGAAGTTTCC
CGTGACGGGACAGTATACATGAAAGACACACCTTACGGAATAACGAAAAGCCAACGAGCTGACCACCACGACAAGGAAAC
TGGTACGTAAGCAAACTAGGAAAATAGATAGGCATGCAGACTAGCATATCCTGATCCACTTTAAACTCCTGGAAAC-TTT
TGCCTTTACCCCTGAATTATTGCCACTTGCAGACCCCTGCTCCTTTTTATACCAAACCAGAGGACTACCATCATAACACA
AACCTAGAGCAATCCTCTATTGTGCCACTCCCAACAAGGAAAG--ATGAAGAGGGGACCTGAAGCAGAAGAACAGATATT
AGGTAATCAAGGTGATGAAGCTGGTCGCGCCGATGACAATACCTCAACGCCATGGCTAAAGCTGGGCCTCGATGCACTGA
GAAGCGAAGCGGCTAAGCCTCCAGAGGCCAAACCTGTGGCCACCCCTCAACGGACGTTCTCCTGCAACTACTGCCTGAGG
AAGTTCTTCAGCTCGCAGGCCCTTGGCGGGCACCAGAATGCACACAAGAAGGAAAGGTGTGCAGCCAGGAGATCACGAAG
CTTTCAGCAACTGATGATACGCTTTCCTCCAACTGCCTCCTTCATCCAACCTATGAGGGCCAGCCCCCACTCCACAATTC
TGACTGCACAAGGTGAAAGGGCCGCTGTTGTTGTTGCAAGATTTCATGACGGCCAAATGAGAAACAGGATGCCTTTTGCA
GTAGAGGAAGCTGCCTATTTAGTGTGGCCTGGGAGCTTCAAAGCAAGTCTTCAGGAGACCATGAAGCAACCAGAGGAAAA
TATTGATTTGAGCCTGCATTTGTAATTTCTAATCCATAATCCCATGTATAAACATTTTCTGTGAAGTCAATATTTTGCAT
CATCTTTTGAGGTGAGGGAATAAGATTCCAAACTTGTACCCACAGTTGCAGGTGAGTTCTCAGACAAGTTTCAAAACTAG
AAAACAATAATCTATGTGTGATACCTGGTAAAGAGTAACAAGTTTAAACTTGAGTAATCTTCAATCTAGTTACTAAGAAG
TAGGAACCATACATACAATCCACCGATCAGTATTAAGCTATAAATGAGATAAGAAACAAACTTTAGTCAGCGCTGTCGTG
GTGATTAGCGTTGCTCTAAGGACTCCAATTCAAATTTTATGCGCCTCACTTGATCACCAAACGTTATTTCAAAAGATAAA
CTACATGCAACACATTTGCTGCTTTATCAAAGACTTAAAACATTTCTATGCATTGGAAGTTTGTTGGCAACCATGAATG-
-CTCTGGACTTTGGAGCTTATCAAACAACACCAGTTGTATTGAACTATTATCATATAAAGGCTAACTGCTGCAACCTTAT
AGATTGCATTTGCATATCTCAAGTCGTACATGTGAATATGTGTATTCTTGTCAACGACAGGATGTTAATTGGTCCATCAG
TGTGCATGAATACAAGCAAAATAGTGTGGAAGAATCAGA-GAAAAAAATAATAAATATATTGACATGTCAATGGATGCAT
ACGTGGAAAGAACAAAATTTCGTTATTTTAATGCTGAAGGCAAGTGCATGGCATAGGAATCTTCTTGTGCAAGCATAAAA
ACAAGCAAGGGGATAGAGAAAAGGTGAGAATGTGAGATGCCAAAAGAAATACTTTAGAAATGGAAACACGGGATGACCAC
AACTGTTGGCTACAATGTACACTACAAACTTCCATGAGAACGCTTCC-AACGCTTATACTGTATATGCAGAAATTGTTGG
CTCACAAAATCATTGGAAACTAATGTCTCCGAAATACATCACATGTCCTTCTAGAAAGCCACCTCGGTA
>chr2D_1
TCAAAAGTGCTCCTCCATGTATCACTATACAGAATAAATAAGCACAATCATTGTGCTGTGAGTGGATCATGACCATCCAC
TTGTTCCCGGGCAGAAAGCTCCTGTGTGTTTACCTCGGGGAGTGCCGACCGCTCATGGCAAAGAGTGGCGGATGCACTCA
AGCTGAAGTCATTTCGAAGCCGCTGATGCAGGCTAAGCTTTAGGGTTAGATAGAGAATGCCAGGCGCCGTCTATGCCTGA
GCCTCAAGAGACAAAAAGAGAGAACGTGCATGAGATAAGATCAATGATGACCTCAAATCAAAAAAAGCAACAACTACGTT
TGAACAAATAATATCTAGGCCGTAGCACTTTTAACTGAGAGTGCTATAATCTCAATCAAACTAAACAACTGGAAAGGGTT
CATATTAAATGGGGTTAATCCACGCGACCTTCATTATTGACGCTGAACAAAGTCTAGCAGCAAAAAAGAA-ACGGCAATT
TCACCGTTCGACCGTAGCAGACTTCTTTTCCACATACATTTCTGCACTAAAAATGGCAAGGAAATATACAAACATGAACA
GTGGATCCCTAGATGGCAGGTGAGCAAATCAGAAAACGGTCAATCATACTATGAGGTTTTTCAAACTGTACTACGTCATA
T--ATATGTACTGCAACATTGGTACCCAAAAAAGGCCCATATCTGATCAGGAAAGAACTAGATAAGAAACTGAAGTTTCC
CGTAACGGGACAGTATACATGAAAGATGCACCTTACGGGATAACAAAAAGCCAACGAGCTGACCACCGCGACAAGGAAAC
TGGTACGTAAGCAAACTAGGAAAATAGATAGGCATGCAAACTAGCATATCCTGATCCACTTTAAACTCCTGGAAAC-TTT
-GCCTTTTCCCCTGAATTATTGCCACTTGCAGACCCCTGCTCCTTTTTATACCAAACCAGAGGACTACCATCATAACACA
AACCTTGAGCAATCCTCTATTGTGCCACTCCCAACAAAGGAA-AAATGAAGAGGGGACCTGAAGCAGAAGAACAGATATT
AGGTAAGCAAGGTGATGAAGCTGGCCGCGCCGATGACAATACCTCAACACCATGGCTAAAGCTGGGCCTTGATGCACTGA
GAAGCGAAGCGGCTAAGCCTCCAGAGGCCAAACCTGTGGCCACCCCTCAACGGACGTTCTCCTGCAACTACTGCCTGAGG
AAGTTCTTCAGCTCGCAGGCCCTTGGCGGGCACCAGAATGCACACAAGAAGGAAAGGTGTGCAGCCAGGAGATCACGAAG
CTTTCAGCAACTGATGATACGCTTTCCTCCAACTGCTTCCTTCGTCCAACCTATGAGGGCCAGCCCCCACTCCACAATTC
TGACTGCACAAGGTGAAAGGGCCGCTGTTGTTGTTGCAAGATTTCATGACGGCCAAATGAGAAACAGGATGCCTTTTGCA
GTAGAGGAAGCTGCCTATTTCGTGTGGCCTGGGAGCTTCAAAGCAAGTCTTCAGGAGCCCATGAAGCAACCAGAGGAAAA
TATTGATTTGAGCCTGCATTTGTGATTTCTAATCCATAATTCCATGTATAAACATTTCCTGTGAAGTCAATATTTTGCAT
CATCTTTTGAGGTGAGGGAATAAGATTCCAAACTTGTACCTACAGTTGCAGGTGATTTCTCGGACAAGTTTCAAAACTAG
AAAACAATAATCTATGTGTGATACCTGGTAAATAGTAACAAGTTTAAACTTGAGTAATCTTCAATCTAGTTACTAACAAG
TAGGAACCATACATACAATCCACCGATCAGTATTAAGCTATAAATGAGATAAGAAACAAACTTTAGTCAGCGCTGTCATG
GTGATTAGCGCTGCTCTAAGGACTCCAATTCAAATTT-ATGTGCTTCACTTGATCACCAAACGTTATTTCAAAAGATAAA
CTACATGCAACACATTTGCTGCTTTATCAAAGACTT-AAACATTTCTATGCATTGGAAGTTTGTTGGCAACCATGAATG-
-CTCTGGACTTTGGAGCTTATCAAACAACACCAGTTGTATTGAACTATTATCATATAAAGGCTAACTGCTGCAACCTTAT
AGATTGCATTTGCATATCTCAAGTCGTACATGTGAATACGTGTATTCTTGTCGAAGACAGGATGTTAATTGGCTCATCAG
TGTGCATGAATACAAGCAAAATAATGTGAAAGAATCAGA-GAAAACAATAATAAATATATTGTCATATCAATGGATGCAT
ATGTGGAAAGAACAAAATTTCATTATTTTAATGCTGAAGGCAAGTGCATGGCATAGGAATCTTCTTGTGGAAGCATAAAA
ACAAGCAAGGGGATAGAGAAAAGGTGAGAATGTGAGATGCCAAAAGAAATACTTTAGAAATGGAAACACGGGATGACCAC
AACTGTTGGCTACAATGTACACTACAAACTTCCATGAGAACGCTTCCCAACGCTTACACTGTATATGCAGAAATTGTTGG
CTCACAAAATCATTGGAAACTAATGTCTCCGAAATACATCACATGTCCTTCTGGAAAGCCACCTCGGTA
>chr2A_1
TCAAAAGTGCTCCTCCATGTATCACTATACAGAATAAATAAGTACAATCATTGTGCTGTGAGTGGATCATGACCATCCAC
TTGTTCCCGGGCAGAAAGCTCCTGCGTGTTTACCTCGGGGAGTGCCG-------------AAGAGTGGCGGATGCACTCA
AGCTGAAGTCATTTCGAAGCCGCTGATGCAGGCTAAGCTTTAGGGCTAGATAGAGAATGCCAGGCGCCGTCCATGCCTGA
GCCTCAAGAGACAAAAAGAGAGAACGTGCATGAGATAAGATCAATGATGACCTCAAATCAAAAAAAGCAACAACTACGTT
TGAACAAATAATATCTAGGCTGTAGCACTTTTAACTGAGAGTGCTATATTGTCAATCAAACTAATCGACTGGAAAGGGTT
CATATTAAATGGGGTTAATCCACGCAAACTTCATTATTGACGCTGAACAAAGTCCAGCAGCGAAAAAGAAGACGGCAGTT
TCACCGTTCGGCCGTAGCAGACTTCTTTTCCGCATACATTTCCGAACTAATCATGGTAAGGAAATATACAAACATGAACA
GTGGATTCCTAGATGACAGGTGAGCAAATCAGAAAATGGTCAATCATACTATGAGGTTTTTCAAACTGTACTACGTCATA
GAGATATGTACTGCAACATTGGTACCTGAAATAGGCCCATATCTGATCAGGAAAGAACTAGATAAGAAACTGAAGTTTCC
CGTAACGGGACAGTATACATGTAAGACGCACCTTACGGGATAACAAAAAGCCAACGAGCTGACCACCACGACAAGGAAAC
TGGTACGTAAGCAAACTAGGAAGATAGATAGGCATGCAAACTAGCATATCCTGATCCACTTTAAACTCCTGGAAACTTTT
-GCCTTTTCCCCTGAATTATTGCCACTTGCAGACCCTTGCTCCTTTTTATAGCAAGCGAGAGGACTACCATCATAACACA
AACCTTGAGCAATCCTCTATTGCACCACTCCCAACAAAGAAAGAAATGAAGAGAGCACCTGAAGCAGAAGAGCAGAAATT
AGCTAGCCAAGGTGATGAAGCTGGTCGCGCCGACAATAGTACACCGACACCATGGCTAAAGCTGGGCCTTGATGCACTGA
GAAGTGAAGAAGCTAAGCCTCCAGAG------------GCCACCCCTCAACGGACGTTCTCCTGCAACTACTGCCTGAGG
AAGTTCTTCAGCTCGCAGGCCCTTGGTGGGCACCAGAATGCACACAAGAAGGAAAGGTGTGCAGCCAGGAGATCACGAAG
CTTTCAGCAACTGATGATACGCTTTCCTCCAGCTGCTTCCTTCATCCAACCTATGAGGGCCAGCCCCCACTCCACAATTC
TGACTGCGCAAGGTGAAAGGGCCGCTGTTGTTGTTGCAAGATTTCATGACGGCCAAATGAGAAACAGGATGCCTTTTGCA
GTAGAGGAAGCTGCCTATTTCGTGTGGCCTGGGAGCTTCAAAGCAAGTCTTCAGGAGCCCATGAAGCAACCAGAGGAAAA
TATTGATTTGAGCCTGCATTTGTAATTTCTAATCCATAATTCCATGTATAAACATTTTCTGTGAAGTCAATATTTTGCAT
CATCTTTTGAGGTGAGGGAATAAGATTCCAAACTTGTACCCACAGTTGCAAGTGAGTTCTCAGACAAGTCTCAAAAATAG
AAAAAAATAATCTATGTGTGATACCTGGTAAAGAGTAACAAGTTTAAACTTGAGTAATTTTCAATCTAGTTACTAGGAAG
TAGGAACCATACATACAATCCACCGATCAGTATTAAGCTATAATTGAGATAAGAAACAAACTTTAGTCAGCACCATAGTG
GTGATTATCGTTGCTCTAAGGACTCCAATTCAAACTT-ATGTGCCTCACTTGATCACCAAACGTTGTTTCAAAAGATAAA
CTACATGCAACACATTTGCTGCTTTATCAAAGACTT-AAACATTTTTATGCATTAGAAGTTTGTTAGCAACCATGAATGC
TCTCTGGACTTTGGAGCCTATCAAACAACACCAGTTGTATTGAACTATCATCATATAAAGGCTAACAGCTGCAACCTTAA
AGATTGCATTTGCATATCTCAAGTCATACATGTGAATACGTGTATTCTTGTCAAAGACAGGATGTTAATTGGTTCATCAG
TGTGCATGAATACAAGCAAAGTAATGTGGAAGAATCAGAAGAAAATAATAATAATAA-ATCGACACATCAATGGATGCAT
ATGTGGAAAGAACAAAAGCCCATTATTTTAATGCTAAAGGCAAGTGCATGGCATAGGAATCTTCTTGTGGAAGCATAAAA
ACAAGCAAGGGGATAGAGAAAAGGTGAGAATGTGAGATGCCAAAAGAAATA-TTTAGAAATGGAAACACGGGGTGACCAC
AACTGTTGGCTACAATGTATACTACAAACTTCCATGAGAACACTT-CCAACGATTACACTGTATATGCAGAAATTGTTGG
CTCACAAAATCATTGGAAACTAATGTCTCCGAAATACATCACATGTACTTCTGGAAAGCCACCTCCGTA
>SNPs
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---------------S----------------------------------------------------------------
--------------------------------S-----------------------------------------------
-----------------------------------------S---------S---------------S----S-------
---------------------------------------------------------------S-----S----------
-------------------------------------------------------------SS-----------------
---------------------------------S----------------------------------------------
---S-----------------------S----------S-----S-----------------------------------
--------------------------------------S-----------------------------------------
S------S------------------------------------------------------------------------
-----S-------------------------------S------------------------------------------
------S-----------------------------------------S--------------------S----------
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------------------------------------S-------------------------------------------
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--------------------S------------------------------------S----------------------
----------------------------------------S---------------------------------------
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-------------------------------------S---S--------------------------------------
------------------------------------S-------------------------------------------
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--------------------------------------S---------------S------------------S------
-----------------------S---------------------S--------------------S-------------
-S-------------------S-----------------------------------------------S----------
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--------------------------------------------------------S-----------------------
----------------------------------------------------S----------------
>forward_998
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------------------ATTGTGCCACTCCCAACAAG------------------------------------------
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>reverse_1882
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-----------------------------------------CGCCTCACTTGATCACCAAAC------------------
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