>input_sequence_76825
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----------------------------------------ATGGCTCCCGCGGCAGTCGTTGGTGAAGCAAGTGGTAAGA
TAACGACGACGGGTGAAGTTTCAGAAGAAAAAAAAAGACGACGGGTGGCACTGAGCAGCGTAGGGGCGATGTCACTGAGG
TACGTTGACATACAGATAGTGTATGTGTAGTATGTAGCAGTACAATGGCCGTTGCATTGACTTGCCGCTTGCAGGACGGC
CATGAAGCCGGAGGCGTGGACCACGACCGGCGAGGAGGGTGAAGAGCAGTGGGATCAATACGAGGTGAGATCGTTATTCA
GAAAGATTGTCTTGTCTTCTCTCGGACGGTATTTGTCAGGCAGTAACATGAACAACAATGCAGCGTGAGGTGTTGGAGTT
TGAGGAGGAAGCATGGAAGACCTCCGCAAAAGGCGGGGAATCTAGCACGGTCAAGCTGGCGGGTGAGGAGAGCTTCGGCG
AGCACGATCCAGCCGGCGCAGTCATTATCAACGATGTACCAGCCTTCTT--GATAGCGTTGGCGGCGCTGAAAAGCTGGA
GGAATCAGATACAGAGGAGATGA---------------------------------------------------------
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>chr4B_1_TraesCS4B01G222900
ATTTACAGAAGAACCTACTAAGAGTGTGGTGAAACCAGAACTTGGTTTGAGTTTCGACTAGTTGGGTGAGGCGTATGACT
TTGACAACTTTTGTTCAGCGGAGGTTGGCTTTGGGATATGGTATGGCAAGAGTAGACTGCATCCTGAGAGAACCAATTTA
GTGCAAGAGATCGTGTATGGCTCTTTGGTGAGAGATATTTGTGTTCATCTGAATTTTGTTTTCGATGACAGTGCTTTCTG
ACAGGAGGGATTAACATGGATTATTTATTATGTGGACTTGATGTGCACGGACGAGCAAGTAGAAAGTTTTGAGTGGGTGT
TTGCACAATTTCTTATTATGATGGGTGGACCTGCTCCAAAAACAATACTCATAGGTTTTGCACTGTACTAACTTGGGGCG
GCAATATTCATTTCTGGTTTTCTTGCATTTGATATAGCTGACTAGTTGTTTTTGACAGTCTTTGCAGACTATATCATAGC
TAAGCCGGCCATTGCCAAAGTGTATCCACACAGTGTGCACAGATGGTGCAAATGGCACATACTGAGAAAGCAAAGGAGTG
TCTGGGTCCGTTGTGCATGAAGAAGAATGAGTTCAGACCTGAGTTTCACAAGGTTGTGAACCACATGTTGATGATCGACG
AGTTTGAGGCTGCTTCAGGTATGCTGTTGGATAAGTACAATTTACGGAAGCATCCATATATGACGCAGATATATGATATT
AGAACTAAGTGGGTGAAGCCTTACTTCAAGGGTGTATTCTGCGCTGAGATGACAGGCACCCAACTTAGCGGTAGTGCTAA
TCACATGGTTCAGTAGGCATACAACTTGTGCAGGTCTCGGGTAGCGTGATGCAATTCGAATTTTGAACTGCTGCTTCAGT
GAATGCGATTTTTAAAATTGCAGTGGATTGTTATGCCAGGCAGGAGCACTATAAAAAGGATGGTACAACCAGCCAGTTGG
TTCTCAAAACTTTGTTCAGAACAGAGCAGGTAGAGCGTGCATGGCTCCCGCGGCAGTCGTTGGTGAAGCAAGTGGTAAGA
TAACGACGACGGGTGAAGTTTCAGAAGAAAAAAAAAGACGACGGGTGGCACTGAGCAGCGTAGGGGCGATGTCACTGAGG
TACGTTGACATACAGATAGTGTATGTGTAGTATGTAGCAGTACAATGGCCGTTGCATTGACTTGCCGCTTGCAGGACGGC
CATGAAGCCGGAGGCGTGGACCACGACCGGCGAGGAGGGTGAAGAGCAGTGGGATCAATACGAGGTGAGATCGTTATTCA
GAAAGATTGTCTTGTCTTCTCTCGGACGGTATTTGTCAGGCAGTAACATGAACAACAATGCAGCGTGAGGTGTTGGAGTT
TGAGGAGGAAGCATGGAAGACCTCCGCAAAAGGCGGGGAATCTAGCACGGTCAAGCTGGCGGGTGAGGAGAGCTTCGGCG
AGCACGATCCAGCCGGCGCAGTCATTATCAACGATGTACCAGCCTTCTT--GATAGCGTTGGCGGCGCTGAAAAGCTGGA
GGAATCAGATACAGAGGAGATGAGCAGAGGTCTGGCTAAGCGAGGGCGAATTGAACCATAGATGGACTTTGATGTTGGGG
AGATAGCAACGTTGCCACTGACCATTTTGGATGGCACGTACGTTGTGTACTGATTTGTTTTTCCGATTAGTTGTTTACTG
ATTCGTGACACCCTTGTGCGTGAAAGAAATTTGTTGGGAGCAGGCTGTTCAAACTAAAGGAATCCAAAATCCCTAGCCTT
TTGTAAACTGTTGTACAGCCAGAAACTTAATGGCCCATGGTTGAAATGGCGTGGAATGTTAATTTGTGCATGTATGTTTA
TCACGGTGAAGTGTATCGGCGAGGTGAGAAGAAGAGTAGAGGAGAATTTGCTAAACACGATCTTTGATTAATAATGTTAG
CTTACATGCATGGAGATTTCAGCGTGCATGTGGTAAATGGCAGATGGAACAGGAATACAGGATGGCGCAGGAAAAATGCA
GAGCCGTGCGGGACGAGCTGTTCCTT------------------------------------------------------
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------------------------------------------------------CTAACGGCGGCCGCTTTAAATGCGAT
GATGGCCCACAATATTTCTATATCACATACAGTGAGAATACTTGTTAGAATACAACTTATGGCGCTGATCCACATGTGAC
TGGATGGCTAAGATATCAGGTGCAGCTGAGCCCGGGCTCAGAAATGAATTTTCGGAATAATGGTAGCATTTTGTATGTTT
AGCACAATGGAAGTCTTATGCTCCATATCACATTTTTAAATCAATTTGCAGTCTTTTAAGTAAAGTAATGACACATTTTA
ACCTTTTGATCAGTATGATAGTTAGTAATTAGAAGCATACAAAAGTTTGAATTGCAATCTCATGCTATTGAAAAAGACCC
ATTTTTTGTCCTGCGATGGTTTCATGCATGATTTTGTCATAACTGGATGCTATTTGTTCCTGATGCGTCATTGCCATGAT
AAAAGTATACATTACAAAGAAAATATTCCCAGAATAAACTCCAATTCTTTTAAAAAAGGGACATTTACATCTGTGCCCCT
AACTCGAACCC
>chr3B_2
-TTTACAGAAGAACCTACTAAGAGTGTGGTGAAACCAGAACTTGGTTTGAGTTTCGACTAGTTGGGTGAGGCGTATGACT
TTGACAACTTGTGTTCAGCGGAGGTTGGCTTTGGGATATGGTATGGCAAGAGTAGACTGGATCCTGAGAGAACCAATTTA
GTGCAAGAGATCATGTGTGGCTGTTTTGTGAGAGATATTTGTGTTCATCTGAATTTTGTTTTCGATGACAGTGCTTTCTG
AC-GGAGGGATTAACATGGATTATTTATTATGTGGACTTGATGTGTACGGACGAGCAAGTAGAAAGTTTTGAGTGGGTGT
TTGCATAATTTCTTATTATGATAGGTGGACCTGCTCCAAAAACAATACTCATAGGTTTTGCACTGTACTAACTTGGCGCG
GCAATATTCATTTCTGGTTTTCTTGCATTTGATAAAGCTGACTAGTTGTTTTTGATAGTCTTTGCAGACTATATCATAGC
TAAGCCGGCCATTGCCAAAGTGTATCCACACAGTGTGCACAGATGGTGCAAATGGCACATACTGAGAAAGCAAAGGAGTG
TCTGGGTTCGTTGTGCATGAAGAAGAATGAGTTCAGACCTGAGTTTCACAAGGTTGTGAACCACATGTTGACGATCGACG
AGTTTGAGGCTGCTTCAGGTATGCTGTTGGATAAGTAAAATTTACGGAAGCATCCATATATGACGCAGATATATGATATT
AAAACTAAGTGGGTGAAGCCTTACTTCAAGGGTGTATTCTGTGCTGAGATGACAGGCACCCAACTTAGCGGGACTGCTAA
TCACATGGTTCGGTAGGCACACAACTTGTGCAGGTCTCGGGTAGCGTGCTGCAATTCGAATTTTGAACTGCTGCTTCAGT
GAATGCGATTTTTTAAATTGTAGTGGATTGTTATGCCAGGCAGGAGCACAATAAAAAAGGAT-------------GTTGG
TTCTTGAAACTTTGTTCAGAACAGAGCAGGTAGAGCGTGCATGGCTCCCGCGGCAGTCGTTGGTGAAGCAAGTGGTAAGA
CAACAACGACGGGTGAAGTTTCAGAA--AAAAAAAAGACGACGGGTGGTGCTGAGCAGCATAGGGGCGATGTCACTGAGG
TACGTTGACATACAGATAGTGTGTGTGTGGTATCTAGCAGTACAATGGCCGTTGCATTGACTTGCCGCTTGCAGGACGGC
CATGAAGCCGGAGGCGTGGACCACGACCGGCGAGGAGGGTGAAGAGCAGTGGGATCAAGACGAGGTGAGATCGTTATTCG
GAAAGATTGCCTTGTCTTCTCTCGGACGGTATTTATCAGGCAGTAACATGAACAACAATGCAGCGTGAGGTGTTGGAGTT
TGAGGAGGAAGCATGGAAGATCTCCGCAAAAGGCGGGGAATCTAGCACGGTCAAACTGGCGGGTGAGGAGAGCTTCAGCG
AGCACGATCCAGCGGGTGCAGTCATTATGGACGATGTACCATCCTTCTTGCGATAGCGTTGGCGGCGCTGAGAAGCTGGA
GGAATCAGACGCAGAGG---TGAGCAGAGGTCCGGCTAAGCGACGGCGAACTGAACCATAGATGGACTTTTATGTTGGGG
AGATAGCAACGTTGCCACTGACCATTTTGGATGGCACGTACGTTGTGTACTGATTTGTTTTTCTGGTAAGTTGTTTACTG
ATTCGTGACACCCTTGTGCGTGAAAGAAATTTGTTGGGAGCAGGCTGTTCAAACTAAAGGAATCCAAAATCCCTAGCCTT
TTGTAAACTGTTGTACAGCCAGAAACTTAATGACCCATGGTTGAAATGGCGTGGAATGTTAATTTGTGCAAGTATGATTA
TCACGGTGAAGTGTATCGGCGAGGTGAGAAGAAGAGTAGAGGAGAATTTGCTAAACACGATCTTTGATTAATAATGTTAG
CTTGCATGCATGGAGATTTCAGCGTGCATGTGGTAAATGGCAGATGGAACAGGAATACAGGATGGCGCAGGAAAAATGCA
GAGCCGTGCGGGACGAGCTGTTCCTT------------------------------------------------------
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------------------------------------------------------CTAACGGCGGCCGCTTTAAATGAGAT
GATGGCCCATAATATTTCTATATCACACACGGTGAGAATAC---------------------------------------
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>chr6A_1784
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-------------------------CTTAATGGCCCATGGTTGAAATGGCGGGGAATATTAATTTGTGCATGTATGTTTA
TCACAGTGAAGTGTATCGGCGAGGTGAGAAGAAGAGTAAAGGAGAATTTGCTAAACACGGTCTATGATTAATAATGTTAG
CTTGCATGCATAGAGAGTTCAGCGTGCATGTGGTAAATGGCAGATGGAACAGGAACACAGGATGGTGCAGGAAAAATGCA
GAGCCGGGAGAGCTGTCCTTCTAAGGCTGGCCATAGTGGGGGTAACATAAGTAGTAACATACAGTTGGAACTCACAAACA
TGCTTATGTGGCAGTCAATTAAAGAAGAGAGATGGTTATAGTAACATAGTTAGATACCGTAACATAATAAATGTTATACT
ACTATGTGTCATGCATGGCAATAAATGAGACCACCTATGATACTAATTTATGTTACTATGCACTATATATGTAGTATCAT
ACACTAGTATCATATGCATGATACTAGTATATGATACTCCCCACTATGACCAGCCTAACGGCGGCCGCTTTAAATGAGAT
GATGGCCCACAATATTTCTATATCACATACGGTGAGAATACCTGTTAGAATACAACTTATGGTGCTGATCCATATGTGAC
TAGATGGCTAAGATA-----TGCAGCTGAGCCCGAGCTCAGAAATGAATTTTC---------------------------
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>SNPs
S-------------------------------------------------------------------------------
----------S------------------------------------------------S--------------------
------------S---S-----S---S-----------------------------------------------------
--S------------------------------------------S----------------------------------
-----S----------------S-----------------------------------------------------S---
----------------------------------S--------------------S------------------------
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-------S---------------------------------------------------------------S--------
-------------------------------------S------------------------------------------
-S---------------------------------------S-----------------------------S-S------
-----------S-------S----------------------------S-------------------------------
-------------S------S----------------------------S-------S-SSSSSSSSSSSSSSSS-----
----SS--------------------------------------------------------------------------
S---S---------------------SS--------------------SS---------S--------------------
----------------------S-----S----S----------------------------------------------
----------------------------------------------------------S--------------------S
---------S------------------------S---------------------------------------------
--------------------S---------------------------------S---------------------S---
-------------S--S-----------SS-----------S-----------------------------S--------
---------SS------SSS------------S----------S------S-------------------S---------
---------------------------------------------------------------S-S-S------------
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---S----------------------------------------------------------------------------
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----------------------------------------------------------------------------S---
------------------------------S----------S--------------------S---------S-------
-S-------------SSSSS--------------S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS
>forward_568
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--------------------------------------------------------------------AGCAAAGGAGTG
TCTGGGTC------------------------------------------------------------------------
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>reverse_2699
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----------------------------------------------------------CCTGATGCGTCATTGCCATG--
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