>input_sequence_76809
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------------------------------------------------------------CTATATATAGAGTTGCTTGT
AGCTTTGGCCAGGCACAACCACAGCAAAAACCATCATTCCACGAG-CAGACGCGGGACAGTGCAGAGC--TTCC---CAG
AGAAGCTTAGGAGCAACGATGAAGAGTAGCACACTCCTGGTCATCCTGATCCTTCAGGCCGTCCTGGTCATGGGAATCCT
CTCACAGGCGAACGGTATGGTTGCTGATTGCCGTATTCTGATTTCATTGTAAT------CTTTAGCTT--ACACACACAA
GTGA--------TAGTTAACTGATGCCAATCCA---------------------GTTAACAAGGCGATTAACTGATCTGA
T--------------------------------------TCCATGCGTGCGTGCAGCCGAGTTCCCCAAGTGCTGCGACA
ACTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGATGACGCCGGCCCCAAGTGCCGGGACGGCTGCGTGAACTGCCGCGTC
GTGCAGACGAGCCCTAAGAAGACGTTCCGATGCGCCGATGCTCGCGCCGACGACGGCACGCCCTGCAAGCCCTGCAAGAA
GCACTGATCGCACATGCTCAGGACATAAGATGTTGGACCGA----AA---------------------------------
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>chr1D_1_TraesCS1D01G265900
TTGCACAACACAACCTCGACGTGCGGAAGGACGCCAAGCGAGTCAAACAAGCCCTCTGTCGCTCCGCCATAGAGAAACGA
CGGGCCATTGGTGAGGAGATCGCCCGACTCCTAACCGTCGGGTTCATCGGG-GAAGTCGCGCACCTGGAGTGACTGGCCA
ATCCATTCATGGTGCGCAA---AAAGAACATGTTATGTCGCATGTGTGTTGACTGAAGTGGCCGCAACAAAGTATGCCCA
AAGGACTTATTCCCTCCGCCTCACATTGACTAAGTTATAGATTCAACCGTGGAATGTGAACGCATGTGCTTCTTGGATGC
TTACTCTGGCTACCATCAAATACGCATGAAGGA-GTCCGACCAGGAGAAGACCTCCCTCATCACACCTTTTGGGCCCTTT
TGCTAGCATCATCATGTCATTTGGGCTCAAGAATGCCGGGGTGACATATCAGCGAATGATCCAGAAATACCTCCACGACC
AGATTGGCGTCAACGTGGAGGCCTA---TGTCGACGACGTAGTCATCAAGTCCAGACACGGCTCCAATCTCCTCTCTGAT
GTCGAACAAACATTCACAAACTTGCAAAATATTCTTGTGTCCTAAATTTTTACTAAAATTTAAATTAATTTGTAAGTAAA
ATTTGTAGTCAAAGACGTGTATTGGAGACTGAAAAGTTAAACACATCTTGTATTTCGAAATGGAGGGCTTGGCTAGGTAC
ACTGAAGTGACGTGCACATACAACATTTGACGATTGTATCGATCCACCGCTCCGGCTTGAATAGAAAGC-GTTCTTTTCA
TACATAACCGACTGATCATGAGGAAATAAGTGTGCTGATGCGCTGGACATGTAAGATGGAGATGTGCCTAACACGTCTAA
GCCGCCTTTAAAGAAAAAGGAAACCAGTCCAAGCTAGCAAGGAGTTAAACAAGTTTATCCCAA-----------ACCACG
ATAACAAAAAACAATTCATAGCTGACGCAGCAAATCCGTATATGCTTCAAGAACGGACATCTATATATAGAGTTGCTTGT
AGCTTTGGCCAGGCACAACCACAGCAAAAACCATCATTCCACGAG-CAGACGCGGGACAGTGCAGAGC--TTCC---CAG
AGAAGCTTAGGAGCAACGATGAAGAGTAGCACACTCCTGGTCATCCTGATCCTTCAGGCCGTCCTGGTCATGGGAATCCT
CTCACAGGCGAACGGTATGGTTGCTGATTGCCGTATTCTGATTTCATTGTAAT------CTTTAGCTT--ACACACACAA
GTGA--------TAGTTAACTGATGCCAATCCA---------------------GTTAACAAGGCGATTAACTGATCTGA
T--------------------------------------TCCATGCGTGCGTGCAGCCGAGTTCCCCAAGTGCTGCGACA
ACTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGATGACGCCGGCCCCAAGTGCCGGGACGGCTGCGTGAACTGCCGCGTC
GTGCAGACGAGCCCTAAGAAGACGTTCCGATGCGCCGATGCTCGCGCCGACGACGGCACGCCCTGCAAGCCCTGCAAGAA
GCACTGATCGCACATGCTCAGGACATAAGATGTTGGACCGA----AAATAAAAGCTCGCATGGGTTGAGCAGAGCAGTGG
TGGCTGTA---CGTGCCCGCGGTCCACGCCCAACAACAATTGTAGTTGTCA------TCGTC-GTCGTTATGCTTTTT--
TCTCTCTCCAGAAAAAGCTGTT-----------------------GTCATTGCTCCGTGAATAAACACATACATA-----
------------------------------------------------------------------------------TG
TATCAGTGTA-TGCGTCTCTGCTCAATTAAATAAAAATCA-GT-------------------------------------
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-------------------------------------------------------TTATTTGTGTCGATATATATTG---
-------------------------------TT-------------------------GTACAGTCCAGTTCAAATGGTG
AATGGATCCTTCTCGGC--------------------------------GCGAGTC------------------------
---------------GGGATAATTAGTGGATCAT----------------------------------------------
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----------------------------------TATTTACGCAAGTCAGGGCCATGATGTTTAAGCAT-----------
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-----------GCATGCAT-------------------------------------------------------------
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------------------------------------------------------GGTACCGATCTCATCTTGGCGGGTAT
GGAACAT------GCTAGGACTCCATTATTGAATGG--------------------------------------------
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------------------------------------------TTAGCCAGCAAATCATCTCGCGAATATGCATGCAGCAT
GCATCACGCACGTTATATA----CCAGGATACGCATCTCGTGACGTGATCTCGTCTAGCTTCTCGGTCGCTAGTTAGCTA
ACATGGAGATGCAAATATACTAGTACTACTAAGGTAGATCTCTCTTTGGTTACGACTTGAGCAATATCACCGTTCACGCG
CGAAAAAAAAACACTGAGATACGCGCTCACAGTGTCGGTCATGTAGCATGCTTGAATAAAAATGTGACACTGTTCATCCG
TCTATCCCTC-------------TTTCCCAAAGATTGAAGATGCTACAGCGATTCGGTGACGCAGATCCATCCCTCGCTG
TCCCGTCGGCACGAGCACGTGAAGAGGAGGGCCATTCATGCCTAGGCTAGGAGTACCTGCCATGGCAGCGCCAGCTCACC
CGGGGAAATATCTGGTACTCCTACCCCTAGGATGTTCCTCGTGCTTCAAAACTCGGTAGCACATTTTTAAATCTTTACTC
ATATAAAAATCTGAGTTGGTAATGATTGTGTGCCTGCCATCTTATATTTGGGATCGTCGGATCTGCATCTGACGCACAAC
ACAAAGCAATCTGTGCAATTTTACACAAAGACACC
>chr1A_1
TTGCACAATACAACCTCGACGTTCGAAAGGACGCCAGGCCAGTCAAACAAGCCCTCTGTCGTTTCGCCACAGAGAAACGA
CGGGCCATTGGTGGAGAGACTGCCCGACTCCT-GCCGCCAGGTTCAACGGG-GAAGTCACGCACCCGGAGTGGCTGGCCA
ACCCCGTCATGGTGCGGAA---AAAGAACATGTCCTGCCGCATGTGTGTTGACTAAAGTGACTTCAACAAAGTATGCACA
AAGGACTTGTTCCCTTCGCCTCGCATTGGCCAAGTTATAGATTCAACCATGGGCTGCGAAAGCATGTGTTTCTTGGATGC
TTATTTTGGCTACCATCAACTACGCATAAAAGA-GTCAGACCAAGAGAAAACTTCCTTCATCACACCTTTCGGGCCTTTT
-GCTAG-ATCACCATGCCTTTGAA-CTCAAGAATGCAGGGGTGACATATCAGCGAATGATGTGAAAATATCTCCATGACC
AGATTGGCATCAAAGTGGAGGCCTACGTCATCAACAACGTAGTCATCAAGTCCAGACGTGGCTCCAATCTCCTCTCTGAC
CTCAAACAAACATTAACAAACTTGCAAAATATCCTTGTGTCATATATTTGTACTAAAATTTAAATTATTCTATGAGTAAA
ATTTGTAGTCAAAGACGTGTATTGGAGACTGAAAAGTTAAACACATCTTGTATTTCGAAATGGAGGGCTTGGCTAGGTAC
ACTGAAGTGACGTGCACATAGAACATTTGACGATTCAATCGATCCACCGCTCCGGCGCGAATAGAAACGTGTTCTTTTCA
TACATAACCGACTGATCATGAGGAAATAAGTGTGCTGATGCGCTGGACATGGAAGATGGAGGTGTGCCTAACACGTCTAA
GCCGCCTTTAAAGAAAAAGGAAACGAGTCCAAGCTAGCAAGGAGTCAAACAAGTTTATCCCAA-----------ACCACG
ATAACAAAAAACAATTCATAGCTGACGCGGCAAGTTGGC--ATGCTTCAAGAACTGACATCTATATATAGAGTTGCTTGT
AGCTTTGGCCAGGCACAACCACAACATAAACCATCATTCCACGAG-CAGAC--GGGACAGTGCAGAGC--TTCCCTATAG
AGAAGTTTAGGAGCAACGATGAAGAGTAGGACACTCGTGGTCATCCTGGTTCTCCAGGCCGTCCTGGTCATGGGGATCCT
CTCACAGGCCAACGGTATGGTTGCTGGTTGCCGTATTGTGATTTCGTTGAGAT------ATTTAGCTTACACACACACAA
GTGA--------TAGTTAACTGATGTCAATCCA---------------------GTTAACAAGGCGATTAACTGATATGA
T--------------------------------------TCCATG--------CAGCCGAGTTCCCAAAGTGCTGCGACA
GCTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGACGACGCCGGCCCCAAGTGCCGCGACGGCTGCGTGAACTGCCGCGTC
GTGCAGACGAGCCCTAAGAAGACGTTCCGATGCGCCGATGCACGCGTCGACGATGGCACGCCCTGCAAGCCCTGCAAGAA
GTACTGATCGCTCATGCTCAGAACATCAGATGTTGCGCCGA----AAATAAAAGCTGGGATGAGTTGAGCAGAGCCGTTA
TGGCTGTA---CGTGCACGTGTTCCACGCCCAACAACAATTGTTGTTATCA------TCGTC-GTCGTTATGCTTTTCTC
TCTCTCTCCAGAAAAAGCTGTT-----------------------GTCGCTGCTCCGTGAATAAATCACATAAGTATGTA
TCACA--------------------------------------------------------------------------G
TATCAGTGTA-TGCGTCTCTGCTCAATCAAATAAAAATCA-GT-------------------------------------
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-------------------------------------------------------TTATTTGTGTCAATATAT-TTG---
-------------------------------TT-------------------------GTACCGCCCAGTTCAAATGGTG
AACCGATCCTTCTCGGTGCTCAAGCGTACGTACGGCCGTCACACTCGGCGCGAGTCGGGATAATT---------------
-------------------------------CAT----------------------------------------------
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----------------------------------TATTTACGCAAGTCAGGGCCATGATGTTTAAGCAT-----------
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-----------GCATGCATGGTACCGATCTCATCTTTCTTTTTTGAATACGATACAGACGTAGGCGCTCATATACACGCG
TATACACTCATCCTTATAAACACACACGCACACCCTATCCTTATAAGCACCTTCGAAAGACTGAGCCGACATATCATTTT
GAAATTTACGAGTCATCGTAGGCATCTCGTCGTCAACGGAAACGTCTCCTCCCATTGAATGCGCATCGCCGAAAATACTG
AAATAAATTCAGAAATAAATATGAGCATCAGGACTTAGAACCCTGATGGACTGGGGTACCGATCTCATCTTGGCGGGTAT
GGAACATGCACATGCTAGGACTCCATTATTGAATGG--------------------------------------------
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------------------------------------------TTAGCCAGCCAATCATCTCGCGAATATGCATGCATCAT
GCATCACGCACGTTACATA----CCAGGATACGCATCTCGT-----GATTTCGTCTAGCTTGTCGGTCGCTAGTTAGCTA
ACATGGAGATACAAATATACTAGTACTACTAAGGTAGATCTCTCTTTGGTTATGACTTGAGCAATATCACCGTTTACCAG
GGCATGT-AAACACTGAGCTACGAGCT--CAGTGTCGGTCATGCAGCATGCTTGAATAAAAACGTGACACTGTTCATCGG
TCTATCCCTCCCTCACAGGTCTGTTTCCTAAAGATTGAGGATGGTGCAGCGACTCGGTGACGCAGATCCATCCCTCGCTG
TCCCGTCGGCACGAGCACGTGAAGAGGAGGGCCATTCATGCCTG-----GGAGTACCCGCCATGGCAGCATTAGCTCCCC
CGG-----------------------------------------------------------------------------
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-----------------------------------
>chr1B_1
TTGCACAACACAACCTGGACGTTCGGAAGGACGCCAGGCCAGTCAAACAAGCCCTATGTCCCTTCGCCACATAGAAACGA
CAGGT-----GTGAGGAGATCCCCCGACTTCTAGCCGCCAGATTCATCAGG-GAAGTCACGCACTCGGAGTGGCTGGCCA
ATCCCGTCATGGTGCGGAA---AAAGAACATGTTCTGCCGCATGTGTGTTGACTAAACTGACCTCAACAAAGTATGTCCA
AAGGACTTATTTCCGCCACCTCTCATCGACCAAGTTATATATTCAACATTGGGATGTGAACCCATGTGCTTCTTGGATGC
TTACTCTGGCTATCATTTAATACGCATGAAGGACGTCCGACAAGGAGAAGACCTCCTTCATCACACCTTTCCGGCCCTTT
TGCAAG-ATCACCATGCCCTTTGGGCTCAAGAATGCCGGGGTGACATATCAGCGAATGATGCAGAAATACCTCCACGACC
AGATTGGGGCCAACGTGGAGGCCTA---CATCAACAACGTTGTCATCAAGTCCAGACGCCGCTCCAATCTCCTCTCTGAC
GTCGAAAAAACATTCACAAACTTGCAAAATATTCTTGTGTCATATATTTTTACTAAAAATT-AAATATTTTATAAGTAAA
ATTTGTAGTCAAAGACGTGTATTGGAGACTGAAAAGTTAAACACATCTTGTATTTCGAAATGAAGGGCTTGGCTAGGTAC
ACTGAAGTAGCGTGCACATAGAACATTTGACGATTCTGTCGATCCACCGCTCCGGCGCGAATAGAAAGA-GTTCTTTTCA
TACATAACCGACTGATCATGAGGAAATAAGTGTGCTGATGCGCTGGACATGGAAGATGGAGATGTGCCTAACACGTCTAA
GCCGCCTTTAAAGAAAAAGGAAACGAGTCCAAGCTAGCAAGGAGTCAAACAAGATTATCCCAA-----------ACCTCA
ATAACAAAAAACAATTCATAGCTGACGCATCAAATTGGC--ATGCTTCAAGAACGGACATCTATATATAGAGTTGCTTGT
AGCTTTGGCCAGGCACAACCACAACATAAATCATC---------------------------------------------
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-----------------------------------
>chr3B_5
----ACAACACAATGTAGACGCCCGGAAAGATGACTTGCCAGTCAAGCAAGCTCTCTGCCGCTTCTCTACGAAGAAGAGG
A--GCCATTGGTTAGGAGATCGCCTGACTCCT-GGCTCTCGGTTTCATTAGAGAAGTAGCACATCCAGAGTGGCTCGCTA
ATCCCATCATGGCACACAAGAGAAAAAATATGTCCTGGCGCATGTGTGTTGACTACACTGACATCAACAACGCATGCCGG
AATGACCCGTCCCTTATGCCTCACATCGCCCAAGTGATAGATTCCACCGCTGATTGCGAGCGCTTGTGTTTTTTGGACAC
TTACTCTTGCTACCATCAAATACGCATGAAGGA-GTCCGACCAAGAGAATACCTCCTTCATCACACCCTTTGGGCCCCTC
TTCTAT-ATAACTATGCACTTCGGGCTCATGAATGTCACAACAGCGTATTAGTGGATGATGCAAAAGTGTCTCCAGGAAC
AGATTGGTGTCAACATTGAGGCCTACGTC---GATGAGATAGTCATCAAATCCATGCACGG-------------------
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>chr1D_897
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-------------------------AGTCCAAGCTAGCCAGGAGTCAAACAAGTTTATCCCAAGCACCTA-CCCACCACG
ATC-------ACAATGTATAGCTGACGCAGCAAATTGGC--ATGTTTCAAGAACGGGCACCTATATATAGAGTTGCTTGT
AGCTCTGGGTACACAAAACTACAGCATAAACCATCATT---------AGAC--AGGACAAGCCAATTGCTTTGC---TCG
ACAAGTGTAGAAGCAACGATGAAGAGTAGCACGCTCGTGGCGATCCTGATTCTCCAGGCCGTCCTGGTCATGGGAATCCT
CTCACAGGCGAACGGTACG--TGCTGATTGCCTTTTTGTA-TGGCGTGCAGAGTTTAGCTT---------------AAAA
GGGATATCAAATTAGTTAATCACCTTACAAGACCATCCCTTTTGACATGCATTTGTTACCAAATGAACTAATTTGTTTGA
TTGCACCCCCGCAAAAAAAAACTATTTTGATTGCATGTGTCCGTG--------CAGCCGAGTTCCCAAAATGCTGCGACA
ACTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGACGACGCCGGCCCCAAGTGCCGCGACGGCTGCGTGAACTGCCGCGTC
GTGGAGACGAGCCCCAAGATGACGTTCCGGTGCGCCGATGCGCGCGGCGACGACGGCACGCCCTGCCCGCCCTGCAAGAA
GTACTGATCGCGCATGCTCGGAACATAAGATGTTGCGCCGA----A----AAAACTCGGATGGGTTGAGCAGAGCCGTTG
TGGTTGTA---CGTGCACGTGGTCCACGCCCAACAACAATTGTTGTTGTTG------TCCTC-GTCGTTATCTTTTCT--
TCTTCTTCAGAAAAAACCTGTTTTTTTTTGCGAATAGAAAAACCTGTTGTTGCTCCGTGAATAAGCACT-----------
------------------------------------------------------------------------------TG
TATCAATTTA-TGCCTCTCTGCTCAATCAAATAAAATATTTGT-------------------------------------
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-------------------------------------------------------TTATTTGTGTCAATATAT-TTG---
-------------------------------TACTGTCCAGTTCCGAGT--AAAAAAAGTACTGTCCAGTTCCAATGGTG
GATAGATCCTTCTCGGTGTTCAAGCGTACGTACGGTCGTCACACTCGGTGCGAGTCGGGCTAACAAGGGGGTCATTTTCT
CTATAAAAAATCAAGGGGATCATTAATTTACGCAAGTCAGAGGGTAGTAGCGGGTACTCCAGTA----------------
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------------T------ATTCCATTACTGACTACTCTCTCCGTTCCTAAATATAAGTCTTTGTAAAAATTTCACTACG
AACCACATACGGATGTATGTAGATGCATTTTAGATTACAGATTCACTCATTTTGCTCCGTATGTAGTTCATAGTAGAATC
TCTACAAAGACTTATATTTAGAAACGAAAGGAGTAGTTTGTTTTAGCCAACCAATCATCTCGTGAATATGCATGCAGCAT
GCATCACGCACGTTA--------CCAGGATACGCGTCTCGC-----GATCTCGTCTAGCTTGTCGGT-------------
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-----------------------------------
>chr1A_898
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--------------------------GTCCAAGCTAGCCAGGAGTCAAACAAGTTTATCCCAAGCACCTACCCCACCACG
ATC-------ACAATGTATAGCTGACGCAGCAAATTGGC--ATGTTTCAAGAACGGGCACCTATATATAGAGTTGCTTGT
AGCTCTGGCTAGACACATCTACAGCATAAACCATCATTCTACGGG-TAGAC--AGGACAAGGCGAGAACTTTGC---TAG
AGAAGTGTAGAAGCAACAATGAAGAGTAGCACGCTCGTGGCGATCCTGATTCTCCAGGCCGTCCTGGTCATGGGAATCCT
CTCACAAGCGAACGGTACG--TGCTGATTGCCTTTTTGTA-TGGCGTGGAGATTTTAGC---------------------
----------------------------------------TTTGACATGCATTTGTTATCAAATGTACTAA----TTTGA
TTGCACCCCCGCAAAAAAAATAAAAATTGATTGCATGTGTCCGTG--------CAGCCGAGTTCCCGAAGTGCTGCGACA
ACTGTAGGTTCTTCTCGGGGGCCGTGGTCTGTGACGACGCCGGCCCCAAGTGCCGCGACGGCTGCGTGAACTGCCGCGTC
GTGCAGACGAGCCCCACGAAGACGTTCCGGTGCGCCGATGCACGCGGCGACGACGGCACGCCCTGCCCGCCCTGCAAGAA
GTACTGATCGCTCATGTTCA----ATAAGATGTTGTGCCGA----TAATAAAAGCTCAGATGGGTTGAGCGGAGCTGTTG
TGGTTGTA---CGTGCACGTGGTCCACGCCCAACAACAATTGTTGTTGTTG------TCCTCAGTCTTTATCTTTTCT--
TCTTCTTA---------------------------AGAAAAACCTGTTGTTGCTCCGTGGATAAGCTCT-----------
------------------------------------------------------------------------------TG
TATCAGTTTA-TGCATTTCTGCTCAATCAAATAAAATATTTGTCATACCTCCTCTCGCCTCTCGTGTCGCCTCCCTCACG
GACGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC
TAGTGACTCCTCCTGTGCCCGTCCTCCCCTCCACCGCCGCAGGTGGTCGGCGCCGGGCTAAGCCCGTGCGTGCGACACGG
TGGCGGAGGCCTCTCCCCTCTCTCCCGGATCCATGGGTGGCGCGGGTGCCCAGATCCGTGGAGGTCCGGCCCCCACGGCG
GCGCGGCGGCCCAGCGGCGGTGCCTATGGTGCTGCCGATGGGAATCGGCCGGCTGCAAGGGGCGCCGGTGGCCGGGGCGG
CGACCCCATGGCTGGATGGCAGCGCGCCCATTGGTCCGTCCGGTTTCGTCCCATCCCGGATCTGGTGACTACCGGACGGC
CTGGGGGTTGGCGGCGGCCCGGCGTGGCTGGCGATCTGGACGCGGTGGTGTCGGCGGCTCGCTGGTCTGCCGGAGCTCCA
GGGGTATCATAGTCTCCGACTCGATCTGCTCCAGTTTGTGCTAGCTCCGGTATAGGGAGACTGTCGTCATCTCCCGATGC
TCGCTGCATGGATCTGGCGGCGACAGCTAGATCCTTTTGGTTTAGTCTCCAACGGAGAAGACGGCGGTCCGTGCACAAGA
AGCTGGATGGAGTTTTTCGAACAAATCTGAGTGAAAACCTGCTCTTGGCTAGATGCCAAAGCTGGCGGTGGCGGCGCTCT
ACGGTGTCGTTTTCTTCTTAAAGGCATCGCCATGGAGAAGTTCTAGACTACTATCTGCTACCTCCGGGGAAAACCCTAAA
TCAATAGATCGGAAGACGGCGGCGCGATTGTGTTGTTTTCCCCTTGGGGGCGTCTTTCTTGTAGGTGTACGCGGACTCGA
GGGACCAGTGAACGACGTCTTTGATGGAGCGGTGCTTCAACATACACATTGATGGTGACAAATCTTGATGGCATGGCACC
CTGGAGATTAGGCGTCTGATGTGCGATGATGGACTCGCACAGGAGGATGACGATGTCTGGCGTCGTGGTGATGTCGACGG
CAGCTAGACCGAAAAAGGTAGATGCAGCAGTACAACTCTGAAGATGGATTTATGGCAGGTGGCGGCGGCGGCCTGTGAAT
GTGAGCCGGACCGGTGGGTGCTTCATACTCGGCAGGCGTCCTGGTTGGAGTCTCAGGTCTTAGATGTTAGGTTTGGCTGC
GAGGTCTGTTTGGTATTAAGCCCAGACTATCAGCATCTCTTCATCAACTGGATAGGAGTAGCGACAGATGTTGACTAGAC
GGTGGCTTTAGTCTTATTGTTGTATTAGTTTATAAGATCTTGTGTGAATAATTAATAAAGTGGCTGCATGCATCACCCAG
ATGCAGAGGCTAAGGTCTTTCTCCTTTTTCAAAAAAGTAAAAATAAAATATTTGCTTATTTGTGTTAATATAT-TTG---
-------------------------------TACTGTCCAGTTCCGAGAAAAAGAAAGGCACTGTCCAGTTCCAATGGTG
CATGGATCTTTCTCGGTGTTCAAGCGTATGTACGGTCGTCACACTCGGTGCGAGTCGGGCTAACAAGGGA-TCATTTTCT
TAAAGAAAAAACAAGGGGGTCATTAATTTACGCAAGTCAGAGGGTAGTAGCGGGTACTCCAGTA----------------
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------------T------ACTCCATTACTGAATAG--------------------------------------------
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------------------------------------------TTAGCCAGCCAATCATCTCGTGAATATGCATGCAGCAT
GCATCACGCACGTTACCAGGGGTCCAGGATACGCGTCTCGT-----GATATCGTCTAGCTTGTCGGT-------------
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-----------------------------------
>chr1B_898
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--------------------------GTCCAAGCTAGCCAGGAGTCAAACAAGTTTATCCCAAGCACCTA-CCCACCACG
ATC-------ACAATGTATAGCTGACGCAGCAAATTGGC--ATGTTTCAAGAATGGACACCTATATATAGAGTTGCTTGC
AGCTCTGGCTTGGCACAGCTACAGCATAAACCATCATTCTACGGAATAGAC--AGGACAAGGTGAGAGCTTTGC---TAG
AGAAGTGTAGAAGCGACGATGAAGAGTAGCACGCTCGTGGCGATCCTGATTCTCCAGGCCGTCCTGGTCATGGGAATCCT
CTCACAGGCGAACGGTACG--TGCTGATTGCCTTTTTGTAGTGGCATGGAGATCTTAGCTT---------------ACAA
GTGA--------CACTTAACTGATGGCAATCTA---------------------GTTAACAAGATGGTCTTGTAAGGTGA
TT-----------------AACTAATTTGATTGCGTGTATGCGTG--------CAGCCGAGTTCCCGAAATGCTGCGACA
ACTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGACGACGCCGGCCCCAAGTGCCGCGACGGCTGCGCGAACTGCCGCGTC
GTGGAGACGAGCCCCAAGAAGACGTTCCGGTGCGCCGATGCGCGAGGCGACGACGGCACGCCCTGCCCGCCCTGTAAGAA
GTACTGATCGCACATGCTCAGAAATTAAGATGTTGCGCCGAAAATA----AAAACTCGGATGGGTTGAGCAGAGCCGTTG
TGGTTGTAGTACGTGCACGTGGTCCACGCCCAACAACAATTGTTGTTTTTGCTGTTGTCCTC-GTCGTTATCTTTTCT--
TCTTCTTA---------------------------AGAAAAACCTGTTGTTGCTCCGTGAATAAGCGCT-----------
------------------------------------------------------------------------------TG
TATCAGTTTA-TGCGTTGCTGCTCAATCAAATAAAACATTTGT-------------------------------------
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-------------------------------------------------------TTATTTGTGTCAATATAT-------
-------------------------------TT-------------------------ATAATGTTCATTTCCAATGGTG
CATGGATCCTTCTCGG----------------------------------------------------------------
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-----------------------------------
>chr1B_1045
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------------------------CATAAATCATCCTTCCACGAGACACGG------CAGTGCAGAGC--CTCCATATAG
AGAAGTTTAGGAGCAACGATGAAGAGTAGCACACTCGTGGTCATCCTGGTCCTCCAGGCCGTCCTGGTCATGGGAATCCT
CTCACAGGCGAACGGTATGGTTGCTGATTGCCGTATTGTGATTTCGTTGAGATCCTTAGCTTTACATT--ACACACACAA
TTGA--------TAGTTAACCGATGCGAATCCA---------------------GTTAACAAGGCGATTAACTGATTTGA
T--------------------------------------TCCATG--------CAGCCGAGTTCCCCAAGTGCTGCGACA
ACTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGACGACGCCGGCCCCAAGTGCCGCGACGGGTGCGTGAACTGCCGCGTC
GTGCAGACGAGCCCTAAGAAGACGTTCCGATGCGCCGATGCACGCGTCGACGACGGCACGCCCTGCAAGCCCTGCAAGAA
GCACTGATCGCACATGCTCAGAACATAAGATGTTGCACCGAGAATA----AAAGCTCGGATGGGTTGAGCAGAGCCGTTG
TGGTTG---TACGTACACGTGTTCCATGCCCAACAACAATTGTTGTTGTCA------TCGTC-GTCGTTATGCTTTTA--
TCTCTCTCCAGAAAAAGCTGTG-----------------------GTCGTTGCTCCCTGAATAAACACATATTCCCTTTG
TTTCATAATGTAAGACATTTTTTGGCACTAGTGTAGTATCAAAAAACGTCTTATATTATGGGACGGATGGAGTACTTGTG
TGTCAGTGTATTGCGTCTCTGCTCAATCAAATAAAAATCA-GT-------------------------------------
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-------------------------------------------------------TTATTTGTGTCAATGTTTATTTGTG
TCAATATATTTGTTAAGATAGCACAAATATATT-------------------------GTACTGTCCAGTTCAAATGGTG
AATGGATCCTTCTCGGTGCTCAAGCGTACGTACGGTCGTCACACTTGGTGCGTGTC------------------------
---------------GGGATCATTAATTTACGCAAGTCACCCCAAAAAAAACTTTGTTCGTTCCTAAATATTTGTCTTAT
TACAGATATGGATATATATAGACATATTTTAGAGTGTAGATTCACTCATTTTTGCTCCGTATGTAGTCATTTCTTAAAAT
CTGTAAAATGACAAATATTTAAAAATGGAGGGAGTAATTACGCAAGTTAGGGGTATGATATTTAAGCATCTACACCTCCC
GAGTCACGATACGCTCCTGCCTCCTCCCGAGCCGCCCCTGTGTGGCGGCCGGGAGGCTCCAGATCCAATCGCCCGACCTC
CCCTTCTCCTCTTCCTCCTCCCTCGCCGCCGCCTGAGGGCGCGGCAGGGCGAAGCCTTGCCATCGCCGGCGGCGGCGGGG
ACTCGGGGCCCTCCCGCTCGTGAGGGGCTGGCGCGGGCCGGCGCCCCCGGGCCGAAGCGTGGTGTTCGGCCGGACGTCAC
GGCAGGGAATGGCGGCTCTCCGGTGATTCCATACCTCCACGGCAGTCGGCTTCAAGGTCTGGGGCGTCGCGGTCGTTAGG
GACGGCAGCGGCGCGACCGGATCGGTGGCGGCGCGGCCGGATCAGGGCCCAGGCGTGGGCTTGGTCTCCGGGTCGCAGGC
GATGGCGGGTGCGGCATGTCGGCAGCTTTACGGATCTGCAGATTCCATCCTTGTTTGGTCCTTAACGGCGCGGGCAACTC
CGGGGAAACCCTAGATCTCCTTGGGATCGAGCGATGGCGGTGTTTTTGCGTCGTAGTCCCTCTTCAGGGCATCGTTTTGG
AGTTTGCTATGGTTGAAGGGACCAGCGACGCCGATGGCGCACGCCCGGTGGTGCAAGTGCCGATGAAAATCGCGTTGACT
ACGGTCATGACGGACGATGGCAGCGTCTTTGATGTCGTTTCCTTGTCAAGGCATCGTCGTTGCAGTTTGCGTCATCAGGC
TCGGGATGCTCCGGGAGAAACCTTAGATCTGGGTCTTCCGGATCAGACGATGATGGTGTTCTCTGTATCACATTCCCTCA
TGGGGGCATCGTTTTGGAGCAAGTGATGGATGGAGGTGGCAAGAGGAGGAGCGGTGTTACATCTACCGCAAGGCCGGCGA
CGGATCACGGCGGCATGGCGCTGCGGAGTTTCGGCGATGGGCGTGCGTGGATGGACACGCACAGGATGGTGGCGTTGTCT
GGCGTCGTGGTGGTGTCGACGGCAAGCCTAGCAAGGTTGATGCAGCAGTACAACACTGAAGATGGATTGGCAGCAGGTGG
CGACGGCGGCCTCATACCCGGCAGGCGTCCTGGTTGAGGAGTGCGCCGGACTTGTGGGTGCCCATACCCGGCAGGTGTCC
TGGTTGGGACCTCAGGTCTTAAATGTTAGGTTTGGTTGCGAGTTTTGTTTGGTATTAGGCCCAGATTATCAGCATTCCTT
CATCAACTGGATAGGAGTAACGATAGTTGTTGTCTAGACAGTAGCTTTAGTCTTAGTGTTATATGACTTTGTAAGGTCTT
ATGTGAATAATTAATAAAATGGTTGCATACATCGTCCAGATGCAGAGGCCGGGGTCTTCCTCCTTTTTCTAAAAAAAAGA
TATTTAAGCATGCATGCATG------------------------------------------------------------
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----------------------------------------------------------CCGATCTCATCTTGTCGGGTAT
GGAACATGCTAGT------ATTCCATTA----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CATCTCGCGAATATGCATGCAGCAT
GCATCACGGACGTTATATA----GCAGGATACGCATCTCGT-----GATCTCGTCTAGCTTGTCGGTCGCTAGTTAGCTA
ACATGGAGATGCAAATATACTAG---TACTAAGGTAGATCTCTCTTAGG-TATGACTTGAGCAATATCACCGTTCACCAG
GGCATGT-AAACACTGAGCTGCGCGCTCACAGTGTCGGTCATGCAGCATGTTTGAA------------------------
---------------------------------------GACGGTGCAGCGAATCGGTGACCCAGATCCATCCCTCGCTG
TCCCGTCGGCACCAGCACGTGAAGAGGAGGGCCATTCA------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------
>SNPs
----------------------S-------------S--S-----------------------S-----S----------
---------------------------------S---S-S-------------------------S------S-------
----SS----------------------------S--S----------------S-----S--S----------------
------------------------------S-------------------------------------------------
--------------------------------------------------------S-----------------------
------S----S----S-S-----------------------------------------S-------------------
----------------------------SS-------------------------------------------------S
-----------------------------------------S--S----------------------S---S--------
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--------------------S--------------S--------------------SS----------S-----------
---------------------------------------------------S----------------------------
------------------------S--------------------S----------------------------------
-----------------------------------SS-SSS---------------------------------------
--------------------------S------------------------SS------------------------S--
-----S------------------------------S----------------S--------------------------
-------------------------------------S-----------SS-----------------------------
----------------------------------------------------------------------------S---
---------------------------------------------SSSSSSSS---------------------------
----------------------------------S--------------------S------------------------
-----------------------------------------S----S---------------------------------
---------------------S-------------S----------------------S----------------S--S-
----------------S--S-----------------------S------------------------------------
------------------------------------------------S----------------------S-SS-----
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---------------------------S----------------------------------------------------
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------------------------------------------------------------------S-------------
--------------------------------------------------------------S-----------------
----------------S---------------------------------------------------------------
--------------------S----S-SS-S-------------------------------------------------
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---------------------------------------------------S----------------------------
-----------------------------------------SSSSS---------------S------------------
----------------------------------------------------S------------------------SS-
S-S-SSSS----------S------------------------S------------------S---------------S-
----------------------------S---------S----S-S------S---------------------------
-------------------------------------------SSSSSS--------S-----------SSS-----S--
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_23
---CACAACACAACCTCGACGTG---------------------------------------------------------
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>reverse_1659
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----------------------------------------------------------CATGGGTTGAGCAGAGCAGT--
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-----------------------------------
