>input_sequence_76770
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----------------------ATGCAGATGAACAACAAGGAGCCGGCCGCCGACGGCAAGACGCCGGTTACCATCTGCA
GCAGGCTTCAAAGAGCCTTCCACGCTCGGCCGGTCTTCGGGCCTCTTCGCCGCCTCACGGGCCAACCCCATGACGGCGGA
GCTGCCGCTACCGGCGTACCCTCGGGAGCGCCTGCCGCGACGCACGGTGGTGCACCGCCACCGACTGTATTGCCGGCACG
TGCACCGGCGCCGTCTCCAGTAGGCAAAGCTCCGGCACCTAAGGCGGCACCGGTGATCCTGCCCGCGGTGCCACAGAAAC
CGGCTGCTGCCAAGGGAGGTGGCAAGCCTGGGCAGGTCCTCGGGAGCACTCCTACCGTCGCTGCAACCACGAGCAAGGTT
CCCGAGAAGGCGGCAGGGGGGATCCCGGTACCGGTGCCACCGCCGGCGGTCATGGCTGGAAGGCCGGCAGCGGACGCGAA
GGCTGGGGACAACAAGGCGCAGCAGACAAAGGGGAAGATCAGGGTGAGCTCCAGGGTCCGCAAGGCCTTGGCCTCATCCA
AGTAG---------------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G378700
AATTATGACAACTTTTGGCCCAAGAAAAAGTCA-CGAAACATGTTAATATTGTATTTAGGTTTGAAGATCTCGTCGAGAC
GGATTTAATGTTGAAAATGTATTTTTAATCGGAATTTTTATTTAAGAGA---AATATTTTTAAGTCTGAAAAACCAAAAG
GATTTCGCTAATGTCATCTGTTTGATGTGGCAAAATGGATAGTAATGAGGAAGCTTGAATCATATTACTTTATGCCACAC
GTGTGGCACTTATCATTCGGGCTAATTAATATACGAGATAAATCTTTTGTCTCCATTTAAAAAAGG---AAGAAAAGGAT
A-TCGATGACATGCTAGATAGTCATCAATTAAGCTCCCACAAAATGTTGGCATGTGGTGGTCCAAGGCTTTGGGCA----
-----------CATGTAAGTGGGTGCCTCATAGGTGCAGCGTTTTAGGCCCACTAGCAGCCAATTCTGATGGTCGTAACC
CAGTCTCATCTTTCTACCCCCTTTCTTCTGTTGT-TTC----------------------------CTCCTCAATCTGCT
TTAGAGCATCTATAGCTGAACCTGACGAATTCGACCCTTTAAACGTCCGCAGATGCATGCGGCGTGATCTTGGACAGCGA
CGGACGGCCCCTCAAATGTCCTATTGAACAATCACACTCCTTAACCCTCAAATTCATGTACGTTGATCATATAGTACAAA
TTCATCACAATTAAGTCCATACAAAAACGAGC--CAAAAGCTAGCCAAATTTAGTGGTCTATATCCGCAACACTATTAAG
GACCGTTCATCTGCGCGGCAAAGCGCGCCTTTCCATCTAGA---ATTCCCGAGGAATATGATACCCGTCTCTCGTCGGCT
CATCTGTTGAGTTTGTGCGCGGAGCATCTCATCTGACGGAAAGCCAAGATGTAGCGAAATGCGTCCCCATCTCTTTCACT
TCACCAGGAAGCTGAGTATAGATCATTTGCCTATATACAAAGCGCAGTTTGTTTCTCCACTTCGCAGCATCCGAAGTTTG
TCT-----TTCGTACAGCAGTGATGCAGATGAACAACAAGGAGCCGGCCGCCGACGGCAAGACGCCGGTTACCATCTGCA
GCAGGCTTCAAAGAGCCTTCCACGCTCGGCCGGTCTTCGGGCCTCTTCGCCGCCTCACGGGCCAACCCCATGACGGCGGA
GCTGCCGCTACCGGCGTACCCTCGGGAGCGCCTGCCGCGACGCACGGTGGTGCACCGCCACCGACTGTATTGCCGGCACG
TGCACCGGCGCCGTCTCCAGTAGGCAAAGCTCCGGCACCTAAGGCGGCACCGGTGATCCTGCCCGCGGTGCCACAGAAAC
CGGCTGCTGCCAAGGGAGGTGGCAAGCCTGGGCAGGTCCTCGGGAGCACTCCTACCGTCGCTGCAACCACGAGCAAGGTT
CCCGAGAAGGCGGCAGGGGGGATCCCGGTACCGGTGCCACCGCCGGCGGTCATGGCTGGAAGGCCGGCAGCGGACGCGAA
GGCTGGGGACAACAAGGCGCAGCAGACAAAGGGGAAGATCAGGGTGAGCTCCAGGGTCCGCAAGGCCTTGGCCTCATCCA
AGTAGAGGCATGATCAACTGAATCGCCAGGGTGCGCGCCAAGAACGGAGCTAGCTGAATTACGCATCTCCAACGCCATTC
TCTTTTACCAGTGTGCTGTTTTTTATTTACCGATTTT-GAGCTAGGCTCTCCGTTCTGCTGTAACTCCAGATTTTCTAT-
CTTGTTGATGGATTATCACTTGGGGGATCACCAGGAGGGAAACTCACACAAACTGGGCCAGATTGTACCGGAAATGATAT
TCTTGGCTCGAG-TTCGTTGATGCTACACATCACATATATCTATTTATTTTGCAACTCGGAAAAAAAAGA----------
--------------GGATCTATTTATTGCGCTTTTATTATACTATCCTTCGCCGAACTGCAAGGCCCTCGAAATTGAGGC
AGCTCTTGGAGGCTTGCAGGGATATATACCGTGTGTTGCTTCTGAACTTTTGATAGGTTGGTTCT---------------
-----------GAACTTCTGATAGGTGATCAGCATTACAACTTCTCGATTTGCTGAATGATCAGGTCTCTCTCCTCGTCA
AATTCATCTTCGCCTGTAAAATGGAACAA-AAAAT-TTACATACACGAGTTTTTGTGGTGGTTGACATCATGGCTTCAAG
TCTAAACTCAAATCAACCACAGGC-AGGTTTCCTGACTACT-TATCATTCTTTTTCAATTTCAAGCTGGTCTGTGATGGG
TTCCAAGATGGGAACTTCACAGCACTACCTTTA-----------------------------------------------
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--------------------------CTTGCAATAAGATTGTGGAGTAGTTTCAACAATTCTTTGCGATTGTCTCGCAAA
GCTTCAATAATACCACG-------AGGCTTGTTTGGATTGGCAACGAACACCTAATTCCGCACAGGGAAATGGACCAAAA
AAATTTGTTAGAAGGAATTTGTTTGACGGGGAAATACAGTGTACGTGCACTTG----AAGATGGTACCTTAAAAACGTGG
AAGGCACATATTTTGATATTTTTGCTTGAATCCTACAAAGGATGCTGGTTAGTAGTAACACTCCCACAAATAGATAGGAT
CTGTACATACATAATATTTAATAATA
>chr3A_1
AATCATGGCAACTTTTGGCCCAAGAAAAAGTCATCGAAACATGTTAATATTGTATTTAGTTTTGGAGATCTCGTCTAGAC
GGATTTAATGTTGAAAATTTA-TTTTAATCGGATTTTTTATTTAAGAGATAAAATATCTGTAAGTCTGAAAAACCAAAAA
GATTTCGCTGATGTCATTTG-TTAATGTGGTAAAATGGATAGTAATGATGATGTTTGAATCATATTGCTTTGTGCCACAC
ATGTGGCACTTATCATTTGGGCTAATTAATATACGAGGCAAATATTTTGTGTCCATTTGAAAAAGA---AAGAAAAGGAT
ATTCGATGACATGCTAGATAGTCATGAGTTAAGCTCCCACAAAATGTTGGCATGTGGTGGCCCAAGGCTTTGGGCAACTT
TGGTGGCCTCACATGTAAGTGGGTGTCTCGTAGGTGCAGCGTTTTAGTCCCACTAGCAGCCAATTCTGCTAGTCGTAACC
CAGTCTCATCTTTTTGCACCTTTTTTTTCGTTGTGTTC----------------------------CTACTCAATCTGCT
TTAGAGCATCTATAGCCGAACCTGGCAAATTCGACCACTTAAACGTCCACGGATGCATAGGACGTGATCTTAGACAGCGA
TGGACGGCCCCTCAAATATCCTATTGAACAATCACACTCCTTAACCCTCAAGCTCATGTACGTTGATCATATAGTGCAAA
TTTATCACAATTAAGTCCATAC-AAAACGAGC--CAAAAGCTAGCCAAATTTAGTGGTCTATATCCGCAACACTATTAAG
GACCGTTCATCTGCGCGGCAAAGCGCGCCTTTCCATCTACTAGTATTCCCGAGGAATATGATACCCGTCTCTCGTCGGCT
CATCATTTGAGTTCGTGTGCGGAGCATCTCATCTGACGGAAAGCGAAGATGTAGGGAAATGCGTCCCCATCTCTCTCACT
TCACCAGGAAGCTGAGTATATGTCATTTGCCTATATATGAAGCACAG-TTCTTTCTCCACTTCGCTGCATCCGAAGTTTG
TCCT-----TCGTACAGCAGTGATGCAGATGAACAACAAGGAGCCGGCCGCCGACGGCAAGTCGCCGACTACCATCTGTA
GCAGGCTTCAGAGAGCCTTCCACGCCCGGCCGGTCTTCGGGCCTCTTCGCCGCCTCACGGGCCAACCCCACGACGGCGGA
GCTGCCGCTACCGGCGTACCGGGGGGAGCGCCTGCCGCGACGCACGGTGCTGCACCGCCACCGGTTGTATTGCCGGCACG
TGCACCGGCGCCGTCTCCAGTAGGCAAAGCTCCCGCACCTAAGGCGGCACCGGCGATCGTGCCAGCGGCGCCCCAGAAAC
CGGCTGCTGCCAAGGGAGGTGGCAAGCCTGGGCAGGTCCTCGGGAGCACTTCTACCGTCGCGGCAACCACGAGCAAGGTT
CCCGAGAAGGCGGCAGGGGGGATCCCGGTTCCGGTGCCACCGCCGGCGGTCATGGCTGGAAGGCCGGCAGCGGACGCGAA
GGCTGGGGACAACAAGGCGCAGCAGACAAAGGGGAAGATCAGGGTGAGCTCCAGGGTCCGCAAGGCCTTAGCCTCATCCA
AGTAGAGGGATGATCAACTGAATCGCCAGGGTGCGCGCCAAGAACGGAGCTAGCTGAATTACGCATCTCCAAAGCCATTC
TCTGTTACCAGTGTACTGTTTTTTATTTACCGATTTT-GAGCTAGGCTCTCCGTTCTGCTGTAACTTCAGATTTTCT-T-
CTTGTTGATGGATTATCACTTGGGGGATCACCAGGAGGGAAAGTCACAGAAACTGGGCCGGATTGTACCAGCAATAATAT
TCTTGGCTCGAG-TTCTTTGATGCTACACATCATATAAAAAAAGCTTTGTCT---AAAAAATCACATAAAAAAGCTCACT
CGAGAACGAATAGCGGATATATTTATTGTGACTTTATTATACCATCCTTCGCCGAACTGCAATGTCCTCCAAATTGACGC
AGCTCTTGGAGGCTTA-AGG------------GTGTTGGTTCTGAACTTTTGATAGGTTTGTTCTGAACTTCTGATATGC
CAAACAAGTCAGAACTTCTGATAGGTGATCAGCATTACAACTTCTCGATTCGCTGAATGATCAGGTCTCTCTCCTCGTCA
AGTTCATCTTCACCTGTAAGATGGAACAA-AAAAAATTACATATGCGGGTTTTTGTGGTGGTTGACATCATGGCTTCAAG
TCTAAACTCAGAACAACCAGAAGC-GGGTTTCCTGACTACTCCATCCTTCTTTTGCAATTTTAAGCTGGTCTGTAATGGG
CTCTAAGATGGAAACTTCACAGCACTACCTTTA-----------------------------------------------
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--------------------------CTTGCAGGAAGATCGTGGAGTAGTTTCAACAATTCTTTGCGATTGTCTCGTAAA
GCTTCAATAATACCAGG-------AGGCTTGTTTGGATTGGCAACGAACACCTAATTCCACACAGGGAAATGGACCAACA
AAAATTGTTACAAGGAATTTGTTTGACGGGGAAATACAGTGTACGTGCACTTG----AAGATGGTACCTTAAAAACGTGG
AAGGCACATATTTTGATATTTTTGCTTGAATCCTACAAAGGATGCCGGTTAGTAGTAACACTCCTACAAATAGATAGGAT
CTGTACATACATAATATTTAATAATA
>chr3D_1
AATCATGGCAACTTTTGGCCCAAGAAAAAGTCA---AAACATGTTAATATTGTATTTAGTTTTGAAGATCTTGTCGAGAC
GGATTTAATGTTGAAAATGGATTTTTAATCGTATTTTTTATTTAAAAGATAAAATATTTTTAAGTCCGAAAAACCAAAAA
AAATTCGCTG-TGTCATCTGTTTGATGTGGTAAAATAGATAATAATGAGGGCGTTTGAATCATATTGCTTTGTGCCACAC
ATGTGGCACTTATCATTTGGGCTAATTAATATACGAGGCAAATCTTTTGTCTCCATTTAAAAGTAGAAGAAGAAGGGGAT
AGTCGATGACATGCTAGATAGTCATGAGTTAAGCTCCCACAAAATGCTGGCATGTGGTGGCCCAAGGCTTTGGGCAACTT
TGGTGGCCCCACATGTAAGTGGGTGCCTCGTAGGTGCAGCGTTTTAGGCCCACTAGCAGCCAATTCTGGTGGTCGTAACC
CAGTCTTATCTTTCTGCCCCCTTTCTTCCGTTGT-TTCCTTCTTTCGCGTTTGCTTTCCTGGTCCACTACTCAATCTGCT
TTAGAGCATCTATAGCCGAACC----AAATTCGACCCCTTAAACGTCCGCGGACGCGTGAGACGTGACCTTGAAGAGCGA
TGGACGGCCCCTCAAATGTCCTATTGAACAATCACACTCCTTACCCCTCAAGTTCATGTACGTTGATCATATAGTGCAAA
TTCATCACAATTAAGTCCATAC-AAAAAACGAGTCAAAAGCTAGCCAAATTTAGTGGTCTATATCCGCAACACTATTAAG
GACCGTTCATCTGCGCGGCAAAGCGCGCCTTTCCATCTAGA---ATTCTCGAGGAATATGATACCCGTCTCTCGTCGGCT
CATCTGTTGAGTTCGTGCGCGGAGCATCTCATCTGACGGAAAGCGAAGATGTAGCGAAATGCGTCCCCATCTCTTTCCCT
TCACCGGGAAGCTGAGTATATGTCATTTGCCTATATATGAAGCACAG-TTCTTTCTCCACTTCGCTGCATCCGAAGTTTG
TCCTGTCCTTCGTACAGCAGTGATGCAGATGAACAACAAGGAGCCGGCCGCCGACGGCAAGTCGCCGACTACCATCTGTA
GCAGGCTTCAGAGAGCCTTCCACGCCCGGCCGGTCTTCGGGCCTCTTCGCCGCCTCACGGGCCAACCCCACGACGGCGGA
GCTGCCGCTACCGGCGTACCCGGGGGAGCGCCTGCCACGACGCACGGTGGTGCACCGCCACCGGTTGTATTGCCGGCACG
TGCACCGGCGCCGTCTCCAGCAGGCAAAGCTCCCGCACCTACGGCGACACCGGCGATCGTGCCAGCGGCGCCCCAGAAAC
CGGCTGCTGCCAAGGGAGGTGGCAAGCCTGGGCAGGTCCTCGGGAGCACTCCTACCGTCGCTGCAACCAGGAGCAAGGTT
GCCGAGAAGGCGGCAGGGGGGATCCCGGTACCGGTGCCACCGCCGGCAGTCATGGCTGGAAGGCCGGCAGCGGACGCGAA
GGCTGGGG---ACAAGGCGCAGCAGACAAAGGGGAAGATCAGGGTGAGCTCCAGGGTCCGCAAGGCCTTGGCCTCATCCA
AGTAGAGGGATGATCACCTGAATCGCCAGGGTGCGCGCCAAGAACGGAGCTAGCTGAATTACGCCTCTCCAAAGCCATTC
TCTGCTACCAGTGTGCTGTTTTTTATTTACCGATTTTTGAGCTAGGCTCTCCGTTCTGCTGTAACTTCAGATTTTCT-TT
CTTGTTGATGAATTATCACTTGGGGGATCACCAGGAGGGAAAGTCACAGAAACTGGGCCGGATTGTACCGGCAATAATAT
TCTTGGCTCAAGTTTCGTTGATGCTACACATCATATAAAAAAGCTTTGTCTCAAAAAAAAATCACATAAAAAAGCTCACT
CAAGAACGAATAACAGATCTATTTATTGTGACTTTATTATACCATCCTTCGCCGAACTGCAATGTCCTCCAAATTGACGC
AGCTCTTGGAGGCTTACAGG------------GTGTTGGTTCTGAACTTTTGATAGGTTTGTTCTGAACTTCTGATATGC
CAAACAAGTCAGAACTTCTGATAGGTGATCAGCATTACAACTTCTCGATTCGGTGAATGATCAGGTCTCTCTCCTCGTCA
AGTTCATCTTCGCCTGTAAAATGGAACAAAAAAAAATTACATACGCGAGTTTTTGTGGTGGTTGACATCATGGCTTCAAG
TTTAAACTCAGAACAACCAGAAGC-GGGTTTCCTGACTACTCCATCCTTCTTTTGCAATTTTAAGCTGGTGTGTAATGGG
CTCTAAGATGGAAACTTCACAGCACTACCTTTA-----------------------------------------------
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--------------------------CTTGCAGGAAGATTGTGGAGTAGTTTCAACAATTCCTTGCGATTGTCTCGCAAA
GCTTCAATAATACCAGG-------AGGCTTGTTTGGATTGGCAACGAACACCTAATTCCGCACAGGAAAATGGACCAACA
GAAATTGTTAGAAGGAATTTGTTTGACGAGGAAATACAACGTACGTGCACTTATATAACGATGGTACCTTAAAAACGTGG
AAGGCGCATATTTTGATATTTTTGCTTGAATCCTAAAAAA-ATGCCGGTTAGTAGTAACACTCCTACAAATAGATAGGAT
CTGTACACACATAATATTAGTAATA-
>chr6D_1977
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-----------GAACTTCTGATAGGTGATCAGCATTACATATTTTCAATTTCCTGAATGATCAGGTCTTTGTCCTCGTCA
AGTTCTTCTTCGCCTGTGAAATGGAACAAAG-AAAATTACATACACAAGTTTTTGTGGTGGTTGACATCATGGCTTCAAG
TCAAAACTCAAATCAACCACACGATGGGTTTCCTGACTACTCTATCATTCTTTTTCAGTTTCAAGCTGGTCTATGATGGG
TTCTAAGATGGGAACTTCACAGCACTACCTTTACTTGCAGGCAGTGGTGGAGCGTACACCAAACTTAAGGAGGGGCCAAA
ATGAAATCAAGGCATATAAACAACTAAGGTGATCAGACTGGCCGAATAATTAGTAGGAAGTTTACCAAAGGGGAAGCTTA
TCTGGTCACCCGAGGCTCCGCCACTGCTTGCAGGAAGATTGTGGAGTAGTTTCAATAATTCTCTGCGATTGTCTCGCAAA
GCTTCGATAATATCGCTATTCGCTAGGCTTGTTTGGATTTGCCACGAACACCTAAGTCGGCACAGGGAAATGGACCAACA
AAAATTATTAGAAGGAATTTG-TTGACGGGGAAATACAATGTGCGTGCACTTATATAAAGATGGTACCTTAAAAACGTGG
AAGGCACATATTATGATATTTTTGCTTGAATCCTACAAAAGATGCCGGTTAATAGTAACACTCCTACAAATAGATAGGAT
ATGTACACACATAATATTTGTAATA-
>SNPs
---S---S---------------------------------------------------S--------------------
---------------------------------S---------------------------------------------S
---------S--------------------S--------------------S-S------------S----S--------
S----------------S-------------------SS-----------------------------------------
-------------------------S-S--------------------------------S-------------------
-----------------------------S--------------------------------------S-----------
---------------S------------S---------------------------------------S-----------
----------------S-------S-S----------S------------S--------S-S------------------
S--------------------------------------------------S-----------------------S----
----------------------S---------------------------------------------------------
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-------------S------------------------------S-----------------------------------
--------------------SS---------------SS----S---S--S--------------S--------------
--S----------------------------------------------------------S-----SS---------S-
----------S--------------S--------------------------------------------S---------
---------------------SS----------------------------------------SS---------------
---------------------------------S-------------------S----S----S----S---S-------
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--------S---------------------------------------------------------------S-------
---S--------------------------------------------------------------S----------S--
------------------------------------------S-----S----------S-----------S---S----
---------------------------------S---S-SSS-S--S----SS--SSSSS-SS-S-S-S-----------
----------------------------S-SS----------S-------------------S-S----S-------S--
---------------S----SSSSSSSSSSSS------S--------------------S--------------------
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-S--------------------------------S---------------------------------------------
---------------------S---S------------------------------------------------------
---S----------------------------------------------------------------------------
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--------------------------------SS----------------------------------------------
------------------------------------------------------------------------------S-
---S----------------------------------------------------------------------------
---------------------------------------------S------------------S---------------
--------------------------
>forward_611
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-------------------------------CGACCCTTTAAACGTCCGCA-----------------------------
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>reverse_1803
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------------------------------------------CTCACACAAACTGGGCCAGA------------------
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