>input_sequence_76598
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--------------------------------------------ATGTCTTCCTCAAGCTCCCGCGCCACCTCGCAG-AT
GCAGAGCCGGGCGCGTGTGAACATGCCTGTCTTCGTCTGTCCGCGGTGCCGGGCGGGCGTTGATCGGAGGGTTTCTCACA
CACCGAGGAACCAGAATCGTCCATTCTACGTGTGCAGCGAGAATGGGGTAAGAATCGGGGCAATTGCACCATTTTCGTGG
TAGGGATCTTTGAGCAATGGGTTGATCTGTTTGGTGTTCATGCAGGTGACATGCTTCTTTCTTTGGGTCGATGCTCTGGC
CAAGA--CT--GATGAATGAACTGCAAGAAGAGCATGAAGAATGGTTGCGCATCCTGCCACGAACGGCAGTTGCCGCAGC
ACGAGCTCTAGAAGAAGAGATGAAGGGCGAAGCACGCACTGACAGAGAGCTAGCTGTTGAGCTTAGGATGTTGAAGAAGA
AGGTTAGGAAGCTTGAAGATCAAGCAC---TACCAATACCCATTTGCAAATACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTAATGTTGAAAATGTATGGAAAGGCATGA-----------------------------------------
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-----------------------
>chr2D_1_TraesCS2D01G044500
CACGAGAATAAAATGGGCTTAAGCAAATAAAAGGTACGAGGTATGTATATTCCACCAAATCCAACATTTGCAGGCAACAA
CAAATAACACAATACTCCAGAGTATATCATAATGCAGCTGGTGCAGGGGTTATCAGCTACTCCAGTGTTGTCATGTTTCT
TGCTTCTTACTAGGCCTGGGCGTTTTTTCGGTTTCTGCTGTTTGGTTATTTTGTATATTCGGTTAGCAAATCTGGAAACC
GAAATAAGCTTGGAAAATCTACTAGCCGAAACTTCGGTTAACTGAAAATTCGGTTTGGTTTTCGGTTTACTACCGAAATT
TATACACAGAACATAATGTGCAGATTTCAGTTTCAGATTTTGTCACTTTAAACATGATTTTAGACAAGAAATCGATGGGA
ACAGAAACAAAGAATAGGAATAAACGCAGCACATCTGGTGGGGCGCTCATCTGTGAAGTTTTGTTGTGGTGGTGGAGTGG
TACGCGGCTGGATCTTGGAGAGAAGAAAGAGGAGCGCATAT------GGCGAGCCAGCGACGACAAGCGCATGTCAGGGC
GGCCGGCAGGGCAGATTAGCACGAGTGGCGGCGGCGGCGTAGTCGAGCCCATCAATTCAAATTGGGTTAATTATCCTTTT
GCCCTCAGTGGTGTCCATGTACTCAGTTTTGCCCTCAGATGCGAATTGTGCTTAGTTTTGCCCCTAGTCCGTGCGCACCG
ACTCGTTC---CGTGAACTCTGCCGTCTCCGTCAGGTCAACCTTTTGACTCGGCCCTTACAGGTGGGACCATGCAGCAGA
GACGGCCAATTTTATTCAGACCGTTGCACGCGTGGCTTGTGGGACCCAGCA---------------GAGAGCCGTTG---
------------CGGGTGTGCTATATAAGCGGGCGACAG----CGGCGGTGACCACGGCGACAGAGAGCACGGCGGTGAC
CACGGCG--------AGAGAGAGAG----CATGGCGGTGGGAAGCTAGCTGTGGAGGGCGCGGCGG--------------
---------------CGTTGAGATCCCCTTCGGCTCCGAGCTCCATGTCTTCCTCAAGCTCCCGCGCCACCTCGCAG-AT
GCAGAGCCGGGCGCGTGTGAACATGCCTGTCTTCGTCTGTCCGCGGTGCCGGGCGGGCGTTGATCGGAGGGTTTCTCACA
CACCGAGGAACCAGAATCGTCCATTCTACGTGTGCAGCGAGAATGGGGTAAGAATCGGGGCAATTGCACCATTTTCGTGG
TAGGGATCTTTGAGCAATGGGTTGATCTGTTTGGTGTTCATGCAGGTGACATGCTTCTTTCTTTGGGTCGATGCTCTGGC
CAAGA--CT--GATGAATGAACTGCAAGAAGAGCATGAAGAATGGTTGCGCATCCTGCCACGAACGGCAGTTGCCGCAGC
ACGAGCTCTAGAAGAAGAGATGAAGGGCGAAGCACGCACTGACAGAGAGCTAGCTGTTGAGCTTAGGATGTTGAAGAAGA
AGGTTAGGAAGCTTGAAGATCAAGCAC---TACCAATACCCATTTGCAAATACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTAATGTTGAAAATGTATGGAAAGGCATGAATTATGGAGGAATTTGTAATCTTGAAATTGTATGAGAAATT
CACCTAGTTTAAATGTTGGTCACAGTTGTTTAAATGTTG--AAAAAA--------AGA--AGAAGTGACCGACATTTAAA
TATGTTGAAAAAAAGGAGAAGAAATGAGGAATTCAGAAACTTTTGATCACTGAAATGCAGCTCTCTGCTCTGCCTTTCTG
TCCAAAAAAAAAGGTTGCTCTTGGGCCAAATTCAGAGCGTAGAGCCAAGTGCATGCTAGACTAATGGGCCAACTGCATCC
AATTAGGCCCATTCGGGGGTTCTCTTGCGTGTTTTTCTGTTTT-CTGTTCTGATTTAATTTAGGTAGTAAATCATAATGC
TGAAACTTTTTGTGGAAGATAATTGAATTATTCCAGAGCCAAACAATTAAGGTTAGAAATTTTTTGGAGCTGTTAAATAT
TTAATAGCAATTTAATTAATCCAATTCAAATACACCGTGATTTAAATCAAAGACCAAAATGTCATGGAAAATGTGCCTCA
CCTCTAGTAGAGGTTTACACCTGGTGCCAAAATAAATAAACATTTTTTAAGGGCATTACATTGAGAAAAAAA-TAATTTG
TCTAAA-AAAA-TGAAGGGTGGAAAATGCACAAAAAATTGGTGCGGCTGGGGACTCGAACCCAGGACCGCGCAGGTTTGT
GGTGTTTAGGGTTGCGCTGATAACTGCTAGGAAAGATGGCAAGACTTTGACATGGGTAGGGAAGGAAGGTATACATAGTG
AGACTGTGAAATTTGT-CAAAAA-A--AAAATAGTGAGACCGTGAATGTTTGCACACCCGTGAGAGTGGTTTTCCTTTGT
TTTGCACTGAAATTTTGGAGAGTTGGAAGGTTGAAAACGTATGTTTGCACTGCCACATGATTTTGGTTAGAGTGGCACTT
GGTTTAGGGTTAGAGTGGCACTTGGTTTAGGATTTAAAGGGAATAAATTTGCATGTTAGTTCATGACTT----TTTTTGA
ATGAAACAGAGGGCTTCTCACCC
>chr7A_1
CACGAGAATAAAATGGGCTTAAGCAAATAAAAGGTACGAGGAATGTATGTTCCACCAAATCCAACATTTGCAAGCAACAA
CAAATAACACAATACTCCAGAGTAAATCATAATGCAGCTGGTGTAGGGGTTATCAACTACTCCAGTGTTTTCATGTTTCT
TGCTACTTACTAGGCCTGGGCGTTTTTTCAGTTTCTACTGTTCGGTTATTTTGTATATTCGGTTAGCAAATCTGGAAACC
GAAATAAGCTTGC-AAATCTACTAACTGAAACTTCGGTTAACCGAAAAATCGGT-------TCGGTTTACTACCGAAATT
TATACACAGAACATAATGTGCAGATTTCAGTTTCAGATTTTGTCACTTTAAACAGGATTTTAGA-AAGAAATCAATGGGA
ATAGAAACAAAAAATAGAAATAAATGCAGCACATCTGGTGGAGCGCTCACCCGTTAAGTTCTGTT---GTGGTGGAGTGG
TACGCGGCTGGATCTTGGAGAGAAGAAAGAGGAGCGCATATTGCGGTGGCGAGCTAGCGACGACAAGCGCATGTCGCGGC
GGCCGGCATGGAAGAT----------------------------------------------------------------
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>chr3B_616
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-------------------------------------------------------------TTGGGTTAATTATTCGTTT
GCCCTCAGTGGTGTCCATGTGCTCAGTTTTGCCCTCAGATGCGAATTGTGCTCAGTTTTGCCCCTAGTCCGTGCGCACCG
ACTCGTTC---CATGAACTCCGCCGTCTCCGTCAAGTCAACCTTTTGACTCGGCCCTTACTGGTCGGACCAGGCGGCAGA
GACAGCCAATTTTATTCAGATCGTTGCACGCGTGGCTTGTGGGACCCAGCAGAGAGCCGTTGAGTAGAGAGCCGTTG---
------------CGGGTGTGCTATATAAGCGGGCGACAG----CGATGGTGACCACGGCGACAGAGAGCACGGTGGTGAC
CACGGCGAGAGAGAGAGAGAGAGAG----CACGGCGGTGGGAAGCTAGCTGCGGAGGGCGTGGCGG--------------
---------------CGTTGAGATCCCCTTCAGCTCCGAGCTCCATGTCTTCCTCAAGCTCCCGCGCCACCTCGCGG-AT
GCAGAGCCGAGCGCGTGTGGACATGCCTGTCTTCGTCTATCTGTGGTGTCGGGCGGGCGTTGATCGGAGGGTTTCTCACA
CACCGAGGAACAAGAATCGTCCGTTCTACATGTGCAGCGAGAATGGGGTAAGAATCGAGTCAATTGCACCATTTTTATGG
TCGGGATCTTTGAGCAATGGGTTGATCTGTTTGGTGTTCATGCAGGTGACATGCTTCTTTCTTTGGATCGATGCTCTGGC
CAAGA--CTCTGATGAATGAACTGCACGAATAGCATGAAGAATGGTTGCGCTTGCTGCCATGAACGGCAGTGGCCGCAGC
ACGAGCTCCAGAAGAAGAGATGGAGGGCGAAGCACGCGGTGACAGAGAGCTAGCTGTTGATCTTAGGATGTTGAAGAAGA
AGGTTAGGAAGCTTGGAGATCAAGCAC---TACCAATACCCATTTGCAAATACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTAATGTTGAAAATGTATGGAAAGGCATGAACTATGGAGGAATTTGTAATCCTGAAATTGTATGAGAAATT
CACCTAGTTTAAATGTTGGTCAAAGTTGTTTAAATGTTG--AAAAAA--------AGAGAAGAAGTAACCAACATTTAAA
TATGTTGAAAAAAACGAGAAGAAATGAGGAATTTAGAAACTATTGATCAATGAAATGCAGCTCTCTGCTCTGCCTTTCTG
TC--AAAAAAAAGGTTGCTCTTGGGCCAAATTCAGAGCGTAGAGCCAAGTGCAGGCTAGACTAATGGGCCAACTGCATCC
AATTAGGCCCATTCGGGGGTTCTCTTGCGTGTTTT-CTGTTTT-CTGTTCTGATTTAATTTAGGCAGTAAATCATAATGC
TGAAACTTTTTGTGGAAGCTAATTGAATTATTCTAGAGCCAAACAATTAAGGTTAGATA-TTTTTGGAGCTGTTAAATAT
TTAATAGCAATTTAATTAATCCAATTCAAATACACCGTGATTTAAATCAAAGACCAAAATGTCATGGAAAATGTGCCTCA
GCTCTGGTAGAGGTTTACACCTGGTGCCAAAATAAATGAACATTTTTTAAGGGCATTACATTGAGAAAAAAA-TAATTTG
TCT-AA-AAAA-TGAAGGGTGGAAAATGCACAAAAAATTGGTGCGGCTGGGGACTCGAACCCAGGACCGCATGGGTTTGT
GGTGTTTAGGGCTGCGCTGGTAACCGCTAGGACAGATGGCAAGACTTTGACATGGGTAGGGAAGGAAGGTATACATAGTG
AGACTGTGAAATTTGT-CAAAAA-A--A---TAGTTAGACCGTGAATGTTTGCACACGCGTGAGAGTGGTTTTCCTTTGT
TTTGCACTGAAATTTTGGAGGGTTGGAAGGTTGAAAACGTATGTTTGCACTGCCACATGATTTTGGTTAGAGTGGCACTT
GGTTTAGGGTTAGAGTGGCACTTGGTTTAGGATTTAAAGGGAATAAATTTGCATGTTAGTTCATGACTC-TTTTTTTTGA
ATGAAACAGAGGGCTTCTCACCC
>chr3A_617
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--------------------------------------------------------------TGGGTTAATCATCATTTT
GCCCTCAGCGGTGTCCATGTGCTCAGGTTTGCCCTCAGATGCGAATTGTGCTCAGTTTTGCCCCTAGTCCGAGTGCACCG
ACTCGTTC---CGTGAACTCTGTCGTCTCCGTCAAGTCAACCTTTTGACTTGGCCCTTACAGGTGGGACCAGGTGGCAGG
GACGACCAATTTTATTCAGACTGTTGCACGTGTGGCTTGTGGGACCCAACAGAGAGCCA---------------TTG---
------------CAGGTGTGCTATATAAGAGGGCGACAA----CGGAGGTGACCATGGCGACAGAGAGCACGCCGGTGAC
CATGGCG--------AGAGAGAGA--GAGCACAGTGGTGGGAAGCTAGCTGTGGAGGGCGCGGCGA--------------
---------------CGTTGAGATCCCCTTCGGCTCCGAGCTCCATGTCTTCCTCAAGCTCCCGTGACACCTCGTGGAAT
GCAGAGCCGGGCGCGTGTGGACATGCCTGTCTTCGTCTGTCCGCGGTGCTGGGCGGGCGTTGATTGGAGGCTTTCTCACA
CACCGAGGAACCAGAATCGTCCGTTCTACGTGTGCAGCGAGAATGGGGTAAGAATCGGGGCAATTGCACCATTTTCATGG
TCGGGATCTTTGAGAAATGGGTTGATCTATTTGGTGTTCATGCAGGTGACATGCTTCTTTCTTTGGGTTGATGCTCTGGC
CAAGACTCT--GATGAATGAACTGCAAGAAGAGCATGAAGAATGGTTGTGCATGCTGCCACGAACGACAGTGGCCGCAGC
ACGTGCTCCGGAAGAAGAGATGGAGGGCGAAGCACGCACGGACATAGAGCTAGCTGTTGAGCTTAGGATGTTGAAGAAGA
AGGTTAGGAAGCTTGAAGATCAAGCAC---TACCAGTACCCATTTGCAAACACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTAATGTTGAAAATGTATGGAAAGGCATGAATTATGGAGGAATTTGTAATCTTGAAATTGTATGAGAAATT
CACCTAGTTTAAATGTTGGTCAAAGTTGTTTAAATGTTG--AAAAAA--------A----AGAAGTGACCAACATTTAAA
TATGTTGAAAAAA-GAAGAAGAAATGAGGAATTCATAAACTTTTGATCAATGAAATGCAGCTCTCTGCTCTGCCTTTATG
TC---AAAAAAAGGTTGCTCTTGGGCCAAATTCATAGCGTAGAGCCAAGTGCAGGCTAGACTAATGGGCCAACTGCATCC
AATTAGGCCCATTCGGGGGTTCTCTTGCGTGTTTTTCTGTTTT-CTGTTCTGATTTAATTTAGGCAGTAAATCATAATGC
TGAAACTTTTTATGGAAGCTAAATGAATTATTCCAGAGCCAAACAATTAAGGTTAGAATTTTTTTGGAGCTGTTAAATAT
TTAATAGCAATTTAATTAATCCAATTCAAATACACCATGATTTAAATCAAAGACCAAAATGTCATGGAAAATGTGCCTCA
GCTTAGGTAGAGGTTTATACCTGGTGCCAAAATAAATGAACATTTTTTAAGGGCATTACATTGAG-AAAAAA-TAATTTG
TCT-AA-AAAA-TCAAGGGTGGAAAATGCACAAAAAATTGGTGTGGCTGGGGACTTGAACTCAGGACCGCGTGGGTTTGT
GGTGTTTAGGGCTGCGCTGGTAACCGCTAGGACAGATGGCAAGACTTTGACATGGGTAGGGAAGGAAGGTATACATAGTG
AGACCGTGAAATTTGT-CAAAAA-ACAA---TTGTGAGACCGTGAATGTTTGCACACGCGTGAGAGTGGTTTTCCTTTGT
TTTGCACTGAAATTTTGGAGGGTTGGAAGGTTGAAAACGTATGTTTGCACTGCCACATGATTTTGGTTAGAGTGACAGTT
GGTCTAGGGTTAGAGTGGCACTTGGTTTAGGATTTAAAGGGAATAAATTTGCATGTTAGTTCATGACTT----TTTTTGA
ATGAAATAGAGGG-TTCTCACCC
>chr7D_618
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---------------------------------------------------------------GGGTTAATTATCCTTTT
GCCCTCAGTGGTGTCCATGTACTCAGTTTTGCCCTCAGATGCGAATTGTGCTCAGTTTTGCCCCTAGTTCGTGCGCACCA
ACTCGTTC---CGTGAACTCTGCCGTCTCCGTCAGGTCAACCTTTTGACTCGGCCCTTACAGGTGGGACCAGGCGGCAGA
GACGGCCAATTTTATTCAGACCGTTGCACGCGTGGCTTGTGGGACCCAGCAGGGAGCCGTTGAGCAGAGAGCCGTTG---
------------TGGGTGTGCTATATAAGTGGGCGACAG----CGGCGGTGACCACGGCGACAGAGAGCACGGCG-----
-AGAGAG--------AGAGAGAGA--GAGCACGGCAGTGGGAAGCTAGCTGTGGAGGGCGCGGCGG--------------
---------------CGTTGAGATCCCCTTCGGCTCCGAGCTCCATGTCTTCCTCAAGCTCCCGCGCCACCTCGCGG-AT
GTAGAGCCCGGCGCGTGTGGACATGCCTGTCTTCGTCTGTCCGCGGTGCCGGGCGGGCGTTGATCGAAGGGTTTCTCACA
CACCGAGGAACCAGAATCGTTCGTTCTACGTGTGCAGCGAGAATGGGGTAAGAATCGGGGCAATTGCACCATTTTTGTGG
TCGGGATCTTTGAACAATGGGTTGATCTATTTGGTGTTCATGCAGGTGACATACTTCTTTCTTTGGGTCGATGCTCTGGC
CAAGACTCT--GATGAATGAACTGCAAGAAGAGCATGAAGAATGGTTGTGCATGCTGCCACGAACGGCAGTGGCCGCAGC
ACGAGCTCCGGAAGAAGAGATGGAGGGCGAAGCACGCACTGACAGAGAGCTAGCTATTGAGCTTAGGATGTTGAAGAAGA
AGGTTAGGAACCTTGAAGATCAAGCAC---TACCAATACCCATTTGCAAATACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTAATGTTGAAAATGTATGGAGAGGCATGAATTATGGAGGAATTTGTAATCTTGAAATTGTATGAGAAATT
CACCTAGTTTAAATGTTGTTCAAAGTTGTTTAAATGTTGAAAAAAAAAGA----GA----AGAAGTGACCAACATTTAAA
TATGTTGAAAAAAAGGAGAAGAAATGAGGAATTCAGAAACTTTTGATCAATGAAATGCAGCTCTCTGCTCTGCCTTTCTG
TCC-AAAAAAAAGGTTGCTCTTGGGCCAAATTCAGAGCGTAGAGCCAAGTGCAGGCTAGACTAATGGGCCAACTGCATCC
AATTAGGCCCATTCGGGGGTTCTCTTGCGTGTTTTTCTCTTTT-CTGTTCTGATTTAATTTAGGCACTAAATCGTAATGC
TGAAAATTTTTGTGGAAGCTAATTGAATTATTCCAGAGCCAAACAATTAAGGTTAGAAATTTTTTGGGGCTGTTAAATAT
TTAATAGCAATTTAATTAATCCAATTCAAATACACCGTGATTTAAATCAAAGACCAAAATGTCATGGAAAATGTGCCTCA
GCTCTGGTAGAGGTTTACACCTGGTGCCAAAATAAATGAACATTTTTTAAGGGCATTACATTGAGAAAAAAA-TAATTTG
TCT-AA-AAAA-ATGAAGGTGGAAAATGCACAAAAAATTGGTGCGGCTGGGGACTCGAACCCAGGACCACGTGGGTTTGT
GGTGTTTAGGGCTGCGCTGGTAACCGCTAGGACAGATGGCAAGACTTTGACATGGGTAGGGAAGGAAGGTATACATAGTG
AGACTGTGAAATTTGT-CAAAAA-A--A---TAGTGAGACCGTGAATGTTTGCACACGCGTGAGAGTGGTTTTTCTTTGT
TTTGCACTGAAATTTTGGAGGGTTGGAAGGTTGAAAACGTATGTTTGCACTGCCACATGATTTTAGTTAGAGTGGCACTT
GGTTTAGGGTTAGAGTAGCACTTGGTTTATGATTTAAAGGGAATAAATTTGCATGTTAGTTCATGACTTATTTTTTTTGA
ATGAAACAGAGGGCTTCTCACCC
>chr4D_618
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---------------------------------------------------------------GGGTTAATTATCCTTTT
GCCCTCGGTGGTGTCCATGTACTCAGTTTTGCCCTCAGATGCGAATTGTGCTCAGTTTTGCCCCTAGTCCGTGCGCACCG
AGTCGATC---CGTGAACTCTGCCATCTCCGTCAGGTCAACCTTTTGACTCAACCCTTATAGGTGGGACCAGGTGGCAGA
GACGGCCAATTTTATTCAGACCGTTGCACGCGTGGCTTGTGGGACCCAGCAGAGAGCCA---------------TTGAGC
AGAGAGCCGTTGCGGGTGTGCT-TATAAGCGGGCGACAG----CGGCGGTGACCACGGCGACAGAGAGCACGGCGGTGAC
CACGGCG--------AGAGAGAGAGAGAGCACGGCGGTGGGAAGCTAGCTGTGGAGGGCGCGGCAG--------------
---------------CGTTGAGATCCCCTTCGGCTCCGAGCTCCATGTCTTCCTCAAGCTCCCGCGCCACCTCGCGG-AT
GCAGAGCCGGGCGCGTGTGGACATGCATGTCTTCGTCTGTCCGCGGTGCCGGGCGGGCATTGATCGGAGGGTTTCTCACA
CACCGAGGAACCAGAATCGTCCGTTCTACGTGTGCAGCGAGAATGGGGTAAAAATCGGGGCAATTGCACCATTTTCGTGG
TCGGGATCTTTGAGCAATGGGTTGATCTGTTTGGTGTTCATGCAGGTGACATGCTTCTTTCTTTGGGTCGATGCTCTGGC
CAAGACTCT--GATGAATGGACTGCAAGAAGAGCATGAAGAATGGTTGCGCATGCTGCCACGAATGGCAGTGGCCGCAGC
ACAAGCTCCGGAATAAGAGATGGAGGGAGAAGCACGCACTGAGAGAGAGCTAGCTGTTAAGCTTAGGATGTTGAAGAAGA
AGGTTAGGAAGCTTGAAGATCAAGCAC---TACCAATACCCATTTGCAAATACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTGATGTTGAAAATGTATGGAAAGGCATGAATTATGGAGGAATTTGTAATCTTGAAATTGTATGAGAAATT
CACCTAGTTTAAATGTTGGTCAAAGTTGTTTGAATGTTG--AAAAAAAGA----GA----AGAAGTGACCAACATTTAAA
TATGTTGAAAAAA-GGAGAAAAAATGAGGAATTCAGAAACTTTTGATCAATGAAATGCAGCTCTCTGCTCTGCCTTTCTG
TC-AAAAAAAAAGGTTGCTCTTGGGCCAAATTCAGAGCGTAGAGCCAAGTGCAGGATAGACTAATGGGCCAACTGCATCC
AATTAGGCCCATTCGGGGGTTCTCTTGCGTGTTTTTCTGTTTTTCTGTTCTGGTTTAATTTAGGCAGTAAATCATAATGC
TGAAACTTTTTGTGGAAGCTAATTGAATTATTCCAGAGCCAAACAATTAAGGTTAGAAACTTTTTGGAGCTGTTAAATAT
TTAATAGCAATTTAATTAACCCAATTCAAATACACCGTGATTTAAACCAAAGACCAAAATGTCATGGAAAATGTGCCTCA
GCTCTGGTAGAGGTTTACACCCGGTGCCAAAATAAATGAACA-TTTTTAAGGGCATTACATTGAGAAAAAAA-TAATTTG
TCT-AA-AAAA-TGAAGGGTGGAAAATGCACAAAAA-TTGGTGTGGCTAGGGACTCGAACCCAGGACCGCGTGGGTTTGT
GGTGTTTAGGGCTACGCTGGTAACCGCTAGGACAGATGGCAAGACTTTGACATGGGTAGGGAAGGAAGGTATACATAGTG
AGACTGTGAAATTTGTCCAAAAA-A--A---TAGTGAGACCGTGAATGTTTGCACACGCGTAAGAGTGGTTTTCCTTTGT
TTTGCACTGAAATTTTGGAGGGTTGGAAGGTTGAAAATGTATGTTTGCACTGCCACATGATTTTGGTTAGAGTGGCACTT
GGTTTAGGGTTAGAGTGGCACTTGGTTTAGGATTTAAAGGGAATAAATTTATATGTTAGTTCATGACTT----TTTTTGA
ATGAA-CAGAGGGCGTCTCACCC
>chr4A_618
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---------------------------------------------------------------GGGTTAATCAGCCTTTT
GCCCTTAGTGGTGTCCATCTGCTCAGTTTTGCTCTCAGATGCGAATTGTGCTCAGTTTTGCCCCTAGTCCGTGCGCACCG
ACTCGTTC---CATGAACTCTGCCGTCTCCTTCAGGTCAACCTTTTGACTCGGCCCTTACAGGTGAGACCAGGCGACAGA
GACGACCAATTTTATTCAGACCGTTGCACGCGTGGCTTGTGGGACCCAGCAGAGAGCTGTTGAGCAGAGAGTCGTTG---
------------CGGGTGTGCTATATAAGCGGGCGACAG----CGGCGGTGACCACGGCGAGAGAGATCACGGCGGTGAC
CACGGCG--------AGAGAGAGA--GAGCATGGCGGTGGGAAGCTAGCTGTGGAGGGCGCGGCGT--------------
---------------CCTTGAGATTCCCTTCGGCTCCGAGCTCCATGTCTTCCTCAAGCTCCCGCGCCACCTCGCAG-AT
GCAGAGACGGGCGCGTGTGGACATGCCTGTCTTCGTCTGTCCGCGGTGCCGGGCGAGCGTTGATCGGAGGGTTTCTCACA
CACTGAGGAACCAGAATCGTCCATTCTATGTGTGCAGCGAAAATGGGGTAAGAATCGGGGCAATTGCACCATTTTCGTGG
TCGGGATCTTTGAGCAATGGGTTGATCTGTTTCGTGTTCATGCAGGTGACATACTTCTTTCTTTGGGTCGATGCTTCGGA
CAAGACTCT--GATAAATGAACTGCTAGAAGAGCGTGAAGAATGGTTGTGCATGCTGCCACGAACCGCATTGGCCGCAGC
ACGAGCTCCAGAAGAAGAGATGGAGGGCGAAGCACGCACTGACAGAGAGCTAGCTGTTGAGCTTAGGATGTTGAAGAAGA
AGGTTAGGAAGCTTGAAGATCAAGCAC---TACCAATACCCATTTGCAAATACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTAATGTTGAAAATGTATGGAAAGGCATGAATTGTGGAGGAATTTGTAATCTTGAAATTGTATGAGAAATT
CACCTAGTTTAAATGTTGGTCAAAGTTGTTTAAATGTTG--AAAAAAAGA----GA----AGAAGTGACCAACATTTAAA
TATGTTGAAAAAAAGGAGAAGAAATGAGGAATTCAGAAACTTTTGATCAATGAAATGCAGCTCTCTGCTCTGCCTTTCTG
TC-AAAAAAAA-GGTTGCTCTTGGGCCAAATTCAGAGCGTAGAGCCAAGTGCAGGCTAGACTAATGGGCCAACTGCATCC
AATTAGGCCCATTCGGAGGTTCTCTTGCGTGGTTTTCTATTTT-TTGTTCTGATTTAATTTAGGCAGTAAATCGTAATGC
TGAAACTTTTTGTGGAAGCTAATTGAATTATTCCAGAGCCAAACCATTAAGGTTAGAAATTTTTTGGAGCTGTTAAATAT
TTGATAGCAGTTTAATTAATCCAATTCAAATACACCCTGATTTAAATCAAAAACCAAAATGTCAT-GAAAATGTGCCTCA
GCTCTGGCAGAGGTTTACACTTGGTGCCAAAATAAATGAACATTTTTTAAGGGCATTACATTGAGAAAAAAAATAATTTG
TCTAAA-AAAA-TGAAGGGTGGAAAATGCACAAAAAATTGGTGCCGCTGGGGACTCGAACCCAGGATCGCGTGGGTTTGT
GGTGTTTAGGGCTGCGCTGGTAACCGCTAGGACAGATGGCAAGACAATGACATGGGTAGGGAAGGAAGGTATACATAGTG
GGACTGTGAAATTTGT-CAAAAACA--A---TAGTGAGACCGTGAAAGTTTGCACACGGGTGAGAGTGGTTTTCCTTTGT
TTTGCACTAAAATTTTGGAGGGTTGGAAGGTTGAAAATGTATGTTTGCACTTCCATATGATTTTGGTTATAGTGGCACTT
GGTTTAGGGTTAGAGTGGCACTTGGTTTAGGATTTAAAGGGAATAAATTTGCATGTTAGTTCATGACTTATTTTTTTTGA
GTGAAACAGAGGGCTTCTCACCC
>chr1B_618
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---------------------------------------------------------------GGGTTAATTATCCTTTT
GTTCTCAGTGATGTCCATCTGCTCAGTTTTGTCCTCAAATGCGAATTGCGTTCAGTTTTGCCCCTAGTCCGTGCGCACCG
ACTCGTTC---CGTGAACTCTGGTGTCTCCGTCAGGTCAACGTTTTGACTCGGCCCTTACAGGTGGGACCAGGCGGCAGA
GACGACCAATTTTATTCAGACAGTTGCACGCGTGGCTTGCGGGACCCAGCAGAGAGCCGTTGAGCATAGAGTCGTTG---
------------CGGGTGTGCTATATAAGCGGGCGACCG----CAGCGGTGACCACGGCGACAGAGAGCACGGCGCTGAC
CACAGCG--------AGAGAGCCG--GAGCACGGCGGTGGGAAGCTAGCTGTGGAGGGCGCGGCGG--------------
---------------CGTTGAGATCTCGTTTGGCTCCGAGCTCCATGTCTTCCGCAAGCTCCCGCGCCACCTCGCAG-AT
GCAAAGCCGGGCACGTGTGGAGATGCCTGTCTTCGTCTGTCTGCGGTGCCGAGCGAGCGTTGATCGGAGGGTTTCTCACC
CACCGAGGAACCAGAATCGTCTGTTCTACGTGTGCAGCGAGAATGGGGTAAGAATCAGGGCAATTGCACCATTTTCGTGG
TCGGGATCTTTGAGCAATGGGTTGATCTGTTTCGTGTTCATGCAGGTGACATGCTTCTTTCTTTGGGTCGATGCTCTGGC
CAAGACTCT--GATAAATGAACTGCAAGAAGAGCATGAAGAATGGTTGCGCATGCTGCCCCGAACCGCAGTGGCCGCAGC
ACGAGCTCCGGAAGAAGAGATGAAGGGCGAAGCACACACTGACAGAGAGCTAGCTGTTGAGCTTAGGGTGTTGAAGAAGA
AGGTTAGGAAGCTTGAAGATCCAGCAC---TACCAATACCCATTTGCAAATACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTAATATTGAAAATGTATGGAAAGGCATGAATTATGGAGGAATTTGTAATCTTGAAATTGTATGAGAAATT
CACCTAGTTTAAATGTTGGTCAAAGTTGTTTAAATGTTG--AAAAAAA-A----GA----AGAAGTGACCAGCATTTAAA
TATGTTGAAAAAA--GAGAAGAAATGAGGAATTCAGAAACTTTTGATCAATGAAATGCAGCTCTCTGCTCTGCCTTTCTG
TC-AAAAAAGT---TTGCTCTTGGGCCAAATTCAGAGCGTAGAGCCAAGTGCAGGCTAGACTAATGGGCCAACTGCATCC
AATTCGACCCATTCGGGGGTTCGCTTGCATGTTTTTCTATTTT-CTGTTCTGATTTAATTTAGACAGTAAATCATAACGC
TGAAACTTTTTGTGGAAGCTAATT-AATTATTCCAGAGCCAAACAATTAAGGTTAGAAATTTTTTGGAGCTGTTAAATAT
TTAATAACAATTTAAGTAATCCAATTTAAATACACCTTGATTTAAATCAAAGACCAAAATGACATGAAAAATGTGCCTCA
GCTCTGGTAGAGGTTTACACCTGGTGCCAAAATAAATGAACATTTTTTAAGGGCATTACATTGAGAAAAAAC-TAATTTG
TCT-AA-AAAA-TGAAGGGTGG--AATGCACAAAAAATTGGTGCGTCTGGGGACTCAAACCCAGGACCGCGCGGGTTTGT
GGTGTTTAGGGCTGCGCTGGTAACCGCTAGGACAGATGGCAAGACTCTGACATGGGTAGGGAAGGAAGGTATACATAGTG
AGACTGTGAAATTTGT-CAAAAA-A--A---TAGTGAGACCTTGAATGTTTGCACACGCGTGAGAGTGGTTTTTCTTTGT
TTTGCACTGAAATTTTGGAGGGTTGGAAGGTTGGAAACGTATGTTTGCACTGCCACGTAATTTTGGTTAGAGTGACACTT
GGTTTAGGGTTAGAGTGGCACTTGGTTTAGGATTTAAAGGGAATAAATTTGCATGTTAGTTCATGACTTAA-TTTTTTGA
ATGAAACGGAGGGCTTTTCACCC
>chr6D_618
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---------------------------------------------------------------GGGTTAATTATTCTTTT
GCCCTCAGTGGTGTCCATGTGCTCAGTTTTGCCCTCAGATACGAATCGTGCTCAGTTTTGCCCCTAGTCTGTGCGCACCA
ACTCGTTTTGTCGTGAACTCTGCCATCTCCGTCAGGTCAACCTTTTGACTCGGCCCTTACAGGTGGGACCAGGCGGCAGA
GACGCCCTAGATGA-TCAGACCGTTGCACGCGTGGCTTGTGGGACCCAGCAGAGA---------------GCCGTTG---
------------CGGGTGTGCTATATAAGCGGGCGACAGACAGCGGCGGTGACCACGGCGACAGAGAGCACGGCGGTGAC
CACGAC--------------GAGAGAGAGAGCGGCGGTGGGAAGCTAGCTGTGGAGGGCGTGGCGG--------------
---------------CGTTGAGATCCCCTTCGGCTCCGAGTTCCATGTCTTCCTCAAGCTTCCGCGCCACCTCACGG-AT
GCAGAGCCGGGCGCGGGTGGACATGCCTGTCTTCGTCTGTCCGCGGTGCCGGACGGGCGTTGATCGGAGGGTTTCTCACA
CACCGAGGAACCAGAATCGTCCGTTCTACGTGTGCAGCAAGAATGGGGTAAGAATCGGGGCAATTGCACCATTTTTGTGG
TCGGGATCTTTGAGCAATGGGTTGATCTGTTTGGCGTTCATGCAGGTGAAATGCTTCTTTCTTTGGGTCGATGCTCTGGC
CAAGACTCT--GATGAATGAACTGCAAGAAGAGCATGAAGAATGGTTGTGCATGCTGCCACGAACGGCAGTAGCCACAGC
ACGAGCTCCGGAAGAAGAGATGGAGCGCGAAGCACGCACTGACAGAGAGCTAGCTGTTGAGCTTAGGATGTTGAAGAAGA
AGGTTAGGAAGCTTGAAGATCAAGCACAAATACCAATACCCATTTGCAATTACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTAATGTTGAAATTGTATGGAAAGGCATGAATTATGGAGGAATTTGTAAGCTTGAAATTGTATGAGAAATT
CACCTAGTTTAAATTTTGGTCAAAGTTGTTTAAATGTTG--AAAAAAA-AAAGAAA----AGAAGTGACCAACATTTAAA
TATGTTGAAAAAAGGGAGAAGAAATGAGGAATTCAGAAACTTTTGATCAATGAAATGCAGCTCTCTGCTCTGCCTTTCTG
TA-AAAAAAAGGTTCCTCTG-TGGGCCAAATTCAGAGCATAGAGCCAAGTGCCGACTAGACTAATGGGCCAACTGCATCC
AATTAGGCCCATTCGGGGGTTCTCTTGCGTGTTTTTCTGTTTT-CTGTTCTGATTTAATTTAGGCAGTAAATCATAATGC
TGAAACTTTTTGTGAAAGCTAATTGAATTATTCCAGAGCCAAACAATTAAGTTTAGAATCTTTTTGGAGCTGTTAAATGT
TTAATAGCAATTTAATTACTTCAATTCAAATACACCGTGATTTAAATCAAAGACCAAAGTGTCATGGAAAATGTGCCTCA
GTTCTGGTAGAGGTTTACACCTGGTGCCAAAATTAATGAACA-TTTTTAAGGGCATTACATTGAGAAAAAAA-TAATTTG
TCT-AA-AAAAATGAAGGGTGAAAAATGAACTAAAAATTGGTGCGGCTGGGGACTCGACCCCCGGACTGCGTGGGTTTCT
GGCGTTTAGGGCTGCGCTGGTAACCGCTAGGACAGGTGGAAAGACTTTGACATGGGTAAGGAAGGAAGGTATATATAGTG
AGACCGTGAA----------------------------------------------------------------------
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-----------------------
>chr4D_882
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--------------------------------------------GGCGGTGACCACGGCGAGA-----------------
--------------------GAGAGAGAGCACGGCGGTGGGAAGCTAGCTGTGGAGGGCGCGGCGGTGGGAAGCTAGCTG
TGGAGGGCGCGACGGCGTTGAGATCCCCTTCGGCTCCGAGCTCCATGTCTTCCTCAAGCTCCTGCGCCACCTCGCGG-AT
GCAGAGCCGGGCGCGTGTGGACATGCCTGTCTTCGTCTGTCCATGGTGCCGGGCGGGCGTTGATCGGAGGGTTTCTCACA
CACCGAGGAACCAGAATCGTCCGTTCTACGTGTGCAACGAGAATGGGGTAAGAATCGGGGCAATTGCACCATTTTCGTGG
TCGGGATCTTTGAGCAATGGGTTGATCTGTTTGGTGTTCATGCAGGTGACATGCTTCTTTCTTTGGGTCGATGCTCTGGC
CAGGACTCT--GATGAATGAACTGCAAGAAGAGCATGAAGAATGGTTGCGCATGCTGCCACGAACGGCAATGGCCGCAGC
ACGAGCTCCGGAAGAAGAGATGGAGGGCAAAGCACGCACTGGCAGAGAGCTAGCTGTTGAGCTTAGGATGTTGAAGAAGA
AGGTTAGGAAGCTTGAAGATCAAGCAC---TACCAATACCCATTTGCAAATACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTAATGTTGAAAATGTATGGAAAGGCATGAATTATGGAGAAATTTGTAATCTTGAAATTGCATGAGAAATT
CACCTAGTTTAAATGTTGGTCAAAGTTGTTTAAATGTTG--AAAAAAA-A----GAGA--AGAAGTGACCAACATTTTAA
TATGTTG-AAAAAAGGAGAAGAAATGAGGAATTCAGAAACTTTTGATCAATGAAATGCAGCTCTCTGCTCTGCCTTTCTG
TC-AAAAAAAA-GGTTGCTCTTGGGCCAAATTCAGAGCGTAGAGCCAAGTGCAGGCTAGACTAATGGGCCAACTGCATCC
AATTAGGCCCATTCGGGGGTTCTCTTGCGTGTTTTTCTGTTTT-CTGTTCTGATTTAATTTAGGCAGTAAATGATAATGC
TGAAACTTTTTGTGGAAGCTAATTGAATTATTCCAGAGCCAAACAATTAAGGTTAGAATTTTTTTGGAGTTGTTAAATAT
TTAATAGCAATTTAATTAATCCAATTCAAATACACCGTGATTTAAATCAAAGACCAAAATGTCATGGAAAATGTGCCTCA
GCTCTGGTAGAGGTTTACACCTGGTGCCAAAATAAATGAACATTTTTTAAGGGCATTACATTGAGAAAAAAA-TAATTTG
TCT-AA-AAAA-TGAAGGGTGGAAAATGCACAAAAAATTGGTGCGGCTGGGGACTCGAACCCAGGACCACGTGGTTTTGT
GGTGTTTAGGGCTGCGCTGGTGACCGCTAGGACAGATGGCAAGACTTTGACATGGGTATGGAAGGAAGGTATACATAGTG
AGACCGTGAAATTTGT-CAAAAA-A--A---TGGTGAGACCGTGAATGTTTGCACACGTGTGAGAGTGGTTTTCCTTTGT
TTTGCACTGAAATTTTGGAGGGTTGGAAGGTTGAAAACGTATGTTTGCACTGACACATGATTTTGGTTAGAGTGGCACTT
GGTTTAGGGTTAGAGTGGCACTTGGTTTAGGATTTAAAGGGAATAAATTTGCATGTTAGTTCATGACTTG--TTTTTTTA
ATGAAACAGAGGGCTTCTCACCC
>chr5B_938
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--------------------------------GGCGGTGGGAAGCTAGCTGTGGAGGGCGCGACGG--------------
---------------CGTTGAGATCCCCTTCGGCTCCGAGCTCCATGTCTTCCTCAAGCTCCCGCACCACCTCGCGG-AT
GCAGGGCCGGGCGCGTGTGGACATGCTTGTCTTCATCTGTCCGCGGTGCCGGGCGGGCGTTGATCGGAGGGTTTCTCACA
CATCGAGGAACCAGAATCCTCCGTTCTACGTGTGCAGCGAGAATGGGGTAAGAATCGGGTCAATCGCACCATTTTCGTGG
TCGGGATCTTTGAGCAATGGGTTGATCTGTTTCGTGTTCATGCAGGTGACATGCTTCTTTCTTTGGGTCGATGCTCTGGC
CAAGACTAT--GATAAATGAACTGCAAGAAGAGCATGAAGAATGGTTGCGCATGCTGCCACGAACCGCAGTGGCCACAAC
ACAAGCTCCGGAAGAAGAGATGGAGGGCAAAGCACACACAGACAGAGAGCTAGCTGTTGAGCTTAGGATGTTGAAGAAGA
AGGTTAGGAAGCTTGAAGATCAAGCAC---TACCAATACCCATTTGCAAATACTTTTGGGCATTTGTAGGTATGGTAATC
GCACTGGTTGTAATGTTGAAAATGTATGGAAAGGCATGAATTATGGAGGAATTTGTAATCTTGAAATGGTATGAGAAATT
CACCTAGTTTAAATGTTGGTCAAAGTTGTTTAAATGTTG--AAAAG-A-AAAGAGA----AGAAGTGACCAACATTTAAA
TATGTTGAAAAAAAGGAGAAGAAATGAGGAATTCAGAAACTTTTGATCAATGAAATGCAGCTCTCTGCTCTGCCTTTCTG
TC-AGAAAAAA-GGTTGCTCTTGGGCCAAATTCAGAGCGTAGATCCAAGTGCAGGCTAGACTAATGGGCCAACTGCATCC
AATTAGGCCCATTCGGGGGTTTGCTTGCATGTTTTTCTATTTT-CTGTTCTGATTTAATTTAGGCAGTAAATCATAATGC
TGAAACTTTTTGTGGAAGCTAATTAAATTATTCTAGAGCCAAACAATTAAGGTTAGAATTTTTTTGGAGCTGTTAAATAT
TTAATAGCAATTTAATTAATCCAATTCAAATACACCGTGATTTAAATCAAAGACCAAAATGTCATGGAAAATGTGCCTCA
GCTCTGGTAGAGGTTTACACCTGGTGCCAAAATGAATGAACATTTTTTAAGGGCATTACATTGAGAAAAAAA-TAATTTG
TCT-AAAAAAA-TGAAGGGTGGAAAATGCACAAAAAATTGGTGCGGCTAGGGACTCGAACCCAGGACCGCGTGGGTTTGT
GGTGTTTAGGGCTGCGCTGTTAACTACTAGGACAGATGGCAAGACTTTGACATGGGTAGGGAAGGAAGGTATACATAGTG
AGACTGTGAAATTTGT-CAAAAACA--A---TAGTGAGACCGTGAATGTTTGCACACGCGTGAGAGTGGTTTTCCTTTGT
TTTGCACTGAAATTTTGGTGGGTTGGAAAGTTG--AACGTATGTTTGCACTGCCACATGATTTTGGTTAGAGTGGCACTT
GGTTTAGGGTTAGAGTGGCACTTGGTTTAGGATTTAAAGGGAATAAATTTGCATGTTAGTTCATGACTT----TTTTTGA
ATGAAACAGAGGGCTTC------
>SNPs
-----------------------------------------S------S-----------------------S-------
------------------------S------------------S-----------S-------------S----------
----S------------------------S------S-----S-------------------------------------
------------SS----------S-S---------------S-----S-----SSSSSSS-------------------
------------------------------------------------------S---------S--------S------
-S---------S-----S------S----------------S-------S-S--S-----S----SSS------------
------------------------------------------------------S--------------------SS---
--------S--S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
----------------------------------------------------S---------------------------
-----------------------------------------------------------------------S--S-----
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-------------------S------------------------------------------------------------
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-S------------------------------------------------------------------------------
-----------------------------------------------------S-----------------S--------
--------S-----------------------------------------------------------------------
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----------------------S-----------------------------------------------S---------
-------------------------------------------------S------------------------------
-----------------------------------------------------S--------------------------
----------------------------------------------------------------S---------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
S----S-------------------------------S------------------------------------------
------------------------------------------------------------------------S-------
-----------S-------S------------S-----------------------------------------------
----------------------------SSS--------------------------S----------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>forward_586
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------CAGGGCAGATTAGCACGAGT------------------------------------------------------
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>reverse_2332
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-----------TTGCGCTGATAACTGCTAGGA------------------------------------------------
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-----------------------
