>input_sequence_76482
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-------------------------ATGGGTCGTCCCGATTCCGAGGCGCCGACGTCCAGCGTCGCCGCGGGGCTGGCTG
CCGCCCTCGGAGGCAGGGAAGGCGCGGCGGCGCC------AGCGGGGGCAGACTCGGCGTTCGAAACCAACGTGGTGATC
ATCTTGGCCGCGCTCTTCTTCGCGCTGCTCTTCGCCATCGGGCTCCACTCGCTGGCGCGGTGCGCGCTCCGGTACGTGGG
CCGCGGGGCCGCGGCCGCTGTCGCTGCCGGCGAGGGCAGGGCGTCGGCGCAGGTGGCCTGCAGCGGCAGCGGCATCAAGG
GGCGCGTCCTGAGGAGCCTCCCCGTGGAGGTGTACGGCTCCGGGGAGGACATCGACGACGTGTGCGCCATATGCCTGAGC
GAGTTCGTGGACGGCGAGAAGGTGCGCGTGCTCCCGCTGTGCGGGCACGGCTTCCACGTTCGCTGCGTAGACACGTGGCT
GGTGTCCCACGGCTCCTGTCCCACGTGCCGGCGACCGGTGGTCGAGG-GCGCGCCCGCGAAGAGTC--------------
---------AGACGGACACGGTCATCACCGTGGTCATCGCCTGA------------------------------------
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-------
>chr5D_1_TraesCS5D01G315200
CATGATACTTAAAAAAGAGTACACACCATACAAAACGAGAAGAAAGGAAATATGAAAACAAGTGCTTAATAGTCTAATCA
TTTGGACAAAGACAACAAGTTTTATTCCCTCGCAAATTATCATGCATGGCCAAAGTCCCTTCAAAACGTGGCCTCTGG--
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--------------------TACATATTACCACTCTTTGTTGTTTGAATGAAAA--AAGTGCACATGTCAGTTTTTCGAG
AAAAAAAATACCTAGA------CCTCCC-AAAAATGGAAGTAGAGCTTTTTATCTTCAAAATAATTTCAACGTTTATGC-
GGGGTTAAAAAGCCTT-TCATTCCATTTTGACATTGAGAAAAAATATCTTCGTCAAGAGCTACCCAAATATTGATTTTAC
TCAATTGC------------------------------------------------------------------------
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-----------AGGTACTTGCTGTAGACAATTGAGTAAATCGACATTTCTGACATTTAGATCTTGAATTCCTAATCCTCT
TGGTATGTGGGGAGGCTAGGGAAATAAATTCACGATCAAAATTCAAAAATACCGATATTTTTTATGTAGAG--ATGGAGT
ATTTCTATCTATCCCTTCCGTGAGCAAAAAAG------------------------------------------------
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-----------------------------------------------ATG------------------------------
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---------------------------------------------------------------------TGCTTATGCTT
TCGCTTCTTTTTAACAGGGCGCTCCGGCAGTAGGGACGCGTACAACGTAAATACGCATATACTCCTATATATGCACTTTT
GACAAGGAGTGGGGACAGGCACCCCGTACGTCCACATTCGTG-----CCACTAACGGTCGTAGGCGTGAGCTTTCACTAA
CAGATGCACTTTGCCCAAACTCAGCCGCCTAGCAGCAGATCAGGGCGCAACTTGGCTGGGGAGCGCC--CTTTTACAAAG
TACACTCGCACCAGAACAATGGTGGGCACCTCGATCGCGCCCTCCTATA-TATAC------CCCACGGACAGAGCAGAGA
ACGACAGACATACAGAGACAGACAACACAGCCACC-----AATCCAGTTCGAA---------------------TATACT
CCTACTAGCTTGAAGCATCG------------A---CCGATCGACG---------------TGCCGGGTGGACATCT---
CTTGGATTACATAACTTCATCAACCATGGGTCGTCCCGATTCCGAGGCGCCGACGTCCAGCGTCGCCGCGGGGCTGGCTG
CCGCCCTCGGAGGCAGGGAAGGCGCGGCGGCGCC------AGCGGGGGCAGACTCGGCGTTCGAAACCAACGTGGTGATC
ATCTTGGCCGCGCTCTTCTTCGCGCTGCTCTTCGCCATCGGGCTCCACTCGCTGGCGCGGTGCGCGCTCCGGTACGTGGG
CCGCGGGGCCGCGGCCGCTGTCGCTGCCGGCGAGGGCAGGGCGTCGGCGCAGGTGGCCTGCAGCGGCAGCGGCATCAAGG
GGCGCGTCCTGAGGAGCCTCCCCGTGGAGGTGTACGGCTCCGGGGAGGACATCGACGACGTGTGCGCCATATGCCTGAGC
GAGTTCGTGGACGGCGAGAAGGTGCGCGTGCTCCCGCTGTGCGGGCACGGCTTCCACGTTCGCTGCGTAGACACGTGGCT
GGTGTCCCACGGCTCCTGTCCCACGTGCCGGCGACCGGTGGTCGAGG-GCGCGCCCGCGAAGAGTC--------------
---------AGACGGACACGGTCATCACCGTGGTCATCGCCTGAG--------TTCATCATGCAACGAAGC--A-TGCCA
TTGCTGCCGGCACAGCACAGCCCTGCATGCGCAAGCTCCGGCG-AATTTTCAAGCGCTGATTACTAGTGGAA---TGTAT
GT-----ATGATTGAAATGCTCAATTGCTCATGTAAATATTCAGCGGCGCAAAGTGCTTTCCTGACAAACTATGAGTAAA
CAATTTTGCTGAATTACTTTGCTCCAGTTTTCAATTCTCC-------GCCACCGTCGACAAGTAGGGTGCCCGGTGACGC
CGAGTCGTCGATGGATGGAG---GACGACTAAAACA---GTTCAACCGACCACTTTTATGCTCTTATTTTTTGCGGGTAC
CACTTTTATGCTACTCTCTCCGTTCCATTATGTAATGCATATAGATTAATTTTT---------TTTACAAAATTTGACCA
AATTTACAGAGAAGATTATTTATATCTAT-AATATGAAATATATACGTTTGAAAGTAGGTCTTGTGATGTATCTAATGAT
ATGCATTTGGTATTTTAGATGTATATATCTTCTTCTCTACAAACTTGATCAATATTTGTAAAGTTTGACTTAAGAAAAAT
ATATACACACACTACATTGTGGAACAAAGGGAGTAGTACTCTCAGCTTAGGACCGGAGACCCTTCACGGAAGTGCCTTGT
ATTGACATCACGGAGGCGGTGGTGTGCGGTATGGTCGCGGTCATATAGTTGGTCCTCTTCTTCCTTGTTAACTTCATTGA
CGCCCAATTTTGAATAGAATCAAAATTCTCCTCGGGTACTTTTCATATATGCTTTGCTTTCTACCAAAAACC--------
--------------------------------ATGTATATCTACAACTAACAGAATAAACAAGGAATATTGTGTTTAAAT
GAGCGTAAAAATTAGTGTAAAAAATCAACTCATCAACAACACCTTCAAGAAGGAATCGACGCTCCCACGCCGATGCTAGT
TGGTCAAATAAGAAGTTAGACCAATGACTACCACCCGACAAACGGAATCTCGAACCAACACCTTCCGCAAGACAACAACT
TACTGTG
>chr5A_1
CATGATACTTAAAAAAGAGTACAAACCATACACCACGAGAACAATGGAAATCTGAAAACAAGTGCTTAATAGTCTAATCA
TTTGGACAAAGGAAACAAGTTTCATTCCCTTGCAAATTATCCTGCATGGCCACACTCCCTTCAAAACGTGGCTTCTGG--
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--------------------TACATATTACCCCTCTTAGTTGTTTGAATGGAAAGAAAGTGCACGTATCAGTTTTTCGAG
AAAAAAATTACCTTTGTCAAGCCGTCCCAAAAAATGGAAGTAGAGCTTTTTATCTTCAAAATAATGTTGACATTTATAT-
GGGGTTAAAAAGCCTTTTCATTCCTTTTTGACAT---GAAAAAAAATATTCGTCAAAAGCTACCCAAATATTGATTT-AC
TCAATTGT------------------------------------------------------------------------
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-----------AGAGGAA---TGTAGACAATTGAGTAAATCGACATTTCTGACATTTAGATCTTGAATTCCTAATCCTCT
TGGTATGTGGGGAGGCTAGGGAAATAAATTCATGATCAAATTTCAAAAATACCGGCATTTCC----TATGTACATGGAGT
ATTTCAATCTATCTCTTTCGTGAGCTAAAAAGGAAGTGCGCTTAGAGCATCTACAACCCGATTTGGCAAATCCGGCCCCT
CAAATGCCCGCGGACGCGCCCGGGCGCGTCCGTGGGCACTGACCGGGCATGCCTTAAATTGGACACATTGCATCCACTCT
CATATTTGATCCCCTAAATCCATACAAAGCATGCAAAAGAAATCCTACGTACTACATCTACATACTATCGTAGCTACTCT
TCGATGAAAGAGATGTCCAGGACGACGGTGCCGGACGCCAGCTGGACGGGCGGGTAGGAGGGCGCCGGCTCATCCTCCTT
CTGCTCGACCTAATCCATGTAGGTGAGCATCTCCTCCTCGTCCGCGGCCTCTTGCGGCTCCATCTCCTACCGGCGACGCA
TCTTGCCTCCGCAACCGAGTCCGACTGAAGGGAATCGAGAATGGCCTGCTACTCCGTCTGCAGATTCCTGTCACCAGCGT
CCCCCACATCCTCCTCCTCCAGCTCATGCCCCTCCTCCTCCAACTCCTCTTTCGGATCCACTTCATTTGGAGGTAGCCCT
GCGGCGATCCGGGCTTCGCGCCTAGCCCGGATCTACTCAAGGAGCTCCAACCGGCGCTCCGGCGTCAGAAATGGCTCGCT
CCTCACCCGGTGGCATGAGGGCATGGCTACTAGGCGAACGGGTGGAGTGAAAAGTGGCGGCGGCGATGGACAGGGGAAGG
AAAATATGGATGCATGGTAGGGTTTTGATGCCGCCGATCGACTTAAATAGCCGGGCAATGCACTACGCGGCCCGCTGGAG
CTACGCCACGCGGCACCACCGGTCCGATGAAGGAGTCGAGTTTCGGACCACCGGGTTTGACGGTGTTTTCGGCCGGGACC
CCTTCGTCAATCCGACGTGGCTGGCGTGCTCGGCCGCGCCTGGGCGCCCTCATATCCGCCCATATTTAGGCTGGATATGG
GGGTGCCGGTCAGCCCGGACGTTTGAGGCACATTTAAGACGTTCATCGGGGTCGAAAAAATATGACCGGTCAATGACTCG
GCGGCCCGCCTGAACATATGAGGCGGGTTTGAGAGGTCCAGCTATAGATG------------------------------
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---------------------------------------------------------------------TTCTTAAGCTT
TTGCTTCTTTTTAAGAGGGCCCTCTTGCGGTAGGGATAGGTACAACGTAA---------TACGTATATTTATGCGCTTTT
GACAAGGAGTGGGGACAGGCACCCCGTACGTCCACACTCGTG-----CCACTAACGGTCGTAGGCGTGAGCTTTCACTAA
CAGATGCACTTTGCCCAAACTCAGCTGCCTAGCAGCAGATCAGGGTGCAACTTGGCTGGGTCGCGCC--CTTTTACAAAG
TACACTCGCAGCAGAACAATGGTGGGCGCCTTGATCGCGCCCTCCTATATATACCCCATGTCCCATGAACAGAGCAGAGA
ACGACAGACAGACAGAGACAGATAACACAGCCACC-----AAA-------------------------------------
--------------GCATCGACCGATCGGCGTG---CCGGGTGAA--CTGTGAGTTGATCGAGCTGGGTGGACATTT---
CTTGAATTACATAACTTAATCAACCATGGGTCGTCCTGATTCCGAGGCGCCGACGTCGAGCATCGCGGCGGGGCTGGCTG
CCGCCCTCGGAGGCGGGGGAGAAGCGCCGGCGCC------GGCGGGGGCAGACTCGGCTTTCGAAACCAACGTGGTGATC
ATCCTGGCCGCGGTCTTCTTCGCGCTGCTCTTCGCCATCGGCCTCCACTCGCTGGCACGGTGCGCGCTCCGGTACGTGGG
GTGTGGGGCTGCCGCCGCTGTTGCTGCCGGCGAGGGCAGGGCGTCGGCGCGGGTGGCCTGCAGCGGCAGCGGCATCAAGA
GGCGCGTCCTCAGGAGCCTCCCCGTGGAGGTGTATGGCTTCGGGGAGGTCATCGACGACGTGTGCGCCATATGCCTGAGC
GAGTTCGTGGACGGCGAGAAGGTGCGCGTGCTGCCGCTCTGCGGGCACGGCTTCCACGTCCGCTGCGTCGACGCCTGGCT
GGTGTCCCACGGCTCCTGTCCCACGTGCCGGAGGCCGGTGCTCGAGG-GCGCGCCCGCGAAGAGT---------------
--------GAGACGGACACGGTGATCACCGTGGTCATCGCGTGAG--------TTCATCACGCAACGAGGC--A-TGCCA
TTGCTGCCGGCACGGCACAGCCCTGCATGCGCAAGCTCCTGCGGAATTTTCAGGCGCTGATTAATAGTGGAG---TGTAC
AA-----ATGATTGAAATGTTCAATTGCTCGTGTAAATATTCAACGGGGCAAAGCGCTTTCCTGACATCCTATGAGTAAA
CAATTTTGCTGAATTACCTTGCTCCAGTTTTCAATTCTCCTTTCTCCGCCACCGTCGATAAGTAGGGTGGCCCGTGACGC
CGAGTCGTCGATGGATGGAG---GACGACTAACTGCCCCGTTCAACCGACCACTTTG-----------------------
-------ATGCTACCCTCTCCGTTTCACAATGTGCGGCATATCGATTTTCTAAAGAAGTTAAATTTACAAACTTTAATCA
AGTTTATAGAGAA-ATTATTTATACCTAT-AATATCAAATATATATAATTGAAAGTATGTCTTGTGAT--ATCTAGTGAT
ATGCATTTACTATTCTATAGATGTATATATTTTTCTTTACAAACTCGATCAAAATTCATGAATTTTGACTTA--AAAAAA
ATCTATACACACTAAATTGTGGAATGGAAGTAGTAGTACTCCCAGCTTAAGACCGGGGACCCTTCACAAAAGTACCTTCT
GTTGACGTCACAGAGATGGTGGTGCGCGGTATGGTCGCGGTCGTAACGTTGGTCCTCTTCTTTTCTGTTAACTTCATGGG
CGCCCAATTTTGAATGGAATCAGTATTCTCCTCGAGTACTTTTCATATATGTTTTGATTTCTACCAATATATATATATAT
ATATATATATATATATATATATATATATATATATATATATCTTCAAGTAATAAAATAAACAAGGAATATCGTGTTTAAAC
GAGCGTAAAAATTAGTGTAAAAA--CAACTCATCAACAACACCTTCAAGAAGGAATCAGCGCTCGCACGCTGATGCTAGT
TGGTCAAATGAGAAGTTAGACCAACCACTATCACCCTCGAAATGGAATATCGAACCAACACCTTCCACAAGATAACATCT
TAC----
>chr5B_1
CATGATACTTAAAAAAGAGTACAAACCATACAACACGGGAAAAATGGAAAGCTGAAAACAAGTGCTTAATAGTCTAATCA
TTTGTACAAAGGAAACAAGTTTCATTCCGTTGCAAATTATCCTGCATGGCCACACTCCCTTCAAAACGTGGCTTCTGGTA
CGAACGAGACTTGCCTGCTCCTCGCGCGTGCGCCCATCCGTTCTTCCGCGTATGTGGCTTGATTTGATTGGAACAAAACA
GGCAAGCCGGATCCTTCTAGTACATAGTACCCCTCTTTGTTGTTTGAATCGAAAGAAAGTGCACATGTCAGTTTTTCGAG
AATTTTTTTACCTTTGTCAAGCCCTCCC-AAAAATGGAAGTAGAGCTTTTTATCTTCAAAATAATGTTGACATTTATACG
GGGTTAAAAAAGCCTTTTCATTCCTTTTGACATCGAG--AAAAAAATATTCGTCAAAAGCTACCCAAATATTGATTT-AC
TCTTCTTTTTTGCGGGAAAAACTTCCAATCTATTCATCTTCAATCATGGTAGTACAACGAACACTGAAAATAATAAAAAA
TTACATCCAGATCCGTAGACCACCTAGCGACGACTACAAGCACTGAAGCGAGCCGAAGGCGCGCCGCTGTCATCGCCCCT
CCCTCGCCGGAGCCGGGCAAACATTGTTGTAGTAGACAGTCGGGAAGTCGTCATGCTAAGACTCCATAGAACCAACGCAC
CAGAACAGCAACCGCCGCAGATGAAGAGTGTAGATCAAAAGGATCCAACCCGAGGACAAACAAACGAACATGAACGACGA
ACAGATCCGAGCAAATCCACCAAAGACAGATCTTCGGAGACACACCTCCACACGCCCACCGATGATGCTAAACGCATCAC
CGGAACGGGGGCTAGGCGGGGAGACCTTTATTCCATCTTCAGGGAGCCGCCGCCGTCTCACCTTCCTGAGCAGGATACAA
ACCCTAACAAAGCTTGAAAAGAGATCTAAAAACGAAGCCCTCCCACCGGCAAGGGTTGAGATCCACTCCGTCTCCATGGC
CCTAAGGCCACCGGAGACAGGACGGACCGGCGCCAGCGCCGGCGGGAGGCAGAAAACCTTAGGTTTTGGAGGTGGCGGCT
GCCTAGGTCAAAGGTATTTACTGTAGACAATTGAGTAAATCGACATTTCTGACATTTACATCTTGAATTCCTAATCCTCT
T-GTATGTGGGGTGGCTAGGGAAATAAATTCACGATCAAATTTC-AAAATACCGGTATTTCCTACGTATGTACATGGAGT
ATTTCAATCTATCTCTTCCGTGAGCAAAAGAG------------------------------------------------
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-----------------------------------------------AAGTGTGCTTATGCTTTCGCTTCTTAGAGTTGA
GCATAATACAACGCAGACCCCTGTTTTCCTCTCGTCCCTGGCGGCTGGAACCCTAGCCGCCGCCAGGGGGAGGCCGATCT
TCCAACACCGCTCTCTGGCGGCTCCCATCCGCCGGCGACCTCGGTCGTCGGTGGTTAGGGGAATCGCCGGATCCACGCGT
GTGGATCATTTTTACTCTCTTGTAGTCTAGGTTTTTAGGTTGTTCATCGTCTTTGCTTTGGCAGCGACGATGACAACGCT
GAATAAAGATTCTTCAGATCCTTCCTGACGAGGCCATCGGTCCTATGGTTGGGGATGAATTTGGAAACCAGTATGTTCAA
GCAAGGATGGTGCGGCGGCGTGTCATCCTCGTGGTGGACCTGTGTCCTCGGGCTCCGCCGTTGCGACGACGTTTGCTCCA
GCGTCGGCGCGGAGCTTGGGAGGTAGTCCAGAAGCGGATGCAGATTGTGGTCTGCATCGACGACATCTGGAAGACGGAGC
ATGTGCTGGGCTCGTGGTTGGTGGATGGCAGATATGGTTTCCTCCTTCGGCGTTTTAGTCGTGGTGAGTTGCTAGATCTG
GAGTTCGATGGCGTGTCCGGGGTGTTGCCCCGGTCTGATTCGTTCAATGGTAAGGGTTTCACTTTTGCTGAGCCACCTTG
GAGGTTCGTAAAGCTGCATATCAGCGATGGAGCCACGTCGAGCTCAGGTAAGGAGGTGATTCGTCATTATTTTCTTCGGT
GGCTACTGTGGTGGTGCCGGAGGCAGGTGAGGACGTTGGTGTCAAGCTCAGAGATGTTCTGTTATCTTTTCAGTTTTGTC
ATATCGGTCTTTACGTGACTTGTATTTTGTTCTTTATGATATGAATGAGACACGTATTATCATGAATTTTTTTTATGCTT
TCGCTTCTTTTTAAGAGGGCCCTCCGGCGC-AGGGACGGGCACAACGTAA---------TACGCATATTTATGCACTTTG
ATAA--GAGTGGGGACAGGTACCCCGTACGTCCACATTCGTTCAACTCCACTAACGGTCGTAGACGGGAGCTTTCACAAA
CAGATAGACTTTGCCCAAACTCAGCTGCCTAACAGCAGATCAGGGTGCAACTTGGCTGGGGAGCGCCCGCTTTTACAAAG
TACAGTCGCAGCAGAACAATGGTGGGCACCTCGATCGCGCCCTCCTATA-TATAC------CCCAGGAACAGAGCAGAGA
ACGACAGACAAGCAGAGACAGACAACACAGCCACC-----AATCCAGTCCGAA---------------------TATA--
-CTACTAGCTTGAGGCATCGACCGATCGGCGTG---CCGGGTGAA--CTGTGAGTCGATCGAGCTGGGTGGACATCT---
CTTGGATTACATAACTTCATCAACCATGGGTCGTCCCGATTCCGAAGCACCTACGTCGAGCGTGGCCGCGGGGCTGGCTG
CTGCCCTCGGAGGCGGGGAAGGCGCGGCGGCGCC------AGCCGGGGCTGACTCGGCTTTCGAAACCAACGTGGTGATC
ATCCTGGCCGCACTCTTCTTCGCGCTGCTCTTCGCCATCGGGCTCCACTCGCTGGCGCGGTGCGCGCTCCGGTACGTGCG
GCGTGGTGCTGCGGCCGCTGTTGCTGCCGGCGAGGGCAGGGCGTCGGCGCGGGTGGCCTGCAGCAGCGGCGGCATCAAGC
GGCGCGTCCTGAGGAGCCTCCCCGTGGAGGTGTACGGCTCCGGGGAGGACATCGACGACGTGTGCGCCATATGCCTCAGC
GAGTTCGTGGACGGCGAGAAGGTGCGCGTGCTGCCGCTGTGCGGGCACGGCTTCCACGTCCGCTGCGTCGACGCCTGGCT
GGTGTCCCACGGCTCCTGTCCCACGTGTCGGCGGCCGGTGGTCGAGG-GCGCGCCCGCGAAGAGT---------------
--------GAGACGGACGCGGTCATCACCGTGGTCATCTCGTGAG--------TTCATCACGCAACGAAGC--A-TGCCA
TTGCTG-CGGCACGGCACGGCCCTGCATGCGCAAGCTCCTGCGGAATGTTCAGGCGCT-ATTACTAGTGGATTATTGTAA
AT-----GTGATTGAAACGCTCAATTGCTCGTGTAAATATTCAACGGCGCAAAGCGCTTTCCTGGCATACTATGAGTAAA
CAATTTTGCTGAATTACTTTGTTCCAGTGTTCAATTCTCC-------GTCACCATCGACAAGTAGGGTAGCCCGTGACGT
CGAGTCGTCCATGGATGGAGGACGACTACTAACTGCTCTGTTCAACCGACCACTTTT-----------------------
-------ATGCTACTCTCTCCGTTCCGTAATGTGCCGCATATCGATTTTCTAA-GAAGTTAAATTTACAAACTTTAATCA
ACTATATAGACAA-AAATGTTTGTATCTGCAATACCATATATATACAATTGAAAGTATGTCTTGTGATGTA---------
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>chr5D_827
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-------------------------GCACATCGTCCGCGCCCCCCTATATTATAA------CCCACGAACAGAGCAGAGA
ACGACAGACAGACAGCAG-------------------------CCAGTTCGAAACAACAACCATA--TTTCATCTA----
-------GCTTGAAACAGAG------------G---CCGGGTGAA--CTCT---------CTGCTCGATCGACATCT---
CCCGAACTATATAACTTCATCAACCATGGTTCGTCCTGATTCGGAGGCGCCGGCGCCGAGCGTTGCC-------------
-----TACGGAGGCAGCGGAGGCGCCGCGGCTCCGGCGGGGACGAGGGCAGACTCGTCTTTCGAGACCAACGTGGTGATC
ATCCTGGCCGCGCTCTTCTTCGGGCTGCTCCTCATAATCGCACTCAACTCGCTGGCGCGGTGCGCGCTCCGGTACGTGGG
GCGCGGGGCCGCGCC------CGCTGCCGGCGAGGGGCGGGCGTCGGCGCGGGTGACCTGCAGCGGTAGCGGCATCAAGA
GGCGCGTCCTGAGGAGCCTCCCCGTAGAGGTGTATGGCTCCGGGGAGGACATCGACGACGTGTGCGCCATATGCCTGAGC
GAGTTCATGGACGGCGAGAAGGTGCGCGTGCTGCCGCTCTGCGGGCACGGCTTCCACGTCCGCTGCGTCGACGCCTGGCT
GGTGTCCCGCGGCTCCTGTCCCACGTGCCGGCAGCCGGTCATCGAAG-GCGCGCCCGCGAAGGCG---------------
-----GCGGAGACGAACACGGTCATCACCGTGGTCATCGTGTGAG--------TCCATCTCGCGGCGAAGCATA-TGCCA
TTGCTGCCGGTACAGCACAGTCCCGCATGCGCAAGCTC------------------------------------------
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>chr5A_827
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-------------------------GCACCTGGCCCTCGGCCTCCTATA-TATAC------CCCACGAACGGCGCAGAGA
ACGACAGACAGACACGGATAGCGGCCAGCACAGGCATCAAAATCAAGTTCGAA---------------------TA----
-------GCTTGAAACAGAG------------C---CCGGGTGAA--CTCTGC-TCGATCCTGCTCGGTGGGCATCT---
CTCAGATTGCATAACTTCATCAGCCATGGGTCGTCCTGATTCGGAAGCGCCGGCGTCGAGCGTTGCC-------------
-----TACGGAGGCGGCGGAGGCGCGGCGGCGCCCGCGGCGGCGGGGGCAGCCTCGGCTTTCGAGACCAAAGTGGTGATC
ATGCTGGCCGCGCTCTTCTTCGCGCTGCTCCTCGTCATCGGACTCAACTTAATGGTGCGGGGCGCGCTCCGGCGCGTGTG
GCGCGGGGCCGCGGC------CGCTGCCGGCGAGGGCCGGGCGTCGGCGCGGGTGGCCTGCAGCGGCAGCGGCATCAAGA
GGCGCGTCCTCAGGGGCCTCCCCGTGGAGGTGTACGGCTGCGGGGAGGACATCGACGACGTGTGCGCGATATGCCTGAGC
GAGTTCGTGGACGGCAAGAAGGTGCGCGTGCTGCCGCTCTGCGGGCACGGCTTCCACGTCCGCTGCGTCAACGCCTGGCT
GGTGTCCCACGGCTCCTGCACCACGTGCCGGCAGCCGGTCATCGAAG-GCGCGCCCGCGAAGGCA---------------
-----GCGGAGACGAACACGATCGTCACCGTGGTCGTCGTGTGAG--------TCCATCTCGCGGCGAAGC--A-TGCCA
TTGCTGCCGGTACAGCACACCCCTACATGCGC------------------------------------------------
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>chr5A_839
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-------------------------------------CGCCCTCCTATA-TATAC------CCCACGAACAGAGCAGAGA
ACGACAGACAGACAGCAA-------------------------CCAGTTCGAAACAACAGCCATAACTTTCATCTA----
-------GCTTGAAACAGAG------------G---TCGGGTGAA--CTCT-----------GCTCGATCGACATCT---
CCCGGAGTATATAACTTCATCAACCATGGGTCGTCCTGACTCGGAGGCGCCGGCGTCGAGCGTTGCC-------------
-----TACGGAGGCAGCGGAGGCGCGGCGGCTCCGGCGGGGACGAGGGCAGACTCGTCTTTCGAGACCAACGTGGTGATC
ATCCTAGCCGTGCTCTTCCTCGGGCTGCTCCTCATAATCGCAGTCAACTCGCTGGCGCGGTGCGCGCTCCGGCGCGTGGG
GCGCGTGGCCGCGGC------CGCTGCCGGCGAGGGCCGGGCGTCCGCGCGGGTGGCCTGCAGCGGCAGCGGCATCAAGA
GGCGCGTCCTCAGGAGCCTCCCCGTGGAGGTGTACGGCTCAGGGGAGGACATCGACGACGTGTGCGCCATATGCCTCAGC
GAGTTCGTGGACGGCGAGAAGGTGCGCGTGCTGCCGCAGTGCGCGCACGGCTTCCACGTCCGCTGCGTCGACGCCTGGCT
GGTGTCCAACGGCTCCTGTCCCACGTGCCGGCAGCCGGTCATCGAAG-GCGCGCCCGCGAAGGCG---------------
-----GCGGAGACGAACACGACCGTCACCGTGGTCATCGTGTGAGACTGTGAGTCCATCGCGCGACCAAGC--A-TGCCA
TTGCTGCCGGTACAGCACAGTCCCGCATGCGCAAGCTC------------------------------------------
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>chr5B_840
GCCCT---------------------------------------------------------------------------
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---------------------------------------------TATA-TATAC------CCCACGAACGGAGCAGAGA
ACGACAGACAGACACTGATAGCGGCTAGCACAGGCATCAAAATCCAGTTCGAA---------------------TA----
-------GCTTCAAACAGAG------------GAGGCCCGGTGAACTCTCTGC-TCGATCCTGCTCGGTGGGCAGCT---
CTCAGATTATATAACTTCATCAACCATGGGTCGTCCTGATGCGGAAGCGCCCGCGTCGAGCGTTGCC-------------
-----TACGGAGGCGACGGAGGCGCGGCGGCGCCCGCGGGGGCGGGGGCAGACCCGGCTTTCGAGACCAACGTGGTGATC
ATCCTGGCCGCGCTCTTCTTCGCGCTGCTCCTCGTCATCGGACTCAATTTAATGGTGCGGTGCGCGCTCCGGCGCGTGTG
GCGCGGGGCCGCGGC------CGCTGCCGGCGAGGGCCGGGCGTCGGCGCGGGTGGCCTGCAGCGGCAGCGGCATCAAGA
GGCGCGTCCTCAGGAGCCTCCCCGTGGAGGTGTACGGCTCCGGGGAGGACATCGACGACGTGTGCGCCATATGCCTGAGC
GAGTTCGTGGACGGCGAGAAGGTGCGTGTGCTGCCGCTCTGCGGGCACGGCTTCCACGTCCGCTGCGTCGACGCCTGGCT
GGTGTCCCACGGCTCCTGTCCCACGTGCCGGCAGCCGGTCATCGATG-GCGCGCCCGGGGAGGCG---------------
-----GCGGAGACGAACACGGTCATCACCGTGGTCATCGTGTGAG--------TCCGTCTCGCGGTGAAGC--A-TGCCA
TTGCTGCTGGTACAGCACACTCCCGCATGCGCAAGCTC------------------------------------------
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>chr5D_845
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-------------------------------------------CCTATA-TATAC------CCCACGAGCGGAGCAGAGA
ACGACAGACAGACACGGATAGCGGCTAGCACAGGCATCAAAATCCAGTTCGAA---------------------TA----
-------GCTTGAAACAGAG------------GAGGCCGGGTGAA--CTCTGC-TCGATCCTGCTCGGTGGGCATCT---
CTCAGATTATATAACTTCATCAACCATGGGTCGTCCTGATTCGGAGGCGCCGGCGTCGAGCGTTGCC-------------
-----TACGGAGGCGGCGGAGGCGCGGCGGCGCCCGCGGGGGCGGGGGCAGACTCGGCTGTCGAGACCAACGTGGTGATC
ATCCTTGCCGCGCTCTTCTTCGCGCTGCTCCTCGTCATCGGCCTCAACTTAATGGTGCGGTGCGCGCTCCGGCGCGTCTG
GCGCGGGGCCGCGGC------CGCTGCCGGCGAGGGTCGGGCGTCGGCGCGGGTGGCCTGCAGCGGCAGCGGCATCAAAA
GGCGCGTCCTGAGGAGCCTCCCCGTGGAGGTGTACGGCTCCGGGGAGGACATCGACGACGTGTGCGCCATATGCCTGAGC
GAGTTCGTGGACGGCGAGAAGGTGCGCGTGCTGCCGCTCTGCGGGCACGGCTTCCACGTCCGCTGCGTCGACGCCTGGCT
GGTGTCGCACGGCTCCTGTCCCACGTGCCGGCAGCCGGTCATCGATG-GCGCGCCCGCGAAGGCG---------------
-----GCAGACACGAACACGGTCATCACCGTTGTCATCGTGTGAG--------TCCGTCTCGCGGCGAAGC--A-TGCCA
TTGCTGCCGGTACAGCACACTCCTGCATGCGCA-----------------------------------------------
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>chr5A_965
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------------------------------------------------------------------GGTGGACATCTCTC
CTCAGATTACATAACTTCATCAACCATGGGTCGTCCTGATTCGGAGGCGCCGGCGTCGAGCGTCGCC-------------
-----CACGGAGTTGGAGGAGGCGCGCCGGCGCC------CGCGGGGGCGGACTCGGCTTTGGAGACCAACGTGGTGATC
ATCATGGCCGCGCTCTTCTTCGGACTGCTCCTCGTCATCGCGCTCAACTCGCTGGTGCGGTGCGCGCTCCGGCGCGTGTG
CCGCGGGGCCGCGGC------CGCTGCCGGCGAGGGCCGAGCGTGGGCGCGGGTGGCCTGCAGCGGCAGCGACATCAAGA
GGCGCGTCCTCAGGAGCCTCCCCGTGGAGGTGTACGGCTCCGGGGAGGACATCGACGACGTGTGCGCCATATGCCTGAGC
GAGTTCGTGGACGGCGAGAAGGTGCGCGTGCTGCCGCTCTGCGGGCACGCCTTCCACGTCCGCTGCATCGACGCCTGGCT
GGTGTCCCACGGCTCCTGTCCCACCTGCCGGCGGCCGGTCATCGAGAAGGGCGCCAGCGGCGGTGTCGTCGAAAGCCAGC
GCCCTGCGGAGACGGATACGATCATCAACGTGGTGATCGTGTGAG--------TTTTTCGCGCGACGAAGC--ATTGCCA
TTTCTGCCGACACAGCACAGCTCTGCATGCGCAAGCTATCGTGGATGTTTCCGGCGCTGCTTTTGACCGGAA---TGTAT
ATACAGTATGATCGAAATGCTCAATTGTTCATGTAAATATTCAACGGCGCAAGCGCTGCGCA-GACATACTATAAGTAAA
CAGTTTTGCTGAATTACTTCGCTCC-------------------------------------------------------
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>chr5B_969
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----------------------------------------------------------------------GACATCT---
CCCGGACTGTATAACTTCATCAACCATGGGTCGTCCTGACTCGGAGGCGCCGGCGTCGAGCGTTGCC-------------
-----TACGGAGGCAGCGGAGGCGCCGCGGCTCCGGCGGGGACGAGGGCAGACTCGCCTTTCGAGACCAACGTGGCGATC
ATCCTGGCCGCGCTCTTCTTCGGGCTGCTCCTCATAATCGCACTCAACTCGCTGGCGCGGTGCGCGCTCCGGTACGTGGG
GCGCGGGGCCGCGGC------CGCTGCCGGCGAGGGCCGGGCGTCGGCGCGGGTGGCCTGCAGCGGCAGCGGCATCAAGA
GGCGCGTCCTCAGGAGCCTCCCCGTGGAGGTGTACGGCTCCGGGGAGGACATCGACGACGTGTGCGCTATATGCCTGAGC
GAGTTCGTGGACGGCGAGAAGGTGCGCGTGCTGCCGCTCTGCGGGCATGGCTTCCACGTCCGCTGCGTCGACGCCTGGCT
GGTGTCCCACGGCTCCTGTCCCACGTGCCGGCAGCCGGTCATCGATG-GCGCGCCCGAGAAGGCG---------------
-----GCAGACACGAACACGGTCGTCACCGTGGTCATCGTGTGAG--------TCCATCTCGCGGCGAAGC--A-TGCCA
TTGCTGCCGGTACAGCACAGCCCCGCATTCCCAAGCTC------------------------------------------
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>chr5D_1057
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-CGCCCACGGAGTTGAAGGAGGCGCGGCGGCACC------GGCTGGGGCGTACTCGGCTTTCGAGACCAACGTGGTGATC
ATCCTGGCCGCGGTCTTCTTCGGGCTGCTCCTCGTCATCGCGCTCAACTCGCTGGCGCGGTGCGCGCTCCGGCGCGTGTG
CCGCGGGGCCGCGGC------CGCTGCCGGCGAGGGCCGGGCGTCGGCGTGGGTGGCCTGCAGCGGCAGCGGCATCAAGA
GGCGCGTCCTCAGGGGCCTCCCCGTGGAGGTGTACGCCTGCGGGGAGGACATCGACGACGTGTGCGCCATATGCCTGAGC
GAGTTCGTGGACGGGGAGAAGGTGCGCGTGCTGCCGCTGTGCAGGCACGGCTTCCACGTCCGCTGCGTGGACGCCTGGCT
GGTGTCCCACGGCTCCTGTCCCACATGCCGGCGGCCGGTCATCGAGAAGGGCGCCAGCGGCG---TCGTCGACAGCCAGC
GCCCTGCAGAGACGAACACGGTCATCACCGTGGCGATCGTGTGAG--------TTTTTCGCGCGACGAAGC--A-TGCCA
TTTCTGCCGAT-CATCACAGTTCTGCATGCGCACGCTCTTGTGGAAGTTTCCGGCGCTGCTTACGACGGGAA---TGTGT
ATACAGTATAATCCAAATGCTCAATTGCTCATGTAAATATTCAACGGCGCAAAGCGCT----------------------
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-------
>SNPs
-----------------------S---------S-------S--S------S----------------------------
-----------SS---------S-------S----------S----------S-S-----------------S-------
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-------------------------------S------------------S-----------------------------
-------S-----SSS-------------------------------------------------S-SS--S-----S--
------------------------S---------SSS-------S--S--------S--------------------S--
-------S------------------------------------------------------------------------
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----------------S--S------------------------------------------------------------
----------------------------------------S-------------S-----SS--S---SSS---------
-----S-------S------------------------------------------------------------------
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----------------------------------------------------------------------S---------
--------------S-----S-------S---------S-----------SSSSSSSSS---S-S---S-----------
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-------------------------S-------------------S----------------------------------
----------S--------------------------------------------------------S------------
----------S-------------------------------------------------------------------SS
S-------------------------------S------SSS--SS------------------S---------------
---------------------------------------------------------S----------------------
----------------------------------------------------------S---------------------
---S----------------------------------------------------------------------------
--------------------------------------------------S----------------------------S
--------------------------------------------------------------------------------
--------------------------------S--------------------------S--------S---S-S-----
---------------------------------S-------------------------------S--------------
----------------------------------------S-------------------S-------------------
---------------------------------------S------------S---------------------------
S------------------------------------------S----------S------------S------------
---------------------------------------------------------------------S--S-------
--------------------------------SSSS---------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS---------------------S----SSS------S----SSS-SSS-----------------S---S-S--
-S----S------S----------S----------S----------SS---------S-----------------S----
--------SS----S--S-SS-S-----S--S----S--------S------S---SS-S--S---------SS-----S
--S--S--------S---------SSS-S-S----------S-------S------S----------SS----S----S-
S-----S----S---SS-------S-----------------S--SS---------------SSS------------S-S
---------------S------SS----------S----------------S----S----------S-SSS--------
----------------------------------S-------S---S---S-S----------------S---------S
-----------------------SS--------------------------------SS-----S-----S---------
---------S--------------SS----S-----SSS---S-----S-----------------S-----S----S--
---SSSS
>forward_3466
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------CACTTTGCCCAAACTCAGCC------------------------------------------------------
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>reverse_5385
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------------------------TGACTACCACCCGACAAACG------------------------------------
-------
