>input_sequence_76456
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-----------------------------------------------ATGGGTGACTACACAATCCGGATAAGCACCAGC
TTGATCGACCAGCTTTCGCGCGATGACGAGA---AGGTGAAAAGGAGGACCAGGAAACCCAAGCCGAAGAAGGTCGTGGA
GCAACAAGAGGAGCCTCGGGACAATGGCAGGGAACTTCCAAGCGAGCCCAAGAGCAGCCCTGCTCCCGCTCCTGGGTGGG
CGTTGCCGCCCCCCATGTACCTACCAGTGACCCCTGCTCCTCCACCACCCCCGCCGGCAATCCAGGAAGTGGAAACCATA
CACGCCGTGGTGGCGGAGAGCGAGAAGGTGCTGGAGAAGCTGCAGAAGCAGGAGGCGACGATGCATGAGGAGCTTACCAA
GAGGGCCAAGGAGCTGCACGAGAAGGAGTTCAAGCTGCCCTACCAGAACCCCTCACCGTGCACTGACGAGAGGGCGGGCT
GCGCCGAGTGTTACCAGAGCAACATCCAGGACCCGCTCAAGTGCGCCGAGGCGGTCAAGAGATTCGAGGCATGCGTCAGC
ATGGCGAGGCGGAGCGGCACCA------------TGGGGGCTGCTC------------------AGT-------------
--------------GA----------------------------------------------------------------
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>chr5B_1_TraesCS5B01G050700
GAGAACCCTCCCCAAAATAATGTTAGGACGTAGATCGAAACGTTGTGCATCTCTTGTCCTCTGTTGGCCAGATCTGCTAT
CTCTTCTCCTCAGGCTGGTGCGTGTTATGAGTTCTCCTCCGTCCCTCCCCTGTTTTTAGACCCCCCACCCCCAATCAATG
TCAGTGCATTGTGTCCCTCTTCTCCACTGCTTGCCAGATCTGGTGTCCCTTCTCCTTCAGTCCCTTGTTTGTTTCCACGG
CAGATCTCTCTACCTCCTCCATCAATGACATTGAGCTGCCATTAACATCTCCACGCGTGAAAACTCATCCAGATCTTTCT
TCTACAACCAATTCATCTGTCCAATTTGTCGCTGAGAGATCTGTTTGCTGCCTTCTTATCCTTGTGTTGTGAAGTACAGT
ATAATTATTATACATAAAGCAGTCAGCTTGCTTTCCGATTTTTAGATCCATCAGCCTCTGAAACAAGCGGGTTCCACCAT
CATTTGCTTCTGTAATAGCGGCCACCAGGTGAACTGCTGTTTCTTGAAACATGCAAACTAATGAGCTTTTATTTACTACC
GTACTTTGCACATGCTTATCTATGTCTGTAACATCTGAAAGCTTGAGAATAAAATGTTGATCGTGCTAATTGCTGACATT
TTAACTGGGAAGCATACCACATTTGTGGGTGTCCTCATCTTCTTAATGTAGAATTCTGTGCAGAGCCTACTTATTCATTC
ATTCTGTTACGCAACACTTTAACAGGAATGCACGAAACTTCCAAAATTCTAACTGGAAAGCATTGTGTGTATTCTGAATT
TGTTTGCTCATACTGTTATTGCCCCGTAATTCATTCTATTTAACATGTGGATAACACTGTACT-GAAAGCATTCACGATA
GATCCCAGATATTCATTCTACTTTGACATGCATGAGACTTTTGTTTCTTTGAA----CATCCAT--AACACTTGCTTTTT
AATCCCTGATTTTTGATTGCCGTGCTGTTTCAGGATTGTTGTCTGCCATGGGTGACTACACAATCCGGATAAGCACCAGC
TTGATCGACCAGCTTTCGCGCGATGACGAGA---AGGTGAAAAGGAGGACCAGGAAACCCAAGCCGAAGAAGGTCGTGGA
GCAACAAGAGGAGCCTCGGGACAATGGCAGGGAACTTCCAAGCGAGCCCAAGAGCAGCCCTGCTCCCGCTCCTGGGTGGG
CGTTGCCGCCCCCCATGTACCTACCAGTGACCCCTGCTCCTCCACCACCCCCGCCGGCAATCCAGGAAGTGGAAACCATA
CACGCCGTGGTGGCGGAGAGCGAGAAGGTGCTGGAGAAGCTGCAGAAGCAGGAGGCGACGATGCATGAGGAGCTTACCAA
GAGGGCCAAGGAGCTGCACGAGAAGGAGTTCAAGCTGCCCTACCAGAACCCCTCACCGTGCACTGACGAGAGGGCGGGCT
GCGCCGAGTGTTACCAGAGCAACATCCAGGACCCGCTCAAGTGCGCCGAGGCGGTCAAGAGATTCGAGGCATGCGTCAGC
ATGGCGAGGCGGAGCGGCACCA------------TGGGGGCTGCTC------------------AGT-------------
--------------GAGTCGGAGCAAGTGAGCGAGGTGTCGTACACATGATTTTGGTT-TGTCGGGA-------------
---------------------TGATTGAATAGCCTGAATGGATTTTC----G----GTGAGACCTGAAACACCATCAGTT
GTAGATTAAAATTCTGTCAAGGGATTGCACCGGTGCTGG----CAAGATGCCATGAGTGTCCTTGATGAATTTAGGGC-C
TGATTCCA--TGT-TTACTTGCATACTAGAAAATGAAACATGAATTT-GCATGGTTCG-AATTAATGTTTCCCGACGAGT
ATATTTAGGTAAAATGGCTGCTTTTCCTTGCAAAGTCGTGGCATGTTTAGGTAAAATAACTGTGCTCGTTTTGTTTGGGA
TGAGTTTGAA-TAACCATTATAGGTTGATTTAG-----------------------------------------------
-------------------------------------------------------------CTTCATA------TGCACA
TGATGCTGCTGCTGC-TTTGCTGGTTATTGGCAAAATCCATGTCTGAGTCGTTCATAA----------------------
AGAAAATGTAGAACCTTAT--------------ATAGGTGTTATTTTATAGGCATAAATATTTC----------------
----------------------------------------TGTTGAGATGCAACAACACTGGGGTACATGACAGGAATGT
TGTACACAACACACCCCCAGGGCCAGCAGGCAGCAGCAAACCAGATCAAGATCAGACCATCGCGGCCTAGGATGTCGATT
CAGAGATGCCCGACTCGACACCCTACACCGCAGGCCC--------------CGACACTTCTCGACCAAGAACAGAGCGAC
TGCGGCACAGTTAAGTTGTAGAAGCAATAACAGCCATTCCACT------AGCAGAGCAACAATCAAGGACCAGGCCTATC
ATCCAAGAAAATCCACAACACCCAAGCTGCAGAGTGCTGGAAAGTTTCTCAGACAAGTTATAGCCAGCACTGCCACAGTA
TCCCAGCAGATA------------------------------------AAGCCACAGTTGAAAAAGTATCTTGAACAAGT
TAAAAGGCCAGTGTCTTCTCATCAGTTAACCAAACAAATCAAAAACAGAGGCTAAATCTGTCAGCTGCCAACAGAGGACA
CATGTCGCCGTTAGCGCAAGCGACTAAATTTTGTGATACATTCTTAAGGGGGC---------------------------
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>chr5D_2
-AGAACCCTCCCCAAAATAATGGTAGGACGTAGATTGAAATGTTGTGCATCTCTTGTCATCTGTCGGCCAGATCTGGTAT
CTCTTCTCCTCAGGCTGGTGCGTGTT--------------GTCCTTCCCCTGTTTCTAGAG--------CCCAATCAATG
TCAGTGCATTGCGTACCTCTTCTCCACTGCTTGCCAGATCTGGTATCCCTTCTCCTTCCATCCCTCGTTTGTTTCCACGG
CAGATCTCTCTACCTCTTCCATCAATGTCATTGAGCTGCCATTAACATCTCCACGTGTGAAAACTCATCCAGATCTTTCT
TCTACAACCAATTCATCTGTCCAATTTGTCGCTGAGAGATCTCTTTGCTGC---CTTATCCTTGTGTTGTGAAGTTCAGT
ATAATTATTATACTTAAAGCAGTCAGCTTGCTTTCCATTTTTTAGACCCATCAGCCTCTGAAACAAGCGGGTTCCGCCAT
CATTTGCTTCTGTAATAGCGGCCACCAGGTGACCTGCTGTTTCTTGAAAGATGCAAACTAATGAGCTTTTATTTAC----
-TACTTTGCACATGCTTATCTATGTCTGTAACATCTGAGAGCTTGAGAATAAAATGTTGATCGTGCTAGTTGCTGACATT
TTAACTGGGAAGCATTCAGCATTTGTGGGTGTCCTCGTCTTCTTAATGTAGAATTCTGTGCAGAGCGTACTT----ATTC
ATTCTGTTACGCAACACTTTAACAGGAATGGACGAAACTTTCAAAATTCTAACTGGAAAGCATTGTGTGCATTCTGAATT
TGTTTGCTCATACTGTTATTGCCACGAAATTCATTCTATTTAACATGTGGATAACACTGTACTAGAAAGCATTCAGGATG
GGTCCCAGATATTCATTCTACTTTGACATGCATGAGACTTTTGTTTGTTTGAA----CATCCAT--AACACTTGCTTTTT
AATGCCTGACTTTTGATTGCCATGCTGTTTCAGGATTGTTGTCTGCCATGGGTGACTACACAATCCGGATAAGCACCAGC
TTGATCGACCAGCTCACACGCGATGACGAGA---AGGTGAAAAGGAGGACCAGGAAACCCAAGCCGAAGAAGGTCGTGGA
GCGACAAGAGGAGCCTCAGGACAATGGCCGGGAACTTCCAAGCGAGCCCAAGAGCAGCCCTGCCCCCGCTCCTGGGTGGG
CGCTGCCGCCCCCCATGTACCTACCAGTGACCCCTGCTCCTCCACCACCCCTGCCGGCAATCCAGGAAGTTGAAACCATA
CGCGACGTGGTGGCGGAGAGCGAGAATGTGCTGGAGAAGCTGCAGAAGCAGGAAGCGACGATGCGTGAGGAGCTTACCAG
GAGGGCCAAGGAGCTGCACGACAAGGAGTTCAAGCTGCTCTACCAGAACCCCTCGCCGTGCACCGACGAGAGGGCAGGCT
GCACCGATTGCTACCGGAGCAACACCCAGGATCCGCTCAAGTGCGCCGAGGCGGTCAAAAGGTTCGAGGCGTGCGTTCGC
ATGGCGAGTCGG---------A------------TGGGGGCTGCTC------------------AGT-------------
--------------GAGTCGGAGCGAGTGAGCGAGGTGTCGTACACACGATTTTGGTT-TGTCGGGAT-GATTGTATAAC
CTGAAAATCGGTTTGTCGGGATGATTGAATAATCTGAATGGATTTTC----G----GTGAGACCTGAAACATCATCAGGT
GTAGATTAGAATTCTGGTGAGGTACTGCACCGGTGCTGG----CAAGATGCCATGAGTGTCCTTGATGAATTTAGGGC-C
TGATTCCA--TGT-TTACTTACATACTAGAAAACGAAACATGAATTT-GCATGGTTTG-AATTAATGTTTCCCGATGAGT
ATATTTAGGTAAAATGGCTGCTTTTCCTTGCAACGCCCTGGCATGTTTACAT-AAATAACCGTGCTCG-TTTGTTAGGGA
TGAGTTTGAA-TAACCATTATAGGTTGATTTAG-----------------------------------------------
-------------------------------------------------------------CTTCAGA------TGCACC
TGTTGCTGCTGCTGCTTTTGCTGGTTATTGGCAAAATCCATGTCTGAGTGGTTCATAA----------------------
AGAAAATGTGGAACCTTAT--------------ATAGGTGTTATTTTATAGGCATAAATATTTC----------------
----------------------------------------TGTTGAGATACAACAACACTGGGGTACATGACAGGAATGT
TGTACACAACACACCCCCAGGGCCAGCAGGAAGCAGCAAACCAGATCAAGATCAGACCATCTCGGCCTAGGATGTTGATT
CAGAGATGCTCGACTCGACGCCCTACACCGCAGGCCC--------------CGACACTTCTCGACCAAGAGCAGAGCGAC
CGCGGCACATTTAAGTTGTAGAAGCAATAACAGCCATTCCACT------GGCAGAGCAACAATCAAGGACCAGGCCT---
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>chr1D_866
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------------------------------------------------------------------AATCATTCAGTATA
GGTCCCAGCAGTTCATTCTG-TTTAACATGCTTGAGACCTTTGTTTGCTTGAATTAACCTCCTTATAAATCTTGCTG-TT
AATCCCTGACTTTTGATTGTGATGCTGTTCCAGGATTCTTGTCTGCCATGGGTGACTACACAATCCGGATAAGCACCAGC
TTGATCGAGCAGCTCGCGCGCGATGACGAGAAGCAGATGAAGAGGAGGACCAGGAAACCCAAGCCGAGGAAGGTCGTGGA
GCAACCAGAGGAGCCTCAGGACAATGGCAGGGAACTTCCAACTGAACCCAAGAGCAGCCCTGCTCCTGTTTTGCCT----
--TTTCCGCCACCCATGTACCTGCCAGTGACCCCCGCTCCTCCACCGCCCCCGCCCGTGATCCAGGAGGTGGAAGCCATA
CGCGCCGTGGTTGTGGAGAGCGAGAAGGTGCTGGAGAAGCTGCAGAAGAAGGAGGCGACGATGCGCGAGGAGCTCACCAA
GAGGGCCAAGGAGCTGCACGACAAGGAGTTCAAGCTGCCCTACCAGAACCCCTCGCCGTGCACCGACGAGAGGGCAGGCT
GCGCTGAGTGCTACAGGAGCAACGTGCAGGACCCGCTCAAGTGCGCCGAGGCGGTCAAGAGGTTCGAGGCGTGCGTTCGC
ATGGCGATTCGG---------GGCGGTACCACCATGGGAGCTGCTC------------------AGTAGGCAGTGGCGCT
GGGAGTCGGGGCT-----------GAGTGAGCGAGGTGTCGAGCACACGATTTTGCTTCTGTCGGGAT-GAT--------
---------------------TGATTGAATAACCTGCCTGGATTTTTGTTTG----GTGAGACCTGAAACACCATCAGTT
GTAGATTAA--TTCTGGTAACGGGTTGCTACTGGTGTTGGCAACAAGAGGCCATGAGTGTCCTTGA---ATTTAGGGGAG
TGGCTCCATGCTACTTGCATACATATTACAAAATGAGACATGAAATTTGCAGGGTTCAAAATTAATGTCTACTGCATACA
TTGTGCTGTGAAATTTGCAGGGTTCCTTGGATTTTA---------------------------GCTCG-CTTGTTTGGGA
TGAGTTTGGA-TAACCATTGTATGTTGATTCTTCCGTGTCGCATAAGTACATTGCGCTGCAAAATGAAACATGAATCGCG
GGTGCGAATTAATGTGATTTAGCTTCAGCTGCGGCATGTTTTTTGTGGGATCAAAAAAAAAAAAT-----------CACC
TGATGCTGCTGCTGC-TTTGCTGGTTATTGGTGAAATCCATGTCTGAGTGGTTGATAA----------------------
A-AAATTATGGAACCTTGTATATGTTGTTAGGCATAAATGTTGGGATAAAAAAAT---CATCTTGGTCTACTACCCAGTC
TTTTGGTGGACAAAAGATTGTATTGTTCAAGC--------TATTCAGATACTACAACACTAGGCTACATGACAGGAATGT
TGTACA-----CACCCAAAGGGCCAGCAGGCAGCAGCAAACCAGATCAAGATCAGATGGTCTCGCCCTAGGGTGTTGATT
CAGAGATGCTCGACTCGACGCCAAGCAGTAGTCGCCCTACACCGCAGGCACCGATAGTTCTCGACCG-----AGAGCGAC
TGCGGCACAGTTCAGTTGTAGAAGCAATA---------------------------------------------------
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>chr1A_869
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---------------------------------------------------------------------CATTCAGTATA
GGGCCCAGCAATTCATTTTG-TTTATCGTGCTTGAGACCTTTGTTTGCTTGAATTAACCTTCTTA--AATCTTGCTG-TT
AATCCGTCACTTTTCCTCGTGATGCTGTTTCAGGATTCTTGTCTGCCATGGGTGACTACACAATCCGGATAAGCACCAGC
TTGATCGAGCAGCTCGCGCGCGATGACGAGAAGCAGGTGAAAAGGAGGACCAGGAAACCCAGGCCGAAGAAGGTGGTGGA
GCAACCAGAGGAGCCTCAGGACAATGGCAGGGAAGTTCCAACTGAACCCAAGAGCAGCCCTGCTCCTGTTTTGCCT----
--TTTCCGCCACCCATGTACCTACCAGTGACCCCTGCTCCTCCACCACCGTCTCCTGCAATCCAGGTGGTGGAAGCCATA
CGCGCCGTGGTGGCGGAGAGCGAGAAGGTGCTGGAGAAGCTGCAGAAGAAGGAGGCGGCGATGCGCGAGGAGCTTACCAA
GAGGGCCAAGGAGCTGCATGACAAGGAGTTCAAGCTGCCCTACCAGAACCCCTCGCCATGCACCGACGAGAGGGCGGGCT
GCGCCGAGTGCTACAGGAGCAACGTGCAGGACCCGCTCAAGTGCGCCGAGGCGGTCAAGAGGTTCGAGGCTTGCGTTCGC
ATGGCGAGGCGG---------GGCGGTGCCACCATGGGAGCTGCTC------------------AGTAGTA---------
----------GCT-----------GAGTGAGCGAGGTGTCGTACACACGATTTTGCTTCTGTCGGGATTGAT--------
---------------------TGATCGAATAACCTGAATGGATTTTT----G----GTGAGACCTGAAACACCATCAGTT
GTAGATTAA--TTCTGGTAACGGATTGCTACTGGTGTTGGCAACAAGAGGCCATGAGTGTCCTTGA---ATTTGGGGC-G
TGGCTCCATGTGT-TTACTTGCATACTACAAAATGAAACATGAATTT-GCAGGGTTCAAAATTAATGTTT----------
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>chr1A_869
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---------------------------------------------------------------------CATTCAGTATA
GGGCCCAGCAATTCATTTTG-TTTATCGTGCTTGAGACCTTTGTTTGCTTGAATTAACCTTCTTA--AATCTTGCTG-TT
AATCCGTCACTTTTCCTCGTGATGCTGTTTCAGGATTCTTGTCTGCCATGGGTGACTACACAATCCGGATAAGCACCAGC
TTGATCGAGCAGCTCGCGCGCGATGACGAGAAGCAGGTGAAAAGGAGGACCAGGAAACCCAGGCCGAAGAAGGTGGTGGA
GCAACCAGAGGAGCCTCAGGACAATGGCAGGGAAGTTCCAACTGAACCCAAGAGCAGCCCTGCTCCTGTTTTGCCT----
--TTTCCGCCACCCATGTACCTACCAGTGACCCCTGCTCCTCCACCACCGTCTCCTGCAATCCAGGTGGTGGAAGCCATA
CGCGCCGTGGTGGCGGAGAGCGAGAAGGTGCTGGAGAAGCTGCAGAAGAAGGAGGCGGCGATGCGCGAGGAGCTTACCAA
GAGGGCCAAGGAGCTGCATGACAAGGAGTTCAAGCTGCCCTACCAGAACCCCTCGCCATGCACCGACGAGAGGGCGGGCT
GCGCCGAGTGCTACAGGAGCAACGTGCAGGACCCGCTCAAGTGCGCCGAGGCGGTCAAGAGGTTCGAGGCTTGCGTTCGC
ATGGCGAGGCGG---------GGCGGTGCCACCATGGGAGCTGCTC------------------AGTAGTA---------
----------GCT-----------GAGTGAGCGAGGTGTCGTACACACGATTTTGCTTCTGTCGGGATTGAT--------
---------------------TGATCGAATAACCTGAATGGATTTTT----G----GTGAGACCTGAAACACCATCAGTT
GTAGATTAA--TTCTGGTAACGGATTGCTACTGGTGTTGGCAACAAGAGGCCATGAGTGTCCTTGA---ATTTGGGGC-G
TGGCTCCATGTGT-TTACTTGCATACTACAAAATGAAACATGAATTT-GCAGGGTTCAAAATTAATGTTTACTACATGCA
TTCTGCTGCAAAATTTGCGGGGTTCCTTGGATTTTA---------------------------GTCCG-TTTGTTTGGGA
TGAGTCTGAA-TAACCATTGTATGTTGATTCTTCCACGTCGCATACA---------------------------------
---------------------------------------TTTTTGCGGGATAAAAAAATCAC------------------
-----CTGCTGCTGC-TTTGCTGGTTATTGGTAAAATCCATGTCTGAGTGGTTGATAAAAAAATCCATGTCTGAGTGGAT
AAAAATTATTGAACCTTGT--------------ATAAATGTTGGGGTAAAAAAAAT-TCATCTTGTTATCATCATCCAAG
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------AGTTCTCGATGG-----AGAGCGAC
TGCGGCACAGTTGTCTTGTAGAAGCAATCACAGGCCATTCCCCTAGCAGAGCAGTGCAACAATCAGGGATCAGGCCTGTC
ATTGAATAGAAGCTGAATGACCTTCAGCTTCAGCTCCGGCAGGCCTGCCTCCGCTCACGGACTAGCCTCGGTATTTCCTT
CCATGTCTTCGGTTTCAATGGTTTGAATTCCGTTACTGCACATACCACAAGCGATGTCAGAAAAAAAAACTTGTACAAAC
TAATGTGTTATATCATAATGTATAGCATGATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAGGATTCTTGTCTGCCATGGGTGA
CTACACAATCCGGATAAGCACCAGCTTGATCGAGCAGCTCGCGCGCGATGACGAGAAGCAGGTGAAAAGGAGGACCAGGA
AACCCAGGCCGAAGAAGGTGGTGGAGCAACCAGAGGAGCCTCAGGACAATGGCAGGGAAGTTCCAACTGAACCCAAGAGC
AGCCCTGCTCCTGTTTTGCCTTTTCCGCCACCCATGTACCTACCAGTGACCCCTGCTCCTCCACCACCGTCTCCTGCAAT
CCAGGTGGTGGAAGCCATACGCGCCGTGGTGGCGGAGAGCGAGAAGGTGCTGGAGAAGCTGCAGAAGAAGGAGGCGGCGA
TGCGCGAGGAGCTTACCAAGAGGGCCAAGGAGCTGCATGACAAGGAGTTCAAGCTGCCCTACCAGAACCCCTCGCCATGC
ACCGACGAGAGGGCGGGCTGCGCCGAGTGCTACAGGAGCAACGTGCAGGACCCGCTCAAGTGCGCCGAGGCGGTCAAGAG
GTTCGAGGCTTGCGTTCGCATGGCGAGGCGGGGCGGTGCCACCATGGGAGCTGCTCAGTAGTAGCTGAGTGAGCGAGGTG
TCGTACACACGATTTTGCTTCTGTCGGGATTGATTGATCGAATAACCTGAATGGATTTTTGGTGAGACCTGAAACACCAT
CAGTTGTAGATTAATTCTGGTAACGGATTGCTACTGGTGTTGGCAACAAGAGGCCATGAGTGTCCTTGAATTTGGGGCGT
GGCTCCATGTGTTTACTTGCATACTACAAAATGAAACATGAATTTGCAGGGTTCAAAATTAATGTTT
>chr1B_869
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---------------------------------------------------------------------CATTCAATATA
GGGCCCAGCAATTCATTCTG-TTTAACATGCTTGGGAGCTTTGTTTGCTTGAATTAACCTCCTTA--AATCTTGCTG-TT
AATCCCTGACTTTTGATTGTGATGCTGTTTCAGGATTCTCGTCTGCCATGGGTGACTACACAATCCGGATAAGCACCAGC
TTGATCGAGCAGCTCGCGCGCGATGACGAGAAGCAGGTGAAAAGGAGGACCAGGAAACCCAAGCCGAAGAAGGTGGTGGA
GCAACCAGAGCAGCCTCAGGACAATGGCAGGGAACTTCCAAGTGAACCCAAGAGCAGCCCTGCTCCTGTTTTGCCT----
--TTTCCGCCACCCATGTACCTACCAGTGACCCCCGCTCCTCCACCACAGTCTCCTGCAATCCAGGAGGTGGAAGCCATA
CGCACCGTGGTGGCGGAGAGCGAGAAGGTGCTGGAAAAGCTGCAGAAGAAGGAGGCGACGATGCGCGAGGAGCTCACCAA
GAGGGCCAAGGAGCTGCATGACAAGGAGTTCAAGCTGCCCTACCAGAACCCCTCTCCGTGCACCGACGAGAGGGCCGGCT
GCGCCGAGTGCTACAGGAGCAACGTACAGGACCCGCTCAAGTGTGCCGAGGCGGTCAAGAGGTTCGAGGCGTGCGTTCGC
ATGGCGAGGCGG---------AGCGGTGGCGCCATGGGAGCTGCTC------------------AGTAGGCAGTAGCGCT
GGAGGAGGGGTTGCGAGTCGGAGCGAGTGAGCCAAGTGTCGACCACACGATTTTTCTTCTGTCGGGATTGAT--------
---------------------TGATCGAATAACCTGCCTGGATTTTT----GTTTGGTGAGACCTGAAAAACCATCAGCT
GTAGATTAA--TTCTGGT----------------------------GATGCCATGAGTTTCCTTGA---ATTTAGGGT-G
TGGCTCCATG----TTAATTGCATACTACAAAATGAAACATGAATT----------------------------------
--GTGCTGCAAAATTTGCAGGGTTCCTTGGATTTTA---------------------------GCCCG-TTTGTTTGGGA
TGAGTTTGAA-ACACAGTTGTATGTTCATTCTTCCGTGTCACATAAGTACATTGTGCTGCAAAATGAAACATGAATCGCG
GGTGCAAATTAATGTGATTTAGCTTCTGCTGCGGCATGTTTTTTGCGGGATCAATAAAAATCTCCTGATGATGCTGCTGC
TGCTGCTGCTGCTGC-TTTGCTGGTTATTGGTAAAATCCATGTCTGAGTGGTTGATAA----------------------
A-AAATTATGGAACCTTGTATATGTTGTTAGGCATAAACGTTGGGGTAAAAAAATA-TCATCTTGGTCCACTGCCCAGTC
TTTTGGTGGACAAAAGATTGTATGGTGCAAGAAGCTACAGTGTTCAGATACAACAAC-----------------------
-----------CACCCCAAGGGCCAGCAGGCAGCAGCAAACCAGATCAAGATGAGATGGTCTCAGCCTAGGATGTTGATT
CAGAGATGCTCGACTCGACGCCAAGCAGTAGTCGCCC--------------CGACAGTTGTCGACCA-----AGAGCGAC
TGCGGCACTGTTCAGTTGTAGAAGCAATCAGA---------CATAGCAGAGCAGAGCAAGAA------------------
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>chr1B_883
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---CCCAGCAATTCATTATG-TTTAACACGCTTGAGACCTTTGTTTGCTTGAATTAACCTCCTTATAAATCTTGCTG-TT
AATCCCTGACTTTTGATTGTGATGCTGTTTCAGGATTCTTGTTTGCCATGGGTGACTACACAATCCGGATAAGCACCAGC
TTGATCGAGCAGCTCGCGCGAGATGACGATAAGCAGGTGAAGAGGAGGACCAGGAAACCCAAGCCGAGGAAGGTCGTGGA
GCAACCAGAGGAGCCTCAGGACAATGGCAGGGAACTTCCAACTGAACCCAAGAGCAGCCCCGCTCCTGTTCTGCCT----
--TTTCCACCACCCATGTACCTACCAGTGACCCCCGCTCCCCCACCACCGTCTCCGGCGATCCAGGAGGTGGAAGCCATA
CGCACGGTGGTGGCGGAGAGCGAGAAGGTGCTGGAGAAGCTGCAGAAGAAGGAGGCGACGATGCGCGAGGAGCTCACCAA
GAGGGCCAAGGAGCTGCATGACAAGGAGTTCAAGCTGCCATACCAGAACCCTGCACCGTGCACCGACGAGAGGGCCGGGT
GCGCCGAGTGCTATAGGAGCAACGTGCAGGACCCGCTCAAGTGCGCCGAGGCGGTCAAGAGGTTCGAGGCGTGCGTTCGC
ATGGCGAGGCGG---------GGCGGTGCCGCCATGGGAGCTTAGCAATGGGAGAGGGGTTGCGAGTCGGA---------
----------GCT-----------GAGTGAGCGAGGTGTCGAGCACACGATTTTGCTTCTGTCGGGAT-GAT--------
---------------------TGATTGAATAATCTGCCTGGATTTTT----GTTTGGTGAGACCTGAAACACCATCAGCT
GTAGATTAA--TTCTGGT----------------------------GATGCCATGAGTTTCCTTGA---ATTTAGGGT-G
TGGCTCCATG----TTAATTGCATACTACAAAATGAAACATGAATT----------------------------------
--GTGCTGCAAAATTTGCATGGTTCCTTGGATTTTA---------------------------GCCCG-TTTGTTTGGGA
TGAGTTTTGAGTAACCATTGTATGCTGATTCTTCCGTGTCACATAAGTACATTGTGCTGCAAAATGAAACATGAATCGAT
GGTGAAAATTAATGTGATTTAGCTTCTGCTGCGGCATGTTTTTTGCGGGATCAATAAAAATCTCCTGA------TGCTGC
TGCTGCTGCTGCTGC-TTTGCTGGTTATTGGTAAAATCCATGTCTGACTGGTTGACAA----------------------
A-GAATTATGGAACTTTGTATATGTTGTTAGGCATAAATGTTGGGGTAAAAAAAATATCATCTTGGTGCACCGCCCAGTC
TTTTGGTGGACAAAAGATTGTATGGTGCAAGAAGCTACAGTATTCAGATACAACAAC-----------------------
-----------CACCCCAAGGGCCAGCAGGCAGCAGCAAACCAGATCAAGATGAGATGGTCTCAGCCTAGGATGTTGATT
CAGAGATGCTCGACTCGACGCCAAGCAGTAGTCGCCC--------------CGACAGTTGTCGACCA-----AGAGCGAC
TGCGGCACAGTTCAGTTGTAGAAGCAATCAGA---------CATAGCAGAGCAGAGCAA---------------------
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>chr1A_890
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----------ATTCACTCTG-CTTGACATGCTTGGGACCTTTGTTTACTTGAATTGACCTCCTT--AAATCTTGCTG-TT
AATCCCTGACTTTTGCTTGTGATGCTGCTTCAGGATTCTTGTCTGCCATGGGTGACTACACAATCCGGATAAGCACCAGC
TTGATCGAGCAGCTCGCGCGCGATGACGAGAAGCAGGTGAAAAGGAGGACCAGGAAACCCAGGCCGAAGAAGGTGGTGGA
GCAACCAGAGGAGCCTCAGGACAATGGCAGGGAAGTTCCAACTGAACCCAAGAGCAGCCCTGCTCCTGTTTTGCCT----
--TTTCCGCCACCCATGTACCTACCAGTGACCCCTGCTCCTCCACCACCGTCTCCTGCAATCCAGGTGGTGGAAGCCATA
CGCGCCGTGGTGGCGGAGAGCGAGAAGGTGCTGGAGAAGCTGCAGAAGAAGGAGGCGGCGATGCGCGAGGAGCTTACCAA
GAGGGCCAAGGAGCTGCATGACAAGGAGTTCAAGCTGCCCTACCAGAACCCCTCGCCATGCACCGACGAGAGGGCGGGCT
GCGCCGAGTGCTACAGGAGCAACGTGCAGGACCCGCTCAAGTGCGCCGAGGCGGTCAAGAGGTTCGAGGCTTGCGTTCGC
ATGGCGAGGCGG---------GGCGGTGCCACCATGGGAGCTGCTC------------------AGTAGTA---------
----------GCT-----------GAGTGAGCGAGGTGTCGTACACACGATTTTGCTTCTGTCGGGATTGAT--------
---------------------TGATCGAATAACCTGAATGGATTTTT----G----GTGAGACCTGAAACACCATCAGTT
GTAGATTAA--TTCTGGTAACGGATTGCTACTGGTGTTGGCAACAAGAGGCCATGAGTGTCCTTGA---ATTTGGGGC-G
TGGCTCCATGC----TACTTGCATACTACAAAATGAAACATGAATTT-GCAGGGTTCAAAATTAATGTTT----------
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>SNPs
S---------------------S------------S----S-----------------S-----S-----------S---
--------------------------SSSSSSSSSSSSSS----S----------S----SSSSSSSSS-----------
-----------S--S-----------------------------S-------------SS-----S--------------
----------------S----------S---------------------------S------------------------
------------------------------------------S--------SSS---------------------S----
-------------S----------------------SS--------S----------------------------S----
--------------------------------S----------------S--------------------------SSSS
S-------------------------------------S-----------------------------S-----------
---------------S-SS-----------------S-----------------------------S-----SSSS----
------------------------------S---------S----------------------------S----------
-----------------------S--S------------------------------------------------S----
-S--------------------------------------------S---------------------------------
---------S-----------S----------------------------------------------------------
--------------SS----------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
-S--------------------------------------------------------------S---------------
---------------------S-----------------------------------------S----------------
----------S----S---------------------------------------------S--------S-----SS--
------------SSSSSSSSS-----------------------------------------------------------
------------------------S----------------------S--------------------------------
-------------------------------S------------------------------------------------
----------------SS--------------------------------------------------------------
---------------------------------------------------------------------------S----
---------------------------------S-S-S-----------SS-S-------S-------S-----------
--------------------------------------------------------------------------------
------------------------------------------------------------------S------------S
-------------------------------------------------S------------------------------
---------S----------------------------------------------------------------------
-------------------------------------------------S------------------------------
-------------------------------------------------------------S-------------S----
---------S---------S--------------------------------------------------S---------
-----------------------------------------------------------------------------S--
--SS--S-S--S-SSS-SS---SSSSSSSSSSSS-S-S-S-SSSS-S-SSSSS-SSSSSSSSSSSSSSSSSSSSSSSS-S
S-SSSS-SSSSS----------------------------------------S-SSSSS------SS-S----S----SS
---SSS-SS-SSSSS-SS-SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>forward_476
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TCTGAAACAAGCGGGTTCCA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_2857
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TCTGTCAGCTGCCAACAGAG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
