>input_sequence_76286
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---------------------------------------------------------------------ATGGC------
------GCAGCCTCTCACTCGCCGCCGTCTCCTCCTTCCTCCGCCTCTGCTTCTGCTGATGCTCCTCCTCGCTCTCGCCG
CCCACCATCAGG------------CCGCTTCCGACCCACCGGTAATTAAGCAAACCACACACACAATCAAACACGCATGC
AGATGT-----------TTTTTACCCTCAGATCATCACATCTCAACCCTTTTTCTGCTGCAGGCGA------------CC
CACGGCGGCATGCGAGCCAGCGGCACCAGGTCCCTGCTCCAGCAGCAGCCGCCTCCTCCCAGGCTAGGTACGCTCTAACC
AACACACGTCTTCG---------------GCGCAACGTAACATGTACTCATGTGGC-CGGCTGTTCCTCTTGCCTCGCCG
GATCT-------------GGCTTGCAGACTGCCCCAAGGTGTGCGCGGGCCGGTGCGCCAACAACTGGAGGAAGGAGATG
TGCAACGACAAGTGCAACGTCTGCTGCCAGCGCTGCAACTGCGTGCCCCCCGGCACCGGCCAGGACACCCGCCACATCTG
CCCCTGCTACGCCACCATGACCAACCCGCACAACGGCAAGCTCAAGTGCCCCTAG-------------------------
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>chr7B_1_TraesCS7B01G484400
ACGCGGTGACGGAGCTGAACGAGAAGGACTTCTGGCGCATGTTCGACGCGTCGCACTACGAGCACTGCCGGCAGAAATAC
GGCGCCGTGGGCACCTTCATGAGCGTCTACTACAAGTCCAAGAAGGGGCGCAAGTCGGAGAAGGAGGTGCAGGAGGCCGA
GGCCGCCATCCTCGAGCCCGCCTACGCCGACGAGGCCTAGGGTCGTCGTGTTCGTCGTCGTCGGCCGTCCGTGTCTCGAC
GGTTTCGGTTCCTTCAGTCGTCGGAACT---------CTGGATTAATTGGTTCCCTTTTGCTTGGTTGCTT----AATTA
TTAATAAGTAGAACTTGATCGA----TCGTGTAGCGTTGATTGGTAGCAGCCTGCGGCCTGTAGCAGCATGAGTCATTGT
TGTCGCCCGTGAGTACTTGATTCAACCGCCCCTTTATGTTGATGGGATT-AATTGCTTAGAACTTAAAATGAGGCAGATG
CGTATGTGGGAATAATATTGCGATTTGTGTTGAAAGTGGGATGAAGTGGATGATAGC-----------------------
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----------------TGATTCAGGGATGAAAATTCAAGATAAAAACGGGCGGTGAGTGATGATGATGCACTAGTGTGGT
TGCCTCTGTGCGTGTGGGACCGACCAAAAGTGACCGTCCATTCCAT-------CCTTGTGCGCTGCTGGGTGGTAATAAT
ACTGTGTGATGGTCACGG--------------------------------------------------------------
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---------------------------GAGGGGCATGATGCGTGCAGTCTAACAATGTCTAAC-----------------
--------------------------------------------AATAAAAATAAAAAGAGAGGG-------ATGGACGG
CTGTGAGTGAGTGCCGACGCCGACGCTGGCTGGTCCGTGGTGTAGTAATCAAT--------------AGGCATGGTCGCC
GTGGTAGCTCTGTCAGACTGTCTGCCACCACCACGCTGCGCACTGCTGCCGGCG--------------------------
------TTATTACATAAGCGACAACCCGGCCTCGTGGATCCATCTCTCTCGGGTCTAGCTAAAAACCCTCGCAAAC--CA
AGCCCCTGCCACTTGCAACGCACACTTACACCGCTTGCAGAGCTCCAGCTCGACCTCTAGCTAGCATCCATGGC------
------GCAGCCTCTCACTCGCCGCCGTCTCCTCCTTCCTCCGCCTCTGCTTCTGCTGATGCTCCTCCTCGCTCTCGCCG
CCCACCATCAGG------------CCGCTTCCGACCCACCGGTAATTAAGCAAACCACACACACAATCAAACACGCATGC
AGATGT-----------TTTTTACCCTCAGATCATCACATCTCAACCCTTTTTCTGCTGCAGGCGA------------CC
CACGGCGGCATGCGAGCCAGCGGCACCAGGTCCCTGCTCCAGCAGCAGCCGCCTCCTCCCAGGCTAGGTACGCTCTAACC
AACACACGTCTTCG---------------GCGCAACGTAACATGTACTCATGTGGC-CGGCTGTTCCTCTTGCCTCGCCG
GATCT-------------GGCTTGCAGACTGCCCCAAGGTGTGCGCGGGCCGGTGCGCCAACAACTGGAGGAAGGAGATG
TGCAACGACAAGTGCAACGTCTGCTGCCAGCGCTGCAACTGCGTGCCCCCCGGCACCGGCCAGGACACCCGCCACATCTG
CCCCTGCTACGCCACCATGACCAACCCGCACAACGGCAAGCTCAAGTGCCCCTAGGCAT---CACATCATCTTCAGAGGC
ATATGCTCCGCCTCATGCGTCTCCCCTGCCATGTTCTACTAGCTAGCTCTAGTACTCTAGCATGTACTATTTGATGTGAT
CTTCAGCTAC----------------------------------------------------------------------
---------------------------------------------------------------ATTCCATAAGCTCACAG
TGTCACACTCACACATGT--AGTGTTGAGTTGCATTGCAG------------------CCTCCTCATTCTCACTCAACCA
TGATGATGACGATTTCCTGATAATTAATTTCCTGCATACTTGTTGATCACATCTATATTATGTCATGCGGCTACAGAGTT
AGATACAGGGCTGGGCTGAGTTGAGCGAGTTACAGGCATATACATATATATGTACACACGTCACACGAGTAATCAATCTA
ATTAGATTAAAAAGGGGGTTTTGCACCTATGACATGAACCCCAACTACAGTAGTAAGCAGTGAGCAGCTAGACATTCATG
GTCTGGTTTCACTTTCAATTGAGCAGCACCTCCACATGACATGTACCTCTATCTCAAATATACACAAGGTGGCAACACAG
GCAGACGGCGCGCAAG----------------------------------------------------------------
-------AAGCCTCGAGCCGTCTGTCTACCGTTGCTGCCGGGACAGGAAGAACTCGTAGTCGGGGTGCCTGTTTCTGCGC
TTCTGGTCCTCCTTCCACACGTCGGCCCTGGCCATGGCCGCCGCGGCTTGGTTCAGCGTCGACAACCTTTCTTGGAGAAC
CTGAGATGGTTCACTTGACGAGGAATCGGCGTCTTCTGAACCGGATCTGCTCGTCTGGAACCACCACTCCCCCTGCGACA
CACGATGCAAAGAGTCGTCACATGAACAAAACAAGCG-------------------AAATAAGCGAGCAAGCACACTAGC
CACTCTGTTTGCTTCGACAACGAG--------------------------------------------------------
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--------------------------------------------------------------------CCAGCATGGCTT
CCAACGTCTGGGGTCTTAACACCAACTTTAAACAATCTTCGGTTAACATGTATGTATGTGTGTATGTGTCGGGAGAAAAG
CAGCTGTTTTACCTTGTCGTTGTAAGATTGCAAACCCATCACTGGCAAAACAGCATGGCTATGCC
>chr7D_1
ACGCGGTGACGGAGCTGAACGAGAAGGACTTCTGGCGCATGTTCGACGCGTCGCACTACGAGCACTGCCGGCACAAGTAC
GGCGCCGTGGGCACCTTCATGAGCGTCTACTACAAGAGCAAGAAGGGGCGCAAGTCCGAGAAGGAGGTGCAGGAGGCCGA
GGCCGCCATCCTGGAGCCCGCCTACGCCGACGAGGCCTAGTCGTGTTGTCTCGCTGCT----------------------
GGTTTCGGT--CTTGAGTCGGCGGAACTCCTCCGATCCTGGATTAATTGGTTCCCTTTTGCTTGGTTGCTT----A-TTA
TTAATAAGTAGAACTTGATGGA----TCGTGTAGCGTTGATTCGT-----------------------------------
------------------------ACCCCCCCTTTATGTTGATGGGATTTAATTGCTTACAACTTAAAATCAGGCAGATG
TGTATGTGGGAATAATATTGTGCTTTGTGCTTTGTGCTTTGTGCTTTGTGGCGTGTGTCCGTGCCCGGGTTCTGTGCACC
AAGCTGAGAACCTGAGTGCTGCTGGGATGTGCTCCTGCTAGTGAGTAGGCAATGGGGCTGTGCTCATGAGACGGGTGTGT
TTGTGGCTTGTGCGTTGGTTTCAGTTGAGTGCCAACAAGTTTGCAGTGACACCGAGCTTGCAGGATATGGAAGGTGAAGT
AGTGATTCGGAGATGAAAGTTGAAAGAAAAATAACGGCTCTGTGGGTGAGCAGTAATGTGCTTGTGCTTGATTGCCGGGT
GAGTCAAGTGAAGAATTTATTCTGGGATAGAAATTCAAAGATAAAACTAGCATTGTGC---------------------T
TGCCTCTGCCTGTGTGGGACCGACCAAAAGTGACCGTCCATCCTTTGTACGTACCTTGTGTGCTGCGGCTGCATGTGAGG
GAGGGACATGCGATGCACATCAGCACATGCATGTGAGAGAGAGAGAGACAACCTCGATCGTCCCCACTCGCACAGTGTGC
ACATGCATTGAGTAGGTGAGTACGTGAAGGATGAGACAAGCTCGCTGGAGCGTAATACAAAAAGAAGTAGCCTCACTTGA
ATTAGAATCGCTCAAATACGTACGGTGCGTGTACATGTGAGCACGTAACATCATCTACCAACGGTCCTGGCCACGGTGAG
GCGCTCTCTCTCTCTCTCTCTCTCTCTGCCGCTGCCATGTGTCCAGTGCCTTTTTTGCGAAGCGGCCCCTCGTATTCTCC
GTTATCCCAATTCCCACCCCGTACACTGCGGTGCATCATGCAGGCAGCAAAGCAAAGCAAAACTGTGTGTGTAGCGCGCA
CAGTGCC----TTGCTTCGTTTTTCATGCTTGCTTGTTTATAAAAAAAATAGTAAAAGGAAAGAGAGTGAAAATGGACGG
TTGTGAGTGAGTGAGTG-GCCGACGCTGGCTGGGCTGGGTGGTCAGTGCTGTAATCAAGAAGCACAGAGGCATGGTCACC
GTGGTAGCTAG------CTAGCTACCTACACTGCACCTTGCTCTGCTTCCTCTGTCGGCTGTCTGCGCTGCACTGGTATC
ACTGCATTATTACATAAGCGACAACT---CCTCCTGGATCTCTCTCTCTCTCTCTCTCGCCTATAGGTAGAACCCTTGCA
AACCCCTCCCACTTGCCACTTGCA---------------------------GAGCTCAAGCCAGCATCCATGGCGCCGAC
CCAGCAGCGGCTTCTCACTCGTCGCCGTCTCCTTCCTCCTCTG---------CTGCTGTTGCTCCTCCTCGCCGCACATC
TTCAGCCTGCTGCTGCTTCCTCTTCTGCTTCTGATCCGCTGGTAAGCAAACTG--------CACAATCAAACACGCATGC
AAATGCAATGCACACCCTTTTTGCCCTCGGATCTCAACATT-------TTTTCCTGCTGCAGGTGACCACCACGACGGCC
CACGGCAGCATGAGGGCCAGCAG---CAGGTCCCTGCTCCAGCAGCAGCCGCCTCC---CAGACTAGGTACGCTCTACCA
AACATCTTGGGCTCAACTCAAATCTCTGTGCTCAACGTAGCATAACATGCGCTGACGCGGTTGGTTTTCTTGCCTTGCCT
TCGCCGGCGGCGACGGCGGGCTTGCAGACTGCCCCAAGGTGTGCTTGGGCCGCTGCGCCAACAACTGGAAGAACGAGATG
TGCAACGACAAGTGCAACGTCTGCTGCCAGCGCTGCAACTGCGTGCCCCCCGGCACCGGCCAGGACACCCGCCACATCTG
CCCCTGCTACGACCAAATGACCAACCCGCACAACGGCAAGCTCAAGTGCCCTTGATCTAGAGCACATCATCTTCAGATGT
GTCTTCTGTCATGCATGTTCT-----------------------------------------------------------
-------------------ACTGTTCCCACCCTCAGGGAGTAATGGCCTGTGATCTTAT------CAAAGCATAAATAAG
AAGAGAGAGTTTCTATCTGTTGGTTCCCTGCCTGCCTTGTTGCTGGCCAGATCCAGTTATAGTATTCCATAAGCTAAGAT
---CAGAGTTGCACACAGGCAGTGTTGGGTGATATA------------------------TTCTCATGCTCCCTGAATGG
TGATGATAATG---------------ATTTCCTGCATGGTTGTTAATCAGATCTATATTATAATATGCAGCTAAACAGTT
AGATACAGGGCTGGGCTGAGTT----GAGTTACAGGCATATA--------TGT----ACATCACATGGGTGAGCAAGCTA
ATTAGATTTAAAAGGGG---TTGCACCTATGATATCAACCCCACCTAGTA-ACCAACATC--------------TC--TG
GTCTGGTTTCACTTTCAATTGAGCAGCACCTCCACATG-----TGCCTCTATCTCAAATATATACAGGGTGGTAACACAG
GCAGACGGCGCCGCTCAGCCGGCATGGTTGGTTCTGGTTACAGGGGAACAAGCATCCGTCAGCGTTCTCAAACATGGTTC
GCGC-AAAAGCCTCGAGTC----ATCTACCGTTGCTGCCGGGACAGGAAGAACTCGTAGTCCGGGTGCCTGTTTCGGCGA
GCCTGGTCCTTCTTCCACACATCCGCCCTCGCCATCGCCGCCGCAGTTTGGTTCAGCGTCGACAACCTTTCTTCAAGAAC
CTGAGACGGCTGACTTGACGAGGACTCTGCATCTTCTGAACCGGATCTGCTCGTCTGAAACCACCACTCCCCCTGCAACG
CAAGATGCAAAGACTGGTCACATGAGCAAAAACACCAATGAGGCATCCCCTCTTC-------------------------
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-------------------------------------------------------AGCCAAATGAAGGGCTAACAAGTAG
GAAGCATCAAACAACTTAGGAGTTTGTTCAGAGATATTCATGTCACCGTCTGCAATTTTACCTCAGAACCAACATGGCTT
TCAACGTCTGGGGTCTTAACACAAAC-TTAAACAATCTTCGGTTAACATGTATGTATGTGTCA--------GCAGAAAAG
CAGCCATTTTACCTTGTCATTGTAAGATTGCAAACCCATGACTGGCAAAACAGCATG--------
>chr7A_1
ACGCGGTGACGGAGCTGAACGAGAAGGACTTCTGGCGCATGTTCGACGCGTCGCACTACGAGCACTGCCGGCACAAGTAC
GGCGCCGTGGGCACCTTCATGAGCGTCTACTACAAGAGCAAGAAGGGGCGCAAGTCGGAGAAGGAGGTGCAGGAGGCCGA
GGCCGCCATCCTCGAGCCCGCCTACGCCGACGAGGCCTAGGCCGTCAGTTCGT---------------------------
--------------------TCGGAACT---------CTGGATGAATTAATTCGCTTTTGCTTTGCTTGGTTATGA-TTA
TTAATAAGTAGAACTTGATGGACGGGTCGTGTAGCGTTGCAACTTTGGTGAGGTTCGTGAC-------------------
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-------------------------------------------------------------ACTTTGTGTGTAGCAGTGT
CATTGTTGGATTTGCCCCGTTTTTAATCTGTGGAATTGGTTGTTAGAA--------------------------------
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------------------------------------------------CTTGAGCTCGAGCTAGCACCCATGTT------
------GCAACTGTATGTGATCT---------------------------------------------------------
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-TCTTCTGTCATGCATCTTCTTTCCACTAGTACGTGCTGT---------------------------------ATGTGAT
CTTCACACAGCGCTCTGCCACTGTTCCCACTCTCAGGGAACAATGCTCTGTGATCTTATCATAGTCATAGCATAAATAAA
AGA-------------------------TGCCTGCCTTGTTGCTGGCCAGATCTAGTTACAGTATCCCATAAGCTAAGAG
TTACAGTGTTACACACAGCCAGTGTTGGGTTGCATTGCAGTTGCAGACATGAGTGATCCCTTCTCATTCTCAATGAATGA
CGATGGTTTCCTGC----------TAATTTCCTGCATTGTTGGTGATCAGATCTATATTATG-----CAGCTACAGAGTT
AGATAGATACAGT-GCTGAGTT----GAGTTACAGGCATATA--------TGTACACACATCACATGGGTGAGCAAGCTA
ATTAGATTTAAAAAGGG---TTGCACCTATGATATCAACCCCAACTAGTA-AGTAAGCAGCGAGCTAAACATTTTC--TG
GTCTGGTTTCACTTTCAATTGAGCAGCACCTCCACATG-----TACCTCTATCTCAAATATATACAGGG--GTAACACAG
GCGGACGGCGCCGCTCAGTCCGCATGGTT----CTGGTTACAGGGAAAGTGGCCCCCGTCCGTGTTCTGAAACATGGTGT
GTGCAAAAAGCTTGGGGTC----GTCTACCGTTGCTGTCGGGACAGGAAGAACTCATAGTCCGGGTGCCTGTTCCTGTGG
GCCTGGTCCTTCTTCCACACGTCCGCCCTGGCCATGGCCGCCGCGGCTTGGTTCAGCGTCGACAACCTTTCTTCAAGAAC
CTGAGATGGTTCACTTGACGAGGACTCTGAGTCTTCCGAACCGGATCTGCTCGTCTGAAACCACCACTCCCCCTGCAATG
CAGGATGCAAAGAATGGTCGCATGAGCAAAACATGTATTTGCCGTTTCGAAAGCAAAAATAAGCCAGCAAGCACACTAGC
CACTCTGTTTGTTTACACGACCATATTCGACTGAAACCATACATACACTTGACCACATACTAGACACACTGCAAATTAAC
TTGGGACCAAAACAAGCCTTTGCCACAGCTCAACGTTTCATTCGCGACAGAACTTTTCTGGCCATGACTTGGAACGAAAC
TACAAGACATTAAATTGGGATCTGTTGATGATAGGACCAACGAGGATCCCTCTTTAGCCAAATGAAGGGCTGACAAATAA
GAAGCATCAAACAATTTCAGAGTTTGTTCAGCAATATCCATGTCACCGTCTGCAATTTTGCATCAGAACTAACATGTCTT
TCAATGCCTGGGGTCTTAAAACCAAC-TTAAACAATCTTCGGTTAACCTGTATGTACATGTCA--------GGAGAAAAG
CAGCCATATTACCTTGTCGTTGTAAGATTGCAAACCCATGACTGGCAAAACAGCAT---------
>SNPs
-------------------------------------------------------------------------S--S---
------------------------------------SS------------------------------------------
-----------------------------------------SSS--S--S-SSS-SS-SSSSSSSSSSSSSSSSSSSSSS
---------SS---S-------------------------------------------------------------S---
-------------------S----------------------S--S-SS-SSSSSS-SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS---S-------------------------------S----------S---------
S-------------------S-S------S-SSSS-SSSSS--SSS--SSSSS-SSS-----------------------
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-----------------S----S-----SS--------SSSS-----SS--SS--S-SSSSSSSSSSSSSSSSSSSSSS-
--------SSS------------------------------S-SS---------------S-----S-SSSSS-SSS-SS
SSS-SSSSSSS-SSS-SS--------------------------------------------------------------
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----------------------------S--S----S----SS----SSS-S---S-SSS--------------------
----------------------------------------------S--S-S-----S--S--S----------------
S------------SSSSS---------------S-S-S-SS--SSSSSSSSSS------------------------S--
---------SSSSSSSS--SS--S--SS---SS-S-SSS--S-----S--SSS---------------------------
-------------------------SSSS----S------SS--------SSSSSSSSSSSS-S-SSSSSSSSSSS----
-S-----S--------S--SSS--SSSSSSSSSSSSSSSSSSSSSSSS--S--S---S----------------------
-----------S---------------------S-S-----S-SSSSSSSSS------S-------------SSSSSSSS
SS--S-S-SSS--------------S-----S--S--S-S-----SS--S-SSSSSSSSSS-------------------
-S---S----------------S-----S----SSS----SSSSSSSS----S----------S----------------
------S-----S-S------S-SSS------------------------------SSS---S--------------S-S
----SSSSSSSSSS-----------------S-------S---SSSS-SSSS--S-----S--S-SS--------S---S
SSS-S---------------------------------------SS------S----------------S---S------
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-----------S-SSS-----------------------------------S-SSS-SS------------------S-S
S-S-S--SSSSSS----SSSS-S--SSSSSSSSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
-----SSS-S----------------------------------------------------------------------
---------------------------------------------------------------------------S-S--
-SS--S-S-S-----SSS---------S---------------------------------S------------S--SS-
-------S---SSSSSSSSSSSSS-------------SS----------S------------SS----S-----------
----------------------SSSS----------------SSSSSSSS---------S-----S-S--S-S---S---
--------S--------SSS------------S--S-----------SSSS---------S----SSSSSSSSS-SSS--
--------------------------------------SSSSS-------------------S---S-----S-------
-----------SSSSS----------------------------------------------------------------
-----------------S-SSSS--------------------------------------S-----------------S
SS--------S------------S-------------------------------------------------SS-----
------------------------S--S-----------------------------S------------------S--S
--S----------S-S---------S----------S---------------------------S---------------
-----------S--SS--S--S-S--------------------------------------------------------
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-----------------------------------------------------------------------S--------
S-------------------------S----------------------------------SSSSSSSSSS---------
----SS---------------------------------S-----------------SSSSSSSS
>forward_1721
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---------------------ACACTTACACCGCTTGCAGA---------------------------------------
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>reverse_3829
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--------------------------------------------------------------------TCGGGAGAAAAG
CAGCTGTT---------------------------------------------------------
