>input_sequence_76250
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---------------------CTATAAATATAGATCATGGATGTACGCATACACAGATCAGTTTTAGTTAGGACG-----
----AAAATCACACACTACCCGATCGATCGCTATGGCATGGTGCATGAAGAACATCGGCAAAGGACAGTTGGGAGGCAAC
AAGGTGTTGATATGCTTGTGGGCCTTGTG---------GCTGGTGACGCTGCTTGTCTTGTCATCTGGTACGAATACTTT
GGACGCGCACTTCTCCCGATCATAATGATCCAAAGTTAATTTAG-TTTTTGTTTCTGC----------------------
-------------------G------------TTTAGTTGATTGTTAATTTGTATATCGTTTTCGGACGTATGCAGAAAA
GATGGGATCAGATGCCTGTGATAGACAAATTAGCCAGACATGGCCCA---ACACAACATGTATCATTCGCGGCACCTGCA
ACAAGTACTGCAGAAGGGAGAACTTTGACCGCGGCATCTGCAAAGAACTCAATTATTGCTTCTGCTACAGGAACTGCGCC
ATCGAATCCATCTA-----------GCCATATAC-TATGTGTCATTTTCATGAATGCTCGATCGAAGCTATTGCTATGAG
TTCATGCATTATGAATGAA-------------------------------------------------------------
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>chr2A_1_TraesCS2A01G024000
ATAGACCTCGTATACTCAAAACAAGGTTGTGCATTTGGTAAAAAGGTTTGTGAATTTGAAAATGTTCATTAAGTGAAAA-
AAATCAGATATTGCAAAAAATGTTCAAACATTCAAAAATGTTCAAAAATTTGATAACAATTCATGAATTTGAATCACGGA
TTTCAAGAAGTACGTGAAAAATAATAACCACAAATTTAAAAACTTCATGATTTGAAAAATGTTCATCAATATTAAAAAGA
TTCCTGAT-T-------TTTTTTGGTTTTCCCCCGG-TTTTTCGTAATTGTTGGACAAAAAAGTTTAGAAAAAAAAGTTG
CGTGAAAAAATGCTTTTTTTCTTCTGCAAAAGGCATATATTTACTCTTCGTGCAGGCCTGGATTTGCTTCAGCGAGAGGC
ACAGTCATGCCTCTCAGAAAAGGGAA-------TTTTTTTCCTTTCATGAAAGGCATAGATTTACCTCTCGTGTAGGCAC
AGATTTGTTTTCACGAGAGGCACTTTTGATCATAAGAATAGGGTATGCCATGCGTCCATATATGCCAACTATAATTTAGA
CCCTTTGAAGCCTTCAGTTATCATGAAAGTTTTGTGAGACGATTTCAAAATTTATATACTGAAGAAAAATAAATGTTTAA
AAGCAATCTATATCTATAGGTAAAAGGAGAAAAAATTATGCACATATAATAGTAAACCAACAAATTACCTAGGTCTACAG
ATAAACACCGACATGAGCTA-TTTTAGCTCTTCATTAAACCA--------------------------------------
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---------------------------------------TATCTAGCATTGTCACTAAAATTAGATGTTAGGATAAGGCA
TCACCATGTTGAAAAGTAGAAGTAAATCAAGACGTTACGATAAGAATTAATGGCATGCATTAATATCTTAAACCATATCT
AGCATTGGCACTAAAGTTACATGTTAGGATAAGGCATCACCATGCTGAAA------------------------------
--------------------------------------------------------------------------------
------CGTGCAAGCAAATTAAGACGTTTGGATAAGG------ATGACATGCATTAATATC----TTAAAAAGAACAGTG
TCGCCATTAAGCAAACCTTTTCTATAAATATAGATCATGGATGTACGCATACACAGATCAGTTTTAGTTAGGACG-----
----AAAATCACACACTACCCGATCGATCGCTATGGCATGGTGCATGAAGAACATCGGCAAAGGACAGTTGGGAGGCAAC
AAGGTGTTGATATGCTTGTGGGCCTTGTG---------GCTGGTGACGCTGCTTGTCTTGTCATCTGGTACGAATACTTT
GGACGCGCACTTCTCCCGATCATAATGATCCAAAGTTAATTTAG-TTTTTGTTTCTGC----------------------
-------------------G------------TTTAGTTGATTGTTAATTTGTATATCGTTTTCGGACGTATGCAGAAAA
GATGGGATCAGATGCCTGTGATAGACAAATTAGCCAGACATGGCCCA---ACACAACATGTATCATTCGCGGCACCTGCA
ACAAGTACTGCAGAAGGGAGAACTTTGACCGCGGCATCTGCAAAGAACTCAATTATTGCTTCTGCTACAGGAACTGCGCC
ATCGAATCCATCTA-----------GCCATATAC-TATGTGTCATTTTCATGAATGCTCGATCGAAGCTATTGCTATGAG
TTCATGCATTATGAATGAAATAAATTAACTTTTTTAAGCCGCTCTGTCCATCTATCCGTGCCATANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGTGCCAGAGAACACAACACTCATACAATCATTAGGTCAGGGAAGGAAGACATGGAGCCATGACTCGATGTGGATTCT
ACGGTCTGCAAGCAGCTTGCAATGCCACAACACAGCGTCGTCTCTGCAACAGGCAAGCACCCGATCCACCGACGGCTGTT
GGCGTTGAAAGACGACTGAATTTTGATGCTTCCAAAGTTGC---------------------------------------
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--CAGCAGACGACAAAGCCCCCTTGGGCACACGCGCGCGGTTTAGCTGTCGCACGTCCGGACCAGCCCTGCTCGGCGAGG
CCTCCATCGGAGCCAGCATTGCGTGGAGCTCCCGATGACCGACTCTCGTCAGCCGGGGGGCCAGGAAACTGGCAATCCCG
CACTGACGCACCTGCCAGACAGTGGCTTCCTCGTCCGTCGTGTGAGAGAGGAGAGCGGGAAAGGTGGCGGCCACCACGCC
GCTGGGGAGCCAGCAGTCCCACCAGAACGAGCACGACCGCCCGTCTCCCACCTCCACCGAGGAGATAGAGCAATAGAGGG
GGACCAGCCTCGCCATGGAGTTCTTGTGTTCTTCCAGAGCGATCTCGCCCTGCGACAGGAGCGAGCAACTGAAAGTGCAA
CTATCCCTAGGTGGTTTTGGTAATTCCTAACAACATATAGCTCATTGAGCTAATGCTATTTCAAGATTAATATCTCAGGA
AAGCTCAATGATTGGCATGGCATGGATGAGAAAAGTGGACCCCTCAAAATATTAAGGACAAAGGATTGGCTCAAGCTCAA
AGCCCAAGATTCTATATTTT
>chr2A_1
ATAGACCTCGTATACTCAAAACAAGGTTGTGAATTTGGAAAAAAAGTTCGTGAATTTGAAAATGTTCATTAAGTGAAAA-
AAATCAGATACTGCATAAAATGTTCACACATTTAAAAATGTTCAAAAATTTGATAACAATTCATGAATTTGAATCACGGA
TTTCAAGAAGTTCGTGAAAATTAATAATCACGAATATAAAAAGTTCATGATCTGAAAAATGTTCATGAACATTAAAAAGA
TTCCTGAT-TTTTTTTGTTTTTTGGTTTTCCCCCGG-TTTTTCGTAAGTGTTGGACAAAAAAGTTTAGAAAAAAAAGTTA
CATGAAAAAAATGCTTTTTTCTTCCGCAAAAGGCACATATTTACTCTTCGTGCATGCCTGGATTTGCTTCAGCGAGAGGC
ATTGTCATGCCTCTCAGAAAAGGGAAAAACA--TTTTTTTTCTTTCGTGAAAGGCACAGATTTACCTCTCGTGTAGGCAC
AGATTTGCTTTCAGGAGAGGAACTTTTGATCATAAGAATAGGGTATGCCGTGCGTCCATATATGCCAAC--TAATTTAGA
CCCTTTGAAGCCTTTAGT--------------------------------------------------------------
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>chr2D_1
ATAGACCTCGTATACTCAAAACAAGGTCGTGAATTTGGGAAAAAGGTTTGTGAATTTGAAAATGTTCATTAAGTGAAAAA
AAATCAGATACTGCA------------------AAAAATGTTCAAAAATTTGATAACAATTCATGAATTTCAATGACGGA
TTTCAAGAAGTTCATGAAAAATAATAATCACGAATTTAATAAGTTCATCATTTGAAAAATGTTCATGAATATTAAAAAGA
TTCCTGATATTTTTTTGTTTTTTGGTTTTCCCCCGTTTTTTTCGTAAGTGTTGGACAAAAAAGTTTAGAAAAAT--GTTA
CCTGAAAAAATGTTTTTTTTCTTCTGCAAAAGGCGCATATTTACTCTTCGTGCAGATCTGGATTTGCTTCAGCGAGAGGC
ACAGCCGTGCCTCTCAGAAAAGGGAAAACAATCTTTTTTTTCTTTCATGAAAGGCACCGATTTACCTCTCGTGTAGGCAC
AGATTTGCTTTCACGAGAGGCACTTTTGATCATAAGAATAGGGTATGCCATGCGTCCATATATGCCAAC--TAATTTAGA
CCCTTTGCAGCCTTTAGTTATCATGAAAGTTTTGTGAGACGATTTCTAAATTTATATGCTGAAGAAAAATAAATGTTTAA
AAGTAATCTATATCTATAGGTAAAAGGAGAAAAAATTATGCACATATAATAATAAACCAACAAATTACCTAGGTCTACAG
ATAAACACCGACATGAGCTATTTTTAGCTCTTCATTAAACCA--------------------------------------
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---------------------------------------TATCTAGCATTGGCACTAAAATTAGATGTTAGGATAAGACA
TCACAATGTTGAAC------------------------------------------------------------------
--------------------------------------------------AGTGGAAGTAAATCAAGACGTTTGGATAAG
AATTGATGACCTGCATTAATATCTTAGACCATATCTAGCATTGGCACTAAAATTAGTTGTTAGGATAAGGCATCGCCATG
CTCAAAAGTGGAAGTAAATCAAGACGTTTGGTTAAGAAAATTAATGACATGCATTAATTTCTTA---CAAAGTAATAGTG
TCAGCATTAAGCAAACTTTTTCTATAAATATAGATCATGGATGTACGCATACACGGATCAGTTTCAGTTAGGACGCATA-
------------------------------------CACGGTGCATGAAGAACATCGGCAAAGGACTGTTGGGAGGCAAC
AAGGTGTTGATATGCTTGTGGGCCTTGTG---------GCTGGTGACGCTGCTTGTCTTGTCATCTGGTACGAATACTTC
GGATCCGTACTTCTCCCGATCAGAATGATCCAA-GTTAATTTAGTTTTTG-TTTTTGC----------------------
-------------------GAGTAGAATGATCAGGA---------------G--TATTGTTTTCGAACGTATGCAGAAAA
GATGGGATCGGATGCCTGTGATAGACAAGTTAGCAAGACATGGCCCA---ACACAACATGTATCGTTCGCGGCACCTGCA
ACAAGTACTGCAGAAGGGAGAACTTTGACCGCGGCATCTGCAAAGAACTAAATTATTGCTTCTGCTACAGGAACTGCACC
ACTGAATCCATCTA-----------GCCATATATATATGTGCCATTTTCATGAATGCTCGATGGAAGCTATTGCTATGAG
TTTATGCATTATGAATTAAATAAATTAATTAATTTAAGCCGCTCTGTCCATCTATCCATGGCATA---------------
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>chr2A_556
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------------TTTAGTTATCATGAAAATTTTGTGAGACAATTTCTAGATTTATATACTGAAGAAAAATAAATGTTTAA
AAGCAATCTATT------GGTAAAAGGAGAAAAAATTATGCACATATAATAATAAACCAACAAATTACCTAGGTCTACAG
ATAAACACCGACATGAGCTA------------------------------------------------------------
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-----------------------------------------TTTTAGCTCTTCA--------------------------
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-------------------------------------------------------------------TTAAACCATATCT
AGCATTGTCACTAAAATTAGATGTTAGGATAAGGCATCACCATGTTGAAAAGTAGAAGTAAATCAAGACGTTACGATAAG
AATTAATGGCATGCATTAATATCTTAAACCATATCTAGCATTGGCACTAAAGTTACATGTTAGGATAAGGCATCACCATG
CTGAAACGTGCAAGCAAATTAAGACGTTTGGATAAGG------ATGACATGCATTAATATC----TTAAAAAGAACAGTG
TCGCCATTAAGCAAACCTTTTCTATAAATATAGATCATGGATGTACGCATACACAGATCAGTTTTAGTTAGGACG-----
----AAAATCACACACTACCCGATCGATCGCTATGGCATGGTGCATGAAGAACATCGGCAAAGGACAGTTGGGAGGCAAC
AAGGTGTTGATATGCTTGTGGGCCTTGTG---------GCTGGTGACGCTGCTTGTCTTGTCATCTGGTACGAATACTTT
GGACGCGCACTTCTCCCGATCATAATGATCCAAAGTTAATTTAG-TTTTTGTTTCTGC----------------------
-------------------G------------TTTAGTTGATTGTTAATTTGTATATCGTTTTCGGACGTATGCAGAAAA
GATGGGATCAGATGCCTGTGATAGACAAATTAGCCAGACATGGCCCA---ACACAACATGTATCATTCGCGGCACCTGCA
ACAAGTACTGCAGAAGGGAGAACTTTGACCGCGGCATCTGCAAAGAACTCAATTATTGCTTCTGCTACAGGAACTGCGCC
ATCGAATCCATCTA-----------GCCATATAC-TATGTGTCATTTTCATGAATGCTCGATCGAAGCTATTGCTATGAG
TTCATGCATTATGAATGAAATAAATTAACTTTTTTAAGCCGCTCTGTCCATCTATCCGTGCCATANNNNNNNNNNATATT
GATCGCAGAAACGGGCAAAGCCCCCAGTTTGCTACAGAGAGAGGTTTTTGGGCGACTCCGTAGA----------------
--------------------------------------------------------------------------------
---GTGCCAGAGAACACAACACTCATACAATCATTAGGTCAGGGAAGGAAGACATGGAGCCATGACTCGATGTGGATTCT
ACGGTCTGCAAGCAGCTTGCAATGCCACAACACAGCGTCGTCTCTGCAACAGGCAAGCACCCGATCCACCGACGGCTGTT
GGCGTTGAAAGACGACCGAATTTTGATGCTTCCAAAGTTGC---------------------------------------
--------------------------------------------------------------------------------
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--CAGCAGACGACAAAGCCCCCTTGGGCGCACGCGCGCGGTTTAGCTGTCGCACGTCCGGACCAGCCCTGCTCGGCGAGG
CCTCCATCGGAGCCAGCATTGCGTGGAGCTCCCGATGACCGACTCTCGTCAGCCGGGGGGCCAGGAAACTGGCAATCCCG
CACTGACGCACCTGCCAGACAGTGGCTTCCTCGTCCGTCGTGTGAGAGAGGAGAGCGGGAAAGGTGGCGGCCACCACGCC
GCTGGGGAGCCAGCAGTCCCACCAGAACGAGCACGACCGCCCGTCTCCCACCTCCACCGAGGAGATAGAGCAATAGAGGG
GGACCAGCCTCGCCATGGAGTTCTTGTGTTCTCCCAGAGCGATCTCGCCCTGCGACAGGAGCGAGCAACTGAAAGTGCAA
CTATCCCTAGGTGGTTTTGGTAATTCCTAACAACATATAGCTCATTGAGCTAATGCTATTTCAAGATTAATATCTCAGGA
AAGCTCAATGATTGGCATGGCATGGATGAGAAAAGTGGACCCCTCAAAATATTAAGGACAAAGGATTGGCTCAAGCTCAA
AGCCCAAGATTCTATATTTT
>chr2D_673
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-------------------------------------------------TAATAAACCAACAAATTACTTAGGTCTACAG
ATAAACACCAACATA-----------------------------------------------------------------
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-----------------------------------AGCTATTTTTAGCTCTTCA--------------------------
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-------------------------------------------------------------------TCAAACCATATGT
AGCATTGGCACTATAATTAGATGTTAGGATAAGGCATCACCATGTTCAAAAGTGAAAGTAAATCAAGATGTTTGGATAAG
AATTAATGACATTCATTAAC------------------------------------------------------------
---------------------------------------------------------TATCTTAC-------TAACAGTG
TCACCATTAAGCAAACTTTTTCTATAAATATAGATCATGGATATACGCATACACGGATCAGTTTTACTTAGGAGG-----
----AAAATCACACCCTACCCAATCGATCGCTATGGCACGGTGCATGAAGAACATCGGGAAAGGACTGTGGGCAGCCACC
AAAGTGTTGATATG---------CATGTG---------CCTGGTGACGCTGCTTGTCGTGTCATCTGGTACGAATACTTT
AGACCCGCACTTCTCCCGATCAGAATGATCCAA-GTTAACTTAA-TTTTTGTTTTTGC----------------------
-------------------GAGTAGAAGTTAATCTAGTTGATTGTTTATTTG--TATTGTTTTTGGACGTATGCAGAACA
GATGAAATCGGATGCCTGTGATAAAGATTGGAGCCTGACATGGGACA---ACAGCTCATGTATCCTTCGCGGCACCTGCA
ACAAGCCCTGCAGAAGGGAGAACTTTGAGCGCGGCATCTGCAAAAAACTCTTTCATTGCATGTGCTACAGACACTGCAAC
ACTGAATCCATCTA-----------GCCATATA----TGTGCCATTTTCTTGCATGCTCGATCGAAGCTATTGCTATCAG
TTCATGCATTATGAATGAAATAAATTAATTAATTTAAGCCGCTCTGTC--------------------------------
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>chrUn_737
TGAAAAGTGGAAGTAAATCAAGACGTTTCGATAAGAACTAATGGCATGCATTAATATCTTAAAAAGTAACAGTGTCACCA
TTAAGCAAACTTTTTCTATAAATGTAGATCATGGATGTACGCATACACACATCAGTTTTACTTATCAGTTATCACTACCC
CATTGATCGCTATGGCATGGTGCATGAAGAACATCGGCGAAGGACTGTTGGGAGGAACCAAGGTGTTGATATGCTTGTGC
CTCGTGACGCTGCTTGTCTTGTCATCTGGTACGAATACTTCGGACCCGCGCTTCTCCCGATCAGAATGATCCAAGTTAAT
TTAGTTTTTTTTTGCAAGTAGAAGTTGATTTGGTTGATTGTTAATGTGTATTGTTTTCGGACGTATGCAGAAGAAATGGG
ATCGGATGCCTGTGAAAAAGCTTGGAGCCAGACATGGGACAACGACACATCATGTATCTTCCGCGGCACTTGCAACAAGC
CTTGTAGAAGAGAGAACTTTGACAGCGGCATATGCAAAGAAATAAATTATTGCATGTGCTACAGGAACTGCACCACTAAA
TCCATCTAGCCATATGTGTGCCATTTTCATGGATGCTCGATGGAAGCTATTGCTATGAGTTCATGCGTTATGAATGTAAT
AAATTAATTAATTTAAGCAGCTCTGTCCATCTATGATCTATCCATGGCATAATAAAGGAATAGATCTTGATGGGGCAATG
TTCATTTGCTACAATATTTTCCCCACTGTTTCGAATGCTCACTGGGTGAGAGGTTCTCCATTCAAATTGGCCGAAATGTC
AATAGGTTTACAGCATAGGCAGTAGCGGAGCCATCGTTTTGCCTAAGGGCATCTCCAACGCCGACTCTCAAACAATTCTC
AATTTTTCGGGCCGCGTGGTATGGATATGTTTTCCTATCCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGCCACATCAGCTTCTGACTAACCCGAACCACCCAAAAATGCCAACCCGCCTCTCCCGCATTTTCCATCAAACGC
CCTTGCCGCATGCCGCGCCGGATTCATGCCGCCCAAAGCATGCAGCGGCCGGCATGATCCTGCGCAATCTGACCGGACGG
GAGGGCGGCGCCAACAGACAACCTCTCGGGCGTCACCGCATCACGGCGGACGTCGTGTCCCGAGAAACCGACTCTCTCCG
CTGCACCGCTTTGAAGTGGGCTGACCACACCTTCGCCTGGCCTAGCCACGGCTATTTAAGCTGCATGCCGGCGACGCACA
CATCCGCACTCCTCCTCCTCGAGCATCATCCCCTCCCCCTCCCCGATCCCTTCCTCTTCCCAAAGCCCTGCGGTGATGCT
GAACTCATGGTTCTCTGCGCCGGCAGGTGGAGGCAGTGGAAATTCCTCGTCAAGCGGATCTTGGGGCCGCCGCCCTTGCT
CTGTGGAGGCAGTGGAAATTCCTCGTCAAGCGGATCTTGGGGCCGCCGCCCTTGCTCTCCAGACCCTTCGGCATCCACGA
CAGCGGGCTCCTCCGGCAAGGAGGAGATAGTCATCTCCTACGACGATTAGGAGCACCAGCAGCCGCAGCACCTGCACCGT
CTCTTCGTGGAAGTTGCTCTGACGGACGAATAATTCATCCGTCAGATGAAAATCATAACATAGCACTCGCTCCGTTAGAT
GGGCCCGGTGCCACCATCGTTAGCGCACGCCAAGTAGGAGCCACTGTCCCCGATGCACGTCCGCGTGAAGCGGGAGCCGG
CATCCCCACTCCGACGGCTGAAGGATGTACCTGCATCCCGACCGCACAACCGCGGCCTCCATTTCGGAGGCCGCATCAAG
GGAGAGCCCGCGTCCCCCCAGCGCATCCGTGGCGTCAAGCACGATCCGGTGTCGCCCTCACCGCACAGTACGTACGCCCG
TATTGACGGGATCGCATCGCTGCCTTGCCGCAACTATCGCCCCGTGAAGGAGTAGCTACCGCGTGCGATCACAAAGGCAC
GTGGTTGCATCCTCCACTACCTCAGAGGAGGCGGTTCCGGCGGCGCCTCGGGCTCGGGGGCTGTCGTATCCGAGAAGGAA
CGTGCGGCGATGCAGCAAGCGTGGTATGACTGGTGCAATGTTGTTGGCCGCTCTGCGTTCGCCAAGTCCGACACTGCGTT
GGAATGGGTCCACAACGACCTGGACCTAGCCGTCGTGTGGGCCCTCTACCGCTCCATCACCACAACGAGACGGCAACTCA
CCGCCGTCGCCTTCACGGCGACTTGGCCAAGATCGGTGAGGAGTCGTCGCTTAGTGACTCCTTCGCCAATCCCGGCAAGG
GCAAGCCCACCGTCGGCTCTAGCCACGGCAACCCTCTACACAGGCAGGAGGAGGCGAAGTGGCCGGTAGAGCTTGGGAAG
TAGGTGGACCGCTCCGAGCTGGGGCTCCGCCATTGAGCTATTTTTAGCTCTTCATTGAACCATAGTACTCCATCCGTCTA
GGTGTGTAAGTCATCTTACGTTGTGCACTGCGACCAAGGCGGAGAGGAAAACAAGAAAACTTATTGTCTTTTTGCTAATT
AATAGCATTGCATGCAATGAACTAACCATTGCATGTCATATTTATTAGTCTCAAGTCATTGAAAGCATGCACGGCCCACG
TCTCTTATTGGTTGATATGTCACAACACAAGAAACGGAGAGGGAGTTAATGTACCGTGCCTAACTGTTTTAGGATTATTT
GGTTTTCGTAAGGTGACTTACACACCTAGACAGAGGGAGTACCTAGCATTGGCATTA-------ATGTTAGGATAAGGCA
TCAGCATGTTGAAAAGCGGAAGTAAATCAACACGTTTCGATAAGAACTGATGACATGCATTAATACCTTAGACCATATCT
AGCATTGGCACTAAAATTAGATGTTAGGATAAGGCATAACCATGTTCAAAAGTG--------------------------
--------------------------------------------------------------------------------
----------GAAGTTAATCAAGACGTATGGATAAGAA--CTAATGCACTGCATTAATATCTTATTAAAAAATAACAGTT
CCATCATTAAGCAAACTTTTTCTATAAATATAGATCATGGATGTACGCATACACATATCAGCTTTACTTAGGAGG-----
----AAAATCACAACGTACCCCATCGATCGCTATGGCATGGTGCACGAAGAACATCGGCAAAGGACTGTTGGCAGCCACC
AAGGTGTTGATATG---------CTTGTG---------CCTGGTGACGATGCTTGTCTTGTCATCTGGTACAACTACTTT
GGACCCGCACTTCTCCCGATCAGAATGATCCAA-GTTTATTTAGTTTTTGTTTTTTGC----------------------
-------------------GAGTAGAAGTTAATTTAGTTGATTGTTAATTTG--TATTGTTTTCGGACGTATGTAGAAGA
GATGAAATCGGATGCCTGTGATAAAGATTGGAGCCTGACATGGGACA---ACAGTTCATGTATCCTTCGCGGCACCTGCA
ACAAGCCCTGCAGAAGGGAGAACTTTGAGCGCGGCATCTGCAAAAAACTCTTTCATTGCATGTGCTACAGACACTGCAAC
ACTGAATCTATCTA-----------GCCATATA----TGTGCCATTTTCTTGCATGCTCGATCAAAGCTATTGCTATGAG
TTCATGCATTATGAATGAAATAAGTTAATTAATTTTAGCCGCTCTGCCCATCTATCC-----------------------
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>chr2B_824
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--------------------------------------GATAAGAAATGATGACACACATTAATATCTTAGACCATATCT
AGCATTGACACTGAAATTAGATGTTAGGATATGTCATCACCATGTTGAAAAGTG--------------------------
--------------------------------------------------------------------------------
----------CAAGTAAATTAAGACGTTTGGATAAGG------ATGACATGCATTAATATCTTTATTAAAAATAACAGTG
TCACAATTAAGCAAACTTTTTCTATAAATATAGATCATGGATGTCCGCATACACATATCAGTTTCACACTTTTACTTTGG
AGAAAAAATCACACACTGCCCGATCGATCGCTATGGCATGGTGCATGAGGAACATCGGCAAAGGACAGTTGGGAGGCAAC
AAGGTGTTGATATT---------CTTGTGGGCCTTGTGGCTGGTGACGCTGCTTGTCTTGTCATCTGGTACGAATACTTC
GGACCCGTGCTTCTCCCGATCAGAATGATCCAA-GTTAATTTAGTTCTTG-TTTTCGC----------------------
-------------------GAGTAGAAGTTAATTTAGTTTATTGTTAATTTG--TATTGTTTTCGGACGAATGCAGAAAA
GATGGGATCGGATGCCTGTGATAGACAAATGAGCAAGACATGGCCCA---ACACAACATGTATCGTTCGCGGCACCTGCA
ACAAGTACTGCAGAAGGGAGAACTTTGAGCGCGGCATCTGCAAAGAACTCAATTATTGCTTCTGCTACAGGAACTGCACC
ACTGAATCCATCTA-----------GCCATATA----TGTGCCATTTTAATGAATGCTCGATGGAAGCTATTGCTATGAA
TTCATGCATTATGAATGAAATAAATTAATTAATTTAAGCAGCTCTGTCCATCTAT-------------------------
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>chr2B_853
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-------------------------------------------------------------------TTAAACCATTCCT
AGCATTGGCACTAAAATTAGATTTTAGGATAAGGCATAACCATCTTCAAAAGTG--------------------------
--------------------------------------------------------------------------------
----------GACGTAAATCAAGACGTTTGGATAAGAA--TTAATGACATGCATTAATATCTAG---AAAA-TAACAGTG
TCATCATTAATCAAACTTTTTCTATAAATATAGATCATGGATGTACGCATACACAGAGCAATTTTACTTAGGAGG-----
----AAAGTCACGCCCTGCCCCATCGATCGCTATGGCACGGTGCATGAAGAACATCGGCAAAGGACTATTTGCAGCCACC
AAGGTGTTGATATG------------------CTTGTGCCTGGTGACGCTGCTTGTCATGTCATCTGGTTCTGGTAAGCT
ATCTTAAGAAAAA--------ATATTGATCCAA-GTTAATTTAGTTTTTG-TTTTTGC----------------------
-------------------GAGTAGAAGTTAATTTAGTTGGTTGTTAATTT------------CGGACGTATG-AGAAGA
GATGGGATCGGAAACCTGTGATAAAGATTGGAGCCTGACATGGGACA---ACAGCTCATGTATCCTTCACGGCACCTGCA
ACAAGCCCTGCAGAAGAGAGAACTTTGAGCGCGGCATCTGCAAAAAACTCTTTCATTGCATGTGCTACAGACACTGCAAC
ATTGAATCCATCTAGCCATATATATGCCGT---------------TTTCATGCATGCTCGATCGAAGCTATTGCTATGAG
TTCATGCATTTTGAATGAAAAAAATTTATGAATTTAAGCCGCTCTGTCCATCTATCC-----------------------
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>chr2D_911
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---------------------------------------------TGAAAAGTG--------------------------
--------------------------------------------------------------------------------
----------GAAGTAAATCAAGACGTTTCGATAAGAA--CTAATGGCATGCATTAATATCTTA---AAAAGTAACAGTG
TCACCATTAAGCAAACTTTTTCTATAAATATAGATCACGGATGTACGCATACACATATCAGTTTTACTTAT---------
-------------CACTACCCCAT-GATCGCTATGGCATGGTGCATGAAGAACATCGGCGAAGGACTGTTGGGAGCCAGC
AAGGTGTTGATATG------------------CTTGT-----------------------TCCTCTGGTACGAATACTTC
GGACCCGCACTTCTCCCGATCAGAATGATCCAA-GTTAATTTAGTTTTTT-TTTCTGCAAGTACTCCCTCCGTAAACGCT
TTATATTTCTTTATAGAGGGAGTAGAAGTTAATTTGGTTGATTGTTAATGTG--TATTGTTTTCGGACGTATGCAGAAGA
GATGGGATCGGATGCCTGTGAAAAAGCTTGGAGCCAGACATGGGACAACGACACATCATGTATCTTCCGCGGCACCTGCA
GCAAGCCCTGTAGAAGAGAGAACTTTGACAGCGGCATATGCAAAGAAATAAATTATTGCATGTGCTACAGGAACTGCACC
ACTGAATCCATCTA-----------GCCAT---------------TTTCATGCATGCTCGATGGAAGCTATTGCTATGAA
TTCATGCATTATGAATGAAATAAATTAATTAATTTAAGCCGCTCTGTCCATCTATCCATGGCATA---------------
--------------------------------------------------------------------------------
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>chr3D_1826
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-----------------------------------------------------ATGTAGCCATGAGTCGATGTGGATTCT
ACGGTCTGCAGGCAGCTTGCAACGCCACAGCACAGCGTCGTCTCTGCAACAGGCAAGCACCCGATCCACCGACGGCTGTT
GGCGTTGAAAGACGACCGAATTTCGATGCTTCCAAAGTTGCCAGCAGCACAGCATGGAGAACTCCAGTTGCGAGCTCACC
ACCTGGGCCGCACGCACCGCAAGCGCGCCCAGGTCACACGCAGTGGCACCGGCCGTACCCACACCCACCCTGCGCCAGAA
TGCTTCCGCGAATGGGCATCCAAAGAGCATGTGATCGGCGGACTCAAGAGCGGCCGGGCAAAGCGGGCAGCCGGCCTCAT
CCGCCGCGACGATGGACTTTCTGAGAAGCGTGTCGCGTGTGTGTATACGCTTCTGAACCAGGAGCCAGCAGAAGAACTTC
ACCCTGGGGGGAACGCGCGCGCCCCAGATCATGTCGGCGTAGCCGGCGCGCACGCCCCCGAAGCGCAGGAGCCCGTACAC
AGCAGCAGACGACAGAGCCCCCTTGGGCGCATGCGCGCGGTTTAGCTGTCGCACGTCCGGACCAGCCCCGCCCGGCGAGG
CCTCCATCAGAGCCAGCACCGCGTGGAGCTCCCGATGACCGACTCTCGTCAGCCGGCGAGGCC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>SNPs
-------------------------------S------------------------------------------------
---------------S----------S-----S-----------------------------------------------
---------------------------S---S----------S-----------------------S-------------
-----------------------------------------------S-------------------------------S
-S----------S----------------------S--------------------------------------------
----------------------------------------S---------------------------------------
-------S-------------------------------------------------------------SS---------
--------------S-------------------------------S---------------------------------
---------------------------------------------------S----------------------------
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---------------------------------------------------S----------------------------
----------------SS------------S-----S---------S-S---S---------------------------
---------------S---S------------------------S-----------------------------------
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---------------------------------------------------------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
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----------------------------S---------------------------------------------------
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--------------------------------S-----------------------------------------------
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--------------------
>forward_488
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------------------------------------------------------------------TCTCGTGTAGGCAC
AGATTTGT------------------------------------------------------------------------
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>reverse_4497
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----------------TGAATTTTGATGCTTCCAAAGTTGC---------------------------------------
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--------------------
