>input_sequence_76207
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------ATGAAGATCGGGAAGGCTTCTGAGCTCGTGAAGAAGGCAGCAGCGATGTGCAAGAGCAAGACCGGCGTGCTCGC
CGCCAGGCTCCTCATCCCCGCCTCGCTCCAGCGCCGCAGGATGGCCACGGCACCAGTGGTCTCTCACAAGATCGACGCGC
TCATTATGGCCGACTGGGAGAGAGTTGACTGCCACAAGGATCTCACTCTCCGCACGGCCGAGAAGAGACTGGTCGTCGTC
CATGAGGATGATTTGGCGGCCAATTTCTCTCATCACTTGGCGGTGTTCAACCAAGAGAATGGTCATGGTGGCTGCCATAC
TGACAGGACACTACATCCCCTCTTCAACGACGACCACAAGAACTGTCGTTACGCTTACAATGGTGATGTGCCACTTTATT
CATGTGATCAAGACGATGATGATGAGCCTTCAGTCATGGATGTGATCAGGAATAACCGAGAAGTTGAGGGGCTGGAGTTC
AATATGGAGGAGGAGATTGATCAGGCCGCCGATATGTTCATTAGGAGGTTCCGGCAGCGGTTGA-ACGAGGGATTTTAG-
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>chr5A_1_TraesCS5A01G294500
ACCCAAGAAGGCTTCGTGCGCCGCTTTATAAACAAAGCAACCCCCGGATAAAAGCAACACCCAACCGAAAATGGAGGTCT
ACAGAATACAATAGAGATTCACAGCTAACGAAAAACGAAAAAACAAATAAGTATACGACGCATGTTGGGGGAACAGCAAA
CACGCCCGCCAAGCTCTATATATGCATGCATGTTTGAAGAAAAGAAACCGAGGCTACGTACGTGCCGTGCGCTCACTCTC
A-------------------------------------------------------------------------------
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---------------------------------------------------------CGGCAAGCACGTGCCGTGTGAA-
-ACTGAGACTGCGTAATTCCAAGTCCCAAGTCTTCATCTCCATAATGGTATTGTGACTTTTGACTTAATGAAGAAA----
----------AAACTCCCATCGATCTATCACGGAGATT-GCT----TCTAC-TTTGTACT-----ACGAGCGAGTAGCAA
AGCACACGG----AGGAGAAGGAAAGC-TAATT-AAGCAGATCCCACGTATAGCCTCACGCCCACACAAAGCAGCGGAGA
ACAGAAGGGA-AAAACAGAGACGCGCTA--TAGCTGCAACCTTTGGAATTCTGAGCATGAACCACACGGCCGTAAA-CCG
GCAAGGAAAGCTGCCCGGTCTGCTTGCTTTGGGCAAAACTATTC-----TAAGCCATCAATCAGCTAGCTTTACCACCTG
ATTAAAGGAGAGATATTGGCAGTCTGGGAC----------------------------------AGATGCCTTTTGTGAC
TTAAT-GGAATATATATTTTCCCATTG--------------TCCACTGTCAACATCCTTTTAGTGCTCACTCCACATGTC
AATTTTTC-CTCT----------CTAATGCTAGCTGCTTTCACATGCTTTATTAGGCGAGGTACCAAAAATTTGATCGGG
ACATGAGCAA-GGCTAGTTGC---AATGTTAATTGCATGCTCAGCTTCCGACTATAAATACACC---ATTGGAGCCTCGG
GACAAAGCCCATGCCTCATTTCAAGCAAGCTTCTCTCATCTCTGTATCCCAGTAACCTAACCCATT-CCAA-------GC
CCGAGGCACCACACCTT-----CTTACGCGT---------T---------AAGCAGCTCGACCA----CCTC---AAAC-
--AAAGATGAAGATCGGGAAGGCTTCTGAGCTCGTGAAGAAGGCAGCAGCGATGTGCAAGAGCAAGACCGGCGTGCTCGC
CGCCAGGCTCCTCATCCCCGCCTCGCTCCAGCGCCGCAGGATGGCCACGGCACCAGTGGTCTCTCACAAGATCGACGCGC
TCATTATGGCCGACTGGGAGAGAGTTGACTGCCACAAGGATCTCACTCTCCGCACGGCCGAGAAGAGACTGGTCGTCGTC
CATGAGGATGATTTGGCGGCCAATTTCTCTCATCACTTGGCGGTGTTCAACCAAGAGAATGGTCATGGTGGCTGCCATAC
TGACAGGACACTACATCCCCTCTTCAACGACGACCACAAGAACTGTCGTTACGCTTACAATGGTGATGTGCCACTTTATT
CATGTGATCAAGACGATGATGATGAGCCTTCAGTCATGGATGTGATCAGGAATAACCGAGAAGTTGAGGGGCTGGAGTTC
AATATGGAGGAGGAGATTGATCAGGCCGCCGATATGTTCATTAGGAGGTTCCGGCAGCGGTTGA-ACGAGGGATTTTAGG
GTCTTGTTTGCACATGCATG----TACCTCGGTCTAGCGAGTTGTCTTCTTTTTAGGTGCCCACAAATTAGAAAATTTTG
TAGAAATCAATATGAACAGGTAGGAGTTGAGGCTTGACAAACAATGATCCTCTTTATCATTTATTATTTTAATAATTTTG
TCAACATCCAAGATACCTCGGCCTCGCCTACCACTCCCCAGCT-CCCTCTCCCATTACGCCCAACCACCCCGCGCCTTAG
AAAACCCACGGTACATATGCATCACTTCTACAAATGGGGGCACTTCCATTGCCCCCTTGTGTTTTCTTTAATTCTCTTCG
GCCTTCTTTGGTTTGGAGAAATTTCATAGAAATTTTTGTGTTTTCTTTCTCTTCAGCCTCCTTTGGTTTGGAGGAATTTC
ATAGGAATTTTAGATGATAGGATTTTTATATGATTTTTTCCTTTAGAGCCCTTTGGTTCATAGGAATAGATTTTTATTCC
TATTTAGGATTGGTTCCTATCCTTCACATTTCATAGGAAAATAAAAATGAGTCTAGACTCAATGAAAAAATTCCTTTGGT
GTCAACCAAATGACATCTCGTTTCCTATTCTTATTCATAGGATTTGAGATACATGTCATCTCATTTCTTACAAAATTCCT
ATTTCTATAATAATCCTATCCTATGAACCAAAAAAGGCCTTCAAGTCCCTAAAGATTTTACCAAAAAAATTCACAATTTA
CATAAGTTGCATCTTCTAAGTATGCCGCTGCCATGGCGACTAGTATCTCTAACTCTCAAATAAGAGAGCTAGCCTACTCC
CCCGCACGATCCAGAGGA-TGCTGCTCCGGCTACTGCTGCTTCCTTTCCTCGGGAATATACAAATGTAAATTTCAGGCGA
CTTGCATTAGAGCATCTTCAACGGGTGCACAAAAATATCGTGCCCTAAAATAATTTTATCGTGTCACTATAATATTTTTA
GTACGCCGGACCCAACGTTGCTTTAACAAATGCCAAAAAACACGC
>chr5B_235
TCCACTGTCAACATTCTTATAGTGCTCACTCCACATGTCAATATTTTTTTCCAATATATGCTTTATCACGCGAGGTACCA
AAAGTTTGATGGTGACATGAACAATGCTAGTTGCAATGTTAATTGCATGCTCAGCTCCCGACTATAAATACACCATTGGA
GCGTCAGGACAAAGCCCATGCCTCATTTCAAGCCAGCTTCTCTCATCTTTGTATCCCAGTGACCTACCCTACCCTGTTCC
AAGCCTTAGGCACCACAGCTTCCTAATTATTTCCCTTCTTAAGCAGCCCGGCAACCTCTCAGAGAAAAAGATGAAGATCG
GGAAGGCTCCTGAGCTCCCGAAGAAGGCGGCAGCGATGTGCAAGAGCAAGACCACCAGGCTCCTCATCCTCGCCTCGCTC
CAGCGCCGTAGGATGGCCACGGCCGCCGTGGTCTCTCGCAAGATTGACGCGCTCATAATGGCTGACTGGGAGAGAGCGGA
CCGCCACAAGGCACTCGCGTTGGGAATGGTCGAGAAGAAACCGGTCATCAACCATGAGAGTGACTTGGAGGCCAACTTTT
CTCGTCACTTGGTGATGTTCGGTCAAGAGAATGGTCATGGTCGCTGCCACACTGACCGAATGCATTCCTTCTTCAACAAC
GACCAAGAGAACTTCCATTACACTGACGATGATGATGTGGAACTTGATTCATGTGATCAAGACGATGATGATGAGCCATC
AGTCATGGATGTAATCAAGAACAACCGAGAAGTTGAGGGGTTGGAGTTCAACATGGAGGAGGAGATTGATCAGGCTGCTG
ATATGTTCATTAGGAGATTCCGGCAGCGGCTGAACGAGGGATTTTAGGGTCTTGGTTGCACATGCATGTACCTCAGCCTA
GGGAATTGTCTTCTTTTTAGGTTCCCACAAATTAGAAAATTTTGTAGAAATCAACATGAGTAGGAGTTGATGCTTGACAA
AAAAATGATCATTATTGCCATTTATTTTTGAACAATATTGTCAACATCTAAGATCCCTCAGCCTCACCCACCACTATAGA
AAAAACCATCTATGAGTGGTTGGCGGATTGCTGTGTAAATCCACGGGCACTTGGCATACATACAATATGTTTGCCGAGTA
CCGTGTAAATTAAACTCGACAAACAAAAGGTAGTCAGTAATATTTGGTCTTCACTGTTTTCCCAAGAAAACACTTGTCAT
AAACAAAGAGCCTGACAAAGGAAGCAGACGATACTCGGCAAACAAAAAGTTCTCGGCAAATCACGGGCTACATGTTCCTA
CCCCCCCTCCGCGTTTGACGTTTCCATTACATTGACCGTTGTTTGCCGAGTGTCCACTAAGAGACACTCGCTTTCCTTAT
TCCATATCTTTTTTTAGTGTTGACCCTTTGCTGAGTACCCTATGGAGAACAGTAGGCTTATATTTCTGCATTTCTTTTTT
TATATGCAGTCATTGTTTGCCTAGTAACCAATGTCCAACACCTAGCTCCTCGTTCTTGCCTCGCTCCATTACAGGAAGGC
CACAGTTGGTGTCAGCTCTCACGGGATCCATGCCCTTACTGTGACCGGCCAGGAGAAGAGTGACAAGGTGGACTACCACA
AGACTTTGGTCCGCAAGGTCGAGAGCTAGGGGTACCATTGGTATGGTTGAGGATATATCTCACCATTTAGCATTGTCTGA
TGAAGAGGATGGTGCTGATGGCTGCCCTAACTAGACATTGCACCGCATCTTTAGCAACAGAGTTAGTTGCTATTACACTG
ACGGGTACAACCTCGATGACAATTACGATGCGAAGACGAATCCTCGGTGATGGATGTGGCGAGGAGCAGCCATGAGGCTG
AGGTGTTTTGCATTCAACATGGACAATGATATCGACCAAGCTGCCGAAATGTTCATCAAAATATTCCCTGAGAAGACCAA
CACAAGTTGGATGTTTTGACACATATTGGTGTATTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTTTTGAACAGGAGGAAAAAAACCCGGCCTCTGCATCAATCGATGCATGCAGCCATCTTATTAAAAAAGTAAC
AAAGTCTTAGGGTCACAAGATGCCCATAATCATAGTGTAAAAACGAAAGAAAACATAAAAAAGGTGCCACATCCGGCAAT
ACAGAGCAGGCTATGATGCCTAAACACCTAGCCTATTATCAGCTCGTCATCCAAATCAGCTGAAGATAGCCCGTGCTACC
GTCTCCTAACGGTTGCACCCAATAACCAAAATCTCCCTGGACTCCGCATGAGTGAGTAATGACCACATACGGATCCACGA
TGTAGCTCTGTAGATAACCTGCAAAAATTTCGTGAAGTTTGTCCCATTAAAAGTCAAATCATTTCTAGTATTCCATATCA
CCCAAAGTAGTGCACATATCCCTATCCGAATATGTCGTTGTGTATATGTCCATTCTATTGAGCCACGTCCCAAATAACGT
GTTTATGCTCGTTGGGGGATGGACGTTAAACGCTATAGGTATTGAGCGTCATAATATTTTTGCAAAAGGACACTAGAGAA
AGAGGTGTTTAATCATTTCATCACCATTGGTGTTTCATCACCATTGAAAGAGCGCCATAATAGTCCCAAATAACATGTTT
ATGCTCGTTGGGTGTGTGTTTATGTCTTAGAAAATACTTAAATGAATTTTTTGGATTACGAATCTTTTTATAAATGGTTT
GATCTAGATTCAACAGATCTTGACTTCCCCACCTACTAAGTAAAATCACCATTGATAGGATATATGCCTCTAGCAAAGTC
CTATCACCCTGCACCTCTACATCCCTACTTCGCTTAGCTAGCCAGCTACCTCTAACCCTCTGCAACACACAACCAAAGCT
TCGCAATATCTCTGTTCCAGAGTTCCCTTTGTCTGACCAGGCCACCTCCGTTGGTCACAATTCTTGGAGGGTCTGACCCG
GTGCATTGTTCAGGTATGTGATAAGGCTCGACTCTCCTGCCCCTTGGTACCTCTAAAATTGGGGGCTCTTGTTAACCCAA
AATCGTAAAACAAAATTAATTAGTTGTCCATTGTGGTGGAGTGGAGCAACCCCCCTCCCACCAAGTACCTGTGCCCGTGG
AGGAATCTGAATAAAGCTAGAGTGCAGGTTGATTATGATTCAATAAAGGTTCTTATTTGTAAATATGGCAGAGCTAAAGA
GATTTTTGCCATCTCTTCTCAATCCAGTGGCAAGGGTGCACCCAACACACTAGATACGCTCTCCCCTGATCAATGTTAAT
TGGAACCCTATGTACTACATAGTTCTCTTTGGGCCTCCTACCCATGAACTATTTTAGTAACAAACTGCCTAGTCTGACTA
GTTTGCGGCTACTTCCCTCCTTGATATTACCAGGTTTTTGTATATGTGATTAATAGGAAGGGCTTTAGCAATGATTTTTT
ACGTATATTCAAGCAGATCTGATGGTAGTGAGGGGTGGATCCAGGGTTCCATATAGTTATACTAGACATTATTCGGTAGG
TGTAGGCACAACTAGGACGCGAGGGCTCATTTCTTGATGAACTTAATGAGGAGCTAGATATGAATATCACGAGCTAAATC
CATTAGGGTGTGCGAAAACTTATATTTTGGAAGAGCTAAACGGTTCATTTCTTTCTGAACTCCAAAACGGCAATTAACTG
AGCAATTTCATAGTGGACCAAGGACCAAACGACCCGATTAAGAAGGTTGAGATAATTAGCACCCCTCATGTGTGCCAAGA
ATCACCACTCCAATGCACTCAATTGTGCACAAAATATCACCGCGGTTCAACGCGCTCAACGGTGCACTAACTCCATATAT
GCAGACTCACTCTCCAGGAAAAGGCGACCATGGGTAGGCAGTTACTCCTCTTAGTGAAAGGCGGCGAGGTTGTCGTTTCC
TCCTCCTCTACTCATCGCTCCAGTGGCAGGTGGAGGAGGGGGGGTCCTGTTTCTTTCCTATGCTTTTTTTATGGGTGGAC
TTAGTCTTTGGTGTGGTGGCGCATGAGGGATGAGGATGAAACCACGTCGAATAAAGTTGCCTCGACGACGCTCTTCATGG
CGGTGTCGAGAAGCCAATGGCGCCATCTTCTAAACATTAGGTCAGGGTGGCGAGATTAGGTCTTCTTTTCGTTGTTGTTT
TTGAGGTGGTGTCAGATGAGAAGAGTTGGATTTTCAAAAGCAGGATTGGTGGTTCGACGACTGCAGGTTTGGCGTCCTTC
CCCAACTATGCTGATGGAATGCGGCAGATTCGGTTCTAGGTTAGCACTTAGCACAGTGACATGTGCCTTGTTGCTTGCAG
GGGGCATGTACGTCGCCTCAGAAAGCCTTTAATGTGATGGTGATCCCCAGGATTGGGCGATGGTAGAGGTTGTGCTTATT
CTCTAGTGAGCGCCTCGATAGCATTGGATACTGTCTGCAACCCTTAATTTCGGTGTGTGCAGGGATCCCTATAGACCTTC
CAGTATTTTCTTATGTCTTGGGGTCCTCCCTACATAATTTTCATGACATCTGTCAACTTCTAGTTTCTCTATCATCAGTT
GCCGCTAGTGTTTGTCATGTAATCCATCTGATTGTTGATGAATGATACACGCAGTTTATTCCAAAACAGAAACTCCATAT
ATGCATGTTTGAAAAAAGAAACATATATGCATGGGACTTGATGTCGCAGTACGCTCTCGACAAGCGCGTGCCGTGTGGGA
TACTGAGACTACGTAC-------TCCCAAGTCTTCAACTCCATAATGGTAGTGTGACTTTTGACCGCATGAGACAGAGAG
AAAAGAAAGGAAGCTCCCATCGATCTATCACGAAGATT-GCT----TCTACTTTTGTACT-----ACGAGCGAGTAGCAA
AGCACACGGCCGGAGGAAAAGCAAAGC-AAAGCAAAGCAGATCTCACGTATAGACACACGCCCACACAAAGCAGCGGAGA
AAAGAAGGGAAAAAACAGAGACGCGCTA--TAGCTGCAACCTTTGGAATTATGGGCATGAATTACACGGCGGGAGA-CCG
GTAAGGAAAGCTGCCCGATCTGGTTGCTTTGAGTAAAACTATTC-----TAAGCCATCAATCAGCTAGCTTTGCCACTTG
AGTAAAGGAGAGATATTGGCAGTCTGGGAC----------------------------------AGGAGCCTTTTGTGAC
TGAAT-GGAACATATACTTTCCCATTG--------------TCCACTGTCAACATTCTTTTAGTGCTCACTCCACATGTC
AATTTTCTTTTCT----------CTAATGCTAGCTGCTTTCACATGCTTTATTAGGCGAGGTACCAAAAATTTGATTGGG
ACATAAGCAA-GGCTAGTTGC---AATGTTAATTGCATGCTCAGCTTCCAACTATAAATACACC---ATTCGAGCCTCGG
GACAAAGTCCATGCCTCATTTCAAGCAAGCTTCTCTCATCTCTGTATCCCAGTAACCTATCTCATT-CCAATTTCCAAGC
TTGGGGAACCGCAGCTT-----CTTCCTCATTTCCATTCGT---------AAGCAGCTCGACCA----CCTC---AACC-
--AAAGATGAAGATCGGGAAGGCTCCTGAACTCGTGAAGAAGGCAGCAGCGATGTGCAAGAGCAAGACTGGGGTGCTCGC
TGCCAGGCTCCTCATCCTCGCCTCGCTCCAGCGCCGCGGGATGGCCACGGCCGCGGTGGTCTCTCACAAGATTGACGCGC
TTATTATGGCCGACTGGGAGAGAGTTGACCGCCACAAGGCTCTCGCGCTACGCACGGTCGAGAAGAGACCAGTTGTCGTC
CATAAGGATGATTTGGCGGCCAATTTCCCTCGTCACTTGGGGATGATCGATCAAGAGAATGGTCATGGTGGATGCCATGC
TGACAGGACACTCCATCCCCTCTTCAACGACGACCACAATAACTGTCGTTACACTTGCGATGGTGATGTGCTACTTGATT
CATGTGATCAAGATGATGATGATGAGCCGTCAGTCCTGGATGTGATCAGGAGTAACCGAGAAGTTGAGGGGTTGGAGTTC
AATCTGGAGGAGGAGATTGATCAGGCTGCTGATATGTTCATTAGGAGGTTCCGGCAGCGGCTGA-ACGAGGGATTTTAGG
GTTTTGTTGGCACATGCATG----TACC-CTGGCTAGGGTGTTGTCTTCCTTTCAGGTGCCCACAAATTAGAAAATTTTG
TAGAAATCAATATGATCGAGTAGGAGTTAAAGCTTGACAAACGATGATCATTTCTGTCATTTATTTTTT-AACAATTTTT
GT--CATCTAAGATCCCTCGGCCTCACCCACCGCTCCCCAGCTCCCCTCTACCATTGCGCCCAACCACCACGTGCCTTAG
AAAGCTGACTCTATATATGCGGCACTTCTACAAATGGGGGCACTTCCATTGGCCCCTTGTGTTGTCTTT-----------
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>chr5D_328
TAAG----------------------------------------------------------------------------
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-AAAAAAAGGAACCTTCCATCGATCTATCACGGAGATTTGCT----TCTAC-TTTGTACT-----AGGAGCGAGTAGCAA
AGCACACGG----AGAAGGAAAGCTAATTA-----AGCAGATCTCAGGTAC-----CACACCCACACAAAGCAGCGGAGA
AAACAAGGGG-AAAACAGAGACGCGCTA--TCGCTGCAACCTTTGGAATTCTATGCATGAATCACACGGCCGGAGA-CCG
GCAAGGAAACCTGCCCGGTCTGGTTGCTTTGGGCAAAACTATAC-----TAAGCCATCAATCAGCTAGCTTTACCACTTG
ATTAAAGGAGAGAGATTGGCAGCCTGGGAC----------------------------------ATGTGCCTTTTGTGAC
TTAAT-GGAATATATATTTTCCCGTTG--------------TCCACTGTCAACATTCTTTTAGTGCTCACTCCACATGTC
AATTTTCTTTTCT----------CTAATGCTAGCTGCTTTCACATGCTTTATTAGGCGAGGTACCACAAATTTGATCGGG
ACATGAGCAA-GGCTACTTGCAATAATGTTATTTGCATGCTCAACTTCCGAC-ATAAATACACC---ATTGGAACCTCAC
GACAAAGCCCATGCCTCATTTCAAGCAAGCTTCTCTCATCTCTGTATCCCAGTAACCTATCCCATT-CCAA-------GC
CTGAGGCACCGGAGCTT-----CTTACTCGT---------TTCCATTCATAAGCAGCTCGGCTAC---CCCC---AAAC-
--AAAGATGAAGATCGGGAAGGCTCCTGAGCTCGTGAAGAAGGCAGTAGCGATGTGCAAGAGCAAGGCCAGCGTGCTCGC
TGCCAGGCTCCTCATCCCCGACTCGCTCCAGCACCGCAAGATGGCCACGGCCGCGGTGGTCTCTCACAAGATCGACGCGC
TTATTATGGCCGACTGGGAGAGATTTGACCGCCACAAAGCTCTCGCGTTGTGCACGGTCGAGAAGAGACCGGTCGTCGTC
CATGAGGATGATTTGGCGGCCAATTTCCCTCGTCACTTGGCGATGATCAGTCAAGAGAATGGTCATGGTGGCTGCCATGC
TGACAGGACACTGCATCCCCTCTTCAACGACGACCACATAAACTGTCGTTACACTTACGATGGTGATGTGCTACTTGATT
CATGTGATCAAGACGATGATGATGAGTCGTCAGTCATGGATGTGATCAGGAGTAACCAAGAGGTTGAGGGGTTGGAGTTC
AACATGGAGGAAGAGATTGACCAGGCTGCTGATATGTTCATTCGGAGGTTCCGGCAGCAGCTGA-ACGAGGGATTTTAGG
GTCCTGTTTGCACATGCATG----TACCTCGCCTTAGGGTGTTGTCTTTCTTTTAGGTGCCCACAATTTAGAATTTTTTG
TAGAAATGAGTATGATCGAGTAGGATTTGAGGCTTGACAAACAATGATCCTTTTTGTCATTTATTCTTTTAACAATTTTG
TCAACATCTAAGATCCCTCGGCCTCGCCTACCGCTCCTCAGCTCCCTTCTGCCATTGCGCCCAACCACCCTGCGCCTCAG
AAAGCCCACTGTATATATGCATCACTTCCACAAATGGGGGCACTTCCATTGCCCCGGCCC--------------------
-----------------------------------TTGTGTTTTCTTTCTCTTGG-------------------------
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------------------------------------------AAGTCCCTAAAATTTTTACCAAAGGTTTCCACAATTTA
CACAAGTTGCATCTTCCAAATATGCCGCTGCCATGGCGACTAGTATCTCTAACTCTCAAATAAGAG----AGCCTACTCC
CCCGCACGACCCAGAGGTTTGCTGCTCCGGCTACTGCTGCTCCTTC-CCTCTGGAATACACAAATGCAAATTTCAGGCGA
CTTGCATT------------------------------------------------------------------------
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>chr5A_339
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----------AAACTCCCATCGATCTATCACGGAGATT-GCTCCCTTCTAC-TTTATGCAAGTTGACGGGCGAGCAACAA
AGCGGCCGG----AGGAGAGGCAAACC-TA-----CGCAGATCCCACGTACAGCA--------ACACAAAGCAGCGGGGA
AAACGAAGAA-AAATCAGAGACGCG-----TAGCTGCAACCTTTGGAATTCTGAGCATGAATCACACGGCCGGAGACCCG
GCAAGGAAAGCTGTCCGGTCTGCTTGCTTTGGGAAAAAATATTC-----TAAGCCATCTATCAGCTAGCTTTACCACTTG
ATTAAAGGAGAGATATTGGCAGTTTGGGACACCAACCCAAAAGGGTCAATCCTAGCCCTGGGACAGGTGCCTTTTGTGAC
TTAATTGGAATACATACTTCCCCATAAGTTCCTTGCTTAGTTCCACTATCAACATTCTTGTAGTGCTCACTCCACATGCC
TATTTTTT-CTCTCTGGTATATGCTATTGCTAGATGCTTTCACATGCTTTATCACGCGAGGTACCAAAAGTTTGAGCGTG
ACATCACCAA-GGCTAGTTGC---AATGTTAATTGCATGCTCAGCTTCTCACTATAAATACACC---ATGAGAGCTTCAG
GACAAAGCCCATGCCTCCTTTCAAGCCAGCTTCTCTCAGCTT-------------------CTTTT-TCAA-------GC
CTGAGGCGTCACAGCTC-----CTTACTTGC---------TGCCCTTCATACGAAGCTGATCGGCCACCTCTCAACAAC-
--AAAGATGAAGATAGGGAAGGCTCCTGAGCTCCTGAAGAAGGCCGTAGCGATGTGCAAGAGCAAGACCA----------
--CCAGGCTCCTCATCCTCGCCTCGCTCCAGCGCCGCAGGATGTCCATGGGCGTTGTGGTCTCTCGCAAGATCGACGCGC
TCATTGTGGCCGACTGGGAGAGAGCGGACCGCCACAAGGCTCTCGCGCTACAAACGGTGGAGAAGAGACCGGTAATCATC
CAGGAGAGTGACTTGGAGGCCAATTTCTCTCGTCACTTGGCGATGTTCGGTCAAGAGAATGGTCATGGTGGCTGCCCAGC
TAACCGAACACTGCATCCCCTATTCAACAACAACCACGCCAACTACCATTACACTGAAGATGATGATGTGCTACTTGATT
CATGCGATCAAGATGATGATGATGAGCTGTCAGTCATGGATCTGATCATGAGCAATGGAGAAGTTGAGGGGATGGAGTTC
AACATGGAGGAGGACATTGATCAAGCTGCTGATATGTTCATTAGGAGGTTCCGACAGCGGCTGA-ATGAGGGATTTTAGG
GTCTTATTAGCACATGCATGCATGTATCTTAGATTAGGGCGTTGTCTTCTTTTTAGGTGCCCAAAAATTAGAAAATTTTG
TGGACATCAATATGAA----TAGGAGTTGAGGCTTGACAAGCAGTTATCCT-----------------------------
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>chr5D_455
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---------------------------------------------------------------ACACAAAGCAGC--GGA
AAAGAAGGAA-AAAACAGAGACGCGCTAGCTAGCTGCAACTTTTGGAATTTCGGGC--------------CGGAGA-CCA
G--AGACCATCTGCCCGGTCTGGATGCTTTGGGTAAAAGAATTTGCTATTAAGCCATCGATCAGCTAGCTTTACCACTTG
ATTATAGGAGAGATATTGACAGTTAGGGACCCCAACCCAAACGAGCCAATCCTAGCCC-GGGGCAGGTTCCTTTTCTAGC
TTAATTGCATTATATACTTCCCCAAAAGTTCCTTGCTTAGTTCCACAGTGGACGTTCTTATAGTGCTCACTCCACATGCC
AAAAAAATTCCTCCA--------------CTAGCTGCTTTTGCATGCTTTATCATTGACA-TACCAAAAGTTTGAT-GTG
ACATGAGCAAGGGCTAGTTGC---AATGTTAATTGCATGCTTAACTTCTGACTATAAATACACCATTATTGGAGCCTCAG
GACAAAGCCCATGCCTCATTTCAAGCCAGCTTCTCTCATCTCAGTATCCCAGTAACCTACCCCATT-CCAA-------GC
TTGAGGCACCCCATCTT-----CTTACTAGT---------TTTGCTTCCTAAGCAGAAA----------TCTCAGAAAG-
--AAAGATGAAGATAGGGAAGGCTCCTGAGCTCCTGAAGAAGGCGGCAGCAATGTGCAAGAGCAAGACCG----------
--TCAGGCTCCTCATCCTTGCCTCGCTCCAGCGTCGTAGGATGGCCACGGCTGCCGTGGTCTCCCACAAGATCGATGCGC
TCATTGTAGCCGACTGGGAGAGAGCGGACCGCCACAAGGCTCTCGCGCTGGGCATGGTAGAGAAGAGACCGGTCATCGTC
CATGAGAATGACTTGGAGGCCAATTTCTCTAGTCGCTTGGCGATGTTCGGTCCAAAGAATGGCCATGGTTGCTTCCCAGC
TGACCGAACACTACATCCCCTCTTCAATGATGACCATGAGAACTATCGTTACACTGACGATGATGATGTGGTACTTGATT
CATGTGATCAAGATGATGACGATGAGCCATCGGTCATGGATGTGATCAAGATAAACCCAGAAGTTGAAGGGTTGGAGTTC
AACATGGAGGTGGAGATTGATCAGGCTGCTGATATGTTCATTAGGAGGTTCCGGCAACGGCTGAAACGAGGAATTTTAGG
GTCTTGTTTGCACATGCATG----TACCTCGGTCTAGTGATTTTTCTTCTTTTTAGGTGCCCACAAATTAGAATTTTTTG
TTGAAATAATTATGAA----TAGGAGTTTATGCTTGAAAAACGATGATCCGTATTGCCATTTGTTTTCA-AATAATTATG
TCAACATCTAAAATCATTCTGCCTTGCCCAACTTT-------TCCCCTGTACCATCCCGTCCACCCACCCCGCACCTCAC
AAAGCTGATTGTATATATGCAGTACTCCTACCATCGGTG--ACTTCCATTGTCCCCTTGTGTTTTCTTT-----------
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>chr5B_535
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------------------------------------------------------------------CGGCCGGAGA-CCG
CCAAGGCAAGCTGTCCGGTCTGGTTGCTTTGGGCCAAACTATTC-----TAAGGCATCAATCAGCTAGCTTTACCACTTG
ATTAAAGGAGAGATATTGGCAGTCTGGGACCCCAACCCAACAGGGCCAATCCTAGCCCTGGGATAGCTGCCTTTTGTGAC
TTAATTGGAATACATACTTCCCCATAAGTTCCTTGCTTAGTTCCACTGTCAACATTCTTGTAGTGCTCACTCCACATGCC
TATTTTTT-CTCTCCAATATATGCTATTGCTAGCTGCTTTCACATGCTTTATCACGCGAGGAACCAAAAGCTTGATCTTG
ACATGAGCCGGGGGTGGTTGC---AATATTAATTGCATGCTCAGCTTCCGACTATAAATACACC---ATTGGAGCCTCAG
GTTAAAGCCCATGCCTCATTTCA---------------TCTCTGTATCCCAGTAACCTACCTGATT-GCAA-------GC
CTGAGGCACCATAGCTT-----GCTACTTAT---------TTCCTTTCATAACCAGCTCGGCCAT---CTCC---AGAAC
CAAAAGATGAAGATCGGGAAAGCTCCTGAGCTCCTGAAGAAGGCTGCAGCGATGTGCAAGAGCAAGACCA----------
--CCAGGTTTCTCATCCTTGCCTCGCTCCAGCGTCGTAGGATGGCTACGGCTGCTGTGGTCTCCCGCAAGATCGACACGC
TCATTGTGGCCGACTGGGAGAGAGCAGACCGCCACAAGGCTCTTGCGCTGGGCATGGTCGAGAAGAGACCGGTTATCGTC
CATGAGAGTGAATTTGAGGCCAATTTCTCTCATCGCTTGGCGATGTTCGGTCAAGATAATGGTCATGATTGCTTTCCAGC
TGACCGAACACTGCATCCCCTCTTCAACGAGGACCACGAGAATTGTCGTTACACTGACGATGATGATGTGGTACTTGATT
CATGTGATCAAGATGATGACGATGAGCCATCGGTCATGGATGTGATCAAGAGAAACCGAGAAGTTGAAGGGTTGGAGTTC
AACATGGAGGAGGATATTGATCAAGCTGCTGATATGTTCATTAGGAGGTTCCGGCAACGGCTGA-ACGAGGAATTTTAGG
GTCTTGTTTGCACATGCATG----TGCCTCGGTCTAGCGAGTTGTCTTCTTTTTAGGTGCCAACAAATTAGAAAATTTTG
TAGAAATCAATGTGAG----TAGGAGTTGATGTTTGATAAACAATGATCCATATTGCCATTTATTTTCA-AACAATTTTA
TCAACATATAAAATCCCTCGGCCTCACCCGACTTT-------TCCCCTCTACCATTACGTCCACCCACCCTGCACCTCAG
AAAGATGACTATATATATGCAGTACTCCTACGAACAGGGCACTTTTCATTGTCCCCTTGTGTTTTCTTT-----------
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>chr5A_695
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-----------------------------------------TCCACTGTCAACATTCTTATAGTGCTCACTCCACATGCC
TATTTTTT-CTCTCTGGTATATGCTATTGCTAGCTGCTTTCACATGCTTTATCACGCGAGGAACCAAAAGTTTGATCCTG
ACATGACCTA-TGGTGGTTGC---AATGTTAATTGCATGCTCAGCTTCCGACTATAAGTGCACC---ATTGGAGCCTCAG
GACAAAGCCCATGCCTCATTTCAAGACAGCTTCTCTCATCTCTGTATCCCAGTGACCTACCCGATT-CCAA-------GC
CTGAGGCACCATAGCTTAGCATCCCACTTAT---------TTCCCTTCATAACCAGCTCGACCAT---CTCTCAGAACC-
--AAAGATGAAGATCGGGAAGGCTCCTGAGCTCTTGAAGAAGGCGGCAGCAATGTGCAAGAGCAAGACCG----------
--CAAGGCTCCTCATCCTTGCCTCGCTCCAGCGCCGTGGGATGGCTAGAACAGCCGTGGTCTCTCGCAAGATCGACGCGC
TTATTGTGGCCGACTGGGAGAGAGTGGACCGCCACAAGGCTCTCGCGCTGCGCACAATGGAGAAGAGACCAATCATCGTC
CATGAGAGTGACTTTGAGGCCAATTTCTCTCATCACTTGGCGGTGTTCAACCAAGAGAATGGTCATGGTGGCTGCCCAGC
TGAGTGGACACTGCATCCCCTCTTCAACAACGACCACGACAACTGCCGTTACACTAAGGATGATGATGTGCTA----ATT
CATGTGATCAAGACAACGATGATGAGCCATCTGTCGTGGATGTGATCAGGAGCAACCAAGAAGCTGAGGGGTTGGAGTTC
GACATGGAGGAGGATATTGACCAGGCTGCTGATATGTTCATTAGGAGGTTTCGGCAGCGTCTGA-ACGAGGGATTTTAGG
GTCTTGTTTGTACATGCATG----TACCTTGGCTTAGGGTGTTGTCTTCTTTTTAGGTGCCCAAAAATTAGAAAATTTTG
TAGAAATCAATATGAG----TGGGAGTTGAGGCTTGACAAACAGTTATCCTTATCATCATTTGTTTTTG-AAATCTTTTG
TTAACATCCAAGATCCCTCAGCC---------------------------------------------------------
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>chr5D_695
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-----------------------------------------TCCATTGTCAACATTCTTTCAGTGCTCACTCCACATGTC
AATTTTTTTCTCT----------CTAATGCTAGCTGCTTTCACATGCTTTATTAGGCCAGGTACCAAAATTTTGATCAGG
ACATGAGCAA-GGCTAGTTGC---AGTGTTAATTGCATGCTCAGCTTCTGACTATAAATACACC---ATTAGAGCCTCAG
GACAAAGCCCATGCCTCATTTCAAGCCAGCTTCTCTCAGCTT-------------------CTTTTCTCAA-------TC
CTGAGGCATCACAGCTC-----CTTACTTGT---------TGCCCTGCATAAGCAGCTGATCGGCCACTTCTCAGAACC-
--AAAGATGAAGATCGGGAAGGCTCCTGAGCTCTTGAAGAAGGCGGCAGCGATGTGTAAGAGCAAGACCG----------
--CCAGGCTCCTCCTCCTTGCCTCGCTGCAGCGCCGCAGGATGGCCACAGGCGCGGTGGTCTCACGCAAGATCGACGCAC
TCATTGTGGCCGACTGGGAGAGAGCAGACCGCCACAAGGCTCTCGCGCTGCACATGGTCGGGAAGAGACCGATAATCATC
CATGAGAGTAACTTGGAGGCCAATTTCGCTCATCACTTGGCAATGTTTGGTCAAGAGAATGGTGAGGCTGGCTGCCCAAC
TGACCGGACATTGCATCCCCTATTCAACAACGACCACGACAACTGCCCTTACACTGACAATGATGATGTGCTACTTGATT
CATGCGATCATGACGATGATGACGAGCCATCAGTCGTGGATGTGATCAGGAGCAATCGAGAAGTTGAGGGGGTGGAGTCC
AACATGGAGGATGAGATTGATCAGGCTGCTGATATGTTCATTAGGAGGTTCCGGCAGCAGCTGA-ACGAGGGATTTTAGG
GTCTTATTTGCACATGCATG----TACCTCAGCTTAGGGTGTTGTCTTCTTTTTAGGTGCCCACAAATTAGAAAATTTTG
TAGAAATCAATATGAA----TAGGAGTGGAGGCTTGACAAACAGTTATCCTTATTGTCATTTATTTTTG-AACAATTTTC
TCAACATCTAAGATCCCTCGGTCTTGCCAACCACT---------------------------------------------
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---------------------------------------------
>SNPs
S--SSS-SSSS-S-SS-SSSSSSSS-S-SSSSSS-S-SS-SSSSSSSS-SSS-SS-SSSS-SSSSSS-SSSSS-SSSS-S
-S--SS-SSSSSS--S--SS---SSSSSS-SSSS-SSSSS--SSSS--SSSS-SSSSS--SS-S-SSSSSS-S--SSSS-
SSSS-SS-S---SSS-S--SSS-SSS-S--S-SSS-SSSSSSSS-SSSSSSSSSSS-SSSSSSSSSSSSSS-S-SS-SS-
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-----------------------------------------------------------S-----S-----------SS-
----------S----SSSSSSSS-------------S-------------S-------------SSS----SSS-S----
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---------------------S---------SS----------------------S------------------------
-S-----------------------------------------------------------S----------S-S-----
-----------------------------------------------------------------------------S--
------------------------------------------------------------------S-------------
-------------------------------------------------------S------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-S-----------S-------------S----------------------------------------------------
------------------------S-------------------------------------------------------
S---------------------------------------------------S-S-------------------------
-----------------------------S---------S----S-S--S-------S-----------S----------
--------------------------------------------------------------------------------
----------------------------------------------------S------------------S----S---
----------------------------S----------------------S-------------------S--------
--------------------------S--S------------------------------S-------------------
--------------------------------------------------------------------------------
-----------------SS--------------------------------S-------------S--------------
--------------S-----------------------------------S-----------------------------
---S-----S---S-------------------------------------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------SS----------SSSS-S---------
--S-------------S--S----------------------------------------------SSSS----------
---------S-------S-----------------------S-S-SS----S------S-------S-------------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_5548
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--------AGGCACCACACCTTCTTACG----------------------------------------------------
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>reverse_7117
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----------------------------------------------------------------------------TTTA
GTACGCCGGACCCAAC-----------------------------
