>input_sequence_76079
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---------------TGAAAGAATGGACAGAAGGTCTGTCATCGCTTGTTTTCTCGTGATGCTTGTGTTGTTCGAAAGCG
CATCTGCAGGTGTGTTCTCACATTTGTTGTTCTTAATTAAGTAGAGTTCCTTCTCTC-T-AAAAAAAGTAGAGTTCCTAG
AGTAGATGTTATTTCAAAAGAATAACCTTGAAAAATCTACATAAGATTTCAAGTCGTATTACCAAGAGTTTTCTCAAATA
TGATGTTGATACAGATTGCATGCATGTCCTTGAGGCTTTTCGCATCGTACCGCTTTTATGCAGGGTTGG-AAAATCATGT
GTTACAGTCAATGTTTCACTATTATGGTATTAATTTTCATTGGTTTGTGATGCGCAGACTGTGAGGATGTTCAATTTCAG
ATCTTGTTCTGCATCAAATCATCATGCGAGGATATATGCAAGTTTCAGTGGAAGGGTAAGAAGGTCTACAATCCTTGGTG
TGATAAGTTCTTCGGTGGCTACTGCCACTGCAAGATTTGCCATGATGGATAGAACTTAATGGATATGTTAGGCGCACTTC
ATGCTAGAAATAAA------------------------------------------------------------------
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------------------------------
>chr5D_1_TraesCS5D01G510600
TGCTGGAACCACTCCAAGCTTTGCTATAATGGTGTTTGATTTTTTCTACCACCGTCTTTTGTGTTTTGCTACTCCCCATT
TTCTGA--TTTTT-TGCTGGATCGATCTTTTTTGCTGGAACCATTCAAA-GAGAGAGAAAAAGGAGGCCGTGAATGGCGT
GGAGGGGGATGCAAACATA---TTTT-TTT-TGCTACAACCAGCGTCCTAGGA-AGCTTCAATCGAAGGCAAT--GAATT
TTGGGGACCGGCCACACCATGCGACCGCGAAAGCTGGAACCGTCGCCGAAAAAAGCTTCAACCGTTTTGTGAAAAAGCTT
CAATG-----------------GGCGTGAGAAAAAAGCTGCAGCCGACGGCATAGCGGTACGGCGACCGACGGCGAGTAC
GGCGACTGGTGGCGAGCTGGTGATGCTTCAAGACAGGCCTCAAAGCGTCCATGGCGG----------TGTCCAGG-GCAA
AAAGTTGGATGCGA-TTTTTTCTAGCAAAAGAA-A-GCGATGCAAAAAGGTTGATCTGACGGGGTTGGCAAAAAGATAAA
CTGACGTGTCAGATGTGACCGGTCGAACCGTTCCGCCGGTGCATGCGTACAAGCCAAGGCTCGAACCTGCGTCGGCCACG
AGACACACCGCCTCGCTGGCCACTGGGCTAGGAGCCCATCCACTGTGAAGATAAGAATACGTAGAATATATGTCATTAAT
TACCAAATTATTATTCTACTTTAACTATTGTGAACAAAAGTTAACTAAAAATGGAGACCACCTTTTAGTACTTGGTCATG
ATATCTTATGGATGCACTTCGATATCTTCGTCTAGAAGTCTAGATATGGCACGTCA--TTTCATATCCTTTGGACATTAT
GTGTTATCACTCTGGCTTTCAGTTGGGACCGCTTATTAGTAC--TTGGTAATCTTATCTTGTGGATGCACCTTTATATGT
CTTTT--------TCTAGAAGTTCTGAGTTGCCACGTAATTCCATATCCTTTTGACATTATATATTGTCCCTCTGGCTCT
TGTCGGAATGTATACTGAAAGAATGGACAGAAGGTCTGTCATCGCTTGTTTTCTCGTGATGCTTGTGTTGTTCGAAAGCG
CATCTGCAGGTGTGTTCTCACATTTGTTGTTCTTAATTAAGTAGAGTTCCTTCTCTC-T-AAAAAAAGTAGAGTTCCTAG
AGTAGATGTTATTTCAAAAGAATAACCTTGAAAAATCTACATAAGATTTCAAGTCGTATTACCAAGAGTTTTCTCAAATA
TGATGTTGATACAGATTGCATGCATGTCCTTGAGGCTTTTCGCATCGTACCGCTTTTATGCAGGGTTGG-AAAATCATGT
GTTACAGTCAATGTTTCACTATTATGGTATTAATTTTCATTGGTTTGTGATGCGCAGACTGTGAGGATGTTCAATTTCAG
ATCTTGTTCTGCATCAAATCATCATGCGAGGATATATGCAAGTTTCAGTGGAAGGGTAAGAAGGTCTACAATCCTTGGTG
TGATAAGTTCTTCGGTGGCTACTGCCACTGCAAGATTTGCCATGATGGATAGAACTTAATGGATATGTTAGGCGCACTTC
ATGCTAGAAATAAATAAGTCATAACTTTGTGTCCTGAATCACTGATTTATGCATGGGATTGTATGTTTGGGAGAGCGTCA
TGCCATGTGAGACATA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ATCTATA
CTAGATAGGTTGG--ACACACTATGCTGCGCCGTTGGTGTTGTTGGGTTTCCT-------AAAAAACAA---TACTCACC
ATGTTTCAAAATATGAGGTGTATTAATATTTTGAAAAGTCCAACC------TTTTAAGTTCGATCAAATTTGTAGAGAAA
TATATCAAAATTCATAGTATCAAATCGATATGATTAGATTCATCTTGAAATGAATTTCC----AT-AC--TTTTTGTTTA
ATATTATGGATGTCGGTATTTTTTGCTCTGAGCTTGGTCAAAGTTAAAAAAATA--ACTTCCCAAAAAAGTAATACCGCT
TA---------TATTTTGGAACTGATGGAATATTTAGTTTGGCCGGTGGG-------------GGAGCTGACGGAGTGT-
---T---------TTTTTTATGCGGTGATTTGATGGGCCTTTC---------------GTGTTATCCGCTAACC-AAAGT
ATATTTATGTGGGGAAATTTCTGCGTCGGGGGCTCCATGTACTATATTGGTGCTACAATATCACATAGTGGTGCTT-CTT
TTTTTAGGTGGTGGAGGGCACTAATAGAAAAAGGGCCATTTGTCCCACTTCATAAGGCCCATCTGTCCCGGTTGGGGAAC
CGGGACTAAAGGGTCGTTACTAATGCCTAGGCCTTTAGTCCCGGTTCTTATACTAACCGGGACAGATGGGCATCCACGTG
GTCGGTGCTGCGAGCCCAGGCAGGAGGCCCTTTAGTCCCGGTTGGTGGCACCAACCGGGACCAATAGGCACCCACGCGTC
AGCTGTTCAGGGGCTAGGGTTTTTTTTTTTTTGAAAGGGGGTGGATTTGGGGGTTTTGTATGGTTAATTAAGGTGTTTCA
TATATTGTGTTAGGTAGCTAATTAATTAATAGAGAGAAGTGTCCTCTCTTATCTCCGTGCTTGGTCGACGCTACGTACTA
TACATAGAGAGGCCCTCGACACGCTAGCTA
>chr5B_1
TGCTGGAACCACTTCAAGTTTTGCTACAACGGTGTTCGATTTTTGCTACCACCGTCTTT-GC-TTTTGCTACTCCCCTAT
TTCTGA--TTTTT-TGCTGGATCGATCTTTTCTGCTGGAAGCTCTCAAA-GAGAGAGAAAAAGGAGGTTGTGGATGCCAT
GAAGGGAGCTGCAAAGATTAC----AAAAAATGCTACAACCAGCCTCCTAGGGGAGCTTCAATCGAAGGTGAT--GAATT
TTGGGGACCGGCCAC--CACGCAACCGCGAAAGCTGGAACCGTTGATGAAAAAAGCTTCAACTGTTTTCTGAAAAAGCTT
CAATG-----------------GGCGTGAGAAAAAAGTTGTTGCCGACGGCATGGCGGTGCGGCAAAGGACGGCGAGGAC
GG-GACCGGCGGCGAGCTGGTGATGCTTCAAGGCAGGCCTAAGAGCGTCCATGGCGG----------GTGTCCAA-ACGA
ACAACTGGATGTGC-TTTTTTAGAAAGAAAAAA-C-GAGGC---AAAAGGCTGATCTGAC--GGTTGGTAAAAAGGTAAA
CTAATGTGCCAGATGCGACCGGCCGAACCGTTCCGCCGGTGCA-------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr1D_1
TGCTGGAACCACTCCAAGTGTTGCTACAACGGTGTTTGATTTTTGCTACCACCGTCTTTTGC-TTTTGCTACTCCCCTAT
TTCTAA--TTTTTTTGCTGGATCGATCTTTTCTGCTGGAACCTCTCAAA-GAGAGGGAAAAAGGAGGCTGTGAATGGCGT
GAAGGGAGCTGGAAACATTACAAAAAAAAAATGCTACAACCAGCGTCCTAGGA-AGCTTCAATCGAAGGCGAT--GAATT
TTGGGGACTGGCCAC--CACGCAACCATGAAAGTTGGAACCGTTGACGAAAAAAGGTTCAACTGTTTTGTGAAAAAGCTT
CAACG-----------------GGCGTGAGAAAAAAGCTGCAGCCGGCGGCATGGTGGTGCGGCAATGGAGGACGAGGAC
GGCGACCGGCGGCGAGCTGGTGATGCTTCAAGGCAGGCCTCAGAGTGTCCATGGCGG----------GTGTCCAG-ACGA
ACAACTGGATGCGA-TATTTTAGCAAAAAATAA-AAGATGC---AAAAGGCTGATCTGAT--GGTTGGTAAAAAGATAAA
CTGACGCGTCATATGCAACCGGCCGAACCGTTCCGTCGGTGC--------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr6B_1
TGCCGGAACCACTCCTAGTTTTGCTACAACGATGTTTGATTTTTGCTACCACCATCTTTTGTGTTCTGCTACTCCCCATT
TTTAGA--TTTTT-TGCTGGATCAATCTTTTTTGCTGGAAACATTCAAA-GAGAGAGAAAAAGGAGGTTGTGAATGACAT
GGAGGGAGATGCAAACATA---TTTTTTTT-TGCTACAACCAGCGTCCTAGGA-AGTTTCAGTCGAAGGAGATGAGAATT
ATGGGGACCGGCCAC--CACACAACCGCGAAAGCTGGAACCGTCGGCGAAAAAAGCTTCAAACGTTTTGTGAAAAAGTTT
CAATG---------------TGGGCGTGAGAAAAAAGCTGCAGCCGACGGCATGGCGGTACGACGACTGATGGCGAGAAC
AGTGACCGGCGGCGAGCTGGTGATGCTTTAAGACATGCCTCAAAGCGTCCATGGCGG----------GTGTCCAGGGAAA
AAAGCTGGATGCGG-TTTTTTTTACCAAAAAAA-A-GCGATGCAAAAAGGTTGATCTGAT--GGTTGGTAAAAAGATAAA
CTAACGTGTGAGATGCGACCGGCCGAACCGTTTCGCCGGTGC--------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr6B_1
TGCTGGAACCACTCCAAGTTTTTCTACGACGGTGTTCGATTTTTGCTACCACCGTCTTT-GC-TTTTGCTACTCCCCTAT
TTCTGA--TTTTT-TGCTGGATCGATCTTTTCTGCTGGAAGCTCTCAAA-GAGAGAGAAAAAGGAGGCTGTGGATGCCAT
GGAGGGAGCTGCAAAGATTAC---AAAAAAATGCTACAACCAGCCTCCTAGGG-AGCTTCAATCCAAGGAGAT--GAATT
TTGGGGACCGGCCAC--CACGCAACCGCAGAAGCTGGAACCGTTGACGAAAAAAGGTTCAACTGTTTTCTGAAAAAGCTT
CAACCATGAAAAAGCTTCAATGGGCGTGAGAAAAAAGCTGCAGCCGACGGCATGGCGGTGCGGCAAAGGACGGCGAGGAC
GGGGACCGGCGGCGAGCTGGTGATGCTTCAAGGCAGGCCTAAGAGCGTCCATGGCGG----------GTGTCCAG-ACGA
ACAACTGGATGTGC-TTTTTTAGAAAGAAAAAA-C-GAGGC---AAAAGGCTGATCTGAC--GGTTGGTAAAAAGGTAAA
CTAATGTGCCAGATGCGACCGGCCGAACCGTTCCACCGGTGCA-------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr6A_1
TGCTGGAACCACTCCAAGTTTTGCTACAATGGTGTTTGATTTTTGCTACCACCGTCTTTTGTGTTTTGCTACTCCCCATT
TTCTGA--ATTTT-TGCTGGATCAATCTTTTTTGCTGGAACCATTCAAA-GAGAGAGAAAAAGGCGGCTGTGAATGGCGT
GGAGGGAGATTCAAACATAATCTTTT-TGT-TGCTACAACCAGCATCCTAGGA-AGCTTCAATCGAAGGCGAT--GAATT
TTGAGGACCAGCCACACCACGCAACCGCAAAAGCTGAAACCGTCGCCAAAAAAAGCTTCAACCGTTTTG-----------
------TGAAAAAGCTTCAATGGGTGTGAGAAAAAAGCTGTAGCCGACGGCATGGCGGTAC-------------------
AGCGACCGACGACGAGCTGGTGATGCTTCAAGACGGGCCTCAAAGCGTCCATGGCGGTGTCCGGCGGGTGTCCAGGGAAA
AAAGTTGGATGCGATTTTTTTAGCAAAAGAAAG-C-GATGCA-AAAAAGGTTGATCTGAC--GGTTGGTAAAAAGATAAA
TTGACGTGTCAGATGTGACCGGCCGAACCGTTCCGCCGGTGCA-------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr3B_1
TGCTGGAACCACTCCAAGTTTTGCTACAACGGTGTTCGATTTTTGCTACCACCGTCTTT-GC-TTTTGCTACTCCCCTAT
TTCTGA--TTTTT-TGCTGGATCGATCTTTTCTGCTGGAAGCTCTCAAA-GAGAGAGAAAAAGGAGGTTGTGGATGCCAT
GGAGGGAGCTGCAAAGATTAC---AAAAAA-TGCTACAACCAGCCTCCTAGGGGAGCTTCAATCGAAGGTGAT--GAATT
TTGGGGACCGGCCAC--CACGCAACCGCGAAAGCTGGAACCGTTGACGAAAAAAGCTTCAATTGTTTTC-----------
------TGAAAAAGCTTCAATGGGCGTGAGAAAAAAGCTGTTGCCGACGGCATGGCGGTGCGGCAAAGGACGGCGAGGAC
GG-GACCGGCGGCGAGCTGGTGATGCTTCAAGGCAGGCCTAAGAGCGTCTATGGCGG----------GTGTCCAG-ACGA
ACAACTGGATGTGC-TTTTTTAGAAAGAAAAAA-C-GAGGC---AAAAGGCTGATCTGAC--GGTTGGTAAAAAGGTAAA
CTAATGTGCCAGATGCGACCGGCCGAACCGTTCCGCCGGTGCA-------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr3B_1
TGCTGGAACCACTTCAAGTTTTGCTACAACGGTGTTCGATTTTTGCTACCACCGTCTTT-GC-TTTTGCTACTCCCCTAT
TTCTGA--TTTTT-TGCTGGATCGATCTTTTCTGCTGGAAGCTCTCAAA-GAGAGAGAAAAAGGAGGTTGTGGATGCCAT
GGAGGGAGCTGCAAAGATTAC---AAAAAA-TGCTACAACCAGCCTCCTAGGGGAGCTTCAATCGAAGGTGAT--GAATT
TTGGGGACCGGCCAC--CACGCAACCACGGAAGCTGGAACCGTTGACGAAAAAAGCTTCAACTGTTTTC-----------
------TGAAAAAGCTTCAATGGGCGTGAGAAAAAAGCTGTTGCCGACGGCATGGCGGTGCGGCAAAGGACGGCGAGGAC
GG-GACCGGCGGCGAGCTGGTGATGCTTCAAGGCAGGCCTAAGAGCGTCCATGGCGG----------GTGTCCAG-ACGA
ACAACTGGATGTGC-TTTTTTAGAAAGAAAAAA-C-GAGGC---AAAAGGCTGATCTGAC--GGTTGGTAAATAGGTAAA
CTAATGTGCCAGATGCGACCGGCCGAACCGTTCCGCCGGTGCA-------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr1A_1
TGCTGGAACCACTCCAAGTTTTGCTACAACGGTGTTCGATTTTTGCTACCACCGTCTTT-GC-TTTTGCTACTCCCCTAT
TTCTGA-TTTTTT-TGCTGGATCGATCTTTTCTGCTGGAACCTCTC-AATGAGAGAGAAAAGGGAGGCTGTGAATGGCAT
GAAGGGAGCTGCAAAGATTACA--AAAAAA-TGCTACAACCAGCGTCCTAGGG-AGCTTCAATCAAATGTGGT--GAATT
TTGGGGACGGGCCAC--CACGCAACCACGAAAGTTGGAACCGTCGACGAGAAAAGCTTCAACTGTTTTCTAAAAAAGCTT
CAACCATGAAAAAGCTTCAATGGGCGTGAGAAAAAAGCTGCAGCCGACAGCATGGCGGTGCGGCAACGGACGGCGAGGAC
GGCGAACGGCGGTGAGCTGGTGATGCTTCAAGGCAGGCCTGAGAGCCTTCATGGCGG----------GTGTCCAG-ATGA
ACAGCTGGATGTGA-TTTTTTACAAGAAAAAAACC-GATGC---AAAAGGTTGATCTGAC--AGTTGGTAAAAAGGTAAA
CTAACGTGCCAGATGCGACTGACTGAACCATTCCGCTGGTGC--------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr3D_3
--CTGGAACCACTCCAGGTTTTGCTACAATGTTGTTTGATTTTTTCTACCACCATATTT-GC-TTTTGCTACTCCCCTAT
TTTTGATTTTTTT-TGCTGGATTGATCTTTTCTGCTGGAACATCTC-AA-GAGAGAGAAAAAGGAGGTTGTGAATGGCGT
GGAGGGAGCTGTAAACATTAC---AAAAAA-TGCTACAACCAGCGTCCTAGGA-AGCTTCAATCGAAGGCGAT--GAATT
TTGGGGACCGGCCAC--CATGCAACCGCGAAAGCTGGAACTGTTGACGAAAAAAAAATCAACTGTTTTG-----------
------TTAAAAAGCTTCAATGGGCGTGAGAAAAAAGCTGCAGCCGACGACATGGCGGTGCGGCAACGGACGGCGAGGAC
GGCGACCGGCGGCGAGCTGGTGATGCTTCAAGGCAGGCCTAAGAGCGTCCATGGCGG----------GTGTCTAG-ACGA
ACAGTTGGATGCGA-CTTTTTAGCAAAAAATAG-C-GATGT---AAAAGGCTAATCTGAC--AGTTGGTGAAAAGATAAA
C-------------------------------------------------------------------------------
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------------------------------
>chr4A_7
------AACCACTCCAAGTTTTGCTACAATGGTGTTTGATTTTTGCTACCACCGTCTTTTGTGTTTTGCTACTCCCCATT
TTCTGA--ATTTT-TGCTGGATCAA--TTTTTTGCTGGAACCATTCAAA-GAGAGAGAAAAAGGAGGCTGTGAATGGCGT
GGAGGGAGATGCAAACATAAT--TTT-TTT-TGCTACAACCAGCATCCTAGGA-AGCTTCAATCGAAGGCGAT--GAATT
TTGAGGACCGGCCACACCACGCAACCGCAAAAGCTGGAACCGTCGCCAAAAAAAGCTTCAACCGTTTTG-----------
------TGAAAAAGCTTCAATGGGTGTGAGAAAAAAGTTGCAGCCGACGGCATGGCGGTAT-------------------
GGCGACCGACGGCGAGCTGGTGATGCTTCAAGACAGGCCTCAAAGCGTCCATGGCGGTGTCCGGCGGGTATCCAGGGCAA
AAAGTTGGATGCAA-TTTTTTAGCAAAAGAAAG-C-GATGCA-AAAAAGGTTGATCTGAC--GATTGGTAAAAAGATAAA
CTGACGTGTCAGATGTGACCGGCCGAACCGTCCGGCCGGTGCA-------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr1D_39
--------------------------------------ATTTTTGCTACCACCGTCTTT-GT-TTTCGCTACTCCCCCAT
TTTTGA--TTTTT-TGCTGGATCGAT--TTTTTGTTGGAACCACTCAAA-GAGAGAGAGAAAGGAGGCTGTGAATGGCAT
GGAGGGAGGTGCAAACATTACA--AAAAAA-TGCTACAACCACCGTCCTAGGA-AGCTTCGATCGAAGGCGAG--GAATT
TTGTGGACTGAC--CACCACGCAACCGCGAAAGTTGGAACCATCGACGAAAAAAGCTTCAACCGTTTTG-----------
------TGAAAAAGCTTCAATGGGCGTGAGAAAAA-GCTGCAGCCGACGACATGGCGGTGCGGCGACCGATGGCGAGGAC
GGCGACCTGCGGCGAGCTGGTGATGCTTCAAGGCGGGCCTCGGAGCATCCATTACGG----------GTGTCCAGGAAGA
ACAGCTGGCTGCGA-ATTTTTTAGCACAAAAAA---GATGC---AAAAGACTGATCTGAT--AGTTGGTAAAAAGATAAA
C--------CAGATGCGACCGGCCGAACCATTCCGCCGGTGCA-------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr4A_639
--------------------------------------------------------------------------------
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-----------------------------------------ACTTTGAGGATAAGAATACGTACAATATATGTCATTAAT
TACCAAATTATTATTCTACTTCAACTATTGTGAACAAAAGTTAACTAAAAACGGACACCACCTTTTAGTACTTGGTCATG
ATATCTTATGGATGCACTTAGATGTCTTTGTCTAGAAGTCTAGATATGGCACGTCA--TTTCATATCCTTTGGACTTTAT
GTGTTGTCACTCTGGCTTTCAATTGGGACCGCCTATTGGTAC--TTGGTAATCTTATCTTGTGGATGCACCTTTATATGT
CTTTT--------TCTAGAAGTTCTGAGTTGCCACGTAATTTCATATCCTTTTGACATTATATATTGTCCCTCTGGCTCT
TGCTGGAATGTATACTGAAAGAATGGACAGAAGGTCTGTCATCGCTTGTTTTCTGGTGATGCTTGTGTTGTTCGAAAGCG
CATCTGCAGGTGTGTTCTCACATTTGCTGTTCTTAATTAAGTAGAGTTCCTTCTCTATTAAAAAAAAGTAGAGTTCCTAG
AGTAGATGTTATTTCAAAAGAATAACCTTGAAAAATCTACATAAGATTTCTAGTCGTATTACCAAGAGTTTTCTCAAATA
TTATGTTGATACAGATTGTGTGGATGTCCCTGAGGGTTTTCGCATCGTACCGCTTTTATGCAGCGTTGGAAAAATCATGT
GTTACAATCAATGTCTCACTATTATGGTATTAATTTTCATTGGTTTGTGATGCGCAGACTGTGAGGATGTTCAATTTCAG
ATCTTGTTCTGCATCAAATCATCATGCGAGGATATATGCAAGTTTCAGTGGAAGGGTAAGAAGGTCTACAACCCTTGGTG
CGATAAGTTCTTCGGTGGCTACTGCCACTGCAAGATTTGCCATGATTAATAGAACTTAATGGATATGTTAGGCGCACTTC
ATGCTAGAAATAAATAATTCATAACTTTGTGTCCTGGATCACTGATTTATGCATGGGATTGTATGCTTGGCAGCGCATCA
TGCCATGTGAGACATA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ATCTATA
CTAAAAGGGTTGGGCACGCTATATGCTGCGCCGTCGGTGTTGTTGGTTTCCAAAAA----AAAAAACAA---TACTCACC
ATGTTTCAAAATATAAGGTGTATTAATTTTTCGAAAAGCCCAACC------TTTTAAGTTTGATCAAATTTGTAGAGAAA
TATATCAAAATTCATAGTATCAAATCGGTATGATTAGATTCATCTTGAAATGAGTTTTC----AT-AC--CTTTTGTTTT
GTATTATGGATGTCGATATTTTTTGCTCCGAGCTTGGTCAAAGTTAAAAAAGTA--ACTTTCCAAAAAAGTAATGCCCCT
TA---------TATTGTGGAGCTGGTGGAATATTTAGTTTGGCCAGTGGG-------------GGAGATGATGGAGTGTG
TG-T---------TTTTTTATGCCGTGATTTGATGGGCCTTTC---------------ATGTTATCCGCTAACC-AACAT
ATATTTATGTGGGAAAATTTCTGTGTCAGTGCCTCCATATACTATATTGATGCTACAATATCACATGGTGGCACTT-CTT
TTTTTGGATGATGGGAGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr5B_639
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------ACTTTGAGGATAAGAATACGTATAATATATGTCATTAAT
TACCAAATTATTATTGTACTTCAACTATTGTGAACAAAAGTTAACCAAAAACGGAGACCACCTTTTAATACTTGGTCATG
ATATCTTATGGATGCACTTAGATGTCTTTGTCTAGAAGTCTAGATATGGCACGTCATTTTTCATATCCTTTGGACTTTAT
GTGTTATCACTCTTGCTTTCAATTGGGACCGCCTATTAGTACACTTGGTAATCTTATCTTGTGGATGCACCTTTATATAT
CTTTTATCAAAAATCTAGAAGTTCTCAGTTGCCACGCAATTCCATATCCTTTTGACATTATATATTGTCCCT-TGGCTCT
TGTTGGAATGTATACTGGAAG-ATGGACAGAAGGTCTGTCATCGCTTGTTTTCTGGTGATGCTTGTGTTGTTCGAAAGCG
CATCTGCAGGTGTGTTCTCACATTTGTTGTTCTTAATTAAGTAGAGTTACTTCTCTC-TAAAAAAAAGTAGAGTCCCTAG
AGTAGATGTTATTTCAAAAGAATAACCTTGAAATATCTACATAAGATTTCAAGTCGTATTACCAATAGTTTTCTCAAATA
TGATGTTAATACAGATTGCGTGCATGTCCTTGAGGCTTTTCGCATCGTACCGCTTTTATGCAGCGTTGGAAAAATCATGT
GTTACAATCAATGTCTCATTATTATGGTATTAATTTTCATTGGTTTGTGATGCGCAGACTGTGAGGATGTTCAATTTCAG
ATCTTGTTCTGCGTCCAATCATCATGTGAGGATATATGCAAGTATCAGTGGAAGGGTAAGAAGGTCTACAAGCCTTGGTG
CGATAAGTTCTTCGGTGGCTACTGCCACTGCAAGATTTGCCATGATGAATAGAACTTAATGGATATGTTAGGCGCACTTC
ATGCTAGAAATAAATAATGCATAACTTTGTGTCCTGAACCACTGATTTATGCATGCGATTGTATGCTTGGGAGAGCGTCA
TGCCATGTGAGACATAGGCCTTGTTTAGATACTCTAACTTAGCTAGAGGTTAGAGTTAGTTTCTAGCTCATGACTAACCC
TGAACTAACTCTAGCCAAAGAGTTGTTTGGATGACAGGGTTAGATTGATAATAAATGCACTTTCTCAATCATTTGGCTCA
TTTAAACCCACTTTAAAGGGGAGAGATCTGGTGTGGGGGATAGAGAGATAAAAAGTGTTTTTTTAGTGGGCCCCATGAGA
ACTAGCTCCAATTAGCAACTCTTGGTGGGATAGTTTTTCGGGTGGGTTCGATGCAACTAGCTCAAACTAGCCCTCATGTT
TGGATACTTTAGGGCTATTTGAGCTCAAACTAGCTCAAACAAACTCTAACCCATGGATCCAAACATGGCCATAATCTATA
CTAGAAGGGTTGG--ACATGCTATGCTGGATCGTTGGTGTTGTTGGGTTTCCGGTTTCCCAAAAAACAT---TACTCACC
ATCTTTCAAAATATAAGGTGTATTTTTTTTTTGAAAAGTCCAACA------TTTTAAGTTCGATCAAATTTGTAGAGAAA
TATATCAAAATTCATAGTATCAAATTGGTATGATTAGATTCATCTTGAAATGAATTTCC----AT-AC--TTTTTGTTTA
ATATTATGGATGTCGATATTTTTTCCTCTGAGCTTGGTCAAAGTTAAAAAAAGA-----TCCCAAAAAAGTAATACCCCT
TA---------TATTTTGAAACTGGTGGAATATTTAGTTTGGCCGGTGTG-------------GGAGATGATGGAGTGTG
TG-TT--------TTCTTTATGCGGTGATTTGATGGGCCTTTC---------------GTGTTATCCGCTAACC-AATGT
ATATTTATGTGAGGAAACTTCTGTGTCACTGGCTCCATGTACTATATTGGTGCTACAATATCACATGGTGGCACTT-CTT
TTTCTAGGCGGTGGGAGGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr1A_1637
TAATTAACTAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----AAGGTTAG--GTGCGCTTTGCAGTGCTGTTGGTGTTGTTGGGTTTC-T-------TAAACAAAT---TACTCACT
CTGTTTCAGAATATAAAGTGTATTACTTTTTTAAAAAGTCAAACC------TTTTAAGTTTGATCAAATTTGTAGAGAAA
T---TCAAAATTCATAATATCAAATTGGTATTATTAGATTCATCATCAAATGAATTTCC--ATAT--T--TTTTTGTTTA
ATATGGTGGATGTCGATATTTTTTGCTCTGAACTTGGTCAAAGTTAAAAAAAATCGACTTTCCAAAAAACTAATACCCCA
TA---------TATTTTGGAACTGATGGAATATTTAGTTTGACAGGTGGG-------------GGAGATATTGGAGTGTG
TTTT-ATTT-TTATTTATAATGCA--GATTCGATGGGCCTTTTACGGTGTGGT--TCTGTGGTATCCGCTAACC-AACGT
ATATTTGTGTGGAGAAATTTTTACGCCGGTGGCTGCATGTACTATATTGGTGCTACACTATCAGATGGTGACACTT-CTT
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr2D_1644
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------TA
CTGGAAGGGTTGG--ACGCGCTTTGCTGCGCCGTTGGTGTTGTTGGGTTTC-T-------TAAAAATAA---TACTCACT
TTGTTTCAAAATATAAGGTATATTACTTTTTTGAAATGCC-AAAC------CTTTTAGTTTGATCAAATTTGTAGAGAAA
TATATATAAATCCATAATATCAAATCGGTATGATTAGATTCATCATGAAATGAATTTTC--ATAC--T--TTTTTGTTTA
ATATTGTGGATATCGATATTTTTTGCTCTGAACTTTGTCAAAGTTAAAGAGATTCGACTTTCCAAAAAGCTTACACCCCT
TA---------TATTTTGGAACTGGTGAAATATTTAGTTTGGCCAGCGGC-------------GGAGATGATGGAGTGTG
TTTT-ATTT-TTATTTATAATGCGGTGATTTGATGGGCCTT-CATGGTGTGGT--TTGGTGTGATATGCTAACC-AACGT
ATATTTATGTGAGAAAATATCTACGTCGGCGGATGCATGTACTATATTGGTGCTACAGTATCAGATGATGGCGCTT-ATT
TTTTCTAGAAGGTGG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chrUn_1644
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------TA
CTAGAAAGGTTGG--GCGCGCTTTGCTGCGCCGTTGGTGTTGTTGGATGTC-T-------TAAAAA--A---TACTCACC
CTATTTCAATATATAAGGTGTATTATGTTTTTGA------AAACC------ATTTAAGTTTGATCAAATGTGTAGAGAAA
TACATCAAAATCCATAATATGAAATCGGTATGATTAGATTCACTATTACATTAATTTCTATATAT--T--TTTTGGTTTA
AGATTGTGGATGTCAATATTTTTTTATTCGAACTTGGTCAAAGTGAGAGAATCTTGACTTTCCAAAAAACCAATA-GCCC
TTATATTTTGGTATTTTGGAAGTGATGGAATATTTAGTTTGGCTTGTGTGTGTGTGAGAAGGGGGGGGTGATGGAGTGTG
TTTT-ATTTGTTATTTATAATGCGGTGATTTGATGGGACTTTCGTGGTGTGGTCCTGTGAGTTATCCGCTAACC-AACAT
ATATTTATGTTGGGTAATTTCTGCGTTGGTGGCTGCATGTACTATATTGGTGCTACAATATCACATGGTGGCG--T-TTT
TTTCTAGGTGGTGGGAGGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr4A_1645
------ACTAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----AAGGTTTG--GCGCGCTTTGTTGCGCCATTGGTGTTGTTAGGTTTC-T-------AAGAAACAT---TACTCACT
CTG-TTTCAAATATAAGGTGTATTACATTTTTAAAAAGTCAAATA------TTTTAAGTTTGATCAAATTTGTAGAGAAA
TATATCAAAATCCATAATATCAAATCAGTATAATTAGATTAATCATGAAATGGATTTCC----AT--T--TTTTTGTTTA
ATATTGTGGATGTTGACATTTTTGGCTCTAAACTTAGTCAAAGTTAAAGAAT-TTGACTTTTCAAAAAACTAATA-CCCT
TA---------TATTTTGGAATTGATGGAATATTTAGTTTGGCGGGGCGG-------------AGAGATGGAGTG-----
-G-TT--------TTTTTTATTCGATGATTTGGTGGGCCTTTCTCGATGAGGT--TCTGTGTTATCCGCTAAGA-AACCC
ATATGTATGTGGGGAAATATCTGTGTGAGTAGCTGCATGTACTATATTGGTGCCACGGTATCACATGATGGCATTTCTTT
TTTCTAGGTGGTAGGAGGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr7D_1645
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
CTAGAGGGGTTGG--ACGCGTTTTGCTGCGCCGTTGGTGTTGTTGGGTTTC-T-------TAGAAACAT---TACTCACT
CTG-TTTCAAATATAAGGTGTATTACATTTTAAA------AAGTCAAACATTTTTAAGTTTGATCAAATTTGTAGAGAAA
TATATCAAAATCCATAATACCAAATCGATATAATTAGATACATCATGAAATGAATTTCC----AT-AT--TTTTTGTTTA
ATATTGTAAATGTTGACATTTTTGGCTCTAAAGTTGGTCAAAGTTAAATGAATTTGACTTTGCAAAAAGCTAATA-CCCT
TA---------TATTTTGGAATTGATGGAATATTTAGTTTGGCGGGGCGG-------------GGAGATGATGGAGTGTT
C--TT--------TTTATAGTTCGATGATTTGGTGGGCCTTTCTCGATGTGAT--TCTGTGTTATTTGCTAAGAAAACCC
ATATTTATGTGGGGAAATTTCTATGTCGGTAGCTGCATGTACTATATTGGTGGTACAGTATCACATGGTGGCATTT-TTT
TCTCTAGGTGGTAGGAGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr6D_1645
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
CTAGAAGGGTTGG--GCGCGTTTTGCTGCACCATTGATGTTGTTGAGTTTC-T-------TACAAA--A---CACTCACT
CTATTTCAAAATAAAGG------TACTTTTTTGAAAAGTCAAACC------TTTTAAGTTTGATCAAATTTATAGAGAAG
TATATCAAAATCCACAATATCAAATCGGTATGATTAGATTCATCATTAAATGAATTTTC----ATTAT--TTTTTCTTTA
ATATTGTGGATGTCGATATTTTTTGCTCTCAACTTGGTCAAAGTTAAAGAAATTTGACTTTCCAAAAAACTAATACCCCT
TA---------TATTTTGAAACTGATGGAATATTTAGTTTGGCCGGTGGG-------------GGAGATGATGGAGTGTG
TTTTT--------TTTATAATGCAATGATTTGATGGGACTTTTGTGGTGTGGT--ACTGTGTTATCAGCTAACC-AATGT
ATATTTATGTTGGAAAATTTCTGTGTCGGTGGTTGTATGTACTACATTTGTGCTACAATATCACATGGTGGCGCTT-CTT
TTTCTAGGTGGCGGGAGGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr7D_1652
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------AGGTTGG--GCGCGCTTTGCTGCGCAGTCGGTGTTATTGAATTCC-T-------TAAAGC--AAACTAATCACT
CTTTTTTAAAATATAAGGTGTATTACTTTTTTGAAAAGTTAAACC------TTCTAAGTTTGATTGAATTTGCGGAGAAA
TATATCAAAATCTATAATATCAAATCGGTATGATTAGATTCATCATGAAATGAATTTCC----AT-ACTTCTTTTGTTTA
ATATTGTGTCTCTCGATAATGTT-GCTCCGAGCTTGGTCAAAGTTAGAGAAATTTGACTTTTCAAAAA-CTAATACCCCT
TA---------AATTTTGGAACTGGTGGAATATTTAGT--GGCGGGTGGG-------------AGAGATGATGGAGTTTG
TTTTAATTT-TTATTTATAATGTGGTGATTTGATGGGCCTTTCATGGTGTGGT--TCTGTGTTATCCATTAACC-AACAT
ATATTTATATGGGCAAATTTCTGCGTTGGTGGTTGCATGTACTATATTGGTGCTACAATATCACATGGTGGAGCTT-CTA
TTTCTAGGTGGTGGGAGGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr5A_1664
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------CTTTGCCGCGTCATCGGTGTTGTTGGGTTTC-T-------TAAAAA--AAA--AGTCACA
CTGTTTTAAAATATAAGGTGTACTAC-TTTTTTAAAAGTCAAATC------TTTTAAATTTGATCAAATTTGTAGACAGA
TAAATCAAAATCCATAATATCGAATCGATCTTTTTAGATTCATCATGAAATGATTTTCC----AT-ACTTATTTTGTTTA
ATATTGTGGACGTGGATATTTTTGCGG-TGAACTTGGTCAAAGTTAAAGAAATTTGACTTTCCAAAAATCTATTACCCTT
TA---------TATTTTGGAACAGATGAAATATTTAGTTTGGTGGGTGGG-------------GTAAATGATATAGTGTG
TTTTATTTT--TATTTATAATGCAGAGATTTTGTGGACCTTTCGTGGTGTGAC--TCCGAGTTATCCGCTAACC-AGCCT
ATATTTATGTGGGGAAATTTTTATGTGGGTGGTTGCATGTACTATATTGGTGCTACAATATCACATGGTGGCGCTT-CTT
TTTCTAGGTGGTGGGAGGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>SNPs
------------------S-------S-----------------------------------------------------
--------------------------------------------------------------------S-----------
------S---------------------------------------------------------------S---------
----------------------S---------------------------------------------------------
-----------------------------------------------------S-----------------------S--
------S--S---------------------------------------------------------SSSS-SS------
---------------------S--S-----S-----------------------------SS------S-----------
----------------------S--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---S--------------S----------------
---------------------S-----------------------------S----------------------------
-------------------S---S----S----------------------------------------------S----
---------------------S----------S-----------------------------------------------
--------------------------------------------------------------------------------
---S--------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-------------------------------------------S----------------
------S-------S-----------------------------------------------------------------
-----------------------------------------------------------------------S--------
S----------------------------------------------S--------------------------------
-----------------S-----------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-------------S------------------------------------------------------------
--------------S------------S----------------------------------------------------
--------------------------------------------------------------------------------
---------------S-------------------------------------------------------------S--
-------------------------------------------------------------------S---S--------
-----------------------------------------------------------------------------S--
-----------------------------S------------------------------------S----S--------
--------------SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_618
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GTGCATGCGTACAAGCCAAG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_2878
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------GTC
AGCTGTTCAGGGGCTAG---------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
