>input_sequence_76075
--------------------------------------------------------------------------------
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--------AATTCCTACCATTCCAGCATTTCGTCGTAGCTATTAAGCAAGGAGCCACATACCAATGTCTCATACTTGTAT
GCTTTACTTCGAAGCCCACCAACACCACGCCAAATTTCAGGACAACCATGCCAGTGTTATGAAGAAAGAAGAAGCAGCAG
TAGGAGCAAAGCATGTTCAAGCCCACAAAAAACAAGTCAAATTTCAGGACAACCATGCCAATGATATCAACATAGATGAT
GTGAGTAAGGATGTGGATACAGTGGCTTTGGACTTCATCAACCGTAAGCACACGTCCTGGGCACTCCAGAAGAGCACAAC
CATGTATCCAGCTTCTTAAGCGCACCATGGTTGCTTAGTCATGGTACTATCTGCTCATGCTTTGTCCACTATGAAAGTTA
GAATAAGAGGTGATGCTTGGCGGTAACCTAAATATTCCTAAGTAGTGGTACTATCTACTA-TGGTGTTGTTACTTGCAAT
ATAAATAGAAGCGAAGTGAA-TATGTTGTACTGTTATTTGCAACATCGATGTATGGTGTTCTTATATATGAATGTC----
-AGGTTATTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>chr3D_1_TraesCS3D01G531300
CCAAAATCCAAGCACTTATAGGCTTATAAGACACAATCGCATGTCGTGTGCGTTGTACCATGTTTTTTCGTTGTTTTTGG
CAGGGAAAATACTTGTATTACCTAACAAGTAGGCTTACAATCAGTTTCACA-AATTATATGACCTTATCAGGTCCTGATC
CTTACCAAACAGCGATACGGCTTTGAACCCTGCCAGAACTAGCCATGAAGTGGCTTACATTATTTTGA------------
--------------------------------------------------------------------------------
------AGTGGTTAGGTCCCTTTGAGGTTGCAGGATATTACTATTCCGGCACATGAAAAGTGGACGAAAGAACATGAAAA
GCATACAG--------TTCTTTTTGACAAATCGAAAGATGATAGATTGAGAATCATATGCGGAGGCAAGGAGCAATGGTG
G-TAGCTTTTTATTGCAAGAAAACATGTATAATAGCTGTAGCACCTATACACTAGAGCACAGTTTTAAATTCATGTGCGC
CTTTGGGAAAAAGTAACGCCTTGAAAGCAGTTCAATAGCAATTCTAATACGTGCCCTTTTAGAATAAAGAAAATCAAGTT
AATATTTCCAGTTGTTTGATGCATGCATGGACTAAATATAGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GAAATCAGCAAAGTTATTGAAGCCAGATGACCTGCTTGGCACTT
GTTTTGTTAATCACAATTAACCAAAAGTGTATATAATATACAAGTGTCGTAACTGTTTAATGTTCCATGCTAGAATATGA
C-------AGTGCTTATCTTTTATCAGCGGAAGGGGAAACCAAC--CCAATGCTTCCTACTAAAAAGAAGAGAAGAAACT
GCAGAAGGAACTAATCTTAGGTCCATTATAAGTTAGAACCGTAGCTAGCC--AAACTACATAGAAGATAAAGATTGATTC
ATTCAGCGCCGAAGAATTTTGAATGAAGAAAGCTAACAAGAAAGATTCG-----------CTCAAAATAGTCAAAAGT-G
AGAATATGATACCCACTCGCCGCTCAAGAATAAGCATCCTCATTGGCCTATAAAAGAGGACAAGAAATAATCACA---GC
TGCAAACCAATTCCTACCATTCCAGCATTTCGTCGTAGCTATTAAGCAAGGAGCCACATACCAATGTCTCATACTTGTAT
GCTTTACTTCGAAGCCCACCAACACCACGCCAAATTTCAGGACAACCATGCCAGTGTTATGAAGAAAGAAGAAGCAGCAG
TAGGAGCAAAGCATGTTCAAGCCCACAAAAAACAAGTCAAATTTCAGGACAACCATGCCAATGATATCAACATAGATGAT
GTGAGTAAGGATGTGGATACAGTGGCTTTGGACTTCATCAACCGTAAGCACACGTCCTGGGCACTCCAGAAGAGCACAAC
CATGTATCCAGCTTCTTAAGCGCACCATGGTTGCTTAGTCATGGTACTATCTGCTCATGCTTTGTCCACTATGAAAGTTA
GAATAAGAGGTGATGCTTGGCGGTAACCTAAATATTCCTAAGTAGTGGTACTATCTACTA-TGGTGTTGTTACTTGCAAT
ATAAATAGAAGCGAAGTGAA-TATGTTGTACTGTTATTTGCAACATCGATGTATGGTGTTCTTATATATGAATGTC----
-AGGTTATTACAATGATGCTGTTCAACTTGTGAAAGGATACACATTCCATGGCATAATGGTCTTTCATTGACAATGAATT
TAAGTTGGGCAAACGATGGACTCCCTTGACGGACAATTTGTCACAAACATCCCCTAAGATGGAAACACTGATGCCAACCT
ACACTGTCTTGCCTTAAAAAATTCAACAAAATCCATTACAATTCCACCTCAGTACCACTCCCTCTGTTTCTAAATATAAG
CCCTTTTAGAGATTTCAATAGGAACTACGTACGGATGTATATAGGCATACTTTAGAGTGTACACTCATTTTACTCCATAT
GTAGTCCATATTGAAGTCTCTGAAGGCTTATATTTAGGAGCGGCGAGAGTAGATTATAGCAGCTTA----------AAAA
ATCATGCCGATAGGATAAATTTGACATGACGGCTG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------CAGTAGAAGCACCTCTAGGATACCTCTCAGTTCTCATGAGCTCAAAGATAAGTGTAGACAAAGG
AGGTTTCCAGCACTTTTTG-ATTTCTCTGACTAAAATAAAGGTTGCGACGGTTATCTAGG---------------ACTAC
TACCTTGATTTTAGCAAGACTCATTCAGTATCAGCATAAGTGCCAAGAACGTGGCGACATAGCAACTAAGTGATCAACTG
CAGCAATTAGAAACTAACCAGAACTATCACTTATATGAATACAGAGGTTTTTCGTTAAAAAGTAATGTTAATTATTTTAT
GTCATGTTCCAGCAATTCTTATTCAGTATCT------------------------TTAACACCCTAGTATGATTACTCAA
TGGCCATCGTATCTATTAGTACTCATATTAGTTCTATCATAAGTCAAACTTTTAAAATTTGACCAAGTTTATAGGGAAAT
ATTAAACATGTATAATACCAAATAAATACAATACGGAAACATATTTCACATAACATATCTATTGATGAAAATTTGATTGT
TTAGAAGTTGATGTTTCTCGATATGCCTTATATTTTAGAAAGTAGGGAATACTATTCTTTCCTGGAAGAGAGAAAGATCT
TT
>chr3A_108
--------------------------------------------------------------------------------
---------------------------AGTAGGGTTACGATCTGTTTCATAGAATTTTATGACCTTATCAGGTCCTGATC
CTACCAAAACAGCGATACGGCTTTGAACCCTACCAGAACTAGCCATGAAGTGGCTTACATTATTTTGATTGCGACACACA
TGAGTATTATTAGCATTTGGTTCATCTAGTTTCCGTTTAATCTGCCGGATCAAGAAAGAGTTTCCCAGATCAAGAAAAAC
GGAAGCAGTGGTTAGGTCCCTTTGTGATTGCCGAATATTACTATTTAGGCATATGAAAAGTGGACGAAAGAACATGAAAA
GCATCCAGTTCTTTACTTCTTTTTGAGAAATGGAAAGATGATAGATTGAGAATCATATGCGGAGGAAAGGAGCAATGGTC
GATAGCTTTTTCTTGCTAGAAAACATGTATAATATTTGAAGCATCTATAGGACAGAGCACAGTTTTAAATTCCTGTGCAC
CATTGGGAAAAAGTAATTCCTTCAAATCAGTTCAATAGGAAATAAAATACACGCCCTTTCGGAATAAAGAAAATCAAGTT
AATATTTCCAATTGTTTGATGGATGCATGGACTAAATATAGTAACAATTTTGCAGCTCAGAGGAACTGTGGACAAGGATG
AAATTTAACTATAGTGAAGACTGGACTTTCAGCTCCCGGGTGCAGGGGCACCCTAATGAACAGTAAATGAAAAACAATAT
GAAAAAAAATAGAAAAATTCTGAAACTTTGGGGGATCAAATATGATCAAACATTCGATGTTCATGCAAAGTTTTAGCATC
AAAAAACATTCATGGAGCCTTCACAAAAAAATCAGTGTTCAAAGTTATGTGTAGTTTTGAGCAGTAATTTCTGCTCGAGT
GTTATTTCTGGCTTAAAATTTGCAAGAACATCAAAATTTTGATCATATTTGATCCCCCAAAATTTCAGATTTTTTTAATC
TTTTTTTCATATTGTTTTCAAGTTATACAGGATATTGAAATCAGCACAGTTATAGAAGCCAGATAACCTTATTGGCACTT
TTTCTGCTAATCAGAATTAACCAAAAGTGTAG--AATATACAAGTCTCGTAACTGT-------TCCATGCCAGAATATGA
ATGAAGATAGTGCTTATCTTTTATCAGCGGTAGGGGAAAACAAC--CCAACGCTCCCAACTAAAAAGAAGAGAAGAAACT
GCAGAAGGAACTAATCTTAGGTCCAATATAAGTTAGAACCTT-----GCC--AAATAACTTCGAAGATAAACATGGATCC
ATTCAGTGCCTAACAATTTTGAATGAAGAATGCTAAGATGAAAGATTCG-----------CTCAAAATTGTCAAAAGT-G
AGAATATGATACCCACTTGCCGCTTAAGAATAAGCATCCTCATTGGCCTATAAAAGAGGACAAGAAAACATCACACTTGC
TGCAAACCAATTCCTACCCTTCCAGCATTTCCTCGTAGCTCTTAAGCAAGGAGCCATAGACCAATGTCTCATACTTGTAT
GCTTTACTTCGAAGCCCACCAACACCATGCCAAATTTCAGGACAACCATGCCAGTGTTATGAGGAAAGAAGAAGCAGCAG
TAGGAGCAAAGCATGTTGAAGCCAACAAAAAACAAGTCAAATTTCAGGACAGCCATGCCAATGATATCAAGATAGATGAT
GTGAGTAAGGATGTGGATACAGTGGCTTTGGACTTCATCAACCGTAAGCACACGTCCTGGGCACTCCAGAAGAGCACAAC
CATGTATCCAGCTTCCTAAGTGCACCAGGGTTGCTTAGTCATGGTACTATCTGCTCATGCTTTGTCCAGTATGAAAGTTA
GAATAAGAGGTGATGCTTGGAGGTAACCTAAATATTCCGAAGTAGTGGTACTATCTACTA-TGGTGTTGTTACTTGCAAT
ATCAATAGAAGTGAAGTGAA-TATGTTGTACTGTTATTGGCAATACCGATGCATAGCATTCTTATATATGAATGTC----
-AGGTTATTACAATGATGCCGTTCAATTTGTCAAGGGATACACATTCTGTGGCATAGTGGTCTTTCATTGACCATGAATT
TAAGTGGGGCAAACGATAGACTCCCATGACGGAGAATTTGTCACAAACTTCCCCTATGATGGAAACACTGATGCCAACCT
ACACTGTCTTGCCTTAAAAAATTCAACAATATCCCTTACAATTCCACCACAGTACTGCTCCCTCCGTTTCTAAATATAAG
CCCTTTTCGATATTTCCATAGGAACTACATACGGATGTATATAGGCGTACTTTAGAGTGTACACTCATTTTACTCCATAT
CTAGTCCATATTGAAATCTCTGGAGGCCTATTTTTAGGAATGGTGGGAGTAGATTATAGCAGCTTATAACATATAAAAAT
ATTATGCTGATAGGATAAATTTGACAAGAAGGCTGCAGTAAAAAATGAGACCTTTTACAGTACATCAGATCAATATTGGC
CGTTTATTTTTGTGTTTGGACGGCTCAGATTTGAAAATACTACTGCAGATTTTCGGTAGTATATTTTGTGATCAGGGGCA
GTTTCGGTACTGTTAGCAAAAACGTGGGCTGGCTCCCTAAAAAAACGAGTGACCGGCATTGCGGAATTTCGACTATCCAT
TCACCATCACCACCATACGCACCCCCGCGGCCCATCCTCTTAATGGACACAGCGGATACCTCGAAAAAGAAATACGACCA
CTAGTGGCGCTAGGGCGAGAGGACGACGGCAGCCTCTAGTCGCCGTGACAGCTCTCCACACAGTCTATGCGAACGCTAGG
GCTTCGCGCTCCGCCGTAGGCCGTATGAGCCGGCACTGCGGCATCGGCCCCCTCCTATCCTAGGCGGCAGCTATCGTCGG
CGAGAACACTGCGACAAGAAGGAATTAATTCACGCAATAACAGCATTATAGATTAGTTGCCTCCTGCATGCAGCGTCAAA
GCGAACCTCCGGCGTTCTAGTAGTTTGGATATGCAGTGACCATGGCATGCACTGCCATGAGCATGCATCGCCGCACTAAA
GAGAAGAATTAGTTGAGAGATGAAAGAGGGCTCATTTGAAAAGGAGGACATTGCTTGCGCTAAGAGCATCTTCAATAGGC
GCCGAACGCGCCGCGCGCAAAAACAGCTTATAGCGCACGCCCATCGCCTGGTTTGGCGCGGCGTGCAGTGCTGGCTCCAA
CAGCCGCGCTAAAATGCAGCGCGCGCGCCGTTCCAGCAGTGCGCAAAAATGCAGCGCACGCGACACTCGCACAAACAACA
TATGCATTCGAAAACAGAAGCAAAAAGATCAAAACAAACAAAAATAAATAGTTCAACTTCATTTATTACAACTCAAACAA
ACAGTTTATCGTTCAATACAACAAATAGTGCAATTAAACACAACAAATAGTTCAACAATACAATAATGAACGCACAAATC
ATGATGCTCTTTGTCGTCCATTCCATGCCCACCACTCCTCAATGAGATCCTTCTGAAGATCATTATGCGTTGCGGGACGT
CGAATGGCATGATAGGAGGCAACAAAACGGGCCACCCTTTCAGCCCTCCGTCGCACTCGCACGGGATATCCCAAGAGCTC
ATACTGAGAGTAGTCTACATCTTGGCCACGCTCATTCTCGATGGTCATATCGTGCATGATCACACAAGCATGCATTATGT
ACCAAAACATCTTCTGATCCCAAAATCTAGCCGGTCCTCTCACAATAACAAATTGGGCTTGCAAAATCCCAAAAGCTCTC
TCCACATCTTTTCTAGCCGCCGCCTGAGCATTGTGGAAATCAAGTTCTTTCTTACCTTCTGGCTTTTTCAACGACTTGAC
AAAGGTTTGCCACTTTGGATAGATGCCATCCGCTAGATAATAGCCATAGTTGTATGTACGGCCATTTGCTACAAACTGCA
CCGGTGGCAACTCCCCCTTTGCAATCTTACTCATCAGTGGTGACCGGTTGACAACATTGATGTCATTCACAGATCCAGGC
ATTCCAAAGAATGCATGCCAAATTCAGGTCTCTTGATCGGCCACCGCTTCAAGGATTATAGTGGAACCCTTTTTTTGGTC
GTGGAATTGCCCATGACATGCCTTTGGACAATTCTTCCAACTCCAATGCATGCAATCTATTGAGCCAAGCATGCCAGGAA
AGCCGCGAGCTTTGTTCATCGCCAAAAGCCTTGCGACGTCTTCAGCGTTGGGAGATCTCAAATACTCCTCGCCAAACACT
TGCACAATTCCGATTGCGAAGCTCTTGACACACATGATGGCTTGGCTCTCACCCATAGCCAAGTGATCATCAACTAGATC
AGCCGGTATACCGTATGCCAACATACGCAAAGTGGTTGTCACCTTCTGAAAGGTGCTATGCCCGAGCTCTTCGGCGGCAT
TCCTCCTTTGCTGAAAAAAGCGGTCATGGCTCGCTAGTTTCTCTGCAATGCGCCTGAACAACTCGGTGCTCATCCTAAAC
CGGCGACGAAAATACGACTCGGGGTATGTGAGATTCTCCGCAAAATAATGCCTGATCAATCTGTTGTGGGCATCGATCCT
ATCCCTCCAAATTTTCTGCCGACCCATAACCGAACCACCGTGCTTCGGTTTTTTATTAATATGCATAGCTAGGATCATTG
CAAGATCCTCCTCCTCTTCCATATCAAATTCTTCTTCGGAAGAATCATACGACGAGCTCATCTACAATGTTGAATACTAT
GCTATAAATAAAAAACTACAATCAACATGCACGAAAATCGTGGCTTTTGAGCAATACATACCTTCTAGGTGTTTTGTCGA
ACACCTTGCGGGCGCCGAGCGGCAGCGAGCGCGCGGGCGCTGTTCGTCGGAGGACCAGCTAGCGCCCGCGGGACTAGAGG
GGGGGGGGGCAGAGAAAGCGCGCGCGGGCGGGGATAGGCCGGGGAAGCGCCGGAACGGTCGCCGGGTGGCGCGGTCGGCG
GCGGCTGGATGAGGGGATGGGACGTGCGAGCGAGCGCGCGAGAGTCCAGCGCGCGGGAGCGGGCGCAGCAAATAAGCGGC
GCATGATTGAGTTTCGGCCCGCGCGCTGGACTACGTATGCCACGCGCGCTGTTTTCGCGCGCCCGCTGGAGCAACTATTC
CAGTTACGCGCGCGCTAAAACGGGAAATTTTGCGGCACGGCGCTAGTTTGGCGCGCCTGTTGGAGATGCTCTAATGAGAG
ACGACGTGCCGAGGAACAGATCTCGAGCGCCGTCCGAAGATCATGCGACGGTGGGCCACCAGCCGGCGCGGAGTAGCTGC
ATTATCTAAGATCTTGGGCAGTAGGCCAGGAGATGGAGTGGCCGCCCCTGTGCGACTAAGGAGACGGCCGTCGGGCTGCT
GGTGTGTCGCCAGCAGAATGACGAACTGCCTGAGAATGAGGGACAAACCTATGAACTAAGATGAGGCACAAGTTTTCTTT
TCACATGTCTGATTGCCTACGTTATTAATCATTACAATCACTCATAGTATTATTAATCATTACAATTAACATTAAGAAAA
GATAAATCTACCTAACATCCAATTACCAAAATGTCCTAGGGAGAAAAAAACATTGAGTAGTACGATATACCGTAAAAAGT
CTCTAAAAATAGGCTACAGTAGAAGCACCTCTAGGGTACCTGTCAGTTCTCATGAACACAACGGTAAGTGTAGACAAAGG
AGGTTTCCAGCCCTTTTTTTATTTCTCTGAATAAAATAAAGGTTGCGACGGTTATCTAGGAGAATACTGATCTTGACTAC
TACCTTGATTTTAGCAAGACTCATTCAGTATCAGCAATAGTGCGAAGAACTTGGCAACATAGGAACTAAGTGATCAACTA
CAGCAATTAGAAACTAACCAGCACTATCACTTATATGAATACAGAAGTTTTTCGTTAAAAAGTAATGTTAGTTATTGTAT
GTCATGTTCCAATAATTCTTATTCAGTATAGCCAGACCTACAATAGAACTTTGCGTTAACACCCTAGTATGACTACTCAA
TGGCCATCATATATATTAGTACTCATATTAGTTCTATTGTAAGTCAAACTTTTAAATTTTGACCTAGTTTATATGGAAAT
ATTAAACATGTATAATA------------AATACAGAAACATATTTCACATAATGTATGGTC-----AAAATTTGATTGT
TTAGAAGTTGATGCTTCTCTATATGCCACCTATTTTAAAAAGTAGGGAGTACTATTCTTTGCTGGCAGAGAGAAAGATCT
TT
>chr3D_607
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--------------------------------------------------------------------TGCTTGGGACTT
GCCTTGTTATTCATGGTTAACAAAAAGTGTAA--AATATATAATCTCCTTAACTGG-------TTCATGCCAGCATATGA
AAGAAGATATTACTTATC-TTTATGAGCGGAAGTGGAAAAACAACTCAACTGCGTCCTATGAAAAAAG--------AACT
GCAGAAGGAACTTAACTTAGGTCCACGCTAAGCGAGAAGCCCTAGCAAGCAAAATTACTTTACAAGATAAACATGGAGTC
ATTCAACGCCTAACAAATTTGAATGAAGAAAGCTAACAAGAAAGAGAACACGAAAAATATCTCAACATTGTCAGCAGTGG
AGAATATGATGCCCACTTGCCGTCTATGAATAAGCATCCTTATGGGCCTATAAAAGAGGACAAGAGCACATCACA---GC
AACAAACCAGTTCCTACCCTTCCAGCATTTCCTCGTACCCCC-AAGCAAGGAGCCATAGAGCAATGTCGCACACTCGTAT
GCTCTACTTCCAAGCCCACCATCCCCATGCCAACTTTCAGGACAACCATGCCAGTGTTATGAAGAAAGAAG---CAGCAG
TAGGGGCGAACCATGTCCAAGCGCCCAAAAAACAAGTCAGGTTTCAGGACAACCATGCCAATCCTATCAAGAAAGATGAT
GTGAATACAGATGTGGATTCGGTGGCTTCGGACTTCATCAAGCGTAAGCACATGTCTTGGGCACTCCAGAAGAGCACGAC
CATGTATCCATCTTCTTAAGAGAACCAGAGTTCCTTAGTCATGGTATTATCTGCTCATGCTTTCTCCAGTATGAAAGTTC
AAATAAGAGGTGCTGCTTGGAAGTGCCCTGGATATCCCGAGGTTGTGTTACTATGGTGTATTGGTGTTCTTATTTGTAAC
ATGAATAAGAGCGATGTGAA-TAGA-TGTACTGTTATT-----CACCGCTGTGTGATATTCTTATATATGAAAGCG----
-TGGTTATTACAGTGATTCTGTTCGACTTGT-------------------------------------------------
--------------------------------------------------------------------------------
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--
>chr3B_704
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------CTTATC-TTTATGAGCGGAAGTGGGAAAACAACTCAACTGCGTCCTATGAAAAAAG--------AACT
GCAGAAGGAACATAACTTAGGTCCACGCTAAGCGAGAAGCCCTAGCAAGCAAAATTACTTTACAAGATAAAGATGGAGTC
ATTCAACGCCTAACAAATTTGAATGAAGAAAGCTAACAAGAAAGAGAACACGAAAAATATCTCAAAATTGTCAGCAGTGG
AGAATATGATGCCCACTTGCCGTCTAAGAATAAGCATCCTTATGGGCCTATAAAAGAGGACAAGAGC-AATCACA---GC
AACAAACCAGTTCCTACCCTTCCAGCATTTCCTCGTACCCCC-ACGCAAGGAGCCACAGAGCAATGTCGCACACTCGAAT
GCTCTACTTTCAAGCCCACCATCCCCATGCCAACTTTCAGGACAACCATGCCAGTGTTATGAAGAAAGAAG---CAGCAG
TAGGAGCGAACCATGTCCAAGCGCCCAAGAAACAAGTCAGGTTTCAGGACAACCATGCCAATCCTATCAAGAAAGATGAC
GTGAACACAGATGTGGATTCGGTGGCTTCGGACTTCATCAAGCGTAAGCACATGTCTTGGGCACTCCAGAAGAGCACAAC
CATGTATCCATCTTCTTAAGAGAACCAAGGTTCCTTAGTCATGGTATTATCTGTTCATGCTCTGCCCAGCATGAAAGTTC
AAATAAGAGGTGCTGCTTGGAGGTGCCCTGGATGTCTCGAGGTTGTGTTAT-------TG-TGGTGTTCTTATTTGTAAC
ATGAATAAGAGTGATGTGAAATAGGCTGTACTGTTATT-----CACCACTGTGTGATATTCTTATATATGAAATGAAAGT
ATGGTTATTACATTGATTCTGTTC--------------------------------------------------------
--------------------------------------------------------------------------------
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--
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS------S----S---S------S------S-----------------------
--SS-S-------------------------S------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-S----S-S-----------SS----S----------------------------
----S---------------------S----S---------------------------------S-------------S
-----------S----S-----------------SS--S----S-----SSSS-------------------S-----S-
-S--------------SS----S---S-----------S--S-SS-----SS-------SS-------------------
----------S----------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S------S----------S---------------
-------------S-----------------SSS-----------S----------SSSSSSS-------S---------
S--------------------------------------S----------------------------------------
-------------------------S--------------S-SSSS---------SS--S--------------S-----
----------S--S------------------------------------------------------S-----------
-----------------S------S------------------------------------------S------------
------------------S------------S--------S-----------------S---------------------
---------------------------S----------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------S------S----------------------------------------S-----------
--------------------S-----------------S-----------------------------------------
--S-----------------------------------S------S-----------S----------------------
-------------------------------S--S------------SS-------S---------------S-------
-----S-----------S-------S-------S--------------S-------S-----------------------
-----------------------------S----S-------------S------SS-------S---------------
-------S--S-----S-----------S-----------------S---------------------------------
S--------------S------S----S---S-------SS--S-S---------------------------------S
--S----S------------------S--S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------S-----S-------------S-S---S-S----------------
-----------S------S-----------S-------------------------------------------------
------------------------------------SS-----S------S----S------S----------------S
---------------------S-----------------------S------------------------S-----S---
-----------SS----------------SS-----------------------------------------S-------
--------S---S------------------------SS-----------------S-------S--------S------
-----------------SSSSSSSSSSSS-----S------------------SS---SSSSSSSSS-------------
-------------S-----S-------SSS-------S----------S-----------S----S--------------
--
>forward_59
---------------------------------------CATGTCGTGTGCGTTGTACC---------------------
--------------------------------------------------------------------------------
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--
>reverse_1861
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------CGCACCATGGTTGCTTAGTC----------------------------------------
--------------------------------------------------------------------------------
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--
>forward_61
-----------------------------------------TGTCGTGTGCGTTGTACCAT-------------------
--------------------------------------------------------------------------------
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--
>reverse_2178
--------------------------------------------------------------------------------
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-----------------GGACTCCCTTGACGGACAAT-------------------------------------------
--------------------------------------------------------------------------------
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--
