>input_sequence_75981
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--------------------------------------------------------------CTATAAATGGAGGCGCTT
CTAGCTCTAGAAAACAACAACT---A---CATCTACA-----CTCCACTCCATAGTCATATGAGATAAGTGATACAATTT
TATGTGAAAGCCGTAGAAGCAACAATGAAGAACATCAAGCTCATGGCAATCCTTGTTCTCCAGGCCATCCTGGTCATGGG
AATCCTCGCACATGTGAATGGTTC----GTTGTTGTTCATGCTTATATATTCTAT-TTCTTCCCTGAAGAAAGTTTGATT
TCTTTTTT--GTGATGTCAATGTGGCCTTATGTATCTTATAAGCCATTAACTAACGTGATGCCATGCCATGAATGCTTGC
AGCCAACTACTTCCCCAAGTGTTGCGACAAATGCAGGTCCTTCTCAGGGGTGGATATCTGTGACGACACCCATCCTCAGT
GCCCCAAGGGCTGCTCCACGTGCCGCCCGGTGCAGACGGGCAGTGTCAAGATGTTCTAGTGCGCCGACATGCGCTCCACC
ATCAATGGCACATGCGGTCCACGCTGC-AAGAAGAACTAATAGGTTCAACCTCGGATCAAGAAATGTGTTTCGCCAAAA-
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>chr1D_1_TraesCS1D01G265500
TGGTGTCGTTTTCCTGCATGAGTGCAATGTGGTACATGCTTT--------------------------------------
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-----------------------------------------------------------------GGGTCTGCTGGACCA
GATGTATGCTCCCGGTACGTCATGCGGATGGCTCGGTGATGACCCAGTTCTAGATGGTGGGGCACGATGGCATCCTCTAT
TGTTGAGTTTGTAGGTGTTGAGTGATGGCTTCGGATTGTTTAATGTATGTCATTGTCAGACCTTTGTTAAATAGTTTAAT
AAAGATGATTGTGTGAATATATTGATAAAGAGGCCCGAGGTTTCAACCTCCTTTTTGAAAAAAATATGAAAATAGCAGCC
GTGTAGACCACATGTAATGTGATACGCCTCCTTTTTAATTAAGGTAGCCCTTTATTCATATCACATAATCATTGCATACA
ATGTCCCAGATGGAACCCGTATCAACACCACAGGTCATATCACATAATCATTGC--------------------------
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------------------------------------------------ATACGTTGGGAGATCATGTTCCAAGAGTTCTT
CACCAAGTATAGACGGAGATAATTTTGAAAGCTTGTAGATGGAGATCATGTAGCAACGAGCTAGGCCTAGATTTGGCTTA
C--AAGTCTAATAATTGCGAATTTTGCATATGTCCATTGAACATGTGGAAAAAATGTGCGTA--GTGGTGCATGTTGTGT
GTCGAACTTTATCATCCTGCTCACCCTATCACCCACTTGATGTCATGCAAGTATCGTTTGACAAATGGTGAATTTTATTA
GCTCAAAATGGATCATCAAAAGGATACAGAAGCAATGAGCACACAACCAGGCACTGCATAGTAAGGATGCACACAGCCAA
CACTAATGCACAAACACGAAAGCTACATCAGATACTAGCAATGTGAAAACAAAGACC-GAAGCAATGCCTTGGTGGAGTA
AAGAAAAATGAAAAACTCTGAGCAATCAAAACAATGATCAACAATCTACAACAACAGCCATATCAGCACCAATCATCTCT
TGACATCAGTTGTGATGTCATGCAGGCACTGCAGATTGCCAGGTAAGGTGCCAAATCTATGCCTATAAATGGAGGCGCTT
CTAGCTCTAGAAAACAACAACT---A---CATCTACA-----CTCCACTCCATAGTCATATGAGATAAGTGATACAATTT
TATGTGAAAGCCGTAGAAGCAACAATGAAGAACATCAAGCTCATGGCAATCCTTGTTCTCCAGGCCATCCTGGTCATGGG
AATCCTCGCACATGTGAATGGTTC----GTTGTTGTTCATGCTTATATATTCTAT-TTCTTCCCTGAAGAAAGTTTGATT
TCTTTTTT--GTGATGTCAATGTGGCCTTATGTATCTTATAAGCCATTAACTAACGTGATGCCATGCCATGAATGCTTGC
AGCCAACTACTTCCCCAAGTGTTGCGACAAATGCAGGTCCTTCTCAGGGGTGGATATCTGTGACGACACCCATCCTCAGT
GCCCCAAGGGCTGCTCCACGTGCCGCCCGGTGCAGACGGGCAGTGTCAAGATGTTCTAGTGCGCCGACATGCGCTCCACC
ATCAATGGCACATGCGGTCCACGCTGC-AAGAAGAACTAATAGGTTCAACCTCGGATCAAGAAATGTGTTTCGCCAAAAA
T-AAAGCTCAGATGAGATGAGTATTGTCGCCGTA-TTTGTTCGTACATGTAGGCCCACATTGCATGCCAACAATACATGC
G-TGTTGTCGGTCGCCGTCATTTCA---TCGCCATTGTTCTTGTTTTTAATTTCCTTTTTCGAGAGTAGTCTGTTGTTGC
TCGCCTATCAGGTGCCCGGTGTATCCTCCCTGAATAAACACCCGCGTTAATTGTGTGTCTCCGCTTAAAATACATTTGTT
CATGTCACAC-AATTTTCTTAGGGACCAATCTTTAATATCTTTCTAGTTTTCGGCCTACTTAG--AACACTTATTGTCCT
ACAATTTTATCTC-----TGCCAGAAGTCAACCTTTGTGGCTGGCTAATTGTTTGCAACATTCTGAGTGCTCAGGTTATA
GGTAG-CATACCCTCATGGTCCCAATGCCTACACATA----TGTGCCAACTAATAAATTAATTGGATCTACATAAGTTTG
--TATATAAGGAAATACATAAGAAATATAACACAATTTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCATTCATAC
ATGGATGACCAATTATCCTCCTTAGTGGACAATACACTAGTAGAAAAATAACCTTATGTTCGCATCATTAGTCCCGGTTT
GATTACGGCCTGGGACTAATGTGATCATTAGTAGACAGTACACTAGTAGTGATGCCAAGAAGCTTGATGAGGTGTGTCGG
CGGTAACGACCTGCTGCAGACCCGAAGCTGGAAGGTAGGGTGTGGGTGTTGGAGGTGTGTGA-AAAAATCCAAGTGAGGG
ATGACACATGCCAAGATGCTCACGAATGGCCTTGCATGCAACATACCCCTTTTCTTGGGTA
>chr1B_2
-GGTGTCGTTTTCCTGCATGAGTGCAATG--GTACATGCTTCGGGTCTGTTGGTGCCACGGCCTGCGGCATTTGACGACG
ATCACCGGAGACATGACTGGAGGGGAGGAAGAAGAACACAGAAGATTTGCCGGCGCCCGAACGCCTCCCCACACGAACGG
GTTTTTCTGTTTTTCACCTCGAGCTCGAACTCGATTGCCTCGGCGATTACACAGGGAGGGAGTGGACTTTATACCCGCGA
GCTCCGACATGCCGGGCCGCGCACGTACGCTCCCACTTGCCACTCGCCACATCCCGCGCGCTCCTGCTCGCGCACTCCGA
TCGCATGCACATCGGTCGCCGCGGCCACACACGCACCCGACGCGGTCCACTCCTCCTGATCCCTTGCTAGCTACCCAGCG
CACACACGCGCTGACACACGCACACACGCACGCCTACACTTTGGCACGCACGCACGCACCCAATGTTGCCCTGGCCCGAG
TCCGATGCGTCCAGCGCACGCGCTCGCGCGCACCACACGCCGGGCTCGCCACGGGTTATTCCCAACACACTCCCCATAAG
CTGTGGCCTAGAGGAGTCCGTTGTCCTCGACTCCGGCGTTCGCCAGCAGCGCCCGTTCCGCCGCTGGCTCCTTCCGCATC
TCCGGGCAGTCGCGCTTGAAGTGGCCGCGCTCGCTGCACTTGTAGCAGCGGCCACGCCTGTTGCCGCCGTCCCGCGTCGC
CACGCTGCGCGCGTCGTCATCGTCGTCCCGAGCCCCCCCTTGGCGCCGCTCCCGCGCCCGCCACTGCGCCGCCGTGTACA
AGAGTTGGCCGTCCGGACGCTCGCCGCTGCTCTGCCCGCGAAGCCGCACATGCTCGTCGAATGCGCGCAGCCGCCTGAGC
ACCTCGTCGTAGGTGAGCTCCTCCAGCACGCAAAATTGCTCGATTCCGGCGAGACCGGGAAGAGACGGTCCGGCACCGTG
TCCATGAGCTTCTTCACCAGCTCGGTGTCGTCCAGTGTCTCCCTCAGGCTCGCGAACCTCGCCGTCATCCCCGCCAACCT
GCCGGCGTAGACGTCCAGGGACTCGCCGTCCTCCATCTTCAGCCGGTCCAGCTCGCCGCGCAACGTTGCGCTCCTCGCCG
CACACACCCATTCGGCGCCGACGAAGCGCACTTTGAGGGAGTCCCATACCTCCCTAGCCATGGGCTTCGCCGCCACCTGC
AGCAAGACGTCCTCCGGCAGCCCCGACAGGAGCAGCGCCCTCGCCGTCTTGCACTTCTTTGCGTTGACCGCGGCGTCGTT
TGCCGGCGCCACCGCTTCCCACAGCGTGTGGGCATCAAGGATCGCCTGTGCCTTGATCGCCCACACGGTGTAGTCGTCTA
GCACGAGCACCGGCATCCCCAAGGACACCGATCCGCCCGCGCTGCCTCCGTCGCCGTGTGGAACTAACGCCATCGTCGCC
GGCGATCTGCGTCAGCTCGCTCCCTTACCTCGCTCTGATGCCAAATGTTGGTGCCACGGCCTGCGGCACTCGACGACGAT
CATCGGAGACACGACTGGAGGGGAGGAAGAAGAACACCGAAGATTTGCCGGCGCTCGAATGCCTCCCCGCACGAACGGGT
TTTTCTGTTTTTCACCTCGAGCTCGAACTCGGTTGCCTCGATGATTACACAGGGAGGGAGTGGACTTTATACCCGCGAGC
TCCGACATGCCGGGTCGCACACGTACGCTCCCACTTGCCACTCGCCACATCCCGCGCGCTCCGGCTCACGCACTCCGATC
GCATGCACAGCGATCGCCGCGGCCACGCACGCACCCGACGCGGTCCACTCCTCCTGATCTCTCGCTAGCTACCCAGCGCA
CACACGCGCTGACACACGCACACACGCACGCCTACACTTGGGCACGCATGCACGCACCCAACATTGCCCTGGCCCGAGTC
CGACGCGTCCAGCGCACGCGCTCGCGCGCACCACACGCCGGGCTCGCCACGGGTTATTCCCAACAGGGTCTGCTGGACCG
GATGTATGCTCCCGGTATGTCATGCGGATTGCTCGGCGATGACCCAGTTCTAGATGGTGGGGCACGATAGCATCCTCTAT
TGTTGAGTTTGTAGATGTTGAGTGATGGCTTCGGATTGTTTAATGTATGTCATTATCAGACCTTTGTTAAATAGTTTAAT
AAAAATGATTGTGTGAATATATTGATAAAGTGGCCCGAGGTTTCAACCTCCTTTAC-AAAAAAATATGAAAATAGCAGAC
GTGTAGACCACATGTAATGT------------------------------------------------------------
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>chr1B_301
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---TAGACCACATGTAATGTGATACACCTCCTTTTTAATTAAGGCAGCCCTTTATTCGCATCACATAATCATTGCATACA
ATGTCCCAGATGCAACCCGTATCAACACCACAAAAGAGAGAGGAAGAAGCGTTTCTGCACCCAAGCTCCACCTGCCGATG
AACAATAAAATAAAATAAAATGTAAAAATGTTCAACAAAATCTGGAATTTTTACACATGAAAGTTAAGAGAATCTTCTAG
GCACGTGCCAAATTTCATGGTGTTTGGACATTTGAGAAGCTCTTGGCAAAATAACAAATTTGCCTTGTCAAAGAAACTTT
CAAAAAGCGCACCGTGTAGACCTAATTTTTTTTTCACCACGAACTCTTCAGATGTCCAAATTAACATCTTGAATTTTTGC
ACGCCCCTAGAAAATTCTCTCATATTTCATGTGTAAAATTTTCAGATTTGTTTGCTATTTTTTTTAATTTCCGATTCACC
GGGAGCAGATGAGCCTTTGCACCGTTTTGAATTATCGCAAAGTTCGCTCCTCCTAAACATTCCTAGCCACCGAAGCACGG
TCAAATATTTCAAAAAAGGTTACATTTCTTAATGTATAAATATATTTTTTATCTACCATGTCATAAAACTTTGAATGGAA
GTTCATACATCATACACTAGAATAAGAAAGGAGAACTTTCATTGTAGGAAAAATACGTCCTCACTAAGTAGTAGCTAAAA
TAGAAAACAATACTACTATTACCAACAATAATTGCGGTTTTATTTTTTTCGATGTGTAGATTAAATTGGGACTAGACTCT
TTATTACATGATATATAGATATTGCAAATTTGAAATGTGTTAACTTAGACATAGAAGAAATCTCAAATAGCTCAATGCGT
TGACTTAGACATACAAAAATCTCAACAACTTATGTCCAACAATTCCTTAAGCTTTAGATGTATCCACTTGGTCTAATTAT
GTCCTATGCTCAGGGGAGGCGAGAGGTGTTGTATGAGCTACGTGCAAGATACGTTGGGAGATCATGTTCAAAGAGTTCTT
CAGCAAGTATAGACGGAGATAATTTTGAAAGCTTGTAGATAATTTTG--A---CAACGAGCTAGGCCTTGATTTGGCTTA
C--AAGTCTAATAAGTGCCAGTTTTGCATATGTCCATTGAACATGTGGAAAAA-TGTGTGTA--GTGGTGCATGTTGTGT
GTCAAACTTTATCATCCTGCTCACCCTATCACCCACTTGATGTCATGCAAGTATTGTTTGACAAATGGTGAATTTTAATA
GCTCAAAATGTATCATCAAAATGATACAAAAGCAATGAACACACAACCAGGCTCTGCATAGTTAGGATGCACACGGCCAA
CACCAACGCACAAACACGAAAGCTACATCAGCAACTAGCAATGTGAAAACAAAAGACTGAAGCTATGCCTTGGTGGAGTA
AAGAAAAATGAAAAACTCCGAGCAATCAAAACAATGATCAATAATCTACAACAACAACCATATCAGCACCAACCATCTCT
TAACATCAGTTGTGATGTCATGCCAGCATTACAGATTGCCAGGTAAGGTGCCAAATCTATGCCTATAAATAGACGCGCTT
CCAGCTCTGGCAAACAACAACT---A---CATCTACACTCCACTCCACTCCATAATCATACGAGATAAGTGATACAATTT
TACGTGCAAGCCTTAGAAGCAACAATGAAGAACACCAAGCTCGTGGCAATCCTTGTTCTCCAAGCCATCCTAGTCATGGG
AATCCTTGCACATGTGAATGGTTC----GTTGTTGTTCATGCTTATATATTCTATGTTGTTCCCTGAAGAAAGTTTGATT
TCTTTTTTTTGTGATGTCAATGTGGCCTTATGTATCTTATAAACCATTACCTGACGTGATGCCATGCCATGAATGCATGC
AGCCAACTACTTCCCCATATGTTGCAACGAATGCAGGTCCTTCTCAGGGGTGGTCATCTGTGACGACGCCCATCCTCAGT
GCCCCAAGGGCTGCTCCACATGCCGCCCGGTGCAGACGGGCAGTGTCAAGATGTTGCAGTGCGCCGACATGCGCTCCACC
ATCAATGGCACACGCGATCCACGCTGC-AAGAAGAACTAATAGGTTCAACCTCGGATCAAGAAATGTGTTTCGCCAAAAA
T-AAAGCTTAGATGATATGAGCATTGTCACCTTA-TTTGTTTGTACATGTAGGCCCACATTGCACGCCAACAATACATCT
G-TGTTGTCGGTCGCCGTCATTTCGTCGTCGCCATGGTTCTTGTTTTTAATTTCCTTTTTCGAGAGTAGTCTATTGTTGC
TCGCCTACCAGGTGCCCGGTGTATCCTCCCTGAATAAACACCCGTGTTGATTGTGTGTCTCCGCTTAAAACGCATTTGTT
CATGTCACAC-AATTTTCTTAGGGACCAGTCTTTAATATCTTTCTAGTTTTCAGCCTACTTAG--AACACTTATTGTCCT
ACAATTTTATCTG-----TGTCAGAAGTCAACCTTTGTGGCTGGCTAATTGTTTGCAACATTCCGAGCACTCAGGTTATA
GGTAG-CGTATCCTCATGGTCCCAATGCCTACACATA----TGTGCCAACTAATAAATTAATTTGATATACAT-------
-----------AAATACATAAGAAATATAACACAATTTTCCACATGTAACACCCTTAAGAAGGTATGAGACCCCCCCCCC
CCACACACACATAACTCTCTCA----------------------------------------------------------
---------------------------------------------------------------------CTCATTCATAC
ATCAATGACCAATTATCCTCCTTAGTGGAC--------------------------------------------------
--------------------------------------------AGTAGTGATGCCAAGAAGCTTGATGAGGTGTGTCGG
CGGTAATGACCTGCTGCAGACCTGAAGCTGGAAGGTAGGGTGTGGATGTTGGGGTGTGTGTGTAAAAATCCAAGTGAGGG
ATGACATATGCCAAGATGCTCACAAACGTCCTTGCATGCAACGTACCCCTTTTCTTGGGTA
>chr1D_432
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------------------------------------------------ATACATTCGAAGATCGTGTTCCAAGAGTTCTT
CACCAAGTATAGATGGAGATGTTTTTGAAAGGTTATAGATGAAGATGTAA---CAATGAGCTAGGCCTAGATTTGGCCTA
C--AAGTCTAATGATTGCCAATTT-GCAC--GTCCATTGAACATGTGGAAACA-TATGTGTATAGTGGTGCACGTTGTGT
GTCGGACTTTATCACCCCGCTCACCCAG-T--------------------------------------------------
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------------TGATGGCACGGTGGCATAGTAGATTGGCAAGTAAGGTGCCAAATCTGTGCCTATAAATAGAGGTGCTA
CTAACTCTGGCCAACAACAACA---ATTACAACATAGTATTCCACT----CGCAACCATAAGAGATAAGTGAGAGAGATT
TGCTCGAAAACCTTAAAATCAACCCTGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGTCATCCTGGTCATGGG
AATCCTCACACACGTGAATGGTTC----GTGGTTGTTCATGCTTCTTTATTCTAT-TTGTTTCCTTAAAAAAGTTTGATT
GCCTTTTT--GCAATTCCATTGATGTCTTCTATATCTCATAAGTGATT-ACTAACATGATACCATGCTATGCATGCGTAC
AGCCAACTACTTCCCCAAGTGTTGCGACAAATGCAGGTAATTCTCGGGGGTCGATGTATGTGACGACGCCCATCCTCAGT
GCCCCAAGGGCTGCTCCACATGCCGAGCGGTGCAGACAGGCCGTGTCAAGACGTTCCGGTGTGCCGACATGCGCTCCACC
ATCAATGGCACGTGCGGCCCACGTTGCAAAAAAAAACTAACCGGTTCAAC-TCATATCACAAGACTTGTTCCGCCAATAA
TAAAAGCTCACATAATATGAGCATTGTCATCGTGTTT-ATGCGTACATGTGGCCTCACAATGCA-------------TGT
ACTATTGTCGGCCGTCGTCGTCTT--------CGTCGTTATTG-TTTCTATCTGTCTCTTCGAGACTAAGTTGTTGTTTC
TCGCCGATCAGGTGCTCGTTCTATCTTCCGTGAATAAACACCTGTGTTAATTGTGTGTCTCCGTTTAAAGATAATTTGTT
CATGTCACACGAATTTTATGAGCAACTAGTGTTTAAATACCGGTGTGCTTTTGTACATAGTAAATAACTCTTATCGTCCT
ACTCTTTTATCATTTCATTGCTAGAATTCAAACTCTATGTCTGTTAAACTGTTATTAACATTCAGAGTGCTCAGGCTATA
TGTGGCTCTATCTTCGTA--------GTCTACACATG----TATGCAAAATAATAATTTCATTGGATCTACTTACGTCTA
TACATATGGAAATA------------------------------------------------------------------
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>chr1D_446
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--------------------------------------------------------------CATATTCCAAGAGTTCTT
CACCAAGTATAGACAAAGATGTTTTCGAAAGATTATAGATAGAGATGCAA---CAACGAGCTAGGCCTAGATTTGGCCTA
TAAAAGTCCAATAATTTCCAGTTC-GCACATGTCCATTGAACACGTGGAAAAA-ACTGTGGGTAGTGGTGCGCGCTATGT
GTCAAACTGTATTATCCGGCTCACCCACTT--------------------------------------------------
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------------TGATGGCGTGCAGGCATAGCAGATTGCCAAGCAAGGTGCTAAATCTACGCCTATAAATAGATGTGCT-
CTAGCTTTGGCCAACAACAAA---------AACATAGCATTCCACT----CACAACAA--AGAGGTAAGT--GAGAGCTT
TGCTCGAAAACCATAAAATCAACCATGAAGAACACCAAGCTCGTGGCGATCATTGTCCTCCATGCCATCCGGGTCATGGG
AATCCTTGTACACGTGAATGGTCGGTTTGTGGTTGTTCATG-T--TTTATTCTAT-TTCTTTACCTAAAAAAGTTTGATT
GCCTTTTT--GCAATTCCATTGATGTCTTATATATCTTATAAGTGGTT-CCTAACATCATACCATGCCATGCATGTGTGC
AGCCGACTACTTCCCCAAGTGTTGCGACAAATGCAGGTCGTTCTCGGGGGTCGACGTATGTGACGACGCCCATCCTCAGT
GCCCCAAGGGATGCTCCGCATGCCGGGCGGTGCAGACGGGCCGTGTCAAGATGTTCCGGTGCGCCGACATGCGCTCCACC
ATCAACGACACATGCGGCCCGCGCTGC-AAGAAGAACTGACCGGTTCAAGCTCGAATCATGATAATCGTTTCTCCAAAAA
T-AAAGCTCAGATAGGATGAGCACTGTCACCGTATTTTGTGCGTACATGTGGCCCCACATTGCACGCCGATAATGCATAC
ATTGTTGTCAGTCGCCGTCGTTTCATCATCGCCATTGTTCTTG-GTTTTAGTTTCCTCTTCAAGAGTAGTCAGTTGTTGC
TCGCTTATCAGGTGCCCGTTGTATCCTCCGTGAATAAACACCTGTGTTGATTGTGTGTCTCCACTTAAAACGCATTTGTT
CGTGTCACGCG-ATTTTCTTAGGGACCAGTGTTTAATGTATTTCTATTTTTCTGCCTACTTAG--AATGCTTATTGTCCT
ACTATTT-ATCTC-----TCCTAGAAGTCAAACTTTGTGGCTGCCAAATTGTTTGTAAAAT-------------GCTATA
GGTAGCTGTACACTCGTGGTCACAATGTCTACACATATGTGTGTCCCAATTAATAAATTAATTGGGTCTACATAAGTGTA
TATATATAAGGAAATACATGAGAAATACAACACAATTTTCC---------------------------------------
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>chr1B_951
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------------TGATGGCACGCGGGCATGGTAGATTGGAAAGTAAGGCGCCAAATCTGCACCTATAAATAGAGGTGCTA
CTAACTCTGGCCAACAACAGCA---ATTACAACATAGTATTCCACT----CACAACCTAAAGAGATAAGTGAGAGAGATT
TGCTCGAAAACCTTAAAATCAACCATGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGCCATCCTGGTCATGGG
AATCCTCCCACACATGAATGGTTC----GTAGTTGTTCATGCTTCTTTATTCTAT-TTGTTTCCTTTAAAAAGTTTGATT
GCCTTTTT--GCAATTCCATTGATGTCTTATATATCTTATAAGTGATT-ACTAACATGATACCATGCTATGTGTGCGTGC
AGCCAACTACTTCCCCAAGTGTTGTGACAAATGCAGGTCATTCTCGGGGGTCGATGTATGTGACGACGCCCATCCTCAGT
GCCCCAAGGGCTGCTCCACATGCCGCGCGGTGCAGACAGGCCGTGTCAAGATGTTCCGGTGTGCCAACATGCGCTCCACC
ATCAATGGCACGTGCGGCCCACGTTGC-AAAAAGAACTAACCAGTTCAAC-TCAGATCACAAGACTTGTTCCGCTAATAA
GAGAAGCTCATATAAGATGAGAATTGTCACCGTATTT-ATGCGTACATGTGGCCTCACAATGCACGCTGACAATGCAT--
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>chr1B_951
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------------TGATGGCACGCGGGCATGGTAGATTGGAAAGTAAGGCGCCAAATCTGCACCTATAAATAGAGGTGCTA
CTAACTCTGGCCAATAACAGCA---ATTACAACATAGTATTCCACT----CACAACCTAAAGAGATAAGTGAGAGACATT
TGCTCGAAAACCTTAAAATCAACCATGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGCCATCCTGGTCATGGG
AATCCTCCCACACGTGAATGGTTC----GTAGTTGTTCATGCTTCTTTATTCTAT-TTGTTTCCTTAAAAAAGTTTGATT
GCCTTTTT--GCAATTCCATTGATGTCTTATATACCTTATAAGTGATT-ACTAACATGATACCATGCTATGTGTGCGTGC
AGCCAACTACTTCCCCAAGTGTTGTGACAAATGCAGGTCATTCTCGGGGGTCGATGTATGTGACGACGCCCATCCTCAGT
GCCCCAAGGGCTGCTCCACATGCCGCGCGGTGCAGACAGGCCGTGTCAAGATGTTCCGGTGTGCCGACATGCGCTCCACC
ATCAATG-----------CCACGTTGC-AAAAAGAACTAACCAGTTCAAC-TCAGATCACAAGACTTGTTCCGCCAATAA
GAGAAGCTCATATAAGATGAGAATTGTCACCGTATTT-ATGCGTACATGTGGCCTCACAATGCACGCTGACAATGCAT--
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>chr1A_959
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--------------------TGCATGCATAGCAGATTGCCAAGCAAGGTGCTAAATCTACGCCTATAAATAGATGTGCTA
CTAGCTCTGGCCAACAACAACA---A---CAACATAGCATTCCACT----CACAACAATAAGAGATAAGTGAGA--GCTT
TGCTCAAAAACCTTAAAAACAACCATGAAGAACACCAAGCTTGTGGCGATCCTTCTCCTCCATGCCATCCTGGTCATGGG
AATCCTTGCACACGTGAATGGTTC----GTGGTCTTTCATG-TTCTTTATTCTAT-TT-TTTGCATAACAAACTTTGATT
GTCCTTTT--GCAATTCCATTGATGTCTTATATATCTTATAAGTGATT-ACTAATATGATAGCATGCCATGCATGCGTGC
AGCCAACTACTTCCCCAAGTGTTGTGACAAATGTAGGTCGTTCTCGGGGGTTGACATATGTGACGACGCCCATCCTCAGT
GCCCCAAGGGCTGCTCCACATGCCGCGCGGTGCAGACGGGCCGTGTCAAGACGTTCCGATGTGCCGACATGCGCTCCACC
ATCAACGGCACGTGCGGCCCACGCTGC-AAGAAGAACTGACCGGTTCAAGCAAGAATTAGGAGATGTGTTTCGCCAAAAA
T-AAAGCTCAGATGAGACGAGCATTGTGACCGTTTTT-GTGCATAGATGTGGCCCCACATTGCATGCCGACAATGCATAC
ACTATTGTCGGTCGCCGTCGTTTCATCATCACCATTGTTCTTG-GTTTTAGTTTCCTCTTCAAGAGTAGTCTATTGTTGC
TCACTTATCAGGTGCCCGTTGTATCCTTCGTGAATAAACACATATGTTGATTGTGTGTCTCCACTTAAAGCACATTTGTT
CATGCCACGCG-ATTTTCTTAGGGACCAATGTTTAATATCTTTCTAGTTTTTTGCCTACTTAG--AACGCTTATTATCCT
ACTATTTTATCTG-----TTCTAGAAGTCAAACTTTGTGGCTGCCAAATTGTTTGTAAAATTCCTAGTGCTCAGGCTATA
GGTAGCCATACCCTCGTGGTCCCAATGTCTACACATA----TGTGCCAATTAATAAATTAACTGAGTCTACATAAGTTTG
--TATATAAGGAAATAGATGAGAAATACAACACAATTTTCC---------------------------------------
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>chr1A_971
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--------------------------------AGATTGGCAAGTAAGGCGCAAAATCTGCGCCTATAAATAGAGGTGCTA
CTAACTCTGGCCAACAACAACGATTA---CAACATAGTATTCCACT----CACAACCTAAAGAGATAAGTGAGAGATATT
TGCTCGAAAACCTTAAAATCAACCATGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGCCATCCTGGTCATGGG
AATCCTCACACACGTGAATGGTTC----GTAGTTGTTCATGCTTCTTTATTCTAT-TTGTTTCCTTAAAAAAGTTTGATT
GCCTTTTT--GCAATTCCATTGATGTCTTATATATCTTATAAGTGATT-ACTAACATGATACCATGCTATGCTTGCGTGC
AGCCAACTACTTTCCCAAGTGTTGTGACAAATGCAGGTCATTCTCGGGGGTTGATGTATGTGACGACGCGCATCCTCAAT
GCCCCAAGGGCTGCTCCACATGCCGCGTGGTGCAGACAGGCCGTGTCAAGATGTTCCGGTGTGCCCACATGCGCTCCACC
ATCAATGGCACATGCGGCCCACGTTGC-AAAAAGAACTAACCGGTTCAAC-TCAGGCCACAAGGCTTGTTCCGCCTATAA
TAAAAGCTCATATAAGAAGAGCATTGTCATCGTGTTT-ATGCGTACATGTGGCCTCACAATGCACGCTGAGAATGCATGT
ACTATTGTCGGTCGTCGTCGTT--------------GTTATTG-TTTCTATTTACCTCTTCGAGACTAAGATGTTGTTGT
CCGCCGATCAGGTGCTCGTTCTATCCTCCATGAATAAAA-------TTAATTGTGTGCCTCCGTTTAAAGAGCATTTGTT
CATGTCACACAAATTTT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>SNPs
S----------------------------SS----------S--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-----------------S-----------S------S-------------------------------S-----------
--------------S---------------------------------------S-------------------------
---S--------------------------S-----------------------SSS---------------------S-
-------------------------S------------------S------------SS---------------------
------------S-------------------SSSS-S-SSSS-SS-SSSS-SS--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------SSSSSSS---------------------------
------------------S----------------------------------S----S---------------------
------------------------------------------------------S----------------------S--
----------S----------S------S---------S-------------S---------S-----------S-----
---S--S------------------------SS--------------------SSS-------S----------------
------------------S----------------------S--------------S---------------S-------
-S--------------------------S-----------------------------------------S---------
--------S-S-------------------------------------------S-----S-------------------
--S---------S---------------------S-------S-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-------------------------------------------------------------------S------------
-------------------S------------------------------------S-----------------------
--------------------------------------------------------------------------------
---------------------S------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-------------------------S---------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
-----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
--SS--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
------S---------------S----------------------S------S-SSSSSSSS------------------
------S----------------S--S-S-------------S------------------
>forward_2069
--------------------------------------------------------------------------------
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-------------------------------------------------CTAGATGGTGGGGCACGATG-----------
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>reverse_4157
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TTGC
AGCCAACTACTTCCCC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------
>forward_3849
--------------------------------------------------------------------------------
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---------------------------------------------------------------------TGGAGGCGCTT
CTAGCTCTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>reverse_5196
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GGTTT
GATTACGGCCTGGGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
