>input_sequence_75948
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-----------------------------------------------------------------------------CTA
TAAATAGAGGTGCTACTAACTCTGGCCAACAACAACGATTACAACATAGTATTCCACTCACAAC-CTAAAGAGATAAGTG
AGAGATATTTGCTC--GAAAACCTTAAAATCAACCATGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGCCATC
CTGGTCATGGGAATCCTCACACACGTGAATGGTTC----GTAGTTGTTCATGCTTCTTTATTCTATTTGTTTCCTTAAAA
AAGTTTGATTGCCTTTTTGCAATTCCATTGATGTCTTATATATCTTATAAGTGATT-ACTAACATGATACCATGCTATGC
TTGCGTGCAGCCAACTACTTTCCCAAGTGTTGTGACAAATGCAGGTCATTCTCGGGGGTTGATGTATGTGACGACGCGCA
TCCTCAATGCCCCAAGGGCTGCTCCACATGCCGCGTGGTGCAGACAGGCCGTGTCAAGATGTTCCGGTGTGCCCACATGC
GCTCCACCATCAATGGCACATGCGGCCCACGTTGCAAAAA-GAACTAACCGGTTCAAC-TCAGGCCACAAGGCTTGTTCC
GCCTATA-------------------------------------------------------------------------
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>chr1A_1_TraesCS1A01G265500
TATGTG--------------------------------------------------------------------------
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---------------------------------TATTGGAAAGGGAATTGTTCATGTCAAACGAAATCGAGGTAAATCTA
TAAGGTGATAAGGAACTTTTTTTAACATTATTAAGGCAGCTCTTTATTCATGTCACAGAGTCATTACATACAGTGTCCTG
GATGCGACCAGGAGTAATATCACGGATGAGAGAGTAAGAACAAAGCTCACTCCTCCTAGACTTCCTAATCCCAAGCCATA
GAACCAAAGTCAAAATATTTCAAATAAGAAAAGGTAAATTTCTTAATAATGTACAGACACGTATTTCATATTTACCCTGT
CACACCTATTAGTCCAATAGCAGTGATCCGCCTCGTTTTTGTTGGCCACCTATTAGATCCAAAGAAGCATAGGCCAGTTG
TGAGATAGTATGTAGTATA-ACGAGTCTATTTATGAGGTAATTTTTTTGGTGAATAATGAAAATGTGCTAGCTTTTGAAG
TAAGAAAACTTTATGATTATATGTAGGTTATTAATGAAATGTGTTTGTGGTACTTAGGTTGATTGAGGTTTTCTTTTGTC
TAAGTCGATGATGCTAGCGGTCCAATGTAATCTCAATACACTTATCCATGCATGACACATAGGAAAGCTCAATGCGTTGA
CTTAGACATTAAAGAATCTCAAAAAACTTATAATCAGCAGCACACTTAAGCTTTACATGTATC--CATTTGGTCCAGTTT
TGTCCTATACTCAAGGAGGCGAGAGGTGGTGCATCAGCTATGTGCAAGATACATTTGACGATCGTGTTCCCAGAGTTCTT
CACAAAATATAGATGGAGATGTTTTTGAAAGGTTATAGATGAAGACGTAACAATGAGCTAGGCCTGGATTTGGCCTACAA
--GTCTAATGATTGCCAATTTGCAT--GTTCATTGAACATGTGG-AAAAA-TATGTGTATAGTGGTGCACGTTGTGTGTC
GAACTTTATCATCCCATTCACCCAGTT-GATGGCACGCTGACATGGTAGATTGGCAAGTAAGGCGCAAAATCTGCGCCTA
TAAATAGAGGTGCTACTAACTCTGGCCAACAACAACGATTACAACATAGTATTCCACTCACAAC-CTAAAGAGATAAGTG
AGAGATATTTGCTC--GAAAACCTTAAAATCAACCATGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGCCATC
CTGGTCATGGGAATCCTCACACACGTGAATGGTTC----GTAGTTGTTCATGCTTCTTTATTCTATTTGTTTCCTTAAAA
AAGTTTGATTGCCTTTTTGCAATTCCATTGATGTCTTATATATCTTATAAGTGATT-ACTAACATGATACCATGCTATGC
TTGCGTGCAGCCAACTACTTTCCCAAGTGTTGTGACAAATGCAGGTCATTCTCGGGGGTTGATGTATGTGACGACGCGCA
TCCTCAATGCCCCAAGGGCTGCTCCACATGCCGCGTGGTGCAGACAGGCCGTGTCAAGATGTTCCGGTGTGCCCACATGC
GCTCCACCATCAATGGCACATGCGGCCCACGTTGCAAAAA-GAACTAACCGGTTCAAC-TCAGGCCACAAGGCTTGTTCC
GCCTATAATAAAAGCTCATATAAGAAGAGCATTGTCATCGTGTTTA-TGCGTACATGTGGCCTCACAATGCACGCTGAGA
ATGCATGTACTATTGTCGGTCGTCGTCGTT------GTTATTG------TTTCTATTTACCTCTTCGAGACTAAGATGTT
GTTGTCCGCCGATCAGGTGCTCGTTCTATCCTCCATGAATAAAA-------TTAATTGTGTGCCTCCGTTTAAAGAGCAT
TTGTTCATGTCACACAAATTTTGCAAGCAACTAGTGTCTAAATATCGGTTTGCTTTTATACATAGTAAATAACTCGTATC
ATCCTGCTCTTCTATCATTTCTTTGCCAGAATTCAAACACTATATCTGCTAAACCGTTATTAACATTCAGAGTGCTGAGG
CTATATGTGGCTCTATCTTCATATTCTGCACATGTATATGAAATGATAATTTCATTGGATCTACTTTCGTCTACACAAAT
GGAAATACGGAAGAAACACAACATAGTTGTTCACGTGTACCGCCCTTAAACTGGTGCGAGAACCATCTCTGTCGCTCCCC
CGCTCTCACTCTCATACATCCAAGAACGGGCATCCTCGTCAATGGACAACAACAGTGACAAGAAGCTTGACGAGGTACGT
CGGTGGTGACCATCCACTACAGATCCGACGCTGAGAGGTAGGGTGTGGACATCGATGATGTGTCTATAAATCGC------
---------------------------------TTTCCTTGGGTAGATGTCATCGCGTGAACATATTGTGTAATCTTGTT
AATATGGATGCAAGACATGTTCTTCTTAGAAAACCTTGGAAGTATGATGTGGGTACTATACATAAAGTTGCGATGAACAC
GACGATGCTGCCATAGAAGGGAGGACAAGGTCACCGTGCTCATGCCTCTTCAAGGTCGATCTCAACCCTTGATGTTCAAC
GTATTAAACCTTCGCCCAGGGAAGTGGCCCGAAGATGACTGCCAGAGAGTGTCAACAACAAGTAGGACATAGTAGTTATC
TCTATCTAGTATCCATGTTCGTCACA
>chr1B_2
TGGATTTGTCCTACAAGTGTAATAATTGCCCTGTGCGGATATGTCATGTGGAACACAAATGTGTGCAGTGGTGCCCCCAT
GTGTCTCAAACTTTATCATCCCGCTCATGATGGCATGCATGCATGCAAAGCAGATTGCCAAGTAAGGTGCCAAATCTGCA
CCTATAAATAGAGGTGCTACGAGCTCTGGCGAACAACAACTACAACATAGCTTTACACACAACCATAAGACAGAAGTGAG
AGAGCTTTGCGGCAAACCATAGAAGCAACCATGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGCCATCATGGT
CATGGGAATCCTCGCACACGTGAATGGTTGGTGGTTGTTCATGCTTGTTTATTCTATTTGTTTCCCTGACAGATTGAATG
CCCTTCTGTGATTACATTGAGTCTTATTATATCTTATGTGATTAACTAATTGTGATGTCATGCCATGCATGTGTGCAGCC
GATTACTTCCCGAAGTGCTGCAACAACTGCAGGTCCTTCTCGGGGGTCGACGTCTGCGACGACGCACACCCCCAGTGCCC
CAAGGGCTGCTCGGCCTGCCGCGTGGTGACGCCGAGCCCTCACAAGACGTTCCGGTGCGCCGACATGAAGAGCACCGTCG
ACGGCACCTGCGGCGGGCCATGCAAGAAGCACTGATCCGTTCAGGGCTTCAGGCTCAGACGTGGTGTGCCGTCTAAAATA
AAGCTCAGATGATGAGCCAGCTTGTCACAGTGTTTGTGCGTGCCTGTGGCTCCACCTTGCATACCGACAATACATACGCT
GTTGTCGGTCGTCGTTGTTTCATCACCGTCATTGTTCTTCGTTTTAATTTCTTCTTCAAGAGTTGTCTGTTGTTGCTCGC
CTTTCAGGTGCCTGTTGTATCATCCGCGAATAAAAACGTGTGTTGGTTGTGTGTCTCAGCTTAAAATGCCTTTGGTCATG
TCACGCCATTTTCTTAGGGACATGGCTTTAATATCTTTCTACTTGTCTGCACTGTAGAGAACTCTTATTGTCCTACTATT
CTCTCTCCCAAAATTCGAAATTTTTGGCTGCCAAATTGTCTGTAACATTCAGAGTGCTCAGACTATTGGTAGATCTACCC
TCTTGGTCCCAATGCATACATATATGTGCCAAATAATAAATTTATTGTGTCTACTTTAAGTCTATATATAAGGAAATGCG
TAAAGAAATACAGAACGTAATTGTTCACGTGTGTCGCCCTTGAGAAGGTATGAGAATCATCCCCACCACCCCTGCCCCTA
GCCCCAGGTCTCTCGCTCGTTCCATTGGCGGCAACAATCCATTGCAAACTCGATGTCGGGAGGTAGGCTGGATGCCGGCT
GCTTATAGATCCAAATGAGTAAGAGCATCTACAGTCGGGCGTCTCAAACCTTTCTCAAACGCCCGGACGACCGTCGCAAA
CTGGCTTCAAACACTGACCGGCACCCTCATATCCAACCCAAAAATGTGGCGGATATGGGGGCGTCTTGGCATGCCCGGGA
CAGCCCGCCACATCGGACCCGGCCGACGTTGGCCCACCCGATCGCACATACATTCGTCCTCATCCGCTCGCCGAAGCAAA
TCCTAGCCACTTCACTCCACTCTCCAATGGTCTTGCCGGATTTACTGAGTCCGGCTGTAGATGCTCTAATAAGAGGCCAG
GGTGCTCACCAATGCAACTTACTCCTTTACTTTGGTAAATATCATCAATTAAATATATCGTGTGATGTAGACATGTAGTT
AATATGGATGCAAGCCATTTTCTTCTTGGAAGACATTGCAACGATCCGTGGAGTGTTTTTACCTTGCATTTTACATGTTA
CAGTGCCTATTCTTTGCGGCAGAAATTTACCATGGCTCGATGGTGTCTGCACTTGTTGCCAGCCACCTGTGCCTTCTATA
GCCGTAGTACGTACTCCGTACAAGTTTTGCATGTGGTACTGGGCTCGTCATCATGGCTTGATGCAATCTCAAGCTCACGT
GGAAGTAGTGGCCGCCTGGCCGGCCATGCGACATTTTCCCTTTCTTTAGCAAAGGCTATGCGACATTGACTGGCTCAGTG
ATGCCGTTTCTATCATGCAAGGGGCAACTTCTTCTATCACACAAGGGCCAAGTTCTGTGCGTACAAATAGAACGTGAAAG
CTGTGTGTTTACAACTGCAGTAATTTGCGCCCGTGCAATCTGCACTGCAGTACGCGACAGCAGGTCCTGAAGCTCCCACG
CGAGTAGTATGTTTTTTCTCGCTGGTGAACACTTTTACCAATTGAAGACCGTGTTCTGGTTTAAGAAGAACATGGAAGAT
CGTTTGATTTGCTGCAAAGGGAGTCGTATGCCTATTTTTCTTGTCGGTGACCTGGCTTTAGTAAGGTTTGTCCCTTTGTT
ATCGCCCCAAAGAAAAAGACTGTAGCCCTTGGTGGTTTAGTTTATAGAAGAAACACATGAGCCACACAGTGCTAAGTCCA
GGACTCGAACACTGGTGGGCAGCGAACACGCCCGTGCTGCTAAACACACGTGCGACACTTGGTTCTCCTAATTTGAATTT
GATACACAAAGTTACAAGCCATGTGTATCCTTTTAGCGCATTATTTCTCTACCATGGCGTGCCTATCTATATACCTTCAC
AGTCCATATTAATCTTATGAAATGTGGCGGTGACGTGACGCGGAGACAAGTAAGGGGTGAGTAAAGTGGCGGTGGTAGAT
ATGTGAAGATAGTAGCCGTGTAGACCTGATGTGTATTGGAAAGGGAATTGTTCATGTCAAACGAAACCGAGGTAACTCTA
TAAAGTGATAAGGAACTTTTTTGAACATTAGTAAGGCAGCTCTTTATTCATGTCACAGAGTCATTGCATACAATGTCCTG
GATGCGACCAGGAGTAATATCACGGATGAGAGAGTAAGAACAAAGCTCACTCCTCCTAGACTTCCTAATCCCAAGCCATA
GAAGCAAAGTCAAAATATTTCAAAAAAGAAAAGGTAAACTTCT---TAATGTACAGACACGTATTTCATATTTACCCTGT
CACACCTATTAGTTCAATAGCAGTGATCCGCCTCGTTTTTGTTGGCCACCTATTAGATCCAAAGAAGCATAGGCTAGTTG
TGAGAGAGTATGTAGTATA-ACGAGTCTATTTATGAGGTAATTTTTTTAGTGAATAATGAAAATGTGCTAGCTTTTGAAG
TAAGAAAACTTTATGATTATATGTAGGTTATTAATGAAATGTGTTTGTGGTACTTAGGTTGAGTGAGGTTTTCTTTTGTC
TAAGTCGATGATGCTAGCGGTCCGATGTAATCTCAATACACTTATCCATGCATGACACGTAGGAAAGCTCAATGTGTTGA
CTTAGACATTAAAGAATCTCAAAAAACTTATAATCAGAAACACGCTTAAACTTTACATGTATC--CATTTGGTCCAGGTA
TGTCCTATACTCAAGGAGGCGAGAGGTGGTGCATGAGCTATGTGCATGATACATTTGAAGATCGTGTTCCAAGTGT-CTT
CACCAAATACAGATGGAGATGTTTTTGAAAGGTTATAGATGAAGACATAACAATTAGCTTGGCCTAGATTTGGCCTACAA
--GTCGAATGATTGCCAATTTGCAT--GTCCATTGAACATGTGAAAAAAA-TATGTGTATAGTGGTGCACGTTGTGTGTC
GAACTTTATCATCCCACTCACCCAGTT-GATGGCACGCGGGCATGGTAGATTGGAAAGTAAGGCGCCAAATCTGCACCTA
TAAATAGAGGTGCTACTAACTCTGGCCAACAACAGCAATTACAACATAGTATTCCACTCACAAC-CTAAAGAGATAAGTG
AGAGAGATTTGCTC--GAAAACCTTAAAATCAACCATGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGCCATC
CTGGTCATGGGAATCCTCCCACACATGAATGGTTC----GTAGTTGTTCATGCTTCTTTATTCTATTTGTTTCCTTTAAA
AAGTTTGATTGCCTTTTTGCAATTCCATTGATGTCTTATATATCTTATAAGTGATT-ACTAACATGATACCATGCTATGT
GTGCGTGCAGCCAACTACTTCCCCAAGTGTTGTGACAAATGCAGGTCATTCTCGGGGGTCGATGTATGTGACGACGCCCA
TCCTCAGTGCCCCAAGGGCTGCTCCACATGCCGCGCGGTGCAGACAGGCCGTGTCAAGATGTTCCGGTGTGCCAACATGC
GCTCCACCATCAATGGCACGTGCGGCCCACGTTGCAAAAA-GAACTAACCAGTTCAAC-TCAGATCACAAGACTTGTTCC
GCTAATAAGAGAAGCTCATATAAGATGAGAATTGTCACCGTATTTA-TGCGTACATGTGGCCTCACAATGCACGCTGACA
ATGCAT--------------------------------------------------------------------------
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>chr1B_2
TGGATTTGTGCTACAAGTGTAATAATTGCCCTGTGCGGATATGTCATGTGGAACACAAATGTGTGCAGTGGTGCCCCCAT
GTGTCTCAAACTTTATCATCCCGCTCATGATGGCATGCATGCATGCAAAGCAGATTGCCAAGTAAGGTGCCAAATCTGCA
CCTATAAATAGAGGTGCTACGAGCTCTGGCGAACAACAACTACAACATAGCTTTACACACAACCATAAGACAGAAGTGAG
AGAGCTTTGCGGCAAACCATAGAAGCAACCATGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGCCATCATGGT
CATGGGAATCCTCGCACACGTGAATGGTTGGTGGTTGTTCATGCTTGTTTATTCTATTTGTTTCCCTGACAGATTGAATG
CCCTTGTGTGATTACATTGAGTCTTATTATATCTTATGTGATTAACTAATTGTGATGTCATGCCATGCATGTGTGCAGCC
GATTACTTCCCGAAGTGCTGCAACAACTGCAGGTCCTTCTCGGGGGTCGACGTCTGCGACGACGCACACCCCCAGTGCCC
CAAGGGCTGCTCGGCCTGCCGCGTGGTGACGCCGAGCCCTCACAAGACGTTCCGGTGCGCCGACATGAAGAGCACCGTCG
ACGGCACCTGCGGCGGGCCATGCAAGAAGCACTGATCCGTTCAGGGCTTCAGGCTCAGACGTGGTGTGCCGTCTAAAATA
AAGCTCAGATGATGAGCCAGCTTGTCACAGTGTTTGTGCGTGCCTGTGGCTCCACCTTGCATACCGACAATACATACGCT
GTTGTCGGTCGTCGTTGTTTCATCACCGTCATTGTTCTTCGTTTTAATTTCTTCTTCAAGAGTTGTCTGTTGTTGCTCGC
CTTTCAGGTGCCTGTTGTATCATCCGCGAATAAAAACGTGTGTTGGTTGTGTGTCTCAGCTTAAAATGCCTTTGGTCATG
TCACGCCATTTTCTTAGGGACATGGCTTTAATATCTTTCTACTTGTCTGCACTGTAGAGAACTCTTATTGTCCTACTATT
CTCTCTCCCAAAATTCGAAATTTTTGGCTGCCAAATTGTCTGTAACATTCAGAGTGCTCAGACTATTGGTAGATCTACCC
TCTTGGTCCCAATGCATACATATATGTGCCAAATAATAAATTTATTGTGTCTACTTTAAGTCTATATATAAGGAAATGCG
TAAAGAAATACAGAACGTAATTGTTCACGTGTGTCGCCCTTGAGAAGGTATGAGAATCATCCCCACCACCCCTGCCCCTA
GCCCCAGGTCTCTCGCTCGTTCCATTGGCGGCAACAATCCATTGCAAACTCGATGTCGGGAGGTAGGCTGGATGCCGGCT
GCTTATAGATCCAAATGAGTAAGAGCATCTACAGTCGGGCGTCTCAAACCTTTCTCAAACGCCCGGACGACCGTCGCAAA
CTGGCTTCAAACACTGACCGGCACCCTCATATCCAACCCAAAAATGTGGCGGATATGGGGGCGTCTTGGCATGCCCGGGA
CAGCCCGCCACATCGGACCCGGCCGACGTTGGCCCACCCGATCGCACATACATTCGTCCTCATCCGCTCGCCGAAGCAAA
TCCTAGCCACTTCACTCCACTCTCCAATGGTCTTGCCGGATTTACTGAGTCCGGCTGTAGATGCTCTAATAAGAGGCCAG
GGTGCTCACCAATGCAACTTACTCCTTTACTTTGGTAAATATCATCAATTAAATATATCGTGTGATGTAGACATGTAGTT
AATATGGATGCAAGCCATTTTCTTCTTGGAAGACATTGCAACGATCCGTGGAGTGTTTTTACCTTGCATTTTACATGTTA
CAGTGCCTATTCTTTGCGGCAGAAATTTACCATGGCTCGATGGTGTCTGCACTTGTTGCCAGCCACCTGTGCCTTCTATA
GCCGTAGTACGTACTCCGTACAAGTTTTGCATGTGGTACTGGGCTCGTCATCATGGCTTGATGCAATCTCAAGCTCACGT
GGAAGTAGTGGCCGCCTGGCCGGCCATGCGACATTTTCCCTTTCTTTAGCAAAGGCTATGCGACATTGACTGGCTCAGTG
ATGCCGTTTCTATCATGCAAGGGGCAACTTCTTCTATCACACAAGGGCCAAGTTCTGTGCGTACAAATAGAACGTGAAAG
CTGTGTGTTTACAACTGCAGTAATTTGCGCCCGTGCAATCTGCACTGCAGTACGCGACAGCAGGTCCTGAAGCTCCCACG
CGAGTAGTATGTTTTTTCTCGCTGGTGAACACTTTTACCAATTGAAGACCGTGTTCTGGTTTAAGAAGAACATGGAAGAT
CGTTTGATTTGCTGCAAAGGGAGTCGTATGCCTATTTTTCTTGTCGGTGACCTGGCTTTAGTAAGGTTTGTCCCTTTGTT
ATCGCCCCAAAGAAAAAGACTGTAGCCCTTGGTGGTTTAGTTTATAGAAGAAACACATGAGCCACACAGTGCTAAGTCCA
GGACTCGAACACTGGTGGGCAGCGAACACGCCCGTGCTGCTAAACACACGTGCGACACTTGGTTCTCCTAATTTGAATTT
GATACACAAAGTTACAAGCCATGTGTATCCTTTTAGCGCATTATTTCTCTACCATGGCGTGCCTATCTATATACCTTCAC
AGTCCATATTAATCTTATGAAATGTGGCGGTGACGTGACGCGGAGACAAGTAAGGGGTGAGTAAAGTGGCGGTGGTAGAT
ATGTGAAGATAGTAGCCGTGTAGACCTGATGTGTATTGGAAAGGGAATTGTTCATGTCAAACGAAACCGAGGTAACTCTA
TAAAGTGATAAGGAACTTTTTTGAACATTAGTAAGGCAGCTCTTTATTCATGTCACAGAGTCATTGCATACAATGTCCTG
GATGCGACCAGGAGTAATATCACGGATGAGAGAGTAAGAACAAAGCTCACTCCTCCTAGACTTCCTAATCCCAAGCCATA
GAAGCAAAGTCAAAATATTTCAAAAAAGAAAAGGTAAACTTCT---TAATGTACAGACACGTATTTCATATTTACCCTGT
CACACCTATTAGTTCAATAGCAGTGATCCGCCTCGTTTTTGTTGGCCACCTATTAGATCCAAAGAAGCATAGGCTAGTTG
TGAGAGAGTATGTAGTATA-ACGAGTCTATTTATGAGGTAATTTTTTTAGTGAATAATGAAAATGTGCTAGCTTTTGAAG
TAAGAAAACTTTATGATTATATGTAGGTTATTAATGAAATGTGTTTGTGGTACTTAGGTTGAGTGAGGTTTTCTTTTGTC
TAAGTCGATGATGCTAGCGGTCCGATGTAATCTCAATACACTTATCCATGCATGACACGTAGGAAAGCTCAATGTGTTGA
CTTAGACATTAAAGAATCTCAAAAAACTTATAATCAGAAACACGCTTAAACTTTACATGTATC--CATTTGGTCCAGGTA
TGTCCTATACTCAAGGAGGCGAGAGGTGGTGCATGAGCTATGTGCAGGATACATTTGAAGATCGTGTTCCAAGTGT-CTT
CACCAAATACAGATGGAGATGTTTTTGAAAGGTTATAGATGAAGACATAACAATTAGCTTGGCCTAGATTTGGCCTACAA
--GTCGAATGATTGCCAATTTGCAT--GTCCATTGAACATGTGAAAAAAAATATGTGTGTAGTGGTGCACGTTGTGTGTC
GAACTTTATCATCCCACTCACCCAGTT-GATGGCACGCGGGCATGGTAGATTGGAAAGTAAGGCGCCAAATCTGCACCTA
TAAATAGAGGTGCTACTAACTCTGGCCAATAACAGCAATTACAACATAGTATTCCACTCACAAC-CTAAAGAGATAAGTG
AGAGACATTTGCTC--GAAAACCTTAAAATCAACCATGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGCCATC
CTGGTCATGGGAATCCTCCCACACGTGAATGGTTC----GTAGTTGTTCATGCTTCTTTATTCTATTTGTTTCCTTAAAA
AAGTTTGATTGCCTTTTTGCAATTCCATTGATGTCTTATATACCTTATAAGTGATT-ACTAACATGATACCATGCTATGT
GTGCGTGCAGCCAACTACTTCCCCAAGTGTTGTGACAAATGCAGGTCATTCTCGGGGGTCGATGTATGTGACGACGCCCA
TCCTCAGTGCCCCAAGGGCTGCTCCACATGCCGCGCGGTGCAGACAGGCCGTGTCAAGATGTTCCGGTGTGCCGACATGC
GCTCCACCATCAATGCCACGTTGC------------AAAAAGAACTAACCAGTTCAAC-TCAGATCACAAGACTTGTTCC
GCCAATAAGAGAAGCTCATATAAGATGAGAATTGTCACCGTATTTA-TGCGTACATGTGGCCTCACAATGCACGCTGACA
ATGCAT--------------------------------------------------------------------------
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>chr1D_303
TAGCC---------------------------------------------------------------------------
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---------------AATAACAGTGATCCGGCTCGTTTCTGTTGGCCACCTATTAAATCCGAACCAGCATTGGCCAGTTG
TGAGAGAGTATCGTACTATGACGAGTCTATTTATGAGGTAATTTTTTTGGTGAATAATGGAAATGTGGTAGCTTTTGAAG
TAAGAAAACTTTATGATTATATGTAGGTTATTAATAAAACGTGTTTGTGGTACCTAAGTTGAGTGAGATTTTCTTTTGTT
TGAGTTGACGATGCTAGCGGTCCGATGTAATCTCAATACACTTATCCATGCATGACACATAGGAAAGCTCAATGCGTTGA
CTTAGACATTAAAAAAACTCAAAAAAGTTATAATCAGCAACACCCTTAAGCTATACATGTATAA--ATTTGGTCCAGTTA
TGTCCTATGCTCAAGGAGGTCAGAGGTGGTACATGAGCTATGTGCAAGATACATTCGAAGATCGTGTTCCAAGAGTTCTT
CACCAAGTATAGATGGAGATGTTTTTGAAAGGTTATAGATGAAGATGTAACAATGAGCTAGGCCTAGATTTGGCCTACAA
--GTCTAATGATTGCCAATTTGCAC--GTCCATTGAACATGTGG--AAACATATGTGTATAGTGGTGCACGTTGTGTGTC
GGACTTTATCACCCCGCTCACCCAGTT-GATGGCACGGTGGCATAGTAGATTGGCAAGTAAGGTGCCAAATCTGTGCCTA
TAAATAGAGGTGCTACTAACTCTGGCCAACAACAACAATTACAACATAGTATTCCACTCGCAAC-CATAAGAGATAAGTG
AGAGAGATTTGCTC--GAAAACCTTAAAATCAACCCTGAAGAACACCAAGCTCGTGGCGATCCTTGTCCTCCAGGTCATC
CTGGTCATGGGAATCCTCACACACGTGAATGGTTC----GTGGTTGTTCATGCTTCTTTATTCTATTTGTTTCCTTAAAA
AAGTTTGATTGCCTTTTTGCAATTCCATTGATGTCTTCTATATCTCATAAGTGATT-ACTAACATGATACCATGCTATGC
ATGCGTACAGCCAACTACTTCCCCAAGTGTTGCGACAAATGCAGGTAATTCTCGGGGGTCGATGTATGTGACGACGCCCA
TCCTCAGTGCCCCAAGGGCTGCTCCACATGCCGAGCGGTGCAGACAGGCCGTGTCAAGACGTTCCGGTGTGCCGACATGC
GCTCCACCATCAATGGCACGTGCGGCCCACGTTGCAAAAAAAAACTAACCGGTTCAAC-TCATATCACAAGACTTGTTCC
GCCAATAATAAAAGCTCACATAATATGAGCATTGTCATCGTGTTTA-TGCGTACATGTGGCCTCACAATGCA--------
-----TGTACTATTGTCGGCCGTCGTCGTCTTCGTCGTTATTG------TTTCTATCTGTCTCTTCGAGACTAAGTTGTT
GTTTCTCGCCGATCAGGTGCTCGTTCTATCTTCCGTGAATAAACACCTGTGTTAATTGTGTGTCTCCGTTTAAAGATAAT
TTGTTCATGTCACACGAATTTTATGAGCAACTAGTGTTTAAATACCGGTGTGCTTTTGTACATAGTAAATAACTCTTATC
GTCCTACTCTTTTATCATTTCATTGCTAGAATTCAAACTCTATGTCTGTTAAACTGTTATTAACATTCAGAGTGCTCAGG
CTATATGTGGCTCTATCTTCGTAGTCTACACATGTATGCAAAATAATAATTTCATTGGATCTACTTACGTCTATACATAT
GGAAATATGGGAGAAACACAACATAGTTGTTCATGTGTACAACCCTTAAGAAGGTGCGAGAACCATCTCTGTCACTTCCC
CGCTCTCACTCTCATACATCCAAGAACGTGCGTCCTCTTCAATGGACAACAATGGTCACGAGAAGCTTGACGAGGTA-GT
CGGTGGTGACCATCCACTACAGATCCGACGCTGAGAGGTAGGGTGGGGACATCGATGATGTGCCTACAAATCCAAAAGGG
TGCTCACGAATGGTCGTGCCGGCACCTTATCCTTTTCCTTGGGTACATGTCATCGCTTGAATACATTGTGTGATCTTGTT
AATATGGATGCAAGACATGTTCTTCTTCGAAAACCTTGGAACTATGATGTGGGTAGCATACATAAAGTGGCGATGAACAC
AACGATGCTTCCATAGGAGGCAGGACAAGGTCACCGCGCTTATGCCTCTTCAAGGTCGATCTCAACCCTTCGCTCATT--
--------------------GAAGTGGCCCGAAGATGATTGCGAGAGAGTTTCAACAACAAGGAGGACATAGTAGTTATC
TCTATCTAGTATCCATGTTCGTCACA
>chr1A_613
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CTTAGACAAAAAGAAATCTGAAACAGCTTATATTCAGCAACACCCTTAAGCTTTGCATGCGTTCACGCTTGGTCCATTTA
TGTCCTATGCTTGAGGAGGT-AGAGGTGTTTTATGAGCAGCGCGCAAGATTCACTCAGAGATCATGTTCCAAGAGTTCTT
CACTCAGTATAGACAGATATGTTTTTGAAAAGTTATAGATAGAAATGCAACAACCAGCTAGGCCTAGATTTGGCCTATAA
AAGTCCAATAATTTCCAGTTTGCAC--GTCCATTGAACATGTGG--AAAAAACTGTGGGTAGTGATGCATTCTGTGCGTC
GAACTTTATTATCCTGCTCACCCACTT-GCTGGCGTGCATGCATAGCAGATTGCCAAGCAAGGTGCTAAATCTACGCCTA
TAAATAGATGTGCTACTAGCTCTGGCCAACAACAACAA---CAACATAGCATTCCACTCACAAC-AATAAGAGATAAGTG
AG--AGCTTTGCTC--AAAAACCTTAAAAACAACCATGAAGAACACCAAGCTTGTGGCGATCCTTCTCCTCCATGCCATC
CTGGTCATGGGAATCCTTGCACACGTGAATGGTTC----GTGGTCTTTCATG-TTCTTTATTCTATTTTTTGCA-TAACA
AACTTTGATTGTCCTTTTGCAATTCCATTGATGTCTTATATATCTTATAAGTGATT-ACTAATATGATAGCATGCCATGC
ATGCGTGCAGCCAACTACTTCCCCAAGTGTTGTGACAAATGTAGGTCGTTCTCGGGGGTTGACATATGTGACGACGCCCA
TCCTCAGTGCCCCAAGGGCTGCTCCACATGCCGCGCGGTGCAGACGGGCCGTGTCAAGACGTTCCGATGTGCCGACATGC
GCTCCACCATCAACGGCACGTGCGGCCCACGCTGCAAGAA-GAACTGACCGGTTCAAGCAAGAATTAGGAGATGTGTTTC
GCCAAAAAT-AAAGCTCAGATGAGACGAGCATTGTGACCGT-TTTTGTGCATAGATGTGGCCCCACATTGCATGCCGACA
ATGCATACACTATTGTCGGTCGCCGTCGTT--------------------------------------------------
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>chr1D_624
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-----------AATAATCTCAAACAGCGTATATTCAGCAACACCCTTAAGTTCTACACGTGTTCACACTTGGTCCATTTA
TGTCCTATGCTAAGGAGGCT-AGAGGTGTTTTATGAGCAGCGTGCAAGATTCATTCGCACCGCATATTCCAAGAGTTCTT
CACCAAGTATAGACAAAGATGTTTTCGAAAGATTATAGATAGAGATGCAACAACGAGCTAGGCCTAGATTTGGCCTATAA
AAGTCCAATAATTTCCAGTTCGCACATGTCCATTGAACACGTGG--AAAAAACTGTGGGTAGTGGTGCGCGCTATGTGTC
AAACTGTATTATCCGGCTCACCCACTTTGATGGCGTGCAGGCATAGCAGATTGCCAAGCAAGGTGCTAAATCTACGCCTA
TAAATAGATGTGCT-CTAGCTTTGGCCAACAACAAA------AACATAGCATTCCACTCACAAC-AA--AGAGGTAAGT-
-GAGAGCTTTGCTC--GAAAACCATAAAATCAACCATGAAGAACACCAAGCTCGTGGCGATCATTGTCCTCCATGCCATC
CGGGTCATGGGAATCCTTGTACACGTGAATGGTCGGTTTGTGGTTGTTCATG-T--TTTATTCTATTTCTTTACCTAAAA
AAGTTTGATTGCCTTTTTGCAATTCCATTGATGTCTTATATATCTTATAAGTGGTT-CCTAACATCATACCATGCCATGC
ATGTGTGCAGCCGACTACTTCCCCAAGTGTTGCGACAAATGCAGGTCGTTCTCGGGGGTCGACGTATGTGACGACGCCCA
TCCTCAGTGCCCCAAGGGATGCTCCGCATGCCGGGCGGTGCAGACGGGCCGTGTCAAGATGTTCCGGTGCGCCGACATGC
GCTCCACCATCAACGACACATGCGGCCCGCGCTGCAAGAA-GAACTGACCGGTTCAAGCTCGAATCATGATAATCGTTTC
TCCAAAAAT-AAAGCTCAGATAGGATGAGCACTGTCACCGTATTTTGTGCGTACATGTGGCCCCACATTGCACGCCGATA
ATGCATACATTGTTGTCAGTCGCCGTCGTT--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>chr1D_971
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-----------------------------------------------AGATTGCCAGGTAAGGTGCCAAATCTATGCCTA
TAAATGGAGGCGCTTCTAGCTCTAGAAAACAACAACTA---CATCTA--CACTCCACTCCATAGTCATATGAGATAAGT-
-GATACAATTTTATGTGAAAGCCGTAGAAGCAACAATGAAGAACATCAAGCTCATGGCAATCCTTGTTCTCCAGGCCATC
CTGGTCATGGGAATCCTCGCACATGTGAATGGTTC----GTTGTTGTTCATGCTTATATATTCTATTTCTTCCCTGAAGA
AAGTTTGATTTCTTTTTTGTGATGTCAATGTGGCCTTATGTATCTTATAAGCCATTAACTAACGTGATGCCATGCCATGA
ATGCTTGCAGCCAACTACTTCCCCAAGTGTTGCGACAAATGCAGGTCCTTCTCAGGGGTGGATATCTGTGACGACACCCA
TCCTCAGTGCCCCAAGGGCTGCTCCACGTGCCGCCCGGTGCAGACGGGCAGTGTCAAGATGTTCTAGTGCGCCGACATGC
GCTCCACCATCAATGGCACATGCGGTCCACGCTGCAAGAA-GAACTAATAGGTTCAACCTCGGATCAAGAAATGTGTTTC
GCCAAAAAT-AAAGCTCAGATGAGATGAGTATTGTCGCCGT-ATTTGTTCGTACATGTAGGCCCACATTGCATGCCAACA
ATACATGCG-TGTTGTCGGTCGCCGTCATTTCATCGCCATTGTTCTTGTTTTTAATTTCCTTTTTCGAGAGTAGTCTGTT
GTTGCTCGCCTATCAGGTGCCCGGTGTATCCTCCCTGAATAAACACCCGCGTTAATTGTGTGTCTCCGCTTAAAATACAT
TTGTTCATGTCACACAATTTT-----------------------------------------------------------
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>chr1B_1638
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-----TGTACTATTATCGGTCGTCGTCGTCGTCGTTG---TTG------TTTCTATTTACCTCTTCGAGACTAAGATGTT
GTTGTTCACCGATCAGGTGCTCGTTCTATCCTCTGTGAATAAACACGTGTGTTAATTGTGCATCTCTGTTTAAAGAGCAT
TTGTTCATGTCACACGAATTTTGCGAGCAAGTAGTGTCTAAACGTCGGTATGCTTTTATACATAGTAAATAACTCTTATC
GTCCTGCTCTTTTATCATTTCTTTGCCAGCATTTAAACTCTATGTCTACTAAACTGTTATTAACATTCGGAGTGCTCAGG
CTATATGTGGCTCTATCTTCATAGTCTACACATGTATATAAAACAATAATTTCATTGGACCTACTTACGTCTATACAAAT
GAAAATACGGAAGGAACACAACATAGTTGTTCACGTGTACCGCCCTTAAGAAGGTGCGAGAACCATCTTTGTCGCT-CCC
CGATCTCACTCTCATACATCCAAGAGCGGGTGCCCTCCTCAATGGATAACAACGGCAACAAGAAGCTTGACGAGGTATGT
TGGTGGTGACCATCCACTACAAATCCGACGTTGACAGGTAGGGTGTGGACATCGATGATGTGCCTATAAATCGC------
---------------------------------TTTCCTTGGGTAGATGTCATCGCTTGAACATATTGTGTGATCTTGTT
AATATGGATGCAA--CATGTTCTTCTTGGAAAACCTTGGAAGTAT-----------------------------------
--------------------------------------------------------------------------------
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--------------------------
>chr1B_1676
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-------------------------------------------------------TTTACCTCTTCGAGACTAAGATGTT
GTTGTTCACCGATCAGGTGCTCGTTCTATCCTCCGTGAATAAACACGTGTGTTAATTGTGCATCTCTGTTTAAAGAGCAT
TTGTTCATGTCACACGAATTTTGTGAGCAAGTAGTGTCTAAACGTCGGTATGCTTTTATACATAGTAAATAACTCTTATC
GTCCTGCTCTTTTAACATTTCTTTGCCAGAATTTAAACTCTATGTCTGCTAAACTGTTATTAACATTCGGAGTGCTCAGG
CTATATGTGGCTCTATCTTCATAGTCTACACATGTATATAAAACAATAATTTCATTGGACCTACTTACGTCTATACAAAT
GAAAATACGGAAGGAACACAACATAGTTGTTCACGTGTACCACCCTTAAGAAGGTGCGAGAACCATCTTTGTCGCT-CCC
CGATCTCACTCTCATACATCCAAGAGCGGGTGTCCTCCTCAATGGATAACAATGGCAACAAGAAGCTTGACGAGGTATGT
TGGTGGTGACCATCCACTACAAATCCGACGTTGAGAGGTAGGGTGTGGACATCGATGATGTGCCTATAAATCGC------
---------------------------------TTTCCTTGGGTAGATGTCATCGCTTGAACATATTGTGTGATCTTGTT
AATATGGATGCAA--CATGTTCTTCTTGGAAAACCTTGGAAGTAT-----------------------------------
--------------------------------------------------------------------------------
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--------------------------
>SNPs
--SS-S--------------------------------------------------------------------------
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------------------------------------------------------------------S--------S----
---S------------------S-------S----------------------------------S------S-------
--------------------------------------------------------------------------------
---S--------------------S-------------S----SSS----------------------------------
-------------S------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-----------------------S--------------------------------------------------------
---------------------------------------S---S-----------------------------------S
----------------------------------S-----------------------S-----------S---------
---S-------------------------------------------------------------S--------------
-----------------------------S--------------------------------------------------
----------------S-----------------------S-------------------------S-------------
------------------------------------S-------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------S--------------------------------------------------------S--
------S----------------------------S-------------------------------------S------
---------------------------------------------------------------SS------S--------
---S---------------------S----------------------------------------------------S-
--------------------------------------------------------------------------------
-----S----------------------------S--------S------------------S-----------------
------------------------S------------------------S-------------------------S----
S----------S--------------------------S----S----------S---------------------S---
-----------------------S---S-----------S----S---------------------S------S------
-------------------------------------------------SSS------------------------S---
-------------------------------S-----S---------------S--S--------------------S--
--------------------------------------------------------------S-----------------
--------------------------------------------------------S--------------S--------
---------------------------S---------------------------SS-----------S-----------
S--------S------S---S---------------S---S-----------------------------SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------S---S-------S-----------S-----------------
--------------------------
>forward_3747
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-----------------------------------------------AGATTGGCAAGTAAGGCGCA-------------
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--------------------------
>reverse_5285
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----TAAACCTTCGCCCAGGGAAG--------------------------------------------------------
--------------------------
