>input_sequence_75942
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-------------------------------------------------------------------------------A
TGCCATTCCCGCATCCAGCAGCCCACAGCCCAGCGCCACCGCCGTCGCATCCATGGCCGTCGGGGGGATCTTCAAAGGAT
GACTCCGCGTCTCAAGGTGGGATCATCGCTGGCCTCGTCATCGGCTTCGTGGCCTCCTTGCTCCTCTTCACCGTGGCGTG
GAGCGTCTTCAAGGGGCACCGCAACAGCCGCGCTCGCGCCCGCGCCGCGGCCGCGGCCGCCGCTCGGCCGTGGCCACCGC
CGGAACCTTACCGCCCACGCAGCGACGAAGATCGGCATCGCCGAAGCGCCAGCGACCCCAGCCAGACGGCCCGTCTGCCG
GCGTTCA-------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
GTACAGCCCGTCCGTGAAGCACAACGTGGCGGGCGGCGGC---GAGGAGGCGGCGACGTGCTCGGTGTGTCTCGGCGCGT
TCCTGCTCGGTGAGACGGTCCGGCTGCTGCCGGTGTGCCTGCACCTCTACCACGTCGGGTGCATCGACCCCTGGCTGGAC
GCGCACTCGACGTGCCCGCTCTGCCGCTCCGACACCGACCCGACGATCGACGCCGTCCGGATACTGCCTGTTTAG-----
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>chr7D_1_TraesCS7D01G331900
CAAACAAGACGGCGCCTTGATGAAGGAGAACGACGCCGAGGCGCCGTCGCCGTCCGATCCGAAAAGCCGGACCTAGGGTT
TTCCCTGACGCTCGAAGAGGGGCACAGATAGCAGCCATGACCGTGCCTCCAAGAAGGAAACGGAACCCATAGGTAACAAG
-GGATCATAGGAATATCATTTGTTTTCTGGCTAAAAATGATTAGAGATTAGCTCGAAACCGTTATGGCTTAACCTCTAAC
TCGGATCAAATAAAGCTTACCTGTTTTATCAACTTATCCAAGCTGACTTTAGCCTAAATCGCTCAAGCTGGACCTTTGAT
CCCTGTCCTCCAACAGGGAGAAAAGATTCACCTCGTAATTTGGCATAAAATTCCATACTACACAATCTGATTGGATGACG
ACGGTGAGGTGAATCTTTTGATGGAATTTGATTGTTCACTCAGTGACGTCGATGGCCCAGCTTACATATGTTTGCACATT
GCCTAAAACCGCTCATATTCATTACCAGTCAACATTAACATTCCCATAAACAGCTCCAAGCCTTCATCTTTCATCTGCTA
ATTGTTTATGTCCACCCGGCCCCATCCGAAGACGGTCGCGACTATATATCGCACTTGGCAGATTGTAGCAGCCGCACCTA
CGTCGATCCGCAAGTTCCAAGAACAATACAACCGTCTCACATATGCCATTTCACTAGGAATTAAGCTAGCAAAACAACCT
AGATGCAGGGCTCCTTTCCACACGCTGATTTTTAACTAGTTTCC-------------------ACACGAAGGACCTTGAC
AACGTTACCGTACCGGCGCCGGCCGCACAAACAAACGAAACCGTGCCAGTTAAGTCCGCGATTTCCCCTTCCTTGGACGC
GCATTTGGCACCCTATCGGCGACCATGATTGGCCTCAGCATAC-----------CAGCTGCGTCGATCCGGGAGGTATGA
TTTGCTAAAACTCGTATTATAAAACCATACACCACACAAACAGTAGC--------TAGTTTGGAGTCGCGCTTGCACCAA
TGCCATTCCCGCATCCAGCAGCCCACAGCCCAGCGCCACCGCCGTCGCATCCATGGCCGTCGGGGGGATCTTCAAAGGAT
GACTCCGCGTCTCAAGGTGGGATCATCGCTGGCCTCGTCATCGGCTTCGTGGCCTCCTTGCTCCTCTTCACCGTGGCGTG
GAGCGTCTTCAAGGGGCACCGCAACAGCCGCGCTCGCGCCCGCGCCGCGGCCGCGGCCGCCGCTCGGCCGTGGCCACCGC
CGGAACCTTACCGCCCACGCAGCGACGAAGATCGGCATCGCCGAAGCGCCAGCGACCCCAGCCAGACGGCCCGTCTGCCG
GCGTTCA-------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
GTACAGCCCGTCCGTGAAGCACAACGTGGCGGGCGGCGGC---GAGGAGGCGGCGACGTGCTCGGTGTGTCTCGGCGCGT
TCCTGCTCGGTGAGACGGTCCGGCTGCTGCCGGTGTGCCTGCACCTCTACCACGTCGGGTGCATCGACCCCTGGCTGGAC
GCGCACTCGACGTGCCCGCTCTGCCGCTCCGACACCGACCCGACGATCGACGCCGTCCGGATACTGCCTGTTTAGGCCTT
CGTTCTGCCGGCGAGTGGCGTAGATACGTGAGGTATAGCCGCA-GCACTACTGTAAAGATTCGCGAGGATAGTTGGAGTG
TACACTCATGCATTTATTTTGCTGGAGATTATTA-TT-TTACGACGTAGTACGACTTTGTCTC----AAACTCTCAATAC
ATTGCTTGGTATCAAGGCCTCCTCGGTTTTGAACCAAAATTTGGCATTGCCTTTTATCAACAGTTGCCGAACTCAGACTT
TGCCAACA-TTAGAAACTTTGGCTAGTCATCATTGGTTGGCAGAACTGGCGCCCAATGAATAATAAACTACCAAAACTTT
CTTAGGTTGCCAGAGAATTGGCTTCCCAAAATTTAGAACCACTAGCACCGTGACCCATGCATGTACGGTAACATCTTGCA
AAATGATTAGTAAAATATTATTTACAAAAATATGCATACATGTACGGCATTTGTGTCTAGATGCCATATAAAAAAAATCA
CTGTACCATGGCATTTTTTAGTGTACATAACACGACAATTTTAGTAATTTTTGCCATGTGTTTATATGACTCAACATTCC
TAAATTACAATTTACAAACTTGTTCTACGTTTACCTTGCTTTATACATCACCAGCAAAAGGGCCCGCGCGCGTTGAAACG
GGAGAAAAAAATATCCTCTCATATCTCTAGCTGTGGGTCAGTTCAATAAACTGTGTGTGGCCGTTTACCAGGTTATGAGA
TCGAACCTTCCCATCAACAATTTTATTTTTTGCCAGTTCTCCGGACCTGGGCCACGTGCGCCATCGGGTGGGCTTCATCC
GTTGAGCCAAAACAGGTGGCAAGTAACGAAACCAAATAGCATACATGAAATTAATTGAAATGGGACCAAACGAAGCGGGA
CGAAACCAAGAATATCACCTCCCTTTAATAGTAGGTATAGATTGCAATTGTTCTACGAAACTTGTTCTAACTTAAAACAA
ATTTCAACAATATTTGCCATGGAAATTGTTGTTTGTACTGCTC
>chr7B_146
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-----------------------------------------------------------------CCCGTAGGTAACAAA
TGGATCATAGGAAGATCATTTGTTTTCTGGCTAAAAATGGTTAGAGATTAGCTCGAAACCGTTATAGCTTAACCTCTAGC
TCGGATCAAATAAAGCTTACCTGTTTTATCAACTTATCCAAGCTGAGTTTAGCCTAAATCGCTCAAGCTGGACCTTTGAT
CCCTGTCCTCCGACAGGGAGAAAAGATTCACCTCGCAATTTGGCATAAAACTCCATACTACACAATCTGATTGGATGACG
ACGGTGAGGTGAATCTTTTGATGGAATTTGATTGTTCACTCAGTGATGTCGATGGCCCAGCTTACATATGTTTGCACATT
GCCTAAAACCGCTCATATTCATTACCAGTCAACATTAACATTCCCATAAACAGCTGCATGCCTTCAGCTTTCATCTGCTA
CTTGTTTATGTCCACCCGGCCCCATGTGAAGACGGTCGCGACTATATGTCGCACTTGGCAGATTGTAGCTGCCGCATCTA
CTTCGACCAGCAAGTTCCAAGAACAATACAACCGTCTCACATATGCCATTTCACTACCAATTAAGCTAGCAAAGTAGCCT
AGATGCAGGGCTCCTTTCAACATGCTGATTTTTAACTAGTTTCC-------------------ACACGAAGGACCTTGAC
AACGTTACCGTACCGGCGCCGGCCGCACAAACAAACGAAACCGTGCCAGTTAAGTCCGCGATTTCCCCTTCCTTGGACGC
GCATTTGGCACCCTATCGGCGATCATGATTCGCCTCAGCACAC-----------TAGCTGCGTCGATCCGGGTAATAC--
TTTGCTAAAACTCGTATTATAAAACCATACACCACACAAACAGTAGC--------TAGTTTGGAGTTGCGCTTGCACCAA
TGACATTCCCTCGTC---AAGCCCACAGCCCAGCGCCACCGCCGTCGCACCCATGGCCGTCGGGAGGATCTTCAAAGGAT
GACCCCGCGTCTCAAGGTGGGATCATCGCTGGCCTCGTCATCGGCTTCGTGGCCTCCTTGCTCCTCTTCACCGTGGCGTG
GAGCGTCTTCAAGGGGCACCGCAACAGCCGCGCTCGCGCCCGCGCCGCGGCGGCGGCCGCCGCTCGGCCGTGGCCACCGC
CGGAACCTTACCACCCACGCAGCGACGAAGAGCGGCAGAGCCGAAGCGGCAGCGACCCGAGCCAGACGGCCCGTCTGCCG
GCGTTCA-------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
GTACAGCCCGTCCGTGAAGCACAACGTGGCGGGCGGCGGC---GAGGAGGCGGCGACGTGCTCGGTGTGCCTCGGCGCGT
TCCTGCTCGGAGAGACGGTCCGGCTGCTGCCGGTGTGCCTGCACCTCTACCACGTCGGGTGCATCGACCCGTGGCTGGAC
GCGCACTCGACGTGCCCGCTCTGCCGCTCCGACACCGACCCGACGATCGACGCCGTCCGGATACTGCCTGTTTAGGCCTT
CGTTCTGCCGGCGAGTGGCGTAGATACATGAGGTATAGCCGCA-GCACTACTGTAAAGATTCGCGAGGATAGTTGGAGTG
TACACTCATGCATTTATTTTGCTGGAGATTATTTTTT-TTACGACGTAGTACGACTTTGTCTC----AAACTCTCAATAC
ATTGCTTGGTAT--------------------------------------------------------------------
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>chr7A_514
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----------------------------------TTAACATGTCCATTACCAGCTGCATGACTTCATCTTTCATCTGCTA
ATTGTTTACGTCCACCCGCCTCCATCGGAAGACGGTCGTGACTATATACCGCACTTGGCAGATTGTTGCTGCCGCATCTA
CTTCGACCAGCAACTTCCAAGAACAATACAACTA--TCACATATGCCATTTCACTACCAATTAAGTAAAACTAG------
-----------------CTAGATGCTGATTTTCAATTAGTTTTCGCATCACATTCACACGATGACACGAACGACCTTGAC
AACGTTGCCGTAGCGTCGCCGGCCGCACAAACAAACGAAACCGTGCCAACTAAGTCCACGGTTTCGCCTTCCTTGAGCGC
GCATTTGGCAATGTATCGGCAAGTAGCCCCTTGTCCGCTGGACTGGCTTCAACGTAGCTGCGCTGATCCT---GGTATAA
TTTGCTGAAACTCGTATTACAAAAGCATACAGCAAAGAAACAGTAGCTAGCTAGTTAGTTTGGAGTTGCACCTGCACCAA
TGCGATCCCCCTTTC---CAGCCCACAGCCCAGCGTCACCACCGTCGAATTCATGGCCGTCGGGAGGATCTTCAAAGGAT
GACTCCGCGTCTCAAGGTGGGATCATCGCTGGCCTCGTCATCGGCTTCGTGGCCTCCTTGCTCCTGTTCACCGTGGGGTG
GAGCGTCTTCAAGGGGCACCGCAACAGCCGCGCTCGCGCCCGTGCTGCGGCGGCGGCCGCCGCTCGGCCGTGGCCACAGC
TGGAACCTTACCGCCCACGCAGCGACGAAGAGCGGCAGCGCCGAAGCGCCAGCGACCCCAGCCAGACGGCCCGTCTGCCG
GCGTTCA-------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
GTACAGCTCGTCCGTGAAGCACAACGTGGCGGGCGGCGGC---GAGGAGGCAGCGACGTGCTCGGTGTGCCTCGGCGCGT
TCCTGCTCGGCGAGACGGTTCGGCTGTTGCCGGTGTGCCTGCACCTCTACCACGTCGGGTGCATCGATCCCTGGCTGGAC
GCGCACTCGACGTGCCCGCTCTGCCGCTCCGACACTGACCCGACGGTCGACGTCGTCCGGATACCGCCTGTTTAGGCTTT
CGTTCTGCCGGCGAGGGGCGTAGATACGTCAGGTATAGCCGCATGCACTACTGTAAAGATTCGCGAGGATAGTTGAAGGG
TACGTTCATGCATTTATTTTGCTCGAGATGATTTTTTGTTACGACGTAGTACGGCTTCTTTGTCTCAAAACTCTCAATAC
ATTG-TTGGTATCAAGGTCTCCTTGGTCTGGAACCAAAATTTAGCATTGCCTTTTATCAAAATTTGCCGAACTCAAATGT
TGCCAACATTTAGAAACTTTGGCG-----TCATTGGTTGGCAGAATTGCAGACCAATGAAT---AAACTACCAAAACTTT
CTTCGGTTGCCAGAGAATTGGCTTGCCAAAATTTATAATCATTAG-----------------------------------
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>chr7A_1299
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---------------------------------------------------------CCAGCCCGACGGCCGGGCTCCCG
GCGTTCACGTACAGCCTGTCGGTGAAGCACAACGTGGCGGGCGGAGGGGAGGAGGCAGCGACGTGCTCGGTGTGCCTCGG
CGCGCTGCAGGTCGGCGAGACGGTGCGGCTGCTGCCGGCGTGCCTGCACCTGTACCACGCCGAGTGCATCGACCCGTGGC
TGGACGCGCACTCGACGTGCCCGCTCTGCCGCTCCGACACCGACCCGGCCGCTGTCTAGCTAGATGCACATTTTGACGGG
TGTTAGTTTGCTGGATTGATTTTGCTTGCTGTATATATTCAAAAATACGTCTACTCAGTTGTCTGGGCAACATAAGACAG
GAATCTTCAAATGATGCATCTGTCCTATTTGCAAGTATTTGTGGACGTCCTCAGGGTCATTTGGTCTCCAATGTCTTGTC
TTGAAGATCTCACTCTCCCGGCTTTGTCTTTGTGGAAACCTTCGAATTATACGGTTCCCCAGTAGAACTGTTGAGATCGT
CCGCAATGGCTTCGCCCAACCATATGAAAGGGGACCTTTATAAATGTCACACGTACGATACAAACACATGGCAACTTTGA
ACGTTTTTTATAATAAATACAGTGACGCGAGGATGGCAATTTTAGTTGTCAAGCATGGCAACTTCCTTTTCAAATGACAA
GTTTTAGTATTTTTTAGTTAGTTTTTTCTTTTCGGATGGTAGTTTTATTTAGTTGTAAAAAACGCCATGACCGGAGTGCT
TCGTGCCACAAGTGTGACACTTATCATTTGGGCTGAAATAAGGATCATGTGTGTGTCATTATGTAGAAGGGATGCAATTT
TCGCTTCTAATTGGACTTGGGTATGTCCGTAGTTCACCTACACTCGCACCTTTCCTCCAGCCTGAGCGAAGCCCATGACA
TAGACAGCAGCAGTGCCACGACGTCGCTTGGTATCGTGCCGCGATTTCCCTTCCATTAAACGCGCATTTGACAATGAATC
GGCAATCAATTAACTAACCCCTTTGACCACAGGCTTGCAAGTAGGAGTGGTTGATTTTATCCGCTTATAATTCTTCCCCG
ACAGAGTCTGCTTATACTGCTTAAACCATACCACAAGCAACAGTTGCGCACGACGAGCATCAGTGGCTCAATCGCCCCCG
GGCTTCGTCCCCATTGTCACCTCTCCCCCTCCACCGCGGTGGCCATTCCATCCTTCACTACCGCCGCCGCCGTCCAATGC
TAGGCCATCGTCTACCCAAGGCAGGATACTGGCCGGCCTCCTCATCGGCGTCGTGGCGTGCTTGATCGTGTTCACCGCCG
TGTGCACCCTCTGCAGGGAGTACCGCGACCGCCGCGCTCGAGCCGCGGCCGCCGCTTGGCGGTGGCCCGTGCCGGAACGC
AATGGCGTGCGCGTCGTTGGCGAGCGGCAGCTTGGCCGGGCCTACGCCGCCAGCCCCACGGCCGGCCTCCCGGCGTTCAC
GTACAGCCCGTCCGTGAAGCGCAACATGACGGGCGGCGGGGAGGAGGAGGCGGCGACGTGCTCGGTGTGCCTCGGCGCGC
TGCAGCTCGGCGAGACGGTGCGGCTGCTGCCGGCGTGCCTGCACATGTACCACGCGGAGTGCATCGACCCCTGGCTGGAC
GCGCACTCGACGTGCCCGGTCTGCCGCTCCGACACCGGCCCG--------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S----------S
-------------S-------------------------S-------------------------S------------S-
----------------------------------------------S---------------------------------
-----------S-----------------------S--------------S-----------------------------
----------------------------------------------S---------------------------------
-------------------------------------------------------S--S---------------------
--------------------------S------------------------------------------S------S---
-S----S-S-----------------------------------------------SS---------------SS-S---
------------------S---S---------------------------------------------------------
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----------------------S-------S---------S-------------S-----------------S-----S-
------------------------------------------------------------------S-------------
----------S-S--SSS----------------------------------------------S---------------
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---------------------------------------------------S----------------------------
-------------------------------S-----S------------------------------------------
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---------------------------------------------------------------------S----------
----------S---------------------------------------------------------------------
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---------------------------------S----------------------------------------------
-----------------S-----S---S-S------------S-----------------S-S------------S-SS-
-----------------------SSSSSS----------------S--SS-S---------SSS----------------
---S--------------------S----------S--S--S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_136
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------------------------------------ATGACCGTGCCTCCAAGAAG------------------------
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>reverse_3406
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---------------------------------------------CACCGTGACCCATGCATGTA---------------
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