>input_sequence_75835
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----------ATGCTGTCTCTGCAGGAGGCGATCGGCCTTGACATGGACGCGATGACGTCCGGGTTCGGGTTCACCCCGT
GGGAGGCCGACACGTGCCCCACCCTGGAGGAGCTCATGGCGGCGTCGTCCACTTCGTCCCCCAGCTCGTCCGGCGGGGCG
GTCGCGGACCAGGCGGCGGGGCTGGTGGAGGACGAGGAGGAGCGCCGGCGGCGGCAGCGGCGGAAGGTGTCGAACCGGCT
GTCGGCGCAGCGGTCGCGGGCGCGCAAGCAGCAGCGCCTGGAGGAGCTCCGCGGGACGGTGGCTCGCTTCCGCGTCGAGA
AGCGCGAGCTGGCCGCCAAGCTACACGCCGTGGCGCGGCACGAGCTCGCCGTGCGCCGCCAGAACGCGCGGCTCCGCGCC
GAGGCCGCGGTGCTCGCGCGCCGGCTCCGCGAGGCGCGCCGCCTCCTCGCGCTGCAGCGGCTCATGCAGCAGCTCCGGTC
GCGTCGCCCGCAGCCGGGCGCTGGCAGCGGTCCGGGAGGAGCCGCCTTCCCGCCGGCGGCAGAGCTGGGGCTGGCTTCCC
TCATGACCTACTAG------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G415300
TTCGATCGCCACACACGTATAGCCCCCAAGTACCACGCGTACGTACGTGTACATACTTGTGCAGTGGATGCTTTAAAA--
----AGATTCATCCATGCCTACGTGCGTACT-----ACTTATTTACCACGTGACGCATTAGCGCATTGTAGCCCACTGTG
CAAGTGTAAGTGGCATCGTGACAGCAGCATGCACAACACAACACAACACCCACACGTA--GTAGTCAGCTAGCTAGCGCC
TAGCGGTTGAGACA------------------AAGCCCGTGTCCCTCCCGCTGCTGATCGTGCTAACGTGGCGGTCGCCC
AGCCGCGTACGAGATCCTGGGTCGCCATGGGTTGCCACGCCGGCGCCGGCGGGTCCCGGCGAGCAGTGGCCCACGGAGCG
GCGCCCAATGGGACGTCCCCACAAGTGCGCGGGCAC-TGC----------ATGCAGTTGCACCCCAGCCATCGATGCGCA
GCATCTCGCGGCCATTACTTCGCGATTAAGCTAAAACGCG-CCCCCCACCCCAC--------------------------
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----------------------------------------------------CCCACCTGGACCTACGCGGGCCCGCGAC
CCACGTTGCACCAACCGAGCACCCACGCAAAAGGAGGGGGCGCGCCACGTGGGCCCGCATGGGCTTGCATGCCCGATCCG
CCGTCCATTGACGCCGCTGGGCTCATCGGCGCCGTCCGTGCCGCGAAGACGGGAGCACGTGGGGAGGTTTATACGGGCCC
GGCTGGGGATTGGATACACTGTCACAGCCGTAGAATCTTTACCCGCCGAGAAGAAAAAGGCGGC----AACGAAAGCCAC
CGGGACGAAGGAAGAAGAAGCCTCACGTAAACGCAGGACCCGCGT----GGTGGGTTGCGGGCCCCGCGGCGAGGGAGGC
TCGACGGCCCGGCTCGGCCCGCGCCGGGTCTATAAATAGCGCCAGTTTCCTCATCGCTTCTTCCCTTTTCCCCGATCCCT
CTCTCAAGT-CCCCTAGATTCCCGGAATTACGGTTTTGTCCTTCATTTTGTTGTGGTTGTTAGCGTTAAGTGTCAGGAGA
AAGAAAGAAAATGCTGTCTCTGCAGGAGGCGATCGGCCTTGACATGGACGCGATGACGTCCGGGTTCGGGTTCACCCCGT
GGGAGGCCGACACGTGCCCCACCCTGGAGGAGCTCATGGCGGCGTCGTCCACTTCGTCCCCCAGCTCGTCCGGCGGGGCG
GTCGCGGACCAGGCGGCGGGGCTGGTGGAGGACGAGGAGGAGCGCCGGCGGCGGCAGCGGCGGAAGGTGTCGAACCGGCT
GTCGGCGCAGCGGTCGCGGGCGCGCAAGCAGCAGCGCCTGGAGGAGCTCCGCGGGACGGTGGCTCGCTTCCGCGTCGAGA
AGCGCGAGCTGGCCGCCAAGCTACACGCCGTGGCGCGGCACGAGCTCGCCGTGCGCCGCCAGAACGCGCGGCTCCGCGCC
GAGGCCGCGGTGCTCGCGCGCCGGCTCCGCGAGGCGCGCCGCCTCCTCGCGCTGCAGCGGCTCATGCAGCAGCTCCGGTC
GCGTCGCCCGCAGCCGGGCGCTGGCAGCGGTCCGGGAGGAGCCGCCTTCCCGCCGGCGGCAGAGCTGGGGCTGGCTTCCC
TCATGACCTACTAGGATGGAATGAAGGAGGGCGCGGGTGGTCACGACCCATGACCACGGACGGAGGTCACATCACGTGTG
AAAGTTTTGGAACGGATGACGACGAGAGTACTACGTGCGTGAATGAACCGGGAGCACTCACTACTGGTGC-----TTTAA
GCAGCTGCATGCAATGCTAG----------GGACCCGTGCTTA-TTTAGTTGACGCGTAGGCTGCATATATATAATTAAG
TACTACTCTACATGAATGAATGGATCGTCCGTCACCTGATGTAAATT---ACTAAATGGAAAACTACTGCCGTTTTGGCA
CCGTACGTGAAGAGCCCGACTGATTCACCGCTCACTCTGACCAAAATGCTCGTCGGCATGTGCGCAGGTTGACGCACCGG
TCTCTCTGTTTT-ACAATGGATTATCTAACGTCGACAGCC-------GTGAGAGCCTTTAGGCTAAACGGAAAAGATGCA
CGTCTGCATTTTTTATCCCCTGATTCACCGCTCAGCGTACTGCAGATTCACTGTGTGACCATACGAAAATGGTCGTCGGC
ATGTGCGCAGGTTGACGTACCCGGTGTCTCTGTTTCTCCGCTGCTTATTTAACGGTGCATGACACTACGCCGTCTCTTGT
CGATAGTGGGAGCCTTTAGGCCAAACGGAAAAGATGCGCGGCCTCTTTTCTATCGGATATCCTGGCGGGCCATGGTGTAA
CGTGAGCTTCTCCGCTTTAGTGAAAACAAAGAATAGGCCGTAGTGATAGAATTTGACAGAGACAGATCACTGACTTACTA
AGCAAAGGTGGCCGACTGGCCAGCAGCCTTGAATCGAACAAGTAGGGCAAAGGCAAGAGCTTAAAAAGGAGGG-CAAGAG
ATATGCTAGC---TAGAAGACTTGATGTTGCAGTTCAACAGTTGCGTCCAGGTTCCATTGATCTAAAGGGTTAGAGCAAC
TTCAACAGCCCCTAA---ACATAGTCCCCAGTCCCCTAAGCAGCTTTTAGAGGTTGGGGGCGAAAGAAAGGAAAAGCAAG
ATGCCAAG
>chr5A_1
TTCGATCACCACACACGTATAGCCTCCTAGTACCACGCGTACATACGTGTACATACTTGTGCAGTGGATGCTTTAAAA--
----AGAACCATCCATGCCTACGTACGTACTTACGTACTTATTTGCCACGTGACGCATTAGCGCATTGTAGCCCACTGTG
CAAGTGTAAGTGGCCTCGTGACAGCAGCATGCACAACACAACGCAACACAAAACCCACACGTAGTCAGCTAGCTAGCGGT
--------------------------CAAGACAAGCCCGTGTCCCTCCCGCTGTTGGTCGGGCTAACGTGGCGGTCGCCC
GGCCGCGAACGAGATCCTGGGTCGCC----------ACGCCGGCGCCGGCGGGCCCCGGCGAGCAGTGGCCTACGGCGCG
GCGCCCAATGGGACGCCCCCACAAGTGCGCGGGCACGGCACTGCATGCAGATGCAGTTGCACCCCAGCCATCGATGCGCG
GCATCTCGCGGCCATTACTTCGCGATTAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACCTGGACCTACGCGGGCCCGCGAC
CCACGTTGCACCAACCGAGCACCCACGCAAAAGGAGGAGGGGCGCCACGTGGGCCCGCACGGGCATGCATGCGCGATCCG
CCCTCCATTGCCGCCGCTGGGCTCATCGGCGCCGTCCGTGCCGCGAAGACGGGAGCACGTGGGCAGGCACATACGGGCCC
GCCTGGTGATTGGATATACTGTCACAGCCGTAGAATCTTTACCCGCCGAGAAGAAAAAGGCGGCCAAGAAAGAAAGCCAC
CGGGGCGAAGGAAGAAGAAGCCTCACGTAAATGCAGGACCCGCGTCGTGGGTGGGTTGCGGGCCCCGCGGCGAGGGAGGC
TCGACGGCCCGGCTCGGCCCGCGCCGGGTCTATAAATACCGCCAGTTTCCTCATCGCTTCTTCCCTTTTCCCCGATCCCT
CTCTCGAGCCCCCCTAGATTCCCGGAATTACGGTTTAGTCCTTCATTTTGCTGTGGCTGTTGGCGTTAAGTGTCAGGGGA
AAGAAGGAAAATGCTGTCTCTGCAGGAGGCGATCGGGCTTGACATGGACGCGATGACGTCCGGGTTCGGGTTCACCCCGT
GGGCACCCGACACGTGCCCCACCCTGGAGGAGCTCATGGCGGCGTCGTCCACGTCGTCCCCCAGCTCGTCCGGCGGCGCG
GT---GGACCAGGCGGCGGGGCTGGTGGAGGACGAGGAGGAGCGCCGGCGGCGGCAGCGCCGGAAGGTGTCGAACCGGCT
GTCGGCGCAGCGGTCGCGGGCGCGCAAGCAGCAGCGCCTGGAGGAGCTCCGCGGGACGGTGGCTCGCCTCCGCGCCGAGA
AGCGCGAGCTGGCCGCCAAGCTGCACGCCGTGGCGCGGCACGAGCTCGCCGTGCGCCGCCAGAACGCGCGGCTCCGCGCC
GAGGAGGCCGCGCTCAAGCGCCGGCTCC---------ACCGCCTCCTCGCGCTGCAGCGGCTCACGCAGCAGCTCCGGGC
GCGCCGTCCGGGGCCGGGCGCTGGCAGCGGGCCGGGAGGAGCCGCCTTCCCGCCGGCGGCAGCGCTGGGGCTGGCTTCCC
TCATGACCTACTAGGAGGGCGC--------GCGCGGGTGGTCACGACCCATGGCCACGGACGGAGGTCACATCACGTGTG
AAAGTTTTGGAACGGATGGCGACGAGAGTACTACGTGCGTGAATGAACCGGGAGCACTCACTACTGGTGCTTTGCTTTAA
GCAGCTGCATGCCATGCTAC----------GGACCCGTGCTTATTTTAGTTGACGTGTAGGCTGCATATATATAATTAAG
TACTTA-CTACATGAATGAATGGATCGTCCGTCACCTGATGTAAATTATTACTAAATGGAAAACTACTGCCGCTTTGGCA
CCGTACGTGAAGAGCCCGACTGATTCACCGCTCACTCTGACCAAAATGCTCGTCGGCAAGTGCGTAGGTTGACGCACCGG
TCTCTCTGTTTTCACTCTGGATTATCTAACGTCGACAGCC-------GTGAGAGCCTTTAGGCTAAACGGAAAAGATGCG
CGTCTTCATTTTCTATCCACTGATTCACCGTCAGCGTACGTACAGATTCACTGTGTGGCC-----AAAATGGTCGTCGGC
ATGTGCGCAGGTTGACGTACCA-GTCTCGCTGTTTTTC----GCTTATTTAACGGTGCATGACACTACGCCGTCTCTTGT
CGATCGTGGGAGCCTTTAGGCCAAACGGAAAAGATGCCCGGCCTCTTTTCTATCGGATATCCTGGCGGGCCATGGCGTAA
CGTGAGCCACCCCGCTTTAGTGAAAACAAAGAATAGGCCGTGGTGATAGAATTTGACAGGGACAGATCACTGAGTTACTA
AGCAAAGGTGGCCGACTGGCCAGCAGCATTGAATCGAATAAGTAGGGCAAAGGCAAGAGCTTAAAAAGGAGGGGCAAGAG
ATATGCTAGC---TAGAAGACTTGATGTTGCAGTTCAACAGTTGCTTCCAGATTCCGTTGATCTAAAGGGTTAGAGCAAC
TTCAACAGGCCCCTAAACACATAGTCCCCAGTCCTCTAAGCAGCTTTTAGAGGTTGGGGGCGAAAGAAAGGAAAAGCAAG
ATGCCAAG
>chr5B_16
---------------CGTATAGCATCCTAGTACCACGCGTACATACGTGTACATGCTTGTGCAGTGGATGCTTTAAAAGT
TTAAAGATTTATCCATGCCTATGTACG------------TATTTACCACGTGACGCATTAGCGCATTGTAGCCCATT---
---GTGTAAGTGGCATCGTGACAGCAGCATGCACAACACAACGCCCACGCCCTGGTAGTCAAGCTACGTGCAGCCGCTCA
AAAAAAAAAGGAAAGCTAGCTACGTGCAAGACAAGCTCGTGTCCTTCCCGCTGTTGATCGTGCTAACGTGGCGGTCGCCC
AGCCGCGAACGAGATCCCGGGTCGCC----------ACGTCGGCGCCGGCGGGTCCCGGCGAGCAGTG-CCTACGGCGCG
GCGCCCAATGGGACGTCCCCACAAGTGCGCGGGCACCTGC----------ATGCAGTTGCACCCCAGCCATCGATGCCCA
GCATCTCGCGGCCATTACTTCGCGATTAAGCTAAAATGCGCCCCCCCACCCCAC--------------------------
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----------------------------------------------------CCTACCTGGACCTACGTGGGCCCGCGAC
CCACGTTGCACCAACCGAGCACC-ACGCAAAAGGAGGAGGGGCGCCACGTGGGCCCGCATGGGCTTGCATGCGCGATCCG
CCGTCCATTGACGCCGCTGGGCTCATCGGGGCCGTCCGTGCCGCGAAGATGGGAGCACGTGGGCAGGTTTATACGGGCCC
GGCTGGGGATTGGATACACTGTCACGGCCGTAGAATCTTTACCCGCCAAGAAGAAAAAGGCGCC----AAAGAAAGCCAC
CGGGGCGAAGGAAGAAGAAGCCTCACGTAAATGCAGGACCCGCGT----GGTGGGTTGCGGGGCCCGCGGCGAGGGAGGC
TCGACGGCCCGGCTCGGCCCGCGCCGGGTCTATAAATAGCGCCAGTTTCCTCATCGCTTCTTCCCTTTTCCCCGATCCCT
CTCTCAAGT-CCCCTAGATTCCCGGAATTACGGTTTTGTCCTTCATTT-GTTGTGGTTGTTACTGTTAAGTGTCAGGAGA
AAGAAAGAAAATGCTGTCTCTGCAGGAGGCGATCGGGCTTGACATGGACGCGATGACTTCCGGGTTCGGGTTCACCCCGT
GGGAGGCCGACACGTGCCCCACCCTGGAGGAGCTCATGGCGGCGTCGTCCACTTCGTCCCCCAGCTCGTCCGGCGGGGCG
GTCGCGGACCAGGCGG---GGATGGTTGAGGACGAGGAGGAGCGCCGGCGGCGGCAGCGGCGGAAGGTGTCGAACCGGCT
GTCGGCGCAGCGTTCGCGGGCGCGCAAGCAGCAGCGCCTGGAGGAGCTCCGCGGGACGGTGGCTCGCTTCCGCGCCGAGA
AGCGCGACCTGGCCGCCAAGCTGCACACGGTGGCGCGGCACGAGCTCGCCGTGCGCCGCCAGAACGCGCGGCTCCGCGCC
GAGGCCGCGGTGCTCGCGCGCCGGCTCCGCGAGGCGCACCGCCTCCTCGCGCTGCAGCGGCTCATGCAGCAGCTCCGGTC
GCGTCGCCCGCAGCCGGGCGCTGGCAGCGGTCCGGGAGGAGCCGCCTTGCCGCCGGCGGCAGAGCTGGGGCTGGCTTCCC
TCATGACCTACTAGGAGGGAATGAAGGAGGGCGCGGGTGGTCACGACCCATGACCATGGACGGAGTCACAT--ACGTGTG
AAAGTTTTGGAACGGATGGCGACGAGAGTACTACGTGCGTGAATGAACCGGGAGCACTACTGG---------TGCTTTAA
GCAGCTGCATGCCATGCTACACTATGCTAGGGACCCGTGCTTATTTTAGTTGACGTGTAGGCTGCATATATAATTACTAA
GTACTA-CTACATGAATGAATGAATA-TCCGTCACCTGATGTAAATT---ACTAAATGGAAAACTACTGCCGCTTTGGCG
CCGTACGTGAAGAGCCCGACTGATTCACCGCTCACCGTGACCAAAATGCTCGTCGACAAGTACGCAGGTTGACGTACCGG
TCTCTCTGTTTT-ACTCTGGATTGTCTAACGTCGACTGCCGTGAGAGGTGAGAGCCTTTAGGCTAAACGGAAAAGATGCA
CGTCTTCATTTTTTATCCACTGATTCACCGTCAGCGTACGTGCAGATTCACTGTGTGACC-----AAAATGGTCGTCGAC
GTGTGCGCAGGTTGACGTACCCGGTCTCTCTGTTTTTGCTCTGCTTATTTAACGGTGCATGACACTACGCCGTCTCTTGT
CGATCGTGGGAGCCTTTAGGCCAAACGGAAAAGATGCGCGCCCTCTTTTCTATCGGATATCCTGGCGGGCCATGGTGTAA
CGTGAGCTTCTCCGCTTTGGTGAAAACAAAGTATAGGCCGTGGTGATAGAATTTGACAGAGACAGATCACTGACTTACGC
AGCAAAGGTGGTCGACTGGCCAGCAGCCTTGAATCGAATAAGTAGGGCAAAGGCAAGAGCTTAAAAAGGAGGG-CAAGAG
ATATGCTAGCGAGTAGAAGACTTGATGTTGCAGTTCAACAGTCGCTCCCAGATTCCATTGATCTAAAGGGTTAGAGCAAC
TTCAACAGGCCCCTAAA--CATAGTCCCCAGG-CCCTAAGCAGCTTTTAGAGGTTGGGGGCGAAAGAAAGGAAAAGCAAG
ATACCAAG
>SNPs
-------S----------------S--S--------------S-------------------------------------
------------------------S-------------------------------------------------------
------------------------------------------S---------SS-SSS---------------------S
S-SSSSSSSS--S----------------------------------------S--------------------------
-------S------------------SSSSSSSSSS-----------------------------------S----S---
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------------------------------------S-------------------------------------------
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------------------------------------------------------S-------------------------
-------------------------------------S--S-------------------------------S-------
---------------------------------------------------------------S----------------
----------------------------------------------------------------------S---------
----S--------------------------S------------------------------------------------
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------------------------------------S-------------------------------------------
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--------------------------------------------------------------------------S-----
----------------------S---------------------------------------------------------
-------------------------------------S------------------------------------------
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----------------S---------------------------------------------------------------
------------------S-------------------------------------------------------------
------------S------S-----------------------------------S------------------------
----SSS-----------------------------------------------------------------S-------
----------------------------------------------------------S---------------------
---------------SS---------------------------------------------------------------
-----S------------S-----------SSSSSSSSSS--------------------SSSSS---------------
-------------------------S---------S---S----------------------------------------
----S---------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------S-----------------------------------------
---------------------------------------------S-----S----------------------------
--------S---SS------------------------------------------------------------------
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>forward_216
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------------------------------------CACAACACAACACCCACACG------------------------
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>reverse_2506
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-------------------------GTCTCTGTTTCTCCGCTGCT-----------------------------------
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