>input_sequence_75822
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---------------------------------------------------------ATGAAGAGGGCCACGTCGACGTG
GTTCCATGCGCAGGCGGCGGCGGCGGCGGCGGCGGG---AGCGGAGGACGACCTATTGCTGGCGTTGACGCCGGCGGGCA
GAAGGCTAGACCGGTACGACGAGCAAGCC------CAGACGGTGTGCGTGGACGGCAAGACGGTGCGGCTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTTGGCGGCCACCAGAACGCGCACCGCAAGGACCGCCTCGCCGG
AGTCCTCGGCGACCCCTACAACA---ACGACAGCCTGTTGGGAGGT---------------GCCGCCACCGGGCCGTCCT
GCGATTCTGCTGCCGGCTGGTCCATGTGCACTTACATCGCCTCGCACGGCGGTGGCGCCGCGGT---GGCTCCA------
GCCACCGATGACTCCAGGCAAGAGAGGTGGG---G---AGGCGGCCGCGCTCCACGCTTCGCAGAGCCCGCGCCGCTCCT
GGACCCGTCCACTGGCCGCGACGGCGTGATGAGCCGGTCAAGGGCCTCCGTCCCTAGCGGCGGCG---------GC--GG
CGGCGAGGCGCCGGACCTCGAGCTGCACCTCTAG----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------
>chr4B_1_TraesCS4B01G342300
CATGCTCCTATTGCAAGAACTTCCACCTAAATTTG--ATGGAATTTGTTAGTATGGCTTGCTGGAATATCTGGACGCAGA
GGAACTTTAAGATTTTCAAACCTGAGGCACCTTCCATCTTCTCATGGAAGAGACTACTCAGGAATGACCTCTTGCTGGTC
AAGCATATAATCAACAGAAAGAATCAAGAGACCTTCCTTAACTGGATTGATCATTATCTTGCTTAAGCTCCCATGAACAT
TTTAGGCTATCCTAGAACTG--GTGTTTCTTAAGTTTTGTTCATTTTGAGCTTCTATGCTTTTTGTAATTCTTTGTACAT
ATTACTTTTTTATTTATAATATA-------------------TAC------------------GGTTCATGTTCAAGAA-
-AATCACTATGTCGAGGAAGAAAAAAAA-TAG--TGTTGCTAAATTTATTTATTTTTTTGAGCATCAGTACAGACACAAG
CGCTCATATACGCGCATACACTCACCCCTATGAATGCACACACGCACACACGCACACCTATCCCTATGAGCACCTCCGAG
AGACTGAGCCGGCATATCATCTTAAGATTTACGAAGCCACCGTAGGCGCCTCGTCGTCGACGGGAACGTCTCCTCCCACT
AAAAGCGCATCGCCGGAAATCTTGAAATAAATTCAAATATAATGCGAGCATCAAGATTTGAACCCTACTAGGTTGGGGAT
CACATTCGTCCAAATCGAAAGTT-GCAAATCCGAGATGTAGTTTTGCATAATTGCAGGACCCACGTGTACTGCACCGGTT
GTTTGGAATTTTCTTTCAACCACTTCCTCCGCAATGATCTCCTCTCCGGGGTACGGTGACTCGCTTGACTTTAATATCGG
CACCGCACCCCGCACTACTGTAGAACCTCTCTG-TTTTCTCACTTGGGAATAT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TTCGTAGTGGTGTTAGCCGTCGAATCCCATCGAGAAGTCCATATATAGGATTGCCGCTGCTGCC
AATCCT---AGCAGCAGCAGCTACCTTGGCATACAT---ATAATATTATAAACCTCGATGAAGAGGGCCACGTCGACGTG
GTTCCATGCGCAGGCGGCGGCGGCGGCGGCGGCGGG---AGCGGAGGACGACCTATTGCTGGCGTTGACGCCGGCGGGCA
GAAGGCTAGACCGGTACGACGAGCAAGCC------CAGACGGTGTGCGTGGACGGCAAGACGGTGCGGCTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTTGGCGGCCACCAGAACGCGCACCGCAAGGACCGCCTCGCCGG
AGTCCTCGGCGACCCCTACAACA---ACGACAGCCTGTTGGGAGGT---------------GCCGCCACCGGGCCGTCCT
GCGATTCTGCTGCCGGCTGGTCCATGTGCACTTACATCGCCTCGCACGGCGGTGGCGCCGCGGT---GGCTCCA------
GCCACCGATGACTCCAGGCAAGAGAGGTGGG---G---AGGCGGCCGCGCTCCACGCTTCGCAGAGCCCGCGCCGCTCCT
GGACCCGTCCACTGGCCGCGACGGCGTGATGAGCCGGTCAAGGGCCTCCGTCCCTAGCGGCGGCG---------GC--GG
CGGCGAGGCGCCGGACCTCGAGCTGCACCTCTAGCTATCTAGCGTCGCCAGGCCGGCTGCTGC-----CATTCATATTGC
ACAGGTGACACCAATGAATTCATCTACTACTCG-----------------------------------------------
--------------C-----------------------------------------------------------------
-------------------------------------TCTTATCGATCTCTCTGTTGATTACTATAATTAATTAGATCCT
C---------------------------CAACCTAGCTTAATTAACCAACTTGGCGATTAATCTCTGTGTAGGTGTCGTC
GACGAAAACATTCAAGGAACAAATATAATCGTCTGTGTCGCCGATCGAACTTG-TAGCGACACGTCCGCTGCTCTTGGTA
CATTTGTGTTCTTGCGTGATATTGTAGGCAGCTAGC-----------------CCGTTAATATTCATCTCGTGATAAAAT
AATTGTTAATTTTTTTTTTGCGAGTCCTCGTACATCAATCCGTACCGCATGTAATAACGGCTCGA--CCGTAATAATATC
AGTGCACCTGTTGCTTCCCCGTTCTTTTGC-TGTCCGGTTTTGCTATTCCTCTGACAACCGATTTTTT-TTAATCTATTG
---ACAGAGAGAGGAAATCCATT-GAAAATACA-----AT----------------------------------------
-------------------------------------ATTTTGAGACGATTGATCTATAGGTGATTCTTGTTTTTACTGC
TGTAGGATATTATTATTTTTTT-----GCCTCACAAGCTCATGTACGCACTCTAATGGATGGACCAAACAAGTATACCAT
CTGTTGCTTCTTCTGCA--------------------------------TATG-TTACTGCACCCATGTGATTCGAGGAA
TCGAGGAGACACTCCGTACGATGTGCTAAAGTAGTATGCGACAAAAGAACGTACGGTCGTGCAGGGGAGTTGTGCAGTGA
CTCGGATGGC-AGTGGGCCGATCC--------ATTATATGCTCGACGTGTCGACCCCCACTGTTTGTTTTGTTTTGGGAC
CGACAGGCTGTTTGCTCAGTTTTGGACCGACAAGCTCTTTGTTCTCTTGCCCGCATACACTACGAAATACTTTTTATAGA
TTTATATACTCCCTCCGTTAAAAAAAAACTTGTCCCAAGCTGACACTGAAATGAATGTATCTAGCACTAATTTGATATAG
ATACATCCATTTAAGGGAGAGAGG
>chr4D_1
CATGCTCCTATTGCAAGAACTTCCACCTAAATTTGCCATGGAAATTGTTAGTATGGCTTGCTGGAATATCTATGCGGAGA
AAC----TAAGATTTTCAAACCTAAGTCACCTTCCATCCTCTCATGCAAGAGACTAATCAGGAATGACCTCTTGCTTGTC
AAGCATAGAATCAACAGAAGGAATCAAGAGACCTTCCTTAACTGGACTGATCAATATCTTACTTAAGCTCCCATAAATAT
TTTAGGCTTTCCTAGAACTTGTGTGTTTGTTAAGTTTGGTTCATTTTGAGCTTTTGAGCCTTTTGTAATTCTTTGTACAT
ATTACTTTTT-ATTTATAATATA-------------------TACATAAAACAATTATTCTATGGTTCATGGTTCAAATA
GAAGCACTATGTCGAGGAAGAAAAAAAA-TAGAGTGTTACTAAATGTTTATTTTATTTTTATT-----TTTTATCTTGCT
AAACTGGAAAACAAACT----TGAATTATTTTTTGGTGGACAACA--AACTCTGAGTTAG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GGGGAT
CAGATTCGTCCAAATAGAAAGGTAGCAAATCCGAGATGCAATTTTGCATAATTGTAGGACCCTCATGTACTGCACCGGTT
GTTTGGGATTTTCTTTCAAGCACTTCCTCCAGGATGAGCTGCTCTCCGGGGTCCGGTGACTCGCTTGACTTTAATATCTG
CAACGCAACCCGCACTACTGTAGAACCTCTCTGATTTTCTCACTTGGGAAGAT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TTAGTAGTGGTA-TA----------CCCATCGAG-AGCCCATATATAGGATCGCCGCTGCTACC
AATCTT---AGCAGCAGCAGCTACCTTGGCATACAAA-AATATTACTATAAACCTCGATGGAGAGGGCCACGACAACGTG
GTTCCATGCGCAGGCGGCGGCGGTGGCGGCGGCAGCAGCAGCGGAGGACGACCTATTGCTGGCGTTGACGCCGGCGGGCA
GAAGGCTAGACCGGTACGACGATCAAGCG------CAGACGGTGTGCGTGGACGGCAAGACGGTGCGGCTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCACTCGGCGGCCACCAGAACGCGCACCGCAAGGATCGCCTCGCTGG
AGTCCTCGGCGACCCCTACAACA---ACGACATCCCGTCGGGAGG-----------------------------------
----------TGCCGGCTGGTCCATGTGCACTTACATCGCCTCGCACGGCCGTGGCGCCGCCGT---GGCTCCA------
GCCACCGATGCCTGCACGCAAGAGAGATGGG---G---AGGCGGCCGCGCTCCACGCTTCGCGGAGCCCGCGCCGCTCCT
GGCCCCGTCCACTGGCCGCGACGGCATGG---GCTGGTCAAGGGCCTC---------------TGGCGCTAGCAGC--GC
CGGCGAGGCGCTAGACGTCGAGCTGCACCTCTAGCTG-------------------------C-----CTTTGATATTGC
ACAGGTGAAACTAATCAGTTCATCTACTACTCGCTCTCTTTTTTTAAAGCAAAAGAGGATCACCTCCGGCCTCTGATACA
TATTTTACTGGATGC-----------------------------------------------------------------
-------------------------------------TCTTATCGATCTCTTTGTTAATTGCTATAATTAACTGGATCCT
CCAATCTAGCTCACTTTTTATTTGCGGGTAATCTAGCTCAATTAACCAACTTTGTGATTAATCTCCATGCAGGTGTCGTC
GATGGAAACATTCA-GGAACAAATATAATCGTCTGTGTCGGCGATCGAACTTG-TATAGCCACGTCGGCTGCTCTCGGTA
AATTTGTGTTCTTGCGTGATATTGTAGGCAGCTAGCTGGCATTGTGGTTTCACCCGTTA--ATACATCTCGTGATAAAAT
AATTGTTAATATTTTTTT-GCGAGTCCTCGTACATCAATCTGTACCGCATGTAATAACGGCTCGA--CCGTAATAATATC
AGTGCACCTGTTGCTTCCCCGTTCTT--GC-TGTCCGGTTTTGCTATTCCTCTGACAACTGATTTTTT-T-AATTTATTG
---ACAGAGAGAGGAAATCCATT-AAAATTACA-----AT----------------------------------------
-------------------------------------ATTTGCAGACGATTGATCTATAGGTGGTTCTTATTTTTACTGC
TGTAGGTTT------TTTTTTTTTTTTGCGTCACAAGCTCATGTACGCACTCTAATGGATGGACCAAACAAGTATACCCT
CTGCTGCTTCTTCTGCA--------------------------------CATG-TTACTGCACCCATGTGAT--------
TCGAGGAGACACTCCGTACGATGTGCTAAAGTAGTATGCGACAAAAGAACGTACGGTCGTGCAGGGGAGTTGTGCAGTGA
CTCGGATGGC-AGTGGGCCGATCG--------AC-ATATGCTCACCGTGTCGACCCCCGCTGTTTGTTTTGTTTTGGGAC
CGACAGGTTGTTTGCTTAGTTTTGGACCGACAAGCTCTTTGTTCTCTTGCCCGCACACACTACGAAATGCTTTTTATAGA
TTTATA--------------------------------------------------------------------------
------------------------
>chr5A_1
CATGCTCCTATTGCAAGAACTTCCACCTAAATTTG--ATGTAATTTGTTAGTATGGCTTGCTGGAATATCTGGACGCAG-
---------AGATTTTCAAACCTGAGGCACCTTCCATCTTCTCATGGAAGAGACTACTC---AATGACCTCTTGCTGGTC
AAGCATAGAGTCAACAGAAAGAATCAAGAGACCTTCCTTAACTGGATTGATCAGTATCTTACTTAAGCTCCCATGAATAT
TTTAGGCTTTCCTAGAATTG--GTGTTGGTTAACTTTGTTCA---------TTTTGAGCTTTTTGTAATTCTTTGTACAT
ATTACTTTTTTATTTATAATATATACCATAGAACGATCGTTCCAC------------------GGTTCATGGTTCAAAA-
-AATATTATGTT----GAGGAAGAACAAATAG--TGTTGCTAAT-----------TTTTTTAT-----TTTTGTGTTGCT
AAATTGGAAAACAACAAACTCTGAATTATATTTCAGTGGACAACACAAATTCTGAGTTA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GGGGAT
CAGATTCGTCCAAATAGAAAGTTAGAAAATCCGAGATGCAATTTTGCATAATTGTAGGATCCACATGTACTGCACCGGTT
GTATGGACTTTTCTTTCAAGCACTTCCTCCACAAAGAGCTGCTCTCTGGGGTCCGGTGACTCGCTTGACTTTAGTATCTA
CACCGCACCCCACACTACTGTAGAACCTCTCT-ATTTTCTCACTTGGGAAGAT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TCAGTAGTGGTA-TA----------CTCATCGAG-AGTCCATATATAGGATCGCCGCTGCTACC
AATCTT---AGCAGCAGCAGCTACCTTGGCATACAAA-AATAT---TATAAACCTCGATGGAGAGGGCCACGACGACGTG
GTTCCACGCGCAGGCGGCGGCGGCGGCA---------GCAGCGGAGGACGACCTATATCTGGCGTTGACGCCGGCGGGCA
GAAGGCTAGACCGGTACGACGAGCAAGCG------CAGACGGTGTGCGTGGAGGGCAAGACGGTGCGGTTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGACCGCCTCGCCGG
AGTCCTCGGCGACCCCTACAGCA---ACGACAGCCCGTTGGGAGGT---------------GCCGCGACCGGGCCGTCCT
GCGATTCTGCTGCCGGCTGGTCCATGTGCACCTACATCGCCTCGCACGGCCGTGGCGCCGCGGT---GGCTCCA------
GCCACCGATGCCTGCACGCAAGAGAGATGGG---G---AGGCGGCCGCGCTCCACGCTTCGCTGAGCCGGCGCCGCTCCT
GGACCCGTCCACTGGCCGCGACGGCATGG---GTCGGTCAAAGGCCTC---------------TG---------GC--GC
CGGCGAGGCGCTGGACCTCGAGCTGCACCTCTAGCTAT-TAGCGTCGACCGGCCGGCTGCTGA-----ATTTCATATAGC
ACAGGTGACGCTAATCAGTTCATCTGCAACTC------------------------------------------------
-------------GCTTTCTTTTTTTAGA--AAAGCAGGATCACCACAGGCTTCC---GCATCACAACGATGCACACAAC
CATATTCTATTAAAGTTCAAGAATGTCTTGTACTTGTTCTTATCGATTTCTTTGTTAATTGCTATAATTAACTGGGTCCT
CGAAC---------------------------------CAATTAACCATATTTGTGATTAATCTCCTTGCAGGTGTCGTC
GACGGAAACATTCA-GCAACAATTGTAATCGTCTGTGTCGGCGATCGAACTTGGTATCGCCACGTCGGCTGCTCTCGGTA
TATTTGTGTTCTTGCTTCATATTGTAGGCAGCTAGCTGGCATTGTGGTTTCACCCGTCAATAGTCATCTCGTGATAAAAT
AATTGTTAATATT------------CCTCGTTCATCAATCCGCACGGCATGTAATAACGGCTCAAT--CGTAATAATATC
AGTGTACCTGTTGCTTCCCCGTTCTTC-TTTTGTCCGGTTTTGCTATTCCTCAGACAATTGAATATTT-TTAATCTAACG
GTTACCGATAGAGGAAATCCATTGAAAATTACAGTACAAT----------------------------------------
-------------------------------------ATTTTCAGTCGCTTGATCTACGGTGGTTCTTATTTTTCACTAC
AATC--------------------------------GCTCATGTATGCACCCTAATGGATGGACCAAACAAGTATAGCTC
CTGATGCTTAATATGGTAATGTAGTTTCAACGGTTTCTCCTAGATACTGTATG-TTACTGCACCCATGTGAT--------
TCGAGGAGACACTCCGGACGATGTGCTAAAGTAGCATGCGACACAAGAACGTACGGTCCTGCTGTGGAGTTGTGGAGTGA
CTTGGATGGC-AGTGGACCAACTAGTACTACTACTATATGCTAGTCGTGTCGACCTCCGCTGTTTGTTTCGTTTAGGGAC
CGGCAGGCTGTTTGTTTAATTTTGGACGGACGAGTTGTTTGT--------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr4D_137
CAT-----------------------------------------------------------------------------
-------------------------------------------------------------GAATGACCTCTTGCCGGTC
AAGCATATAATCAACAGAAAGAATCAAGATATCTTCCTTAACTAGATTGATCATTATCTTACTTAAGCTCCCATGAACAT
TTTAGGCTTTCCTAGAACAG--GTGTTTCTTAAGTTTGGTTCATTTTGAGCTTCTGAGCTTTTTGTAATTCTTTGTACAT
ATTACTTTTTTATTTATAATATATACGTAGAACG--TTGTTCTAC------------------GATTCATGTTCAAGAA-
-AAGCACTATGTCGAGGAAGAAGAAAAAATAG--TGTTGCTAAA-----------TTTTTATTTTATATTTTGTGTTGCT
AAATAGGAAAACAACAAACTCTGAATTATTTTTCGGTGGACAACA--AA--------TAG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AGGGAT
CAGATTCGTCCAAATAGAAAGTTGGCAAATCCGAGATGTAGTTTTGCATAATTGCAGGACCCACGTGTACTGCACCGGTT
GTTTGGAATTTTCTTTCAAGCACTTCCTCCACAATGAGCTCCTTTCCGGGGTCCGGTGACTCGCTTGACTTTAATATCTG
CACCGCACCCCGCACTACTGTAGAACCTCTCTC-TGTTTTCTTATTTTAGGCCTTGTTCGGTTTGGAGTATTTTCATAGA
AAATACATAGGAACAAGAATTTCAGAGGAAAATTTTTTATAGATGCATTTGGTTTGTAGAAAAGGCGTACGGGAATATCG
TAGGAATACTACTTATTTCCTGTGTTTTTTAACGAAACTAGACATCCATTAAAAGCTTATTCTACACGCAGAAACAAGGC
AAGTCAATTTTTTAGAATGACAAGTGCCATCCTAATTCCTATCAAATTTCTATACTAGTCATAATTCCTTTAGTTTCCTC
CCAACCGAACGAGCCCTTAGCAGTGGTACTACCTATCGAATCCCATCGAG-AGTCCATATATAGGATCGCCGCTGCTACC
AGTCCT---CGCAGCAGCAGCTACCTTGGCATACATATAATAT---TATAAACCTCGATGGAGAGGGCCACGTCGACGTG
GTTCCATGCGCAGGCGGCGGCGGCGGCG---------GCAGCGGAGGACGACCTATTGCTGGCGTTGACGCCGGCGGGCA
GAAGGCTAGACCGGTACGACGAGCGAACC------CAGACGGTGTGCGTGGACGGCAAGACGGTGCGGCTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGACCGCCTCGCCGG
AGTCCTCGGCGACCCCTACAACA---ACGACAGCCTGTTGGGAGGT---------------GCCACCACCGGGCCGTCCT
GCGATTCTGTTGCCGGCTGGTCCATGTGCACTTACATCGCCTCGCACGGCGGTGCCGCCGCGGT---GGCTCCA------
GCCACCGATGACTCCAGGCAAGAGAGGTGGG---G---AGGCGGCCGCGCTCCACGCTTCGCGGAGCCCGCGCCGCTCCT
GGACCCGTCCACTGGCCGCGACGGCGTGATGGGCCGGTCAAGGGCCTCCGTCCCTAGCGGCGGCG---------GCAAGG
CGGCAAGGCGCCGGACCTCGAGCTGCACCTCTAGCTATCTAGCGTCGCCGGGCCGGCTGCTGC-----CATTCATATTGC
ACAGGTGACACCAATGAATTCATCTACTACTC------------------------------------------------
-------------GC-----------------------------------------------------------------
-------------------------------------TCTTATCGATCTCTTTGTTGATTGCTATAATTAATTAGATCCA
C---------------------------CAACCTAGCTTAATTAACCAACTTTGTGATTAATCTCTATGTAGGTGTCGTC
GACGAAAACAT-CAAGGGACAAATATAATCGTCTGTGTCGCCGATCGAACTTG-TATCGACACGTCCGCTGCTCTTGGTA
TATTTGTGTTCTTGCGTGATATTGTAGGCAGCTAGCTGGCATTGTGGCTTCACCCGTTAATATTCATCTCATGATAAAAT
AATTGTTAATATT------------CCTCGGTCATCAATCCGCAGTTCATGTAATAACGGCTCGA--CCGTAATAATATC
AGTGTACCTGTTGCTTCCCCGTTCTTCATTTTGTCCGGTTTTGCTATTCCT--GACAACTGAATATTTCT-AATCTAACG
-----GTTAAGAGGAAATCCATTGAAAATTACA-----ATCGAGACTCGACCTGGTTATAAAGCGAAGCGAGCCGTCCTT
CCTTTCATTCATTGTGTTGTCTTCGGTTTGTTTTTAAATTTTCAGTCGCTTGATCTACAGTGGTTCTTATTTTTTACAAT
AT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TCCGTACGATGTGCTAACGTGGTATGCGACAAAAGAACGTACGGTCGTGCAGTGGCGTTGTGGACTGA
CTCGGATGGC-AGTGGACG----G--------ACTATATGCTGGCCGTGTCGACCTGCGGTGTTTGTTTCGTTTTGGGAC
CGACAGGCTGTTTGTTTAATTTTGGACCGACAAGTTGTTTGT--------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr5A_669
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------GGGGAT
CAGATTCGTCCAAATAGAAAGTTTGCAAATCCGAGATGCAATTTTGCATAATTGTAGGACCCATGTGTATTGCACCGGTT
GTTTGGAATTTTCTTTCAAGCACTTGCTCCACAATGAGCTGCTCTGCGGGGTCCGGTGACTGGCTTGACTTTAATATCTG
CATT-----CCGCAATACTGTAGCACCTCTCTC-TTTGCTCACTTGGGAAGAT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TTAGTAGTGGTA-TAGCCATCGAATCCCATCGAG-AGTCCATATATAGGATCGCCGCTGCTACT
AATCCTAGCAGCAGCAGTAGCTACCTTGGCATACATATATTAT------AAAACTCGATGGAGAGGGCCACGTCGACGTG
GTTCCATGCGCAGGCGGCGGCGGCGGCA---------GA---GGAGGATGACCTATTGCTGGCGTTGACGCCGGCGGGGA
GAAGGCTAGACCGGTACGACGAGTAAGCG------CGGATGGTGTGCATGGACGGCAAGAGGGTGCGGCTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACC-------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr4D_995
--------------------------------------------------------------------------------
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---------------------------------------------------ACCTCGATGGAGAAGGCCACGTCGTCGTG
GTTCCATGTGCAAGCGGCAGCGG---CGGCGGCGGT---GCCGGAT------CTGTCGCTGGCGTTGTCCTCAGAGGACA
GCAGCCAAGACCGGGACGAGGAGGTTGCA------CCGACGGCGCGCGTGGACGGCAGGACGGTGCGGCTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCCCACCGCAAGGACCGCCTCGCCGG
CTTCCTCTGCGACCCCTACAACAGCAACGACAGCCCATCCAGGGGCGCCGCCGTCGCGGGGGCGTCCACCAGGATGACCT
GCGATTCAAGCGCCGGCCGGTCCATGTGCACTTCCGTCGCCTCGCACGGCGGTGGCG---TGGAGGCGGCGCCA------
GCCTCCGATGCCTGCAAGCCAGAGAGGTGGGGGCG---AGGCGGTGGCGCTCCACGCTTCGCGGAGCACACGCTGCTCCA
GGACCCGTTCGCTGTCCGCGACGGCATGGCGGGCTGGTCAAGGGCCTCGTTCGCAA------GTG---------GC--GC
CGGCGAGACTCTGGACCTGGAGCTGCGCCTCTAGC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr5A_995
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ACCTTGATGGAGAAGACCACGTCGTCGTG
GTTCCATGTGCAAGCGGCAGCGGCGGCG---------GCCTCGCCG---GATCTGTCGCTGACGATGTCCCCAGCGGACA
GCAGCCAAGACCGGAACGAGGAGGTGGCA------CCGACGGCGCGCGTGGACGGCAGGACGGTGCGGCTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCCCACCGCAAGGACCGCCTCGCCGG
CTTCCTCTGCGACCCCTACAACA---AGGACAGCCCATTCGGGGGCGCCGCCGTCGAGGGGACTTCCACCGGGACGACCT
GCGATTCAAGCGCCGGCCGGTCCATGTGCACTTCCGTGGTCTCGCACGGTGGTGGCG---TGGAGGCGGCGCCA------
GCCTCCCATGCCTGCAAGCCAGAGAGGTGGG---GGCGAGCCGGTGGCGCTCCACGCTTGGCGGAGCACACGCTGCTCCA
GGACCCGTTCCCTGGCCGCGACGGCGTGGCGGGCTGGTCAAGGGCCTCCGATGCAA------GTG---------GC--GC
CGGCGAGGCTCTGGACCTGGAGCTGCGCCTCTAGC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr4D_1045
GGCA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGCGGCGG---CGGCGGTGGT---GCCGGAT------CTGTCGCTGGCGTTGGCGCCGGCGAGCA
GCAGCCAAGAGCGGGACGAGGACCCT------GTTCCGATGGCGTGCGTGGACGGCAAGCCGGTGCGGCTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGGCCGCCTCGACGG
CCTCCTCTCCGACCCCTACAGCA---ACGACAGCCTGTTCGGAGGCGCCCCCGTCGCGGCGGCGTCCACCGGGCCGTCGT
GCTATTTTG------------------GCACCTCCATCGTCTCGCACGGCGGCGCTGGCGTGGC---GGCGGCGCCAACG
GCCGCCGATGCCTGCAGGCCAGAGAGGAGGG---GGTTGGGCGGCAGGGCTCCGCGGTTCGCGGAGCACGCGCTGCCCCT
GGACCCGTATGCTGGAGGCGACGGGGTGGTGGGCTGGCCAAGGGCCTCCGTCGCAA------GCG---------GC--GC
CGGCGAGGCGTTGGACCTCGAGCTGCGCCTTTAGCTA----GCGTCGCCTCGCTGGCTGCTGCGCTGCCACTCATATCGC
ACAGGT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr5A_1045
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GGCGGCGGCGGCGGT---GCCGGAG------CTGTCGCTGGCGTTGGCGCCGGCGGGCA
GCAGCCAAGACCGGGAGCGGGACGAAAAACCGGTTCCGATGGCGTGCGTGGACGGCAAGCCGGTGCAGCTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGGCCGCCTCGACGG
CCTCCTCTCCGACCCCTACAGCA---ACGACAGCCCATTCGGAGGCACCGCCATCGCGGCGGCGTCCACCGGGTCGTCGC
GCTATTTTG------------------GCACGTTCATCGTCTCACACGACGGCGCTGGCGTGGCGGCGGCGCCA------
ACCGTCGATGCCCGCTGGCCAGAGAGGAGGG---GGTTGGGCGGCAGGGCTCCGCGGTTCGCGGAGCAGGCGCTGCCCCT
GGACCCGTATGCTGGAGGCGACGGCGTGGTGGGCCGGCCAAGGGCCTCCATCGCAA------GCG---------GC--GC
CGGCGAGGCGTTGGACCTCGAGCTGCGCCTTTAGCTA----GCGTCGCCTTGCTGGCTGCTGTGCTGCCGCTCATATCGC
ACAGGT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chrUn_1045
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GGCGGCGGCGGCGGT---GCCGGAG------CTGTCGCTGGCGTTGGCGCCGGCGGGCA
GCAGCCAAGACCGGGAGCGGGACGAAAAACCGGTTCCGATGGCGTGCGTGGACGGCAAGCCGGTGCAGCTGTTCCAGTGC
CTCTTCTGCGACAAGACGTTCCTCAAGTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACCGCAAGGGCCGCCTCGACGG
CCTCCTCTCCGACCCCTACAGCA---ACGACAGCCCATTCGGAGGCACCGCCATCGCGGCGGCGTCCACCGGGTCGTCGC
GCTATTTTG------------------GCACGTTCATCGTCTCACACGACGGCGCTGGCGTGGCGGCGGCGCCA------
ACCGTCGATGCCCGCTGGCCAGAGAGGAGGG---GGTTGGGCGGCAGGGCTCCGCGGTTCGCGGAGCAGGCGCTGCCCCT
GGACCCGTATGCTGGAGGCGACGGCGTGGTGGGCCGGCCAAGGGCCTCCATCGCAA------GCG---------GC--GC
CGGCGAGGCGTTGGACCTCGAGCTGCGCCTTTAGCTA----GCGTCGCCTTGCTGGCTGCTGTGCTGCCGCTCATATCGC
ACAGGT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr5A_1215
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GCGGCCACCAGAACGCGCACCGCAAGGACCGCCTCGCCGG
AGTCCTCGGCGACCCCTACAACA---ACGACAGTCTGTTGGGAGGT---------------GCCGCCACCGAGCCGTCCT
GCGATTCTGCTGCCGGCTGGTCCATGTGCAGTTACATCGCCTCGCACGGCCGTGGCGGCGCGGT---CGTTCCA------
GCCACCGATGCCTGCACGCAAGAGAGATGGG---G---AGGCGGCCGTGCTCCACGCTTCGCGGAGCCCGCGCCGCTCCT
GGGCCCGTCCACTGGCCGCGACGGCATGG---GCCGGTCAAGGGCCTC---------------TGGCGCTAGCAGC--GC
CGACGAGGCGCTAGACGTCGAGCTGCACCTCTAGCTGTTG-GCGTCGCCCGGCCGGCTGCTGC-----CTTTGATATTGC
ACAGGTGAAACTAATCAGTTCATCTACTACTA------------------------------------------------
-------------GCTCTCTTTTTTTAAAGCAAAAGAGGATCACCTCCGGTCTGTGATGCATCCCAACGATGCAGACATA
CATATTTTACTGGCTGC--------------------TCTTATCGATCTCTTTGTTACTTGTTATAATGAACTGGATCCT
CCAATCTAGCTCACTTTTTATTTGCGGGCAATCTAGCTCAATTAACCAACTTTGTGTTTAATCTCCATGCAGGTGTCGTC
GATGGAAACACTCA-GGAACAAATATAATCGTCTGTGTCGGCGATCGAACTTG-TATAGCCACGCCGGCTGCTCTCGGTA
CATTTGTGTTCTTGCGTGATATTGTAGGCAGCTAGCTGGCATTGTGGTTTCACCCGTTAATATTCATCTCGTGATAAAAT
AATTGTTAATATT------------CCTCGTACATCAATCCGTACCGCATGTACTAATAACGGCTCGCCGTAATAATATC
AGTGCACCTGTTGCTTCCCCGTTCTT--G-TTGTCCGGTTTTGCTATTCCTCTGACAACTGATTTTTT-T-AATCTAATG
-----ACAGAGAGGAAATCTATTGAAAATTACA-----AT----------------------------------------
-------------------------------------ATTTTCAGACGATTGATCTATAGGTGATTCTTATTTTTACTGC
TGTAGGTTT------TTTTTTT-----GCGTCACAAGCTCATGTACGCACTCTAATGGATGGACCAAACAAGCATACCCT
GTGCTGCTTCTTCTGCA--------------------------------TATGTTTACTGCACCCATGTGAT--------
TCGAGGAGACACTCCGTACGATGTGCTATAGTAGTACGCGACAAAAGAACGTACGGTCGTGCAGGGGAGTTGTGCAGTGA
CTCGGATGTGTAGTGGGCCGATCG--------ACTATATGCTCGCCCTGTCGACCCCCGCTGTTTGTTTTGTTTTGGGAC
CGACAGGCTGTTTGCTTAGTTTTGGACCGACAAGCTCTTTGTTCTCTTGCCCGCATACACTATGAAATGCTTTTTTATAG
ATTATA--------------------------------------------------------------------------
------------------------
>SNPs
--------------------------------------------------------------------------------
SSSSSSS-------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------S----------------------------S-----------------SS-----------------------
--------------------------------------------------------------------------------
---------------------------------------------S-S-S-S--S----S-SSS-SSS-SSS-S-SSSSS
SSS-SSS-S-SSSS-----S--S-SSSS---SSSS-SSS---SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
--S------------S----------------------------------------------------------------
-------------------S----------S------S--------------S-------------------------S-
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S--------SS-----S---------------S----------------S---------S--
------------------------------------------S--S--------------S-------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-------------------------------S------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S--------S-------------------
----------------------------------------------------S-S-----------S-------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
----------S-------S-------------------------------------------------------------
--------------------------SS-------------------------------S--------------------
------------------------S---S---------------------------------------------------
------------------------------------------S--------------------------S----------
------S-SSSSSSS--------------S------------------------------------------------S-
---S--------------------------------------------------------------------SSSSSSSS
--------------------------------------------------------------------------------
-----------------------S---------S----------S-------------S---------------------
----------------S---------------------------------------------------S-----------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_565
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATGAGCACCTCCGAG
AGACT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_3231
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TGTCCCAAGCTGACACTGAA------------------------------
------------------------
