>input_sequence_75785
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--------------------------------------------------------------------ATGAAGAACACA
CACATCATCTGCGCCCTCGCCGTATCTCTCGGGGCCATCGCCCTGCTCTCCGGCAGCACCGACG---CCGCATGCGCCGG
CGACCCGTCCATGTCCGTCGCCGACGCGTGCCACAAGACGAGCGCCTGGCAGGGCCAGCGCGAGCTGGAGCTCTGCCGGC
AGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCATCATCGCCGTGAGGGCCGCCCTCGAGTCGTGC
AAGGGCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAGATCTCGGAGGACGTGCGGGTGATGTACCAAACCTG
CGTTGACATGTACGGCTTCGCGCAGGCGGACGTCGCCGCCATGGAAGGCGCGCTCAAGTCCTGCTCGCTCGCGGACTTCC
GGCGCTTCTGGGAGGGCGCCCTCGTCTCGGTGGATCACTGCGCGGGGAAGCTGCGGCTCGTGGACGGCGACGTGCTGCAG
CGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCCTGGGAGGGCTTTCTTTTCCAAAATGGTAG-----
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--------------------------------------------------------------
>chr1D_1_TraesCS1D01G291800
TTTAT---------------------------------------------------------------------------
--------------------------TGAATTACTTTATCTAGGTCTATTTTTGTTTTTTCCGCGTCGTGCATAACTACA
CTTGCACAACTGCCCGGCCGTGCTCAACGGTATGTGCACATGCCACCCACTACTGCATTTGCATATTTTCTAAAATAGAA
ATGCAAAAAAGGTCAAGAATAAACATAAAATGAGAA--AAAATATAGAGGTGAAATAAAATGAAAAAGGGGGGAGAAAAA
TATATACTCAAGTGAGCTTGATGTGCTTTAATTCTCATTTAGATTAGAGATAGCCACACCAATAAACTAATGCTACACAT
TGATTACCCT----------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------TAAAAAAATGCTACACATTGATTTTAAGC---------------
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------------------------------ATTTATTGGGCTCTATAGGTTACTACATAATGATACACATTAATGGTTTT
ATTTTAATTTTTTCCATTTTGTACTAAATTAGTTTATTTGGGTTCTATTTATTTTTATGCCGCGTGTAACTACACTTGCA
TGACTGGCCGACTGTGCTCAACAGTATGTCCACATGCCACCCACTACTGCATTTGAATATTTTCTAAAATAGAAATGCAA
AAGGAA--TCAAGAATATAACGT-AAAATGGGGAAAATATAAAAGTGAAAAAAATTGGAAGCAGGAAAGATAAATATGTA
CT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAAGTGAGCTAGATTAAGATTAA
TGCTACACATTTAGTTCTCATTTAGATTTGAGATACCCCCAAAAACTAATGCTACACATTAATTGCTCAAAATATAAGTG
TGATTAATACTGTACATGCAGCATATCTTGAGATTAATGGAGTACTAGCCACACCCAAAAACTAATGCTACACATTGATA
--------------------------------------------------------------------------------
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------------------TTAAAGATTCATTGGCTTCTACAGGTTGCTGCATAATGATACACATTAATTGCTCTAGATAT
GCTGCATGTAC-AGTATAT-------TTTCAGTTTGGCTACT--ACTCCTTGGCAGGGCCGTTCTATAAAAGCCGTCCTT
-TGTTCCTTTCGAT------ACACAGGTCGAAGAACGCGCATAGCTTTAAACAGAGATCGAG-CAAACATGAAGAACACA
CACATCATCTGCGCCCTCGCCGTATCTCTCGGGGCCATCGCCCTGCTCTCCGGCAGCACCGACG---CCGCATGCGCCGG
CGACCCGTCCATGTCCGTCGCCGACGCGTGCCACAAGACGAGCGCCTGGCAGGGCCAGCGCGAGCTGGAGCTCTGCCGGC
AGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCATCATCGCCGTGAGGGCCGCCCTCGAGTCGTGC
AAGGGCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAGATCTCGGAGGACGTGCGGGTGATGTACCAAACCTG
CGTTGACATGTACGGCTTCGCGCAGGCGGACGTCGCCGCCATGGAAGGCGCGCTCAAGTCCTGCTCGCTCGCGGACTTCC
GGCGCTTCTGGGAGGGCGCCCTCGTCTCGGTGGATCACTGCGCGGGGAAGCTGCGGCTCGTGGACGGCGACGTGCTGCAG
CGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCCTGGGAGGGCTTTCTTTTCCAAAATGGTAGTATGC
GTG----GATGTGGAGATGTGGATTTTGTGTCGATAATAATTCGGTGGAAACGCAATA-ATACATGGCTTATGCAG----
-TGGTATTTCTAGC-------------TGGCTAGATTTGGTTGAAAGGTGTTTCT-TTAGAAAAAAAA-CTACTGGC--A
AAATTGATTGAAACATG----TCATCTT-CTGGAATGCTGTAGCATTGT---GTGCTTGTCACATTTATTTTTGATTCGA
CTCTGCTCATATTTTGAACTGAGCTGGGAAAAATCATGTGACACATGTGGTAATCAATCCTAAGAGCAACTCCAACGGGC
CAACCTAAACGGATGGTG-----------TTTTTATCCGTTTGGGTCCGCCAGGCGGACACGGATGTCCGCCTCCGCGTT
TGGGTCCGCGCATGCGCCCTACGCTGGCCCGACCCATTTTGACGGCGCTAGAAAAATAAA--TAA-------CGCATGCA
TATTAAAAAAGAAAAACAACATTAATTAAATAATAAAGCCGGCCACGAAGGCCGGCGAGAGTCCCCGCGTCCACATTTTC
A-TTT-AA--AAAAA-TAACAACAACCTAAACTACGAGGTGGCGCGCTGCCCTAGG---CGG---C---GGCGGCGTCGT
CCTC-GGGGTCCGTGAGATCGATGAGCGTCGGCGCCGGCCCGGCCCAGGGAAACGTCGTGTTCCAGAGCGCGTTCATGTC
GGGCGCAGGCTGTGCCGGCGC-GGGGGCTGTGCGGCCGCCTGTGCAGCCGCGGCCTGGCGCGCCTCCTCCTCGGCCTCGT
GCTGCTCCTCCTCGAGTTCGCGCTCGAGCATGTCGAGGTACTCGCCGTCGCGGCGCTCCTCGGCCACCCGGATCTGGCGC
CAGTGCTCGAGGTACGCCGCCTCCTGCGCCGACGTCGCCCCCACCCAGACCGGCGGCGCGCGTACCCACTCGCGCACTAC
TCCCGTCCAGGAGTAGCGCTCGATGGGGGACGGCTGCGGCTGCGGCTCCGGC------------------T---------
---------TGACGCGGCATCGGGGAGGGGACGGCGGGGCCACCGGCGGCACCACGCAGTCG
>chr1A_1
ACCCATAAACTAATGCTACACATTGATTTTAAAAATTTATTGGACTCTATAGTTTGTTGCATAATGATACGCATTAATGA
TTGTTTTTCTTCCTTTTCCCTTTTACTGAATTACTTTATCTGGGTCTATTTTTATTTTTTCCGCGCCGTGCGTAACTACA
CTTGCACAACTGCCCGGCCGTGCTCAACGGTATGTCCACATGCCACCCACTACTGCATTTGCATATTTTCTAAAATAGAA
ATGCAAAAAAGGTCAATAATAAACATAAAATGAGAAAAAAAATATAGAAGTGAAATAAAATGGAAAAGGGGGGAGAAAAA
ATATATATGCTCAA------------------------------------------------------------------
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-----------------------------------------------------------------GTGAGCTAGATGAGA
TTTAATTCTCATTTAGATCAGAGATAGGCACACCCATAAACTAATGCTACACATTGATTTTAAGC---------------
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------------------------------ATTTATTGGGCTCTATAGGTTACTGC------------------------
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-------------------------------------CATCCACTACTGTATTCGGTATTGTTTTAAAATAGAAATGCAA
CAAAAAATTCAAGAATAAAACGTAAAAATGGGAAAAATATAAAAGTGAAAAAAAA-GGAAGCAGGAAAGATAAATATGTA
CT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAGGTGAGCTAGATTAAGATTAA
TGCTACACATTTAATTCTCATTTAGATTAGAGATA---------------------------------------------
--------------------------------------------CTAGCCACACCCGAAAACTAATGCTACACATTGATA
--------------------------------------------------------------------------------
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------------------TTAAAGATTCATTGGCTTCTACAGCTTGCTGCATAATGATACGCATTAATTGCTCTAGATAT
GCTGCATGTAC-AGTATAT-------TTTCAGTTTGGCTACTACACTCCTTGGCAGGGCCGTTCTATAAAAGCCATCCTT
GTGTTCCTTCCCAT--ACACACAGAGGTTGCAGAGCGCGCATAGGTTTATACAGAGATCGAG-CAAACATGAAGAACACA
CCAATCATCTGCGTCGTCGCGGTATCTCTCGGGGCCATCTCCTTGCTCTCCGGCAGCACCGACGCCACCGCATGCGCCGG
CGACCCGTCCATGTCCGTCGCCGACGCGTGCCACAAGACGAGCGCCTGGCAGGGCCAGCGCGAGCTGGAGCTCTGCCGGC
AGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCGTCATCGCCGTGAGGGCCGCCCTCCAGTCGTCC
GAGGCCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAGATCTCCGAGGACGCGCGGGCGGTGTACCAGAGCTG
CGTGGACATGTACGGCTTCGCGCACGCGGACGTCGCCGCCATGGAAGGCGCGCTCAAGGCCTGCTCGCTCGCGGACTTCC
GGCGCTTCTGGGAGGGCGCCCTCGCCTCGGTGGATCACTGCGCGCGGAAGCTCCAGCTCGTCGACGGCGACGTGCTCCGC
CGCACGGTGGAGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCCTGGGAGGGCTTTCTTTTCCAAAATTGTAGTATGC
CTGCCTGGATGTGGAGATGTGGATTTTGGGTTGGTAATAATTCGGTGGTAACCCGACC-ATA---------TGCGG----
-TGGTATTTGTAGT-------------TGTCTAGATTTGGTTGCAAGGTGTTTCA-GATGATAAAAAACCTACTGGCAAA
AAATTGATTGAAACATG----TCATCTTTCTGGAATGCTGTAGCAT----------------------------------
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--------------------------------------------------------------
>chr1B_303
TAAACTAATGCTACACATTGATTTTAAGGATTTATTGGGCTATATAGGTTTACTGCATAATGATACACACTAATAATTTT
TTTCATTTTATACTGAATTAGTTTATTTGGGTTTTATTTATTTTTATGTCCTGTGTAACTACACCTGCATGACTGGCCGG
CTGTGCTCAACAGTATGTCCACATGCCACCCACTACTACATTATATTTTCTAAAATAGAAATGCAAAAGGAAAAATCGAG
AATAGAACGTAAAATGAGAACAAATATAAAAGTGAAATAAAATGGGAAAGGGGGAAAG--------------------AA
AAATATATACTCAAGTGCGCATGTGCGCGCGCGCCTGTGTGTGTCTCATCACTCCTCGGGGCCAACTCCTCCTATTCATC
GCATCTCTCCCTGACTCGGTCTCCTCCACAAGCTGTAGCACCACCCCACGCCATGGACGCCCTTGCCGGCTGCATCTCCA
CCAGCACCGCAATGGGCGTGGCTCTATAGGTTGCTGCATAATGATACACATTAATGATTTTTGTTTTCTTTTTTTTCCTT
TTCTACTGAATTATTTTATCTGGGTTCTATATTTTTCTCAGGTCACGGGCAACTACACTTGCACGAATGCCCGCTGTGCG
CAACAGTATGTCCACAAGCCGTCCACAACTGCATTTGCATTTTTTTTAAATAGAAATGCAATAGAAAAGGTCGAAAATAA
AATGTAAGATGAGAAAAATATAAAAGTGGAAGAAAATGGAAAGGAGGAAAGAAAAATATACTCATGTGAACTAGATGAGG
TTTAATTCTCATTTAGATCAGAGATATCCACACCTATAAACTAATACTACACATTGATTTTAAGGATTTATTGAGCTCTA
TAGGTTGCTGCAAAATGATACTCCCTCCGTTCCATACTGTAGTGCCTATAGATTTTTGCAAAAGTCAAACATTACAAACT
TTGACCATATTTATAAAGAAAAGCAGGTACATCTAGAATACCAAATGCACATCATTGTATACATGATGAATTATATTTTC
AAAATGTACATGTTTGGTATTGTAGATGTAGACAGTTTTCTTTATATACTTGGTCAAAGTTGGCAAAGTTTGACTTTCAC
AAAAATCTATAGGCATTATTTTGTATACATTAATGATTTTCCCTTTTTACTGATATCTGGGTTCTATTTATTGTTTTTCA
CCCCGGGGCTTAACTATGCTTGCATGACTGCCCAGCTGTGTGCAAAAATATGTCCATATGCCATCCACTACTGCATTTGG
AGATTTTCTAAAATAAAAATGCAATAAAAAAGTCAAGAACAATGCGTAAAATGAGAAACATATAGAACTGAAATAAAATG
GAAAATGAGGAAAGAAAAATATATACTCGAGTGGGCTTGATGACGTTTAATTCTCATTTAGATGAGAGATAGCCACACCC
ATAAACTAATGCTACAGATTTATTTCAAGGATTTATTGGGCTCTATAGGTTACTGCATAATGATACACATTAATGTTTTT
TTC----TTTTTTTCATTCTGTTCCGAATTAGTTTATTTGGGTTTTATTTATTTTTACGCCGCGTGTAACTACACTTGCA
TGACTGGTCGGCTGTGCGCAACAGTATGTCCACATGCCACCCACTACTGTATTCGCGTATTTTCTAAAATAGAAATGCAA
CAAAAAATTCAAGAATAAAACAT-AAAATGGGG-AAATATAAAAGTGAAAAAA--TGGAAGCAGGAAAGAAAAATATGTA
CTACCTCCGTTTCAGTTTACAAGTCCTGCGCGTATACCTAGGTTGCCAATTTTATCACCCTAATATAAACTATATAACAT
AAAAATTATATCTTTTGAAAGTAGAAACTCCGAAGTTTATGTTGGTATATTTTTTTGTAATATATGACTTGTATTAGGTT
GGTTACGACCTAGGGATATGCGCACGCCCTGTAAACTGAGAGAGAGGTAGTACTACTCAAGTGAGCTAGATTAAAATTAA
TGCTACACATTTAATTCTCATTTAGATTAGAGATA---------------------------------------------
--------------------------------------------CTAGCCACACCCAAAAACTAATGCTACACATTGATA
--------------------------------------------------------------------------------
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------------------TTAAGGATTCATTGGCTTCTACAGGTTGCTGCATAATGATACACATTAATTGCTCTAGATAT
GCTGCATGTACCAATATAC-------TTTCAATTTGGCTACT--ACTTCTTTGCAGGGCCGTTCTATAAAAGTCGTCCTT
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>chr1B_768
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-----------------------------GAGATA---------------------------------------------
--------------------------------------------CTAGCCACACCCATAAACTAATGCTACACATTGATA
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------------------TTAAGGATTCATTGGCTTCTACTGGTTGCTGCATAATGATACACACTAATTGCTCTAGATAT
GCTGCATGTAC-AATATAT-------TTTCAGTTTGGCTACT--ACTCCTTGGCAGGGCCGTTCTATAAAAGCCGTCCTT
GGGTTCCTTCCGATACACACACAGAGGTTGCAGAACGCGCATAGGTTTAGACAGAGATCGAG-CAAAAATGAAGAGCACA
CCCATCATCTGCGTCGTCGCCGTATCTCTCACGGCCATCGCCTTGCTCTCCGGCAGCACCGACG---CCGCATGCGCCGG
CGACCGGTCCATGTCCGTCGCCGGCGCGTGCGACAAGACGAGCGCCTGGCAGGGCCAGCACGAGCTGGAGCTCTGCCAGA
AGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCATCATCGCCGTGAGGGCCGCCCTTCAGTCGTCC
GAGGCCACCGAGGGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAACTCCCCGAGGACGCGCGGGCGGTGTACCAGATCTG
CGTGGACATGTACGGCTTGGCGCGCACCGACGTCGTCGCCATGGAAGGCGCGCTCAAGGCCTGCTCGCTCGCGGACTTCC
GGCGGGTATGGGAGGGCGCGCTCGCCTCGGTGGATTACTGCGCGGGGAAGCTGCGGCTCGTCGACGGCGACGTGCTGCAG
CGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCCTGGGAGGGCTTTCTTTTCCGAAATGATAGTATGC
CTG----GATGTGGAGGTGTGGATTTTGTGTCGGTAATAATTCGGTGGAAACCCAGTTGATA---------TGCGG----
-TCGTATTTGTAGT-------------TGA-TTGATTTGATTTAAAGTTGTTTCA-AAAGAAAAA--T-CCACTGGC--A
AAATTGATTGAAACATG----TCATCTT-CTGGAATGCTATAGAA---T---GTGCTTCTCACATTTATTTTTGATTCGA
CTCTGCTCGTATTTTGAACTGAGCTGAGAAA-------------------------------------------------
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>chr1D_774
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---------------------------------------------TAGCCACACCCATAAACTAATGCTACACATTGATT
ATAAAGATTTATTGGGCTCTATAGGTTGCTGCATAATGATACACATTAATGATTTTTGTTTTTTTCCTATTCTACCGAAT
TATTTTATCTGGGTTCTATATTTTTCTCACGCCACGCGTAACTACACTTGCATGACTGCCCGCTGATGTCCACAAGCCGT
CCAGGACTGCATTTGCATTTTTTAAATAGTTGAAAATAAAACGTAAGACGAGAAAAATATATAAGAGAAAGAAAATGGAA
AGGAGGAATGAAAATTATACTCATGTGAACTAGATGAGATTTAATTCTCATTTAGATCAGAGATATCCGCACCCATAAAC
TAATGCTACACATTGATTTTAAGGATTCATTGGCTTCTACAGGTTGCTGCATAATGATACACATTAATTTCTGAAGATAT
GCTGCATGCAC-AGTATATTTTCAGTTTTCAGTTTGGCTACT--ACTCCTTGGCAGGGCCGTTCTATAAAAGCCATTCTT
GTGTTCCTTTG-AT--ACACACAGAGGTTGCAGAGCGCGCA--------GACAGAGATCGAG-CAAACATGAAGAACACA
CCAACCATCTTCACCCTCGCCGTCTCTCTCGGGGCAATCGCCCTGCTTTCCGGCAGCACCGACGCCACCACATGCGCCGG
CGACCCGTCCATGTCCGTTGCCGACGCGTGCCACAAGACGAGCGCCTGGCAGGGCCAGCGCGAGCTGGAGCTCTGCCGGC
AGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCATCATCGCCGTGAGGGCCGCCCTTGAGTCGTCC
GAGGCCACCGAGGGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAGATCTCCGAGGACGTGCGGGCGGTGTACCAAACCTG
CGTGGACATGTACGGCTTCGCGCGCGCCGACGTCGCCGCCATGGAAGGCGCGCTGAAGGCCTGCTCGCTCGCCGACTTCC
GGCGCTTCTGGGAGGGCGCACTCGCCTCGGTGGATTACTGCGCGCGGAAGCTGCGGCTCGTCGACGGCGACGTGCTCCGC
CGCACGGTGGAGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCCTGGGAGGGCTTTCTTTTCCGAAATGATAGTATGC
CTG----GATGTGGAGATGTGGACTTTGGGTCGATAATAATTCGGTGGTAACCCAATGGATC---------TGCGG----
-GGGTATTGGTATTTTTCAAAATAGCATGTCTAGATTTGGTTGAAAGGCGTTTCA-AAAGAAAAAAAAG-TACTGAC--A
AAATTGATTGAGACATG----TCATCTT-CTGGAATGCGGTAGCA---T---GTGCTTCTCGCATTTATTTTTGATTCGA
CTCCACTCGC--TTTGAGCTGAGCTG------------------------------------------------------
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>chr1B_954
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--------------------ACAGAGGTTGCTGAACGCGCATAGGTTTAGACAGAGATCGAACCAAACATGAAGAGCACA
CCCATCATCTGCGCCCTCGCCGTATCTCTCGGGGCCATCGCGCTGCTCTCCGGCAGCACCGATG---CCGCATGCGCCGG
CGACCGGTCCATGTCCGTCGCCGGCGCATGCGACAAGACGAGCGCGTGGCAGGGCCAGCGCGAGATGGAGCTCTGCCAGA
AGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCATCATCGCCGTGAGGGCCGCCCTTCAGTCGTCC
GAGGCCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAGATCTCCGAGGACGTGCGGGCGGTGTACCAGAGCTG
CGTGGGCATGTACGGCTTCGCGCGCGCGGACGTCGCCGCCATGGAAGGCGCGCTGAAGGCCTGCTCGCTCGCGGACTTCC
GGCGCTTCTGGGAGAGGGCGCTCGCCTCGGTGGATTACTGCGCGCGGAAGCTGCGGCTCGTCGACGGCGACGTGCTGCAG
CGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCATGGGAGGGCTTTCTTTTCAGAAATGATAGTATGC
CTGCCTGGATGTGGAGGTGTGGATTTTGTGTCCGTAATAATTCGGTGGAAACCCAGTG-ATA---------TGAGGGGGT
TTGGTATTTGTAGT-------------TGTCTAGATTTGGTTGAAAGGTGTTTCCTAAAAAAAAA--A-CTACTGGC--A
AAATTGATTGAAACATGCATGTCACCTT-CTGGAATGCTGTAGCA---TTGTGTGTTTCTCACATTTATTTTTGATTCCA
CTCTGCTCGTATTTTGAACTG-----------------------------------------------------------
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>chr3D_1828
TCATTCT-------------------------------------------------------------------------
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-----------------------------------------------------------CTAAGAGCAACTCCAACGGGC
CGATCCAAACGGACAGCGATTTTGTCCGCTTTTTGTCCGTTTGGGTCGGCCAGGCGGACACGGATGTTCGCTTTCACGTT
TGGGTCGGCGCGTGCGCCCAATGCTGGTCCGACCCATTTTGACGGCGCTAGGAAAAGAAA--GAA-------TGCATGCA
TATTT-AAAAGAGAAACAACATTAATTAAACATTAAAGCCGGCCACGAAGGCCGGCGAGAGTCCACGCGTCCACATTTGC
A-TTT-AA-GAAAAA-TAAAAACAACGTAAACTACGAGGCGACGCGCTGCCCGAAGCGTCGT---C---GTCGTC---GT
CCTC-AGGGTCCGTGAGGTCGATGAGCGTCGGCGCCGGACCGACCCAGGGGAACGCCGTGTTCCAGAGCGCGTTCATGTC
GGGCGCGGGCAGTGCCAGCGC-GGGGGCTGTGCGGCCGCCTGTGCAGCCGCGGCCTGGCGAGCCTCCTCCTCGGCCTCGC
GCTCCTCCTCCTCGAGGTCGTGCTCGAGCATCTCGAGGTACTCGCCGTCGCAGCGCTCCTCGACCACCCGGATCTGGCGT
CAGTGCTCGAGGTACGCCGCCTCCTATGCCGGCATCGCCCCCACCCAGGCCGGCGGCGCGCGGACCCACTCGCGCACTAC
TCTTGTCCAAGAGTAGCGCTCGATGGGGGACGGCTC------TGGCTCGGGC------------------T---------
---------TGACGCGGCGTCGGGGTGGGGACGGCGGGGCCACCGGCGGCAGCATGCAGTCG
>chr7D_1835
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------------------------------------------------------------TAAGAGCAACTCCAACGGGC
CGATCCAAACGGACAGCGC-----------TTTTGTCCGTTTGGGTCGACCAGGCGGACACGGATGTCCGCTTCCGCGTT
TGGGTCGGCGCGTGCGCCCAACGCTGGCCCGACCCATTTTGACGGCGCTAGAAAAA-AAA--TAA-------CGCATGTA
TATTTAAAAAGAAAAACAACATTAATTAAAC-ATAAAGCCGGCCACGAAGGCCGGCGAGAATCCACGCGTCCACATTTGT
ATTTAAAA--ATAAA-TAAAAACAACCTAAACTACGAGGCAGCACGCTGCCCTAGG---CGT---C---GTCGTCGTCGT
CCTCAGGGGTCCGTGAGGTCGATGCGCGTCGGCGCCGGCCCGGCCCAGCAGAACGCTGTGTTCCAGAGCGCGGCCATGTC
GGGCGCAGGCAGTGCCAGCGCGGGGGGCTGTGCGGCCGCCTGTGCAGCCGCGGCCTGGCGCGCCTCCTCCTCGGTCTCGC
GCTGCTCCTCCCCGAGGTCGCGCTCGAGCATCTCGAGGTACTCGCCGTCGCGGCGCTCCTCGGCCACCCGGATCTGGCGC
CAGTGCTCGAGGTACGCCGCCTCCTGCGCTGGCGTCGCCCTCATCCAGACCGGTGGCGCGCGTACCCACTCGCGCACTAT
TCCCGTCCAGGAGTAGCGCTCGATGGGGGACGGCTC------CGGCTCGGGC------------------TCCGGCTGCT
TTTCCGGCTTGACGAGGCATCGGGGAGGGGACGGCGGGGCCACCGGCGGCACCACGCAGTCG
>chr1D_1873
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-----------------------------TTTTTGTTCGTTTGGGTCGGCCAGGTGGACACGGATGTTCGCTTCCGTGTT
TGGGTCAGCGTGTGTGCCCAACGCTGGCCCGACCCATTTTGACAGCGCTAGAAAAA-AA---TAA-------CGCATGCA
TATTTAAAAAGAAAAACAACATTAATTAAACAGTAAAGCCGGCCACGAAGGCCGGCGAGAGTCCACGCGAACACATTTGC
A-TTT-AA--AAAAA-TAAAAATAACCTAAACTACGAGGCGGCGCGCTGCCCTAGG---CGT---C---GTCGTCATCAT
CCTT-GGGGTCTGTGAGGTCGATGAGCGTCGGCGCCAGCCCGACCCAGGGGAACGCCGTGTTCCAGAGCGCGTACATGTC
GGGCGCAGGCAGTGCCGGCGCGGGGGGCTGTGCGGCCGCCTGTGCAGCCGCGGCCTAGCACGCCTCCTCCTTAGCCTCGC
GCTGCTCCTCCTCGAGGTCGCACTCGAGCATCTCGAGGTACTCGCCGTCGCAGCGCTCCTCGGCCACCCGGATCTGGCGC
CAGTGCTCGAGGTACACCGCCTCCTACGCCGGCGTCG-CCCCACCCAGACTGGCGGCGCGCGTACCCACTCGCGCACTAC
TCCCGTCCAGGAGTAGCGCTCGATGAGGGACGGCTC------AGGGTCGGGCTCGGGCTGCGGCTCCGGCT---------
---------TGACGAGGCATCGGGGAGGGGACGGCGGGGCCACCGGCGGCACCACGCAGT--
>chr1D_1873
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-----------------------------TTTTTGTCCGTTTGGGTCGGTCAGGCGGACACGGATGTCCGCTTCCGTGTT
TGGGTCGGAGCGTGCGCCCAACGCTGGCTCGACCCATTTTGATGGCGCTAGAAAAA-------AA---AGAACGCATGCA
TA-TTTAAAA-AACAACAACATTAATTAAACATTAAAGCCGGCCACGAAGGCCGGCGAGAGTCCACGCATCCACATTTGC
A-TTT-AAAGAAAAA-TAAAAACAACCTAAACTACGAGGCGGCGCGCTGCCTTAGG---CGG---CGTCGTTGTCGTCGT
CCTC-GGGGTCCGTAAGGTCGATGAGCGTCAGCGCCGGACCGGCCCAGGGGAACACCGTGTTCCAGAGCGCGTTCATGCC
GGGCGCGGGCTGTGCCGGTGC-GGGGGCTGTGTGGCCGCCTATGCAGCCGCGGCCTGGCGCGCCTCCTCCTCGGCCTCGC
GCTGCTCCTTCTTGAGGTCGCGCTCGAGCATCTCGAGGTACTCGCCATCGCGGCACTCCTCGGCCACCCGGATCTGGCGC
CAGTGCTCGAGGTACGCCGCCTCCTGCGCCGGCGTTGCCCTCACCCAGACCGGCGGCGCGCGGACCCACTCGCGCACTAC
TCCTATCGAGGAGTAGTGCTCCATGGGGGACGGCTC------CGGCTCGGGC------------------T---------
---------TGACGCGGCGTCGGGGATGGGACGGCGAGGCCACCGGTGGCAGCACGCAGT--
>chr7D_1873
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-----------------------------TTTTTGTCCGTTTGGGTCGGCTAGGCGGATACAGATGTCCGCTTTCGCGTT
TGGATCGGCGCGTGCGCCCAATGCTGGCCCGACCCATTTTGACGGCACTAGAAAAA-------AA-------CGCATGCA
TATTAAAAATGAAAAACAACATTAATTAAATAGTAAAA-CGGCCACGAAAGCCAGCGAGAGTCCACACGTCCACATTTGC
A-TTTAAA--AAAAA-TAAAAACAACCTAAACTACGAGGCGGCGCGCTGCACTAGG---CGT---C---GTCGTC---GT
CCTC-GGGGTCCGTGAGGTCGATGAGCATCGGCGCCGGCCCGGCCTAGGGGAATGCCGTGTTCCAGAGCGCG--------
-------GGCAGTGCCGGCGCGGGGGGCTGTGCGGCCGCCTGTACAGCCGCGGCCTGGCGCGCCTCCTCCTCGGCCTCGC
GCTGCTCCTCCTCGAGGTCGCGCTCGAGCATCTTGAGGTACTCGCCATCGCGGCGCTCCTCGGCCACCCGGATCTGGCGC
CAGTGCTCGAGGTACGCCGCCTCCTGCGCCGGCGTCGCCCCCACCCAAACCGGCGGTGCACGTACCCACTCGCGCACTAC
TCCCGTCCAGGAGTAGCGCTCGATGGGAGACGGCTA------CGGCTCGGGCTCCGGCTGCGGCTCCGGGT---------
---------TGACGCGGCATCGGGGAGGGGACGGCGGGGCCACCGGCGGCACCACGCAGTCG
>chr5D_1873
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-----------------------------TTTTTATCCGTTTGGATCGACCAGGCGGACACGGATGTCCGCTTCCGCGTT
TGGGTCGGCGCGTGCGCCCAACGCTGATCTAACCCATTTTAACGGCGCTAGAAAAA-------AA---TAAACGCATGCA
TATTAATAAAGAGAAACAATATTAATTAAACATTAAAGCCGGCCACGAAGGCCGGCGAGAGCCCACACGTCCATATTTGC
A-TTTAAA--AAAAA-TAAAAACAGCCTAAACTACGAGGCGGCGCGCTGCCCTAGGTGTCGT---C---GTCGTC---GT
CCTC-GGGGTCCGTGAGGTCGATGAGCGTCGGCGCCGGCCCGGCCCTGGGGAACGCCGTGTTCCATAGCGCGTTCATGTC
GGGCGCAGGCTGTGCCAGCGCGGGGGG-TGTGCGGCCGCCTGTGCAGCCGCGGCCTGACGCGCCTCCTCCTCGGCCTCGC
GCTGCTCCTCCTCGAGGTCGCGCTCGAGCATCTCGAGGTACTCGCCCTCGCGGCGCTCCTCGGCCACCCGGATCTGGCGC
CAGTGCTCGAGGTACGCCGCCTCCTGCGCCGGCGTCGCTCCCACCCAGACCGGCGGCGCGCGTACCCACTCGCGCACTAC
TCCCGTCCAGGAGTAGCGCTCGATGGGGAACGGCTC------CGGCTCGGGC------------------TCGGGCTG--
----CGGCTTGACGTGGCATCGGGGAGGGGACGGCGGGGCCACCGGCGGCACCACGTTGTCG
>chr3D_1873
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-----------------------------TTTTTGTCCGTTTGGGTCAGCCAGGTGGACACGGATGTCCGCTTCCGTGTT
TGGGTCGGCGCGTGCGCCTAACGCTGGCCCGACCCATTTTGATGGCGCTAGAAAGA-AAAAATAA-------CGCATGCA
TATTAAAAAAGAAAAATCATATTAATTAACCAGTAAAGCCGGCCACGAAGGCCGGCGAGAGTCCACGTGTCCACATTTGC
A-TT--AA--AAAAAATATAAACAACCTAAACTACGAGGCGGCGCGCTGCCCTAGG---CGT---C---GTCGTC---GT
CCTT-GGAGTCCGTGAGGTCGATGAGCGTCGGTGCCGGCCCGGCCTAGGGGAACGCCGTGTTCCAGAGCGCGTTCATGTC
GGGCACAGGCAGTGCCGGCGCGGGGGGCTGTGCGGCCGCCTATGCAGCCGCGGCCTGGCGCGCCTCCTCCTCGGCCTCGC
GCTGCTCCTCCTCGAGGTCGCGCTCGAGCATCTCGAGGTACTCGCCGTCGCGGCGCTCCTCGGCCACCCGGATCTGGCGC
CACTGCTCGAGGTACGTCGCCTCCTGCGCCGGCGTCGCCCCCACCCAGATCGGCGGCGCGCGTACCCACTCGCGCACTAC
TCCCGTCCAGGAGTAGCGCTCGATGGGGGACGGCTT------GGGCTCGGGCTCCGGCTGCGGCTCAGGCT---------
---------TGACGCGGCATCGGGGAGGGGAAGGCGGGGCCACCGGCGGCACCACGCAGTCG
>chrUn_1873
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-----------------------------TTTTTGTCCGTTTGGGTCGGCCAGACGGACACGGATGTCCGCTTCCTTGTT
TGGGTCGGCGCATGCGCCCAACGCTGGCCCAACCCATTTTGACGGCGCTAGAAAAA-------AA---G-AATGCATGCA
TATTTAGA---AAAAACAACATTAATTAAACATTAAAGCCGGCCACGAAGGCCGGC-AGAGTCCACGCGTTCATATTTGC
A-TTTAA--GAAAAA-TAAAAACAACCTAAACTACGAGGCGGCGCGCTGCCCTAGG---CGT---C---GTCGTCATCGT
CCTC-AGGGTCCGTGAGGTCGATGAGCGTCGGCGCCGGACCGGCCCAGGGGAACGCCGTGTTCCAGCGCGCGTTCATGTC
GGGCGCAGGCAGTGCCGGCGTGGGGGGCTGTGTGGCCGCCTGTGCAGCCGCGGCCTGGCACGCCTCCTCCTCGGCCTCGC
GCTGCTCCTCCTCGAGGTCGCGCTCGAGCATCTCGAGGTACTCGCCGTCGCCGCGCTCCTCGGCCACCCGGATCTGGCGC
AAATGCTCGACGTACGCCGCCTCCTGCGTCGGCGTCGCCCCCATCCAGACCGGCGGCGCACGGACCCACTCACGCACTAC
TCCTGTCCAGGAGTAGCGCTCGATGGGGGACGGCTC------GGGCT------GTGGCTCCGGCTCGGGCT---------
---------TGAAGCGGCGTCGGGGAGGGGACGGCGGGGCCACCGGCAGCAGCACGCAATCG
>chr2D_1873
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-----------------------------TTTTTGTCTGTTTGGGTCGGTCAGACGGACACGGATGTCCGCTTCTGCATT
TAGGTCGGCGCGTGCGTCCAACGCTGGCCGGACCCATTTTAACGGCGCTAGAAAAA-------AA---GTAAAGCATGCA
TA-TTAAAAAGAAAAACAACATTAATTAAACAGTAAAGCCGGCCACGAAAGCCGGCGAGAATCCACGCGTCCATATTTGC
A-TT--AA--AAAAA-TAAAAACAACCTAAACTGCGAGGCGGCGCGCTGTCCTAGG---CGTTGTC---GTCGTC---GT
CCTC-GGGATCCGTGAGGTCGATAAGCGTCGGCGCCGGCCCGGCCCAGGGGAACGCCGTGTTCCTGAGCGCGTTCATGTC
GGGCGCAGGCTGTGCCGGCGCGGGGGGCTGTGCGGCCGC------------GGCCTGGCGTGCCTCCTCCTCGGCCTCGC
GCTGCTCCTCCTCGAGGTCGCGCTCGAGCATATCGAGGTACTCGCCGTCGCGGCGCTCCTCGGCCACCCGGATCTGGCGC
CAGTGCTCGAGGTACGCCGCCTCCT-CGCCGGCGTCGCCCCCACCCAGACTGGCGGCGCGCGTACCCACTCGCGCACTAC
TCCCATCCAGGAGTAGCGCTCGATGGGGGACGGCTC------CGGCTCGAGCTGCGGCTGCGGCTCCGGCT---------
---------TGACGCGACATCGGGAAGGGGACGGCGGGGCCACCGGCGGCACCACGCAGTCG
>chr7D_1882
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--------------------------------------GTTTGGATTGGCCAGGCGGACACGGATGTCCGCTTCCGCGTT
TGGGTCGGCGCGTGCACCCAACGCTGGCCCGACCCATTTTAACGGCGGTAGAA--A-AAAAATAA-------CGCATGCA
TATTAAAAAAGAAAAACAACATTAATTAAACAATAAAGCCGGCCACGAAGGCCGGCGAGAGTCCACGCGTCCACATTTGC
A-TT--AA--AAAAA-TAAAAACAACCTAAACTACGAGGCGGCGCGCTGCCCTAGG---CGTCGTC---GTCGTC---GT
CCTC-GAGATTCGTGAGGTTGATGAGCGTCGGCGCCGGCCCGGCCCAGGGGAACGCCGTGTTCCAGAGAGCGTTCATGTC
GGGCGCAGGCAGTGCCGACGCGGGGGGCTGTGTGGTCGCCTGTGCAGCCGCGGCCTGGCGCGCCTCCTTCTCGGCCTCGC
GCTCCTCCTCCTCGAGATCGCGCTCGAGCATCTCGAGGTACTCGCCGTCGCGGCGCTCCTCGGCCACCCGGATCTGGCGC
CAGTGCTCGAGGTACGCCGCCTCCTGCGCCGGCGTCGCCCCCGCCCAGACCGGCGGCGCGCGTACCCACTCGCGCACTAC
TCCCATCCAGGAGTAGCGCTTGATGGGAGACGGCTT------CGGCCCGGGCTCCGGCTGCGATTCCGGCT---------
---------TGACGAGGCATCGGGGAGGGAATGGCGGGGCCACCGGCGGCACCA-GCAGTCG
>chr6D_1916
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------------------------------------------------------------------------TCCGCGTT
TGGGTCGGCGCGTGCGCCCAACGCTGGCCCGACCCATTTTGACGCCGCTAGAAAAA-------AAAAAAGAACGCATGCA
TA-TTAAA---AAAATCAACATTAATTAAACATTAAAGCCGGCCATGAAGGCCGGCGAGAGTCCACGAGTCCACATTTGC
A-TTTAA--GAAAAA-TAAAAACAACCTAAACTACGAGGCGT-GCGTTGCCCTAGG---CGTCGCC---GTCGTC---AT
CCTC-AGGGTCCGTGAGGTCGATGAGCGTCGACGCCGGACCGGCCTAGGGGAACGCCGTGTTCCAGAGCGCGTTCATGTC
GGGCGCAGGCTGTGCCGGCGCGGGGGGCTGTGCGGCCGCCTGTGCAGCCGCGGCCTGGCGCGCCTCCTCCTCGGCCTCGC
GCTGCTCCTCCTCGAGGTTGTGCTCGAGCATCTCGAGGTACTCGTCGTCGCGGCGCTCCTCGGCCACCCGGATCTGGCGC
CAGTGCTCGTGGTATGCCGCTTCCTGCGCTGACGTCG-CCCCACCCATACTGGCGGCGCGCGGACCCACTCGCACATTAC
TCCCGTCCAGGAGTAGCGCTCGATGGGGGACGGCTC------CGGCTCGGGC------------------T---------
---------TGACGCAGCGTCGAGGAGGGGACGGCGGGGCCACCGGCGGCAGCACGCAGTCG
>SNPs
-SS-----------------------------------------------------------------------------
-----------------------------------------S-----------S--------------------------
-----------------------------------S--------------------------------------------
----------------S-------------------------------S-------------S-----------------
S-SSSSS-SSSSSSSSSSSS------SSSSSSS-SSS-S-SSS-SSS-SSSSS--S-SSSSSS--SSSSSSSSSSSSSSS
SS--SS-S-S----------------------------------------------------------------------
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----------------------------------------SS--------------------------------------
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------------------------------------------------------S--------------------S----
S-SSSSS------S----S---S-SS------------------S------------S----------------------
-------S--S------S-------------------------------S---S-SS-----------------------
S-SS-------------S------------------------------------S-------------------------
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-------------S--------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
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-----------------------S----S-S-------------S----S------------------------------
-S------------------------------------------------------------------------------
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------------------------------------------------------------------------------S-
S---S---------------------------------------------S-------------S-S-------------
---S--------------------S---------------------------------S---------------------
------------------------S------------------------------------S------------------
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S---------------------------------------------------S----S----SSSSSSSSS---S-----
---------S---S---------------S------------------------S-SS----------------------
----------------------------------------------SS----------S---------------------
--------S-----------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
-S-S-S-------SS-S------------------------------S-----------------------S--------
------S------------S------------------------------------S-----------------------
----------------------------------------------------------------S-------------S-
-------------------S-------------------S------------------------------S--S------
-----------------S--------------------------------S----S------------------------
-------------------------------------------------------------------------------S
----------------S--------------S------------------------------------------------
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-----------------------------------SSSSSSS------S-------------------------------
--------------------------------------------------------------
>forward_1654
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----------------------------------TGCCACCCACTACTGCATTT--------------------------
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>reverse_3971
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--------------------------------------------------AAACGTCGTGTTCCAGAGCG----------
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