>input_sequence_75779
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------------------------------------------------------------------------------AT
GGCAACGCCCCAGAGCGGCAGCCCGAGCCCAGCGACCACGGCGGCGTCGGCGGTGGAGACGAGCAAACACTGGGCGCCGC
ATGGCCCGATGCTGATGGCCTGCCTCGTCAGCATCAACTTGCTCATGATCCTCCTCGTCTTCTTCTACTTCTGGCGGTTC
TTCTCCGGGAAGCGAGGGCCGTCATCCCCCGGCGGCGCTGATGAGGAGGCGTCATCGGCCGACTCGTCTCCGGCGACCTC
GCCGAGAGCGTCAAGGCGCCTGCGTGACTCCGACCAACCGGACATCCCGTCTTCCCTGCCCGTGTCCGTGTTCGACTCCA
GCAGCGAAGCCGCCGGGAAGGCGGCGGCCGACTGCGCGGTGTGCATCGTGGAGTTCCGGGACGGCGACCTGGCGCGCCTC
CTACCTCGCTGCGGGCACCGATTCCACGCCGCGTGCGTGGACGCGTGGTTGCATCTACACTCCACGTGCCCGCTCTGCCG
CGCCAGCGTGGTCGCCCCTGTGCCCGCCGCCGCCGAGCCCAAGAACGACTACAAAGACGACGGCCCGGAGTGCCCGGTGT
GA------------------------------------------------------------------------------
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>chr1B_1_TraesCS1B01G242800
ACCGGCGTCCTCGTCTCCCAGTAGCGCCCGCATACTTCAGCGCTGAGGTACTGTCCGTCGCGCTCGCCGGCGGGCCTAGG
GCCGATGGTAAAGGGGGCAGGCGC-GGGGCCCGACGCGGTGGCGATGCGG---CCTCATTTTTCACGGAGCCGCGGCGGC
GTCCCGACGAGGAGCCAGCCTCGCGGTCGTGCTTGCCCTTGTTGCCGTAGTTCCAGAGCCCCATGGCTACGAGGCGGCCG
GCCTGCAAGTTCGAGGCTAGGGTTT--------GGGGGTGTCGGGTTTCGAGGAGGCCGCGGGGTGGAGT-GGGGAGTGT
GGACGATGACCGGTCCACGGCTTCGGCATTTAAGAAGGGCCGTGACCTTTC-CCTGGGCGGATGACAGGCGTACCCGGCC
GCACGTGCGTATTGATGTTGGCGGGTGTGAGGTAGGTGGCCGCCTGCCATGCGGCCCCGACGCGAACGAG-CC-CGCGTC
CGTTTGCTGTCCGCCACGAGCCAAACCCGACACATGTTTGCGCTCGAAATGGGTCGGCCCGGACACAAAATAGAAAAGAT
GGGTCTGGGCGTTTGCGCGCTGAGCTGATCGGTTTGTCGCTTTTACCCCAAACAGACGGGGTCGAACAGGATGGGGTCGC
GCGGTGGAGTTGGCCTAACAAATCCATCACCG-TTGTACATCCCAAACCCCTGAGAGCCAATGTTATCTCCCC-TCTACC
TTCTTATAAAAC-CCCCATTCCCTCTACTTTCCCACACTACCTTCGTCCTTCCTTTTTTGTTCTTCTCAACTCATACAGT
TTAGTTGT---TATC---TTTCCCTGTTCTTCGCGCGCATTATCGTCTCTGGTGCTCCTCTTCGGGAGATCTGAACGACG
AACTTGAATA-TCTGCTGGGGAAGGACGTCCTATATTTTT--------TTTGTAAAACAAAAAAGATTCGGTTTCTGTTA
TTTATGCACAACGTTGGCAACT---GCCATCGGCTGTTCCTCTCGTCCAAAG-CCATCTTCTTGCATCAAGCGCCGCCAT
GGCAACGCCCCAGAGCGGCAGCCCGAGCCCAGCGACCACGGCGGCGTCGGCGGTGGAGACGAGCAAACACTGGGCGCCGC
ATGGCCCGATGCTGATGGCCTGCCTCGTCAGCATCAACTTGCTCATGATCCTCCTCGTCTTCTTCTACTTCTGGCGGTTC
TTCTCCGGGAAGCGAGGGCCGTCATCCCCCGGCGGCGCTGATGAGGAGGCGTCATCGGCCGACTCGTCTCCGGCGACCTC
GCCGAGAGCGTCAAGGCGCCTGCGTGACTCCGACCAACCGGACATCCCGTCTTCCCTGCCCGTGTCCGTGTTCGACTCCA
GCAGCGAAGCCGCCGGGAAGGCGGCGGCCGACTGCGCGGTGTGCATCGTGGAGTTCCGGGACGGCGACCTGGCGCGCCTC
CTACCTCGCTGCGGGCACCGATTCCACGCCGCGTGCGTGGACGCGTGGTTGCATCTACACTCCACGTGCCCGCTCTGCCG
CGCCAGCGTGGTCGCCCCTGTGCCCGCCGCCGCCGAGCCCAAGAACGACTACAAAGACGACGGCCCGGAGTGCCCGGTGT
GAGGCAGATCT--GCGCGCACCGGCGAGGCGCCGAGCTACCAAAGGCAAGCCAGAGGAGCACGTAAACGGCGGAAGACGA
CACGCATATCCCGGCGTCTGTGT--TGCTGTCCCTTAGCTGACCCCTGCAGGTCGGAGAGGTACGGTCGGCTCCGTTCGG
CGTCTCCTGTTTTGTTGTGTTCTTGTTATC---CATATATATATCTCCCTCTATTCAGTTTTTCTGATCGGTGTGATAAA
CATTTGGATCAGTGGCTCCTTCTATATGACGATG----TGTGCGTGTGATTGGAATTGTAAGATTAGAAACATGTAGGGG
TATAT---CATA-TAGACTTGCATATGTGTTACT--GTGTGTGCGTGACAGAATTAATAGTGTAAGATCGTAGTATCGTA
---CATATGTGAGTTA-TAATGGAAAGCTCTGATCGACATTTTTGGGCATGGTCGTCCAGTTGAAAACTTCTTCTTTTGG
CCATGTTGATAGGTACCTCTACATA-TTTTTTTGAGGGACGGTACCTCATTACATGGTTCTACAAGAAGGAGAAAAATGC
TTTTCTTTCAGCCGGGAAAGTAGAAGTCCAATTAAACTTATGAGATTAGGCTAGTTAGGAG-TATATACACTAGTATCGT
ATGCATGATAGTGTATGGTATCTCTATAGTGCATAATATCAACGACCGTATTTATCGTTTTCTATAGCTCATAGTAGTGC
CACATT-TTTTATTAGATCATACTAATGATATCGTATAATACTATGCCAC-TTTATTGTATCCTCTCTTTCTCAATCAAT
ACTA----TGTCATATCAGCAATATGGTTAGTTGGTGGCATGAGCCTGCATGA---TACTTGGTTAATGGTTATGACACA
CCATTCTGTGAGGTCTTGAGGAACGAGCATACTAAACACACAAGTGGAACTCCTTTCAACAAGAAACAGTCAAGTGGAGC
TCACCGGAGTAGTAGGAAACTTCCTTCGTTTACAACATGCATGAAAGATCTACTTCAGTGACTTCGGCCATTAA
>chr1B_1
ACCGTCGTCCTCGTCTCCCAGTAGCGTCGGCATACATCAGCGCTGAGGTACTACCGGTCGCGCTCGCCGGCGGGCCTAGG
GGCAATGGTGAAGGGGGCAGGCGCGGGGGCCCGGCGCGGTGGCAATGCAG---CCTTGTTTTTCACGGAGCCACGGCAGC
GTCCCGACGAGGAGCCAGCCTAGCGGCCGTGCTTCCCCTCGCGGCTGTAGTTCTTAAGCCCCATGGCTGCGAGGCGGCCG
GCCGAGGAGTTCGAGGCTAGGGTTT--------GGGAGTGTCGGGTTTCAAGAAGGCCGCGGGGTGGAGT-GGGGAGTGT
GGACGACGACCGGTCCACGACTTCCGCATTTAAGAAGGACCGCAATCTTTC-CCTGGGCGGATGACAGGCGGGCCCGGCC
GCGCGTGCGCATTGATGTTGGCGGGTGGTAGGTAGGTGGCCGCCTGCAACGCGGCCCCGGTGCGGACGAG-CG-CGCGTC
CGTTTGCTGTCCGCCGCGACCCAAACCCGGCGCATGTTTGCGCTCGAAATGGGTCGGCTCAGCCACAAAACGGGCAGGAT
GGGTCTGTGCCGTCGCACGCTGGGCCGACCGGTTTGTCCTTTTTACCCCAAACGGACGGGGCCGGACGGGATTGGGTCGC
GCGGTGGAGTTGGCCTAA--------------------------------------------------------------
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>chr1B_1
ACCGGCGTCCTCGTCTCCCAGTAGCGCCGGCACACATCGGCGCTGAGGTACTGCCGGTCGCACT-GCCGGCGGGCCTAGG
GGCGATGGTGAAGGGGGCAGGCGTGGGGGCCCGTCGTGGGGGCGATGAGG---CCTCCTTTTTCATGGAGCCGGGGCGGC
GTCCCGACGAGGAGCCAGCCTCACGGTCGTGCTTCCCCTTGGGGCCGTAGTTCCACAGGCCCATGGCTGCGAGGCGGCCG
ACCGGCGAGTTTGATGCTAGGGTTT--------GGGAGTGTCGGGTTTCGAGAAGGCCGCGGGGTGGAGT-GGGGAGTGT
GGACGACGACCGGTCCACGGCTTCCGCATTTAAGAACGACCGCGA-CTTTC-CCTGGGCGGATGACAGGCGGGCCCGGCC
GCGCGTGCGCATTGATGTCGGCGGGTGGGAGGTAGGTGGCCGCCTGCCACGCGACCCCGACGCGGACGAG-CG-CGCGTC
CGTTTGCTGTCCGTCGCGACTCAAAACCGGCGCATGTTTGCGCTCAAAATAGGTCGGCCCGGACATAAAACGAACATGAT
GGGTCCGGGCCGTCGCGCGCTGGGCCGACCGATTTGTCCATTTTTTTCCAAACGGACGGGGGCGGACGGGATGAGGTGGC
GCGGTGGAGTTGGCCTAA--------------------------------------------------------------
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>chr7D_1
ACCGGCGTCCGCGTCTCCCAATAACGCCGGCACACGTCCACGCCCAGGTACTGTCGGTCGCGCTCGCCTGCGGCCCTAGG
GGCGATGCTGAACGGGGCAGGCGCGGGGGCCCGATGCGGCAGCGAAGCGGCCTCCTC---TTTCACAGAGCCGCGGCGGC
GTCCCGAGGAGGAGCCGGCCTCGCAGTCGTGCTTCCCCTTGCGGCCGTAGTTCCAGAGCCCCATGGCTGCGAGGCGGCCA
GCCGGCGAGTTCGAGGCTAGGGTTT--------GGTGCTGTCGGGTTTCGAGGAGGCCGCGGGGTGGAGC--GGGAGTGT
GGACGACGACCGGTCCACGGCTTCCCCATTTAAGAAGGACCGCGACCGTTCGCCTGGGCAGATGACAGGCGGGGCCGGCC
GCGCGTGCGCATTGATGTTGGCAGGTGGGAGGTAGGTGGCCGCCTGCCACGCGGCCCCGATGCGAACGAG-CGACGCGTC
CGTTCGGTGTCCACCGCGACCCAAATCCGGCGCATGTTTGCGCTTGAAATGGGTCAGCCCGGACACAAGACGGACCAGAT
GGATCCGGGCCGTCGCGCGCTGTGCCGATCGGTTTGTCCCTTTTATCCCAAACGGACGGGGCCGAACAGGATGGGGTCGC
GCGGTGGAGTTGGCCT----------------------------------------------------------------
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--------------------------------------------------------------------------
>chr3B_1
ACCGGCGTCCTCGTCTCCGAGTAGCGCTGGCACACATCGGCGCTGAGGTACTGCCTGTCGCGCTCGCCGGTGGGCCTAGG
GGTGATGGTGAAGGGGGCCGGCACGTGGGCCCAGCGCGGGGGCCATGCAG---CCTCCTTTTTCATGGAGCCACGGCGGC
GTCACGACGAGGAGCCAGCCTCGCGGTCGTGCTTCCCCTTGCGGCCGTAGTTCCACAGGCCCATGGCTGCGAGGCGGTCG
GCCGGTGAGTTCGAGGCTAT--------GGTTTGGGATTGTCGGGTTTCGAGAAGGCCGCGGGGTGGAGT-GGGGAGTGT
GGACGACGACCAGTCCACGGCTTCCGCAATTAAGAACGACCGCGG-CGTTTTCCTGGGCGGATGACAGGCGGGCCCGGCC
GCGCGTGCGCATTGATGTTGGCGGGTGGGGGGTATGTGGCCGCCTGCCATGCGGCCCCGACGCGGATGAG-CG-CGCGTC
CGTTTGCTGTCCGCAGCGACCCAAAACCGGCGCATGTTTGCGCTTGAAATGGGTCGGCCCGAACATAAAACGGATAGGAT
GGGTCTGGGCCGTCACGTGCTGAGCCGACCGGTTTGTCTCTTTTACCACAAACGGACGGGGCCTGACGGGATGGGGTCGG
GCGGTGGAGTTGGCCT----------------------------------------------------------------
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>chr4D_1
ACCGGCGTCCTCGTCTCCCAGTAGCGCCGGCATACCTCCACGGACAGGTACTGTCAGTCGCGCTCGCCGGCGGCCCTAGG
GGCGATGGTGAACGGGGCAAGCGCGGGGGCCCGACGCGGCGGCGAAGCGG---CCTCCTGTTTCACGGAGCCACGACGGC
GTCCCGAGGAGGAGCCGGTCTCGCGTTCGTGCTTCCCCTTGCGGCCGTGGTTCCAGAAGCCCATGGCTGCGAGGCAGCCG
GCTGGCGAGTTCAAGGCTAGGGTTT--------GGTGCTGTCGGGTTTCGAGGAGGCCGCGGGGTGGAGT--GGGAGTGT
GGACGACGACCGGTCCACGGCTTCCCCATTTAAGAAGGACCATGACCGTTCGGCTGGGTGGATGATAGGCGGGGCCGCCC
GCGTGTGCGCATTGATGAGGGCGGGTGGGAGGTAGGTGGCCGCCTGCCACGCGGCCCCGATGCGGACAAG-CGACGCGTC
CGTTTGGTGTCCGCCGGGACCCAAACCCGGCGCATGTTTGCGCTCGAAATGGGTCGGCCCGGACATAAAACGGACCAGAT
GGGTCCGGGCCGTCACGCGCTGGGCCGACCGGTTTGTCCCTTTTACCCCAAACGGACGAGGCCGGACAAAATGGGGTCGT
GCGGTGGAGTTGGCCTAAC-------------------------------------------------------------
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--------------------------------------------------------------------------
>chr6D_3
--CGGCGTCCTCGTCTCCCAATAGCGGCGGCATACGGCGGCCTCGATGTAGTGCCGGTCGCGCTCGTCGGGGCCCGTGGG
GGCGATGGAGAACGCGGGCGGCGCGGGGGCCCGACGCGGTGGTGATGCGGGCTCCTCCTTCTTCACGGAGCCGCGGCGGC
GTCCCGACGAGGAGCCAGCCTCCCGGTCGTGCTTCCCCTTGCGGCCGTAGTTCCATAGCCCCATGGCTGCGAGGCTGCCG
GCCGGCGAGTTCGAGGCTAGGGTTTTGGGGTTTGGGGTTGTCGGGTTTCGAGGAGGCCGCGGGGTGGAGTGGGCGAGTGT
GGACGACGACCGGTCCACGGCTTCCCCATTTAAGAAGGACCGTGACCGTTCGCTTGGG-GGATGACAGGCGGGCCCGGCC
GCGCGTGCGCGTTGATGTTGGCGGGTGGGAGGTAGGTGGCCGCCTGCCACGCGGCCCCGACGCGGACGAG-TGACGCGTC
CGTTTGGTGTCCGCCGCGACCCAAACCCGGCACATGTTTGCGCTCGAAATGGGTCGGCCCGGACACAAAACGGACCAGAT
GGGTCCGGGTCGTCACACGCTGGGCCGCCTCATTTGTTCCTTTTACCCCAAACGGACGGGGCCGGACGGGATGGGGTCGC
GCGGTGGAGTTGGCCTTACA------------------------------------------------------------
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--------------------------------------------------------------------------
>chr5D_3
--CGGCGTCCTCGTCTCCCAATAGCGGCGGCATACGGCCGCCTCGATGTAGTGCCGGTCGCGTTCGCCGGCGGCCGTGGA
CGCGAT-GAGAAAGCGGGTGGCGCGGGGGCCCGACGCGGTGGTGATGCGGGCTCCTCCTTCTTCACGGAGCCGCGGCGGC
GCCCCGACGAGAAGCCAGCCTCGT-GTCATGCTTCCCGTTGCGGCCGTAGTTCCATAGCC-CATGGCTGCGAGGCGGCCG
GCCGGCGAGTTCGAGGCGAGGCGA---GGGTTTGGGGTTGTCGGGTTTCGAGGAGGCCGCGGGGTGGAGTGGGGGAGTGT
GGACGACGACCGGTCCACGGCTTCCCCATTTAAGAAGGACCGCGACCGTTCGCCTGGGCGGATGACAGGCGGGGCCGGCC
GCGCGTGCGCATTGATGTCGGGCGGTGGGAGGTAGGTGGCCGCCTGCCACGCGGCCCCGACGCGTACGAGGCG-CGTGTC
CGTTTGGTGTCCGCCGCGACCCAAACCCGGTGCATGTTTGCGCTCGAAATGGGTCGGCCCGGACACAAAACGGACCAGAT
GAGTCCGGGCCGTCGTGCGCTGGGCCGCCTCGTTTGTCCGTTTTACCCCAAACAAACGGGGCCGGACAGGATGGGGTCGC
GCGGTGGAGTTGGCCTTACA------------------------------------------------------------
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--------------------------------------------------------------------------
>chr3B_4
---GGCGTCCTCGTCTCCCAGTAGCGCCGACATACATCAGCGTTGATGTACTGCCGGTCGCGCTCGCCGGCGGCCCTAGG
GCTGATGGTGAAGGGGGCAGGCGCGGGGGCCCGACACGGGGGTGATGCGGCCTCCTCCTTTTTCATGGAGCCGCGGCGGC
GTCCCGGTGAGGACCCAGCCTTGCGGTCGTGCTTCCCCTTGCGGCCGTAGTTCTAGAGCCCCATGGCTGCGAGGCGGCCG
GCCGGCGAGTTCGAGGCTAGGGTTT--------GGGGGTGTCGGGTTTTGAGGAGGTCGCCGGGTGGAGT-GGGGAGTGT
GGACGACGACCGGTCCACGGCTTCCCCATTTAAGAAGGACCGCGACCGTTCACCTGAGCGGATGACAGGCAAGCCCGGCC
GCGCGTACACATTGATGTTGGAGGGTGGGAGGTAGCTGGCCGCCTGCCACGCGGCCCCGACGCGAACGAG-CG-CGCGTC
CATTTGCTGTCTGTCGCGACCCAAATCCGGCGCATGTTTGTGCTCGAAATGGGTCGGCCCGGACACAAAACGGACAAGAT
GTGTCCGGGCCGTCGCGCGCTGGGCTGCCCGGTTTGTTCATTTTACCCCAAACGGTCGGGGACGAATGAGATGGGATCGC
GCGGTGGAGTTGGCCTGACA------------------------------------------------------------
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>chr7D_6
-----CGTCCTCGTCTCCCAGTAGCGCTGGCATACATCAGCGTTGATGTACTGCCGGTCGCGCTCGCCGGCGGCCCTAGG
GCCAATGGTGAAGGGGGCAGGCGCGGGGGCCCGACGCGGTGGCAATGCGGGCTCCTTCTTTTTCATGGAGCCACGGCGGC
GTCCCGACGAGGAGCCAGCCTCGCGGTCGTGCTTCCCCTTGCGGCCGTAGTTCCAGAGCCCCATGGCTGCGAGGCGGCCG
GCCGGCGAGTTCGAGGCTAGG--------GTTTGGTGCTGTCGAGTTTCGAGGAGGCCGCGGGGTGGAGT-GAGGAGTGT
GGACGACGACCGGTCCAGGGCTTCCCCATTTAAGAAGGACCGCGACCGTTCGCCTAGGCAGATGACCGGCGGGGCTGGCC
GCGCGTGCGCATTGATGTTGGCGGGTGGGAGCTAGGTGGCCGCCTGCCACGCGGCCCCGGCGTGGACGAG-CGACGCGTC
CGTTTGCTGTCCGCCGCGACTCAAACCCGGCGCATGTTTGCGCTCGAAATGGGTCGGCCCGGACACAAAACGGACCAGAT
CGGTCCGGGCCGTCGAGCGCTGGGCCGACCGGTTTGTCCCTTTTACCCCAAACGGACGGGGACGGACAGGATGGGGTCGC
GCGGTGGAATTGGCCTAAC-------------------------------------------------------------
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>chr1D_640
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---------------TAACAAACTCATCACCATTTGTACATCCCAAACCCCCAAGAGCCAATGTTATCTCCCCCTCCACC
TTCTTATAAACC-CCCCATTCCCTCCACTTTCCCACACTACCTTCGTCCTTCCTTTTTTGTTCTTCTCAACTCATACAGT
TTAGTTGC---TATG---TTTCCCTGTTCTTCGCGCGCATTCTCGTCTCTGGTGCTCCTCTTCTGGAGATCTGAAGGACG
AACTTGAATA-TCTGCTGGGGAAGGACGTCCTATATT-TT--------TTTGTAAAACAAAAAAGATTCGGTTTCTGTTA
TTTATGCACAACGTTGGCAACTGCCGCCATCTGCGGTTCCTCTCGTCCAAAG-CCATCTTCTTGCATCAAGCGCCGCCAT
GTCAACGCCCCAGAGCGGCGGCCCGAGCCCAGCGACCACGGCGGCAGCGGC---GGAGACGAGCAAACACTGGGCGCCGC
ATGGCCCGATGCTGACTGCCTGCCTCGTCAGCATCAACGTGCTCATGATCCTCCTCGTCTTCTTCTACTTCTGGCGGTTC
TTCTCCGGGAAGCGGGAGCCGTCATCCCCCGGCGGCGCCGATGAGGAGGCGTCATCGACCGACTCGTCTCCGGCGACCTC
GCCGAGAGCGTCGAGGCGCCTGCGTGACCCCGACCAACCGGACATCCCGTCTTCCCTGCCCGTGTCCGTGTTCGACTCCA
GCAGCGAAGCCGCCGGGAAGGCGGCGGCGGACTGCGCGGTGTGCATCGTGGAGTTCCGGGACGGCGACCTGGCGCGCCTC
CTCCCTCGCTGCGGGCACCGATTCCACGCCGCGTGCGTGGACGCGTGGTTGCATCTACACTCCACGTGCCCGCTCTGCCG
CGCCAGCGTGGTCGCCCCTGTGCCCGCCGCCGCCGAGCCCAAGAACGACTCCAAAGACGACGGCCCGGAGTGCCCGGTGT
GAGGCAGATCT--GCGCGCACCGGCGAGGCCCCGAGCTACCAAAGCCAAGCCAGAGGAGCACGTAAACGGCGGAAGGAGA
CACGCATATTCCGGCGTCGGTGT--CGCTGTCCCTTAGCTGACTCCTGCAGGTCGGCGAGGTACGGTCGGCTCCGTTCGT
CGTCTCCTGCTTTGTTGTGTTCTTGTTATC---CATATATAT--CTCCCTCTCTTCAGTTTTGCTGATCCGTGAGATACA
CATTTGGATCAGTGGCTTCTTCTATATGACGATG----TGTGCGTGTGATTGGAATTGTAAGATTAGAAACATGTAGGGG
TATAT---CATATTAGACTTGCATA--------T--GTGTGTGCATGACAGAATTAATAGTGTAAGATCGTAGTATCGTA
---CATATGTGAATTA-TAATGGAAAGCTTTGATCGACATTTTTGGACATGGTTGTCCAGTTGAAAACTTCTTCTTTTGG
CCATGTTGATAGGTACCTCTACATTTTTTTTTTGAGGGACGGTACCTCATTACATGATTCTACAAGAAGGAGAAAAATGC
TTTTCTTTCAGCCGGGAAAGTAGAAGTCCAATTGGACCGATGAAATTAGGCTATTAGGAGTATATATACAGTAGTATGAT
ATGCATGATA------------TCTCTAGTGCATAGTACGGATG--CGTATTTATTGTTTTCTATAGCTCATAGTAGCGC
CACATTTTTTTATTATACGATATTAATGATATCCTATAATACTATGCCACATTTATTGTATCCTCTCTTTCTCAATCAAT
ACTACGTATGTCATATCAGCAATATGGTTAGTTGGTGGCATGAGCCTGCATGATACTACTTGGTTAATGGTTATGACACA
CAATTGTGTGAGGTCTTAAGCAACGAGCATACTAAACACACAAGTGGGACTCCTTTCAACAAGAAACTGTCAAGTGGAGC
TCACCCGAGTAGTAGGAAACTTCTTTTATTTACAACATAATCTAATGATCTACTTCAGTGACTTCGGCCATTAA
>chr1A_640
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---------------TAACAAACCCATCACCATTTGTACATCTCAAACCCCCGAGAGCCAATGTTATCTCCCC-TCCACC
TTCTTATAAACC-CCCA--TCCCTCCACTTTCCCACACTACCTTCGTCCTTCCTTTTTTGTTCTTCTCAACTCATACAGT
TTAGTTGCTACTATC---TTTCCCTGTTCTTGGCGCGCATTATCGTCTCTGGTGCTCCTCTTCTGGAGATCCGAACGACA
AAGTTGAATATTCTGCTGAGGAAGGACGTC---TATA-TT--------TTTGTAAAACAAAAAAGATTCGGTTTCTGTTA
TTTATGCACAACGTTGGCAACT---GCCATCTGCTGTTCCTCTCGTCCAAATCCCATCTTCTTGCATCAAGCGCCGCCAT
GTCAACGCCCCAGAGCGGCAGCCCGAGCCCAGCGACCACGGCGGCGTCGCCGGTGGAGACGAGCAAACACTGGGCGCCGC
ATGGCCCGATGCTGACGGCCTGCCTCGTCAGCATCAACGTGCTCATGATCCTCCTCGTCTTCTTCTACTTCTGGCGGTTC
TTCTCCGTGAAGCGGGGGCCGTCTTCCCCCGGCGGCGCCGATGAGGAGGGGTCATCCACCGACTCGTCTCCGGCGACCTC
GCCGAGAGCGTCTAGGCGCCTGCGTGACCCCGACCAACCGGACATCCCGTCTTCCCTGCCCGTGTCCGTGTTCGACTCCA
GCAGCGAAGCCGCCGGGATGGCGGCGGCGGACTGCGCGGTGTGCATCGTGGAGTTCCGGGACGGCGACCTGGCGCGCCTC
CTCCCTCGCTGCGGGCACCGATTCCACGCCGCGTGCGTGGACGCGTGGTTGCATCTACACTCCACGTGCCCGCTCTGCCG
CGCCAGCGTGGTCGCCCCTGTGCCCGCCGCCGCCGAGCCCAAGAACGACTCCAAAGACGACGGCCCGGAGTGCCCGGTGT
GAGGCAGATCT--GCCCGCACCGGCGAGGCGCCGAGCTACCAAAGCCAAGCCAGGGGAGCACGTAAACGGCGGAAGACGA
CACGCATATTCCGGCGTTTGTGT--CGATGTCCCTTAGCTGACTCCTGCAGGTCGGCGAGGTACGGTCGGCTCCGTTCGT
CGTCTCCTGTTTTGTTGTGTTCTTGTTATC---CATACATAT--CTCCCTCTATTCAGTTTTGCTGATCGGTGAGATGCA
CATTTGGATCAGTGGCTTCTTCTATATGACGATG----TGTGCGTGTGATTGGAATTGTAAGATTAGAAACATGCAGGGG
TATAT---CATA-------------------------TGTGTGCGTGACAGAATTAATAGTGTAAGATCGTAGTATCGTA
---CATATGTGAATTA-TAATGGAAAGCTTTGATCGACATTTTTGG-CATGGTCGTCCAGTTGAAAACATCTTCTTTTGG
CCATGTTGATAGGTACCTCTACATA-TTTTTTTGAGGGACGGTACCTCATGGTTCTAC--------AAGGAGAAAAATGC
TTTTCTTTCAGCCGGGAAAGTAGAAGTCCAATTGAACCGATGAAGTTAGGCTAGTTAGGAG-TATATACACTAATATCAT
ATGCATGATAGTGTATGATATCTCTATAGTGCATAGTATCGACTACCGTATTTATTGTTTTCTATAGCTCATAGTAGCAT
CACA-TTTTTTATTATACGATATTAATGATATCGTATAATAATGTGCCACATTTATTGTATCCTCTCTTTCTCAATCAAT
ACTA----TGTCATATCAGCAATATGGTTAGTTGGTGGCATGAGCCTGCATGA---TACTTGGTTAATGGTTATGTCACA
CCATTGTGTGAGGTCTTAAGGAACGAGCATACTAAAAACACAAGTGGAACTCCTTTCAACAAGAAACAGTCAAGTGGAGG
TTACCGGAGTAGTAGGAAACTTCTTTCATTCACAACATGCTTGAATGATCTACTT-AGTGACTTCGGCCATTAA
>chr1D_649
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------------------------CATCACCATTTGCACATACCAAA-CCCCAAGAGCCAATATTATCTCATCCTCCACC
CTTTTATAAACCCCCCCATTCTCTCCACTTTCCTACACCACCTTCGTCCTTCCGCTTTTCTTCTTCCCCATTCTTAGTTG
CTAC----------T---TTTCCCTGTTCTTCGGGTGCATTCTCGTCCCTCGTGCTCCTTTT----AGTTACCAACGACA
AAGTTGATAA-TCTGCTTGGGAAGGACGCCCTTTTTCG---TTTGTAATTTGTAAAACAAGAAAGATTCGGTCTGTGCTA
TTTATGCACACCATTGGCAACT---GCCATCTGCCGTTCCACTCGTCCGAAG-CCATCTTCTTGCATCAAGCGCCACCAT
GTCAACGCCCCAGAGCGGCAGCGCGAGCCCAGCGACCACGGCGGCGGCGGCGGTAGAGACGAGCAAGCACTGGGCGCCGC
ACGGCCCGATGCTGACGGCCTGCCTCGTCAGCATCAACGTGCTAATGATAGTCCTCATCTTCTTCTACTTCTGGCGGTTC
TTCTCCGGGAAGCGAGGGCCGTCTACCCCCGGAGGTGCTGATGAGGAGTCGTCATCGACCGACTCGTCTCCGGCGACCTC
GCCGAGAGCGTCCAGGCGACTGCGCGACCCCGAGCAGCCGGACATCCCGTCTTCCCTGCCCGTGTCCGTGTTCGACTCCA
GCAGCGAAGCCGCCGGGAAGGCGGCGGCCGACTGCGCGGTGTGCATCGTGGAGTTCCGGGACGGCGACCTGGCGCGCCTC
CTCCCTCGCTGCGGGCACCGGTTCCACGCCGCGTGCGTCGACGCGTGGCTGCATCTACACTCCACGTGCCCGCTCTGCCG
CGCCAGCGTGGTCGCCCCTGCGCCCGCCGCCGCCGAGCCCAAGAACGACCCAAAAGACGACGGCGCGGAGTGCCCGGTGT
GAGGCGGATCT--GCGCGCGCCGGCGAGGCCGCGTGCTACCAAAGCCAAGCCAGAGGAGCACGTAAACGGCGGAAGGCGA
CACGCATCTTTCGGCGTCGGTGTGTCGCTATCCCTTAGCTGACTCCTGCGGGTCGGCGAGGTACGGTTGGCTTCGTTCCT
CGTCTTTGGGTTTGTTGTGTTCTTGTTACTATACGTATCTCT--CTGGCTCTCGTCAGTTTTGGTGATCGGTGAGATGCA
TATTTGAATCGGAGTCTTCTTCTATATGATGATGATGATGTGCGTATGATTGGAATTGTAAGATTAGCAACATATA----
--TAT---TAGATTAGGCTCGCGTG--------TGATTGTGTGCGTGACAAAATTAGTAGTGTAAGATCATA------TA
---CATATGTAAATTATTAATGAAAAGGTTTGATCGACATTTTTGGGCATGGCCATCAAGTTGAAAATATGCTCTTTCGG
CTATGTTGATGGGTACCT--------------------------------------------------------------
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>chr1A_649
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------------------------CATCACCATTTGCACATACCAAA-CCCCAAGAGCCAATATTATCTCCCCCTCCACC
CTTTTATAAACCCCCC-ATTCGCTCCACTTCCCTACACCACCTTCATCCTTCCGCTTTTCTTCTTCCCCATTCTTAGTTG
CTAC----------C---TTTCCCTGTTCTTCGGGTGCATTCTCGTCCCTCGTGCTCCTTTT----AGATACCAACGA--
-------TAA-TCTGCTT-GGAAGGACGTCCTTTTTCT---TTTGTAATTTGTAAAACAAGAAAGATTTGGTCTGTGCTA
TTTATGCACATCATTGGCAACT---GCCATCTGCTGTTCCACTCGTCCGAAG-CCATCTTCTTGCATCAAGCGCCACCAT
GTCAACGCCCCAGAGCGGCAGCGCGAGCCCAGCGACCACGGCGGCGGCGGCGGTGGAGACGAGCAAACACTGGGCGCCGC
ACGGGCCGATGCTGACGGCCTGCCTCGTCAGCATCAACGTGCTAATGATCCTCCTCATCTTCTTCTACTTCTGGCGGTTC
TTCTCCGGGAAGCGAGGGCCGTCTACCCCCGGAGGTGCTGATGAGGAGTCGTCATCGACCGACTCGTCTCCGGCGACCTC
GCCGAGAGCGTCCAGGCGCCTGCGCGACCCCGACCAGCCGGACATCCCGTCTTCCCTGCCCGTGTCCGTGTTCGACTCCA
GCAGCGAGGCCGCCGGGAAGGCAGCGGCCGACTGCGCGGTGTGCATCGTGGAGTTCCGCGACGGCGACCTGGCGCGCCTC
CTCCCTCGCTGCGGGCACCGGTTCCACGCCGCCTGCGTGGACGCGTGGCTGCATCTACACTCCACGTGCCCGCTCTGCCG
CGCCAGCGTGGTCGCCCCTGCTCCGGCCGCCGCCGAGCCCAAGAACGACCCGAAAGACGACGGCGCAGAGTGCCCGGTGT
GAGGCGGATCTCTGCGCGCGCCGGCGAGCCCGCGAGCTACCAAAGCCAAGCCAGAGGAGCACGTAAACGGCGGAGGGCGA
CACGCGTCTTTCGGCGTCGGTGTGTCGCTATCCCTTAGCTGACTCCTGCGGGTCGGCGAGGTACGGTTGGCTTCCTCGGT
CGTCTTCTGTTTTGTTGTGTTCTTGTTACTATACATATCTCT--CTCGCTCTCTTCAGTTTTGGCGATCGGTGAGATGCA
TATTTGGATCGGAGTCTTCTTCTATATGTTGATGATGATGTGCGTATGATTGGAATTGTAAGATTAGCAACATATA----
--TATTGCTAGATTAGGCTCGCGTG--------TGAGTGTGTGCGTGACAGAATTAGTAGTGTAAGATCATA------TA
GTACATATGTAAATTATTAATGGAAAGCTTTGATCGACATTTTTGGGCATGGCCATCAAGTTGAAAATATGTTCTTTCGG
CTATGTTGATGGGTACCT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr1B_666
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CCAAA-CCCCAAGAGCCAATATTATCTCCCCCTCCGCC
CTTTTATAAACC-CTCCATTCGCTCCACTTTCCTACACCACCTTCATCCTT-CGCTTTTGTTCTTCCCCATTCTTAGTTG
CTAC----------TACCTTTCCCTCTTCCTCGCGTGCATACTCGTCCCTCGTGCTCCTTTT----AGATCCCAACGACA
AAGTTGATCA-TCTGCTT-GGAAGGACGTCCTTTTTT-TTCTTTGAAATTTGTAAAACAAGAAAGGTTCGGTCTCTGCTA
TTTATGCACACCATTGGCAACT---GCCATCTGCTGTTCCACTCGTCCAAAG-CCATCTTCTTGCATCAAGCGCCACCAT
GTCAACGCCCCAGAGCGGCAGCGGGAGCCCAGCGACCAC---GGCGGCGGCGGTGGAGACGAGCAAACATTGGGCGCCGC
ATGGCCCGATGCTGACGGCCTGCCTCGTCAGCATCAACGTGCTAATGATCCTCCTCATCTTCTTCTACTTCTGGCGGTTC
TTCTCCGGGAAGCGAGGGCCGTCTAGCCCCGGAGGTGCTGACGAGGAGTCGTCATCGACCGACTCGTCTCCAGCGACCTC
GCCGAGAGCGTCCAGGCGCCTGCGCGACCCCGACCAGCCGGACATCCCGTCTTCCCTGCCCATGTCCGTGTTCGACTCGA
GCAGCGAAGCCGCCGGGAAGGCGGCGGCAGACTGCGCGGTGTGCATCGTGGAGTTCCGCGACGGCGACCTGGCGCGCCTC
CTCCCTCGCTGCGGGCACCGGTTCCACGCCGCGTGCGTCGACGCGTGGCTGCATCTACACTCGACGTGCCCGCTCTGCCG
CGCCAGCGTGGTCGCCCCTGAGCCCGCCGCCACCGAGCCCAAGAACGACCCAAAAGACGACGGCGCGGAGTGCCCGGTGT
GAGGCGGATCT--GTGCGCGCCGGCGAGGCCGCGAGCTACCAAAGCCAAGCCAGAGACGCATGTAAACGGCGGAAGGCGA
CACGCGTCTTTCGGTGTCGGTGTGTCACTATCCCTTAGCTGACTCCTGCGGGTCGGCGAGGTACGGTTGGCTTCGTTCCT
CGTCTTTGGGTTTGTTGTGTTCTTGTTACTATACATATCTCT--CTGGCTCTCGTCAGTTTTGGTGATCGGTGAGATGCA
TATTTGAATCGGAGTCTTCTTCTATATGATGATGATGATGTGCGTATGATTGGAATTGTAAGATTAGCAACATATA----
--TAT---TAGATTAGGCTCGCGTG--------TGATTGTGTGCGTGACAGAATTAGTAGTGTAAGATCATA------TA
---CATATGTAAATTATTAATGAAAAGGTTTGATCGACATTTTTGGGCATGGCCATCAAGTTGAAAATATGCTCTTTCGG
CCATGTTGATGGGTACCT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>SNPs
----------------------------S------S-------------------S------------------------
---------S-----------------------------------------------S----------------------
----------------------------------S------SS-------------------------S-----------
---S--S-------------------------------------------------------------------------
------S-----------------S-------------S--------------------------------SS-------
--S------S-----------------S--------------------------------------------S-------
---------------S---S---------S----------------------------------------SS--S-----
----------SS-S------------------------S----------------------S------------------
----------------------S--------S-------------------S------------------------S---
----------S--------------S------------------------------------------------------
-------S-------------------------------------------------------S----------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
-S------------------------------------------------------------------------------
---------------S----------------------S-----------------------------------------
---------------------------------------------------------S----------------------
------------S---------------S---------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------------------------S----------------------------------
---------S---------------S-----------------S------------S----------------------S
------------------------------------------SS------------------S----------S----S-
-----------------S--------------------------------------------------------------
-------------------------SSSSSSSS-----------------------------------------------
------------S----------------S--------------------------------------------------
--------------------------------------------------------S-----------------------
---------------------------------S---SS----S----------------------------------S-
-----------------S-----------------S----S--------------S---------------------S--
---------------S-SS---S---------------------------------------------------------
--------------------------------------------------------------------------------
-----S-----------S--------------------------------------------------------------
-----------------------S---S------------S----S----------------------------
>forward_571
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AGAAAAGAT
GGGTCTGGGCG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_1952
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ACTGTGTGTGCGTGACAGAA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
