>input_sequence_75751
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--------------------------------------------------------------------------ACAATC
GCAATAATGAAGAACAGCAAAATAGCGCTCTTCCTGGCCATGTTGTTCCTGGTGATCTCCGCTTCTTCCGCTACCGCTCC
GAGAGATGCTCCAGCAGGCCTCGCCAAGAAAACCCATTCGGGCATCATGAACGGTATGCATAGTTCAACTCGTCACGCAC
TCGCTCGTTTAATTTTGGTTCTTTCTGAGGTTTGACTCTTCCGTAATCAGAGGCAAACGACGGTTTCGCTGAATCCAAAG
GAATAATCATGAAGAACCCAGTGTTCCGTCCTCCAAAGTACGCACCTTGTGCTTCCAAGGCCGTGCGCCCGAGCGGGGAC
ATCAAGGAAGAGAAGCTTTGCTAGGAGAGGAAGTCTCAAGTAACTAGCATCTGCGCATCATGTGAACTTGTAAACATGTA
CTTTCTCCATCCTAAAATAAGTGACTCAAAAGTGAGTCAACTTTGTATTAAAGTTAGTACAAAATTTAATTATTTTTGAG
TCATTTATTTTGGTACAAAGTTGACTCACTTTTGAGTCACTTATTTTGGGATGGAGGGAGTATGCCGGTTCTGAAATAAA
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----------------------
>chr1B_1_TraesCS1B01G118500
GGGAGTCGCGGCGTGCACAGACCAGCT-GTTGTCCTGCCGGCGTCCGACGAGCGTG--------CCGGCTTCCGACGAGC
GTGCAGGTGAGGATCTAGCCGGGCG------GCGAGGCGACTTCTTGGTC-GAGGGCGGTTGTGTGGTGGGGGG---CGC
GGGGGGTGGGAAGCAGTCGGCTCCT-GGCGGCAAGACGGCGATGGCGGGCGACGTGGGAGTGGGCGGCGTAGTTGTGCGG
ATGTGGAGGCCCCGGCAGCTGGCAGAGTCGCCGGCAAAAATGGGCGGCGGCGGCGGCGACGGAGGATGAGGGCG---AGG
GTCGTTGTTGGATGGGGGAGGGCAATGTGATTCAGACCAGCGGGCCC--GGAGGGAGGAGAGGGCGAGCGTGCG-----C
GCGTCCGTCGCGTGTCCGCGCTGACACAAATCCGGCTAAAAAATGG-CCGTGAATGGGTCGCCCACGGATGAAAAGCGGA
CCCGCGCGTCCGTTTGGGTCGGCCCGTTGGGCCGCCTTTTCTGTCCGCGCCGACCCAAAAGGAGGGCAGCGGACGAAATG
GGTAGCCCCGTTGAAGTTGCTCTAAC---ATCTCTTCTTTTTCATCGATCACTTGATCAACACCTATTTTCGGCTCTCTC
TCTCTCTGCTTATGAAATGAATGCCAGCTGGATCTTTAAAAAAAACTACTTTGTCGGAAACTAACAGCGGCCAGAACGTA
TCGCGCGTTGGCACGCGCGAAAATAAACTGCACGCACCTCCTCTTGGCATTAAACCGAAAAAAAGAAATTGATGTAAAAA
AGAAACCGGACAAGAAAAGGGGTTTCCCGGCTGGAGATATTGATTTCCGGGTTACATGCTATGCTACAGGACGTGTTAAT
GCTACACCGTAGCAAGATACGAATGTTAACTCCACCGTAGCTTTTGTCGCATCTAGTACTGTAGGATACATGCATGTGGC
TCCTCCTCGCCCAGACTAATCTGCTCGCATCAATCAGATTATAAATTGGGCACAAGAGCACCTCCCTGGTGCACACAATC
GCAATAATGAAGAACAGCAAAATAGCGCTCTTCCTGGCCATGTTGTTCCTGGTGATCTCCGCTTCTTCCGCTACCGCTCC
GAGAGATGCTCCAGCAGGCCTCGCCAAGAAAACCCATTCGGGCATCATGAACGGTATGCATAGTTCAACTCGTCACGCAC
TCGCTCGTTTAATTTTGGTTCTTTCTGAGGTTTGACTCTTCCGTAATCAGAGGCAAACGACGGTTTCGCTGAATCCAAAG
GAATAATCATGAAGAACCCAGTGTTCCGTCCTCCAAAGTACGCACCTTGTGCTTCCAAGGCCGTGCGCCCGAGCGGGGAC
ATCAAGGAAGAGAAGCTTTGCTAGGAGAGGAAGTCTCAAGTAACTAGCATCTGCGCATCATGTGAACTTGTAAACATGTA
CTTTCTCCATCCTAAAATAAGTGACTCAAAAGTGAGTCAACTTTGTATTAAAGTTAGTACAAAATTTAATTATTTTTGAG
TCATTTATTTTGGTACAAAGTTGACTCACTTTTGAGTCACTTATTTTGGGATGGAGGGAGTATGCCGGTTCTGAAATAAA
AGGAGGACGACCGAAGGCTACTAGTACATACGTCTATCTTTTTTACTTGGCTGCTGGCAGGCACCAGGGGTAGTATGCCG
ATGATTTCGGTATATTGCAACCAATCTGTCATATAAAAAGAAATTCGGCATATTACATGCAATGTTTTTCGTCGGCACCA
ATACAATCTTGAAACAGGTTTTCACCCCTTTTTAAAAGATAAAAACAACATGTCCACACAAATAGTCCAAGTACGAGTAA
ATGAAACAAAAATTGTTGGAGCAACAACACAATACATGGGACACGAAGAAGAAAAACAACAATACAATCTCACTATCAGA
GGCGTCGTGCACCCTTCTGAGAGGATATACAACCGCATCGTAAACATAGGGAGACCAGAGAGGCAAGAGTTGATGGGCAT
GGTCTTTATGTTTAGAGCAGCGATCTGCGCCGGCGCACTGGCTCAATCATTGGGCCGGTCAAGCCCCAGGCATCAGATCT
GGG---CCCCCGAGCCGTCAGATCCCTTCGTCTCCAACCTCTTTCATCTTCAACCTCCGGCACAAAAAA--A-GGAGAGG
CCCGCCTTCGCACGCGGCGACGCCTTCGC------------------ACGCGCCAACCGCCTCGCCTCGCCTCCTCACCG
CCGGTCGCC---CTCACCTCCGGTCGCTGCCCTCGCCGTTGGTCGCCGCCCTCACCTATGTCGCCTTCGTGTGTTTCTCA
CC-TTTGTGAATGCAGCAGCGTGCGCCCATGGTTGCACCCGTGGTTGCAGGCTTGCAGCTC-------------------
--CGAGGAAGATGGCCGCATCACCGGTGG-------CGCCGGCCGCAGGCCGCAGCGCCTGTCGTTGTGCTCGCGTTGTA
CCTCGCCGTGTGCCCAC-----TCGAGGCTCTTGCTGGTTCCAACAAAAAACGACACCGGTTGTAGCAAAAAAGTTTATC
GCTTCCAGCAAAAAAGCTTGCCGCTGCAGCTCGCTGTCGTCATTGTAGCAAAAATGTTAACCGGATGTAGCTTCTATGGT
TGCC-GATTGCAGCAAAAAAAA
>chr1B_1
GGGAGTCACGGCGCGCACGGACCAGCT-GTTGTCCTGCCGGCGTCCGACGAGTGTG--------TCGGCTTCCGACGAGT
GTGCTAGTGAGGATCTGGCCGGGCG------GCGAAGCGGCTTCTTGGTC-GGGGGTGGCTGTGTGGTGGG-GG---CGC
GGGAGCTAGGAAGCAGTCGGCTCCC-GGTGGCAAGATGGCGGTGGCGGGCGACGTGGGAGTGGGCGGCGTAGCTCGGCGG
ATGTGGAGGCCCCGGCAGCTGGCAGAGTCGCCAGC-AAAATGGGCGGCGGCGGAGGAGGAGGAGGAGGAGGGCG---AGA
GTTGCTGTTGGATGGGGGAGAGCAATGTGACACAGACCAACGGGCCC--GG-GGGAGGAGAAGGCGAGCGTGCG-----C
GCGTGCGTCGCGTGTCCGCGCCGACGCAAATCCGGCTCAAAAATTGTCCGGGAATGGGTCGCCCGCGGATGAAAAGCGGA
C--GGGCGTCCGTTTGGGTCGGCGCGTTGGGCTGCCTTTTCTGTCC--ACCGACCCAAACGGACGGCGGCGGACGAAATG
GGTCGCCCCATTGGAGTTGCTCTAAA---AT-------------------------------------------------
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----------------------
>chr1B_1
GGGAGTTGCGGCGCGCACGGACTAGCTAGCTGTCCTGCCGGCGTCCGACGAGCGTGCCAGCGTGTCGGCGTCCGATGAGC
GTGCCGGTGAGGATTTGGCCGGGCG------GCAAGGCGACTTCTTGGTC-GGGGGCGGCTGTGTGGTGGG-GGGGGCGC
GGAGGGTGGGAAGCAGTCGGCTCCC-GGCGGCAAGACGGCGATGGCGGGCGACGTGGGAGTGGGCGGCGTAGCTGGGCTG
ATGTGGAGGCCCCGGCAGCTGGCAGAGTCGCCGACAAAAATGGGCGGCGGCGGCGGCGACGGAGGAGGAGGGCG---AGG
GTTGCTGTTGGATGGGGGAGGGCAATGTGACACAGACCGGCGGGCCC--GA-GGGAGGAGAGGGTGAGCGTGCG-----C
-----CGTCGCGTGTCTGCGCCGACGCAAATCCGGCTCAAAAATGGGCCGGG--TGGGTCGCCCGCGGACGAAAAGCCGA
C--GCGCGTCTGAC----TCAGCACGTTGGACCGCCTTTTCTGTCCGCGCCGACCCAAACGGTCGGCGGCGGACGAAATG
GGTCGCCCCGTTGGAGTTGCTCTAA-------------------------------------------------------
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----------------------
>chr5B_1
GGGGGTCGCGGCGCGCACGGACCAGCT-GCTGTGCTGCCGGTGTCC-ACGAGCATG--------CCAGCTTCCGACGAGC
GTTCCGGTGAGGATCTGGCCGGGCA------GCAAGGCGACTTCTTGGTC-GGGGGCGGCTGTGTGGTGGG-GTGGG---
GGTGGGTGGGAAGCAGTCGGCTCCC-GGCAGCAAGACGGCGGTGGCGAGCGACGTGGGAGTGGGCGGTGTAGCTGGGCGG
ATGTGGAGGCCCCGGCAGCTGGCAAAGTCGCCGGCAAAAATGAGCGATGACGTCGGCAACGGAGGAGGAGGGCG---AGG
GTTGCTGTTGGATGGGGGAGGGCGGTGTGACACAGACCAGCGGGCCC--GG-GGGAGGAGAGGGCGAGCGTGCACGCGTC
-----CGTTGCGTGTCCGCGCCAACGCAAATCCGGCTCAAAAATGGGCCGGAAATGAGTCGCCCGCGGATGAAAGGCGGA
C--GCACGCCCGTTTGGGTCGGCGCGTTGGGCCGCCTTTTCTGTCCGCAGCGACACAAATAGACGGCGGCGGACGAAATG
GGTCGCCC-ATTGAAGTTG-------------------------------------------------------------
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>chr3B_1
GGGAGTCGCGGCACACACGGACCAGCTAGCTGTCCTGCTGGTGTCCGACAAGCGTGTC--------GGCTTTCGATGAGC
GTGCCGGTGAGGATCTGGACGGGCG------GTGAGGCGGCTTCTTGGTC-GGGGGCGGCTGTGTGGTGGG-GGG--CGC
-GGGGGTGGGTAGCAGACGGCTCCC-GGCGGCAAGACGGCGGTGGCGGGCGACGTGGGAGTGGGCGGTGTAGCTAGGCGG
ATGTGGAGGCCCCGGCAGCTGGCAGAGTCGCCAGCAAAAATGGGTGGCGGCATTGGCAACGGAGGAGGAGGGCGGCAAGG
GTTGCTGTTAGATGGGGGAGGGCAATGTGAAACAGACCAGCGGGCCC--GA-GGAAGGAGAGGGCGAGCATGCGCGCGTC
-----CGTCGCATGTCCGCGCCGACGCAAATCCGGCTCAAAAATGGGCCAGGAATGGGTCGCCGGCAGACGAAAAGTGGA
C--GTGCATCCGTTTGGGTCGGCGCGTTGGGCCGCCTTTTCTGTCCGCGCCGA-CCAAACGGACGTCGGCGGACAAAATG
GGTCGCCCCATTGAAGTTGCTCTAAC------------------------------------------------------
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----------------------
>chr2B_1
GGGAGTCGCGGCGCGCACGGACCAGCT-GTTGTCCTACCGGTGTCCGACAAGCTTGTC--------GGTTTCCGACGAGC
GTGCCGGTGAGGATCTGGCCGGGCG------GCGAGGCAGCTTCTTGGTC-GGGGGCGGTTGTGTGGTGGG-GG---CAC
GGGGGGCAGGAAGCATTCGGCTCCC-GGCGGCAAGACGGCGATGACGGGCGACGTGGGAGTGTGCGGCATAGCTGGGCGG
ATGTGGAGGCCCCGGCAGCTGGCAGAGTCGCGGGCTAAAAAGGGCGGCAGCGTCGGCGACGGAGGAGGAGGGCG---AGG
GTTACTGTTGGACGGGGGAGGACAATGTGACACAGACCAGCTGGCCT-GGG-GGGAGGAGAGGGCGAGCGTGCGCGCGTC
-----CGTCGCGTGTCCGCGCCGACGCAAATCCGGCTCAAAAATGGGCCGGGAATGGGTCGCCCGCGGACGAAAAGCGGA
C--GCGCGTTCGTTTGGGTCGGCGTGTTGGGCCGCTTTTTCTGTCCGCGCCGACCCAAACGGACGGCGGCGGAGGAAATG
GGTCGCCCCATTGGAGTTGCTCTAA-------------------------------------------------------
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----------------------
>chr2B_1
GGGAGTCGCGGCGCGCACGGACCAGAT-GCTGTCCTGCCGGCGTCCGACGAGCGTGCC--------GGCTTCCGACGAGC
GTGCCGGTGAGGATCTGGCCGGGCG------G-GAGGCGGCCTCTTGGTC-GGGGGCGGCTGTGTGGTGGG-GGGCAT--
GGGGGGTAGGAAGCAGTCGGCTCTC-CGCGGCAAGATGGCGGTGGCGGGCGACATGGGAGCGGACGGCGTAGCTGGGCGA
ATGTGGAGGCCCCGGCAGCTGGCAGAGTCGCCGGCAAAAATGGGCGGCGGCGTCGGGGCCGGAGGAGGAGGGCG---GGG
GTTGCTGTTGGATGGGGGAGGGCGATGTGACACAAACCAGCGGGCCCAGGG-GGGAGGAGAGGGCGAGCGTGCGCGCGTC
-----CGTCGCGTGTCCGCGCCGACGCAAACCCGGCTCAAAATTGGTCCGAGAATGGGTCGCCCGCGGACGAAAAGAGGA
C--GCGCGTCCATTTGGGTCGGCGCATTGGGCCGACTTTTCTGTCCGCGCTGACCCAAACGGACGCCCGCGGACGAAATG
GGTCGCCCCATTGGAGTTGCTCTTACAACATCTCTTCT------------------------------------------
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----------------------
>chrUn_1
GGGAGTCGCGGCGCGCACGGACCAGCTAGCTGTCCTGCCGGCGTCCGACGAGCGTGCC--------GGCTTCCGACGAGC
GTGCCGGTGAGGATCTGGCCGGGCGCGGGCGGCGAGGCGACTTCTTGGTC-AGGAGCGGCTGTGTGGTGGG-AGG-GCGC
GGGGGGTGGGAAGCAGTCGGCTCCC-GGCGGCAAGACAGCGGTGGCGGACGACGTGGGAGTGGGCGGCATAGCTTGGCGG
ATGTGGAGGCCCCTGCAGGTGGCAGAGTCGCCGGAAAAAATGGGCGGCGGCGTCGGCGACGGAGGAGAAGGGCG---AGG
GTTGCTGTTGTATGGGGGAGGGCATTGTGACACAGACCAGCGGGCCC--GG-GGGAGGAGAGGGCAAGCGCGCGCGCGTT
T-----GTCGCGTGTCCGCGCCGACGTAAATCCGGCTCAAAAATGGACCGGAAATGGGTCGCCCGCGGACGAAAAGCGAA
C--GCGCATCCGTTTGGGTCGGCGCGTTGGGCCGCCTTTTCTATCCGTGCCGATCCAAACGGACGGCGGCGGACAAAATA
GGTCGCCCCATTGGAGTTGCTCTTAT---ATC------------------------------------------------
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----------------------
>chr7D_1
GGGAGTCGCGGCGCGCACGGACCTGCTAGCTGCCCTGCCGGCGTCCGACGAGTGGGCC--------GGCGTCTGACGAGC
GTCCCGGTGAGGATCTGGCCGGG-----GCGGCGAGGCGGCTTCTTGGTCGGGGGGCGGCTGTGTGGT--G-GGGGGCGC
-GGGGGTGGGAAGCAGTCGGCTCCCTGGCGGCAAGACGGCGGTGGCGGGCGACATGGGAGTGGGCGGCGTTGCTAGGCGG
ATGTGGAGGCGCCGGCAGCTGGCAGAGTCGCCGGCAAAAATGGGCGGCGGCGACGGCGACGAAGGAGGCGGGCG---AGG
GTTGCTGTTGGATGGGGGAGGCCAATGTGCCACCGACCAGCGGGCCC--TG-GGGAGGAGAAGGCGAGCACGCGCGTGTC
-----CGTCGTGTGTTCGCGCCGACGCAAATCCGGCTGAAAAATGGGCCAGGAATGGGTCGCCCGCGGACGAAAAGCGGA
C--GCGCGTCCGTTTGGGTCGGCGCGTTGGGCCACCTTTTGTGTCCACACCGACCCAAACGGACGGCGGCTGACGAAATG
GGTCTCCCTATTTGAGTTGCTCTAA-------------------------------------------------------
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----------------------
>chr7D_1
GGGAGTCGCGGCGCGCACGGACCAGCTAGCTGCCCTGCCGGCGTCCGATGAGTGGGCC--------GGCGTCCGA-GAGC
GTGCCGGTGAGGATCTGGCCGGG-----GCGGCGAGGTGGCTTCTTGGTC-GGGGGCGGCTGTGTGGTGCG-GGGGGCGC
-GGGGGTGGGAAGCAGTCGGCTCCCCGGCGGCAAGACAGCGGTGGCGGGCAACGTGGGAGTGGGCAGCGTTGCTGGGCGG
ATGTGGAGGCGCCGGCAGCTGGCAGAGTCGCCGGCAAAAATGGGCGGCGGCTTCGGCGACGAAGGAGGTGGGCG---AGG
GTTGCTGTTGGACGGGGGAGGCCAATGTGCCACCGACCAGCGGAGCC--GG-GGGAGGAGAAGGCGAGCGTGCGCGCGTC
-----CGCCGCGTGTCCGCGCCGACGCAAATCCAGCTCAAAAATGGGTCGGGAATGGGTCGCCCGCGGATGAAAAGCGGA
C--GGGTGTCCGTTTGAGTCGGCGGGTTGAGCCGCCTTTTGTGTCCGCACCGACCCAAATGGACGGCGGCGGATGAAATG
GGTCGCCCCATTGGAGTTGCTCTTAAC-----------------------------------------------------
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>chr7B_1971
TTTTGTTTG-----------------------------------------------------------------------
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---------------GGCAGCGATCTGCGTCGGCGCACCGGCCCAATCGTTGTGCCGGTCAAGCCCCAGCCGTCAGATCT
-GG---CCCCCGAGCCGTCAGATCCCTTCGCCCCCAACCTCTCCCATCTTCAACCTCTCGCACGGAAAA--G-GGAGAGG
CCCGCCTCCACACGCGCCAACACCTCTGC------------------ACGCGCCAAC-----CGCCTCGCCTCCTCACCG
CTGGTCGCC---CTCACCGCCGGTCGCCGCCCTCACTGCTGGTCGCCGCCCTCACCTATGCCGCCTTCATGTGTCTCTCA
CC-TCCGTGGATGCAACAACGTGCGCCCATGGTTGCACTCGTGGTTGCAGGCTTGCAGCTC-------------------
--CGGGGAAGATGGCCGCATCTCCAATGG-------CGCCGACCGCCGACCGCAATACCTGCCGTTGTGCTCGCGCTGTA
CCTTGCTGTGTGCCCACCCGACCCGAGGCTCTTGCTGGTTCCAACAAAAAACGACACCAGTTGTAGCAAAAAAGTTTATC
GCTTCCAGCAAAAAAGCTTACCACTGCAGTCCGCCGTCATCATTATAGCAAAAATGTTAACCGGATGTAGCTTCTGTGGT
TGCC-GATTGCAGCAAAAAAA-
>chr6B_1973
TATTTTTTG-----------------------------------------------------------------------
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---------------GGCAACGATCTGCGCCGGCGCACCGGCCCAATCATTGGGCCGGTCAAGCCCCTGCCGTCAGATCT
-GGCCCCCCCCGAGCCGTCAGATCCCTTCGTCCCCAACCTCTTCCATCTTCAACCTCCCACACGGAAAA--AGGGAGAGG
CCCGCCTTCGCACGAAGCGACGCCTCCGC------------------ACGCGCCAACCGCCTCGCCTCGCCTCCTCACCG
CCGGTCGCC---CTCACTGCCGGTTGCCGCCCTCGTCGCTGGTTGCCGCCCTCACCTATGCTGCCTTCATGTGTTTCTCA
CC-TCCGCGGATGCAGCAGCGTGCGCCCATGGTTGCACTCGTGGTTGCAGGCTTGCAGCTC-------------------
--CAGGGAGGATGGCCGCATCTCCGGTGG-------CGCCGGCCGCCGGCCGCAGCACCTGTCGTTGTGCTCGCGCTGTA
CCTCGCCGTGTGCCCAC----CCCGGGGCTCTTGCTGGTTCCAACAAAAAACGACACCGGTTGTAGCAAAAAAGTTTATC
GCTTCCAGCAAAAAAGCTTACCGCTGCAGCCTGCCGTTGTCATTGTAGCAAAAATGTTAACCGGATGTAGCTTCTGTGGT
TGCC-GATTGCAGCAAAA----
>chr1D_1977
TTTA---TG-----------------------------------------------------------------------
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---------------GGCAGCGATCTGCGCCGGCGCACCGGCCTAATCGTTGGATCGGTCAAGCCCCAACCGTTAGATCT
-GGGCCT-CCCGAGCCGTCAGATCCCTTCGTCCCCAACCTCTTTCATCTTCAACCTCCTGCACGGAAAA--A-GGAGAGG
CCCGCCTTCGCACGCGCCGACGCCTTTGC------------------ACGCGCCAAC-----CGCCTCGCCTCCTCACCG
CCGGTCGCCGCCCTCGCCGCTGGTCGCCGCCCTCGCCGCTGGTCGCCGCCCTCACCTATGCCGCCTTCATGTGTTTCTCA
CC-TCCGTGGATGCAGCAGCATGCGCCCATGGTTGCACTCGTGGTTGCAGGCTTGCAGCTC-------------------
--CGGGGGAGATGGCCGCATCTCCGGTGG-------CGCCGGCCGC-------AGCACCTGTCGTTGTGCTCGCGCTGTA
CCTCGCCGTGTGCCC-----ACCCGAGGCTCTTGCTGGTTCCAACAAAAAACGACACCGGTTGTAGCAAAAAAGTTTATC
GCTTTCAGCAAAAAAGCTTACCGCTGCAGCCCGCCGTCGTCATTGTAGCAAAAATGTTAACCGGATGTAGCTTCTGTGGT
TGCC-GATTGCAGCAAAAAAA-
>chr5B_1980
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-------------AGGGCAACGATCTGCGCCGGCGCACCGGCCCAATCGTTGGGCCGGTCAAGCCCCTGCCGTCAGATCT
-GGCCCC-CCCGAGCCGTCAGATCCCTTCGTCCCCAACCTCTTCCATCTTCAACCTCCCGCACGGAAAA--AGGGAGAGG
CCCGCCTTCGCACGAAGCGACGCCTCCGC------------------ACGCGCCAACCGCCTCGCCTCGCCTCCTCACCG
CCGGTCGCC---CTCACCGCCGATTGCCGCCCTCGCCGCTGGTTGCCGCCCTCACCTATGCTGCCTTCATGTGTTTCTCA
CC-TCCGCGGATGCAGCAGCGTGCGCCCATGGTTGCACTCGTGGTTGCAGGCTTGCAGCTC-------------------
--CAGGGAGGATGGCCGCACCTCCGGTGG-------CGCCGGCCGCCGGCCGCAGCACCTGTCGTTGTGCTCGCGCTGTA
CCTCGCCGTGTGCCCAC----CCCGGGGCTCTTGCTGGTTCCAACAAAAAACGACACCGGTTGTAGCAAAAAAGTTTATC
GCTTCCAGCAAAAAGGCTTACCGCTGCAGCCTGCCGTCGTCATTGTAGCAAAAATGTTAACCGGATGTAGCTTCTGTGGT
TGCC-GATTGCAGCAAAA----
>chr1D_1983
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----------------GCAGCGATCTGCGCCGGCGCACCGGCCCAATCGTTGGATAGTTCAAGCCCCAGCCGTCAGATCT
-GGGCCC-CCCGAGTCGTCAGATCCCTTTGTCCCCAACCTCCCCCATCTTCAACCTCCCGCACAGGA-AAAAGGGAGAGG
CCCGCCTTCGCACGCGCTGACGCCTCCGC------------------ACGGCGCCGACGCCTCGCCTCGCCTCCTCACCG
CCAGCCGCC---CTCACCGCCGGTCGCCGCCCTCGCCGCTGGTCGCCGCCCTCACCTATGCCGCCTTCATGCGTTTCTCA
CC-TCCGTGGATGCAGCAGCGTGTGCCCATGGTTGCACTCGTGGGTGCAAGCTTGCAGCTC-------------------
--CGGGGGAGATGGCCGCATCTCCGGTGACACCGGCCGCCGGCCAC-------AGCACCTGTCGTTGTGCTCGCGCTATA
CCTTGCCGTGTGCCCAC-----CCGAGGCTCTTGCTGGTTCTAATG-AAAACGACACCGGTTGTAGCAAAAAAGTTTATT
GCTTCCAGCAAAAAAGCTTACCGCTGCAGCCCGCCGTCGTCATTGTAGCAAAAATGTTAATCGGATGTAGCTTCTGTGGT
TGCCCGATTGCAGCAAAAAAA-
>chr3B_1983
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----------------GCAGCGATCTGTGCCGGCGCACCGGCCGAATCGTTGGGCCGGTCAAGCCCTAGCCGTTAGATCT
-GGGGCC-CCCGAACCGTCATATCCCTTCGTCCCCATCTTCTCCCATCTTCAACCTCCCGCACAG---AAAAGGGATAGG
CCCTCCTTCGCACGCGGCGACGCCTCCAC------------------ACGCGCCAACCGCCTCGCCTCGCCTCCTCACCG
CCGGTCGCTGCCC-CACCGCTGGTCGCTGCCCTCGCCGCTGGTCGCCGTCCTCACCTATGCCGCCTTCATGCGTTTCTCA
CCCTCCGTGGATGCATCAGCGTGCGCCCATGGTTGCACTCGTGGTTGCAGGCTTGCAGCTC-------------------
--CGGGGGAGATGGCCTCATCTCCGGTGG-------CGCCGGCCACCGACTGCAGCACCTGTCGTTGTGCTCGCGCTGTA
CCTCGTCGTGTGCCCACCTGAGGCTCAA-TCTTGATGGTTCCAACAAAAAACGACACCGGTTTTAGCAAAAAAGTTTATC
GCTTCAAGCAAAAAAGCTAT-CGCTACAGCCCGCCGTCGTCATTGTAGCAAAAATGTTAACCGGATGTAGCTTCTGTGGT
TGCC-GATTGCAGCAAAAAAA-
>chr5D_1983
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----------------GCAGCGATCTGCGCCGGCGCACCAGCCCAATCGTTGGGCCGGTCAAGCCCCAGCCGTCAGATCT
-GGGCCC-CCCGAGCCGTCAGATCCCTTTGTCCCCAACGTCTCCCATCTTCAACCTCCCGCACGGAAAAAAAGGGAGAGG
CCCGCCTTTGCACGCGCCGACGCCTCCGC------------------ACGCGCCAACTGCCTCCCCTCGCCTCCTCACCG
CTGGTCGGC---CCTC-------------------CCGCTGGTCGCCGCCCTCACCTATGTCGCCTTCATGCGTTTCTCA
CC-TCCATGGATGCAGCAGCGTGCGCCCATGGTTGCACTCGTGGGTGCAGGCTTGCAGCTC-------------------
--CAGGGGAGATGGCCGCATCTTCGGTAG-------CGCCGGCCGCCGGCCGCAGCACCTGTCGTTGTGCTCGCGCTGTA
CCTCA-CGTGTGCCC-----ACCCGAGGCTCTTGCTGGTTCCAACAAAAAACGACACTGGTTGTAGCAAAAAAGTTTATC
GCTTCCAGCAAAAAAGCTTACCGCTGCAGCCCGCCGTCGTCATTGTAGCAAAAATGTTAACCAGATGTAGCTTCTGTGGT
TGCC-GATTGCAGCAAAAAAA-
>chr3A_1983
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----------------GCAGCGATCTGTGCTGGCGCACCGGCCCAATCGTTGGGCCGGTCAAGCCCCAACCGTCAGATCT
-GGG-CC-CCCGAGCCGTCAGATCCCTTCGTCCCTAACCTCTCCCATCTTCAACCTCTCGTACGG---AAAAGGGAGAGG
CCCGCCTTCGCACGCGCCGACGCTTCCGCACGCGCTGACGCCTCCGCACGCGCCAACTGCCTCGCCTTGCCTCCTCACCG
CCGGTCGCTGCCC-----------------------------TCGCTGCCCTCACCTATGCCGCCTTCATGCGTGTCTCA
CC-TCCGTGTATGCAGCAGCGTGCGCCCATGGTTGCACTCATGGTTGCGGGCTTGCAGCTCCGGGGAAGATGGCCACAGC
TTCGGGGGAGATGGCCGCATCTCCGGTGG-------CGCCGGCCGCCGGCCGCAGCACCTGTCGTTGTGCTAGCGCTGTA
CCTCGCCGTGTGCTC-----ACCCGAGGCTCTTGCTGGTTCCAACAAAAAACGACACCGGTTGTAGTGAAAAAGTTTGTC
GCTACCAGCAAAAAAGCTAACCGCTGCAGCCCACCGTCGTCATTGTAGCAAAAATGTTAACCGGATGTAGCTTCCGTGGT
TGCT-GATTGCAGCAAAAGAA-
>chr4D_2027
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------------------------------------------------------------AAGCCCCAGCTGTCAGATCT
GGGG-CC-CCCGAGCCGTCAGATCCCTTCGTCCCCAACCTCTCCCATCTTCAACC---CGCACGG---AAAAGGGAGAGG
CCCACCTTCGCACGCGCCGACGCCTCCGC------------------ACGCGCCAACTGCCTTGCCTTGCCTCCTCACCA
CCGGTCGCC---CTC-------------------GCCGCTGGTCGCCGCCCTCACCTATGCCGCCTTCATGCGTTTCTCA
CC-TCCGTGGATGCAGCAACGTGCGCCCATGGTTGCACTCGTGGTTGGAGGCTTGCAGCTC-------------------
--CGGGGGAGATGACCGCATCTCCGGTGG-------CGCCAGCCGCAGGCCGCAGCACCTATCGTTGTGCTCGCGCTGTA
CCTTGCCGTGTGCCC-----ACCCGAGGCTCTTGCTGGTTCCAACAAAAAACGACACCGGTTGTAGCATAAAAGTTTATC
GCTTCCAGCAAGAAAGCTAACCGCTGCAGCCCGCCGTCGTTCGTGTAGAAAAAATGTTAACTGGATGTAGCTTCTGTGGT
TGCC-GATTGCAGCAAAAAA--
>SNPs
-------------S----S-------------------------------------------------------------
----S-----------S-----------------------------------S------------------S--------
------------------------S-----------------------------------------------S--S----
------------------------------------------------------------------S-------------
--S-S-------------------------SS-------------------S----------------------------
----S----------------S---S-----------S------------S-------------S---------------
-SS--------------------S-----------------------------------S---S---S------------
---S----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS--S----------------------S---S--------------------------S-S--------
--------------------------------S-------------------------S-----S---------------
--------------------------------------------------------------------------------
------------------S-------------------S-----------------------------S-----------
----SS---S----------------------------S-----------------------------------------
----S----------------S----------------------------------S------------------S----
----------------------S---------------------------------------------------------
-------------------S----------S---S----------------------------------------S----
---------------------S
>forward_747
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-------TTGGCACGCGCGAAAATAAA-----------------------------------------------------
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----------------------
>reverse_1979
--------------------------------------------------------------------------------
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----------------------------------------------------------AGAGGCAAGAGTTGATGGGC--
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----------------------
