>input_sequence_75731
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-----------------------------------------------------ATGGCGACGCAGCAGATCGTCCTCCTC
CTCTTACTCCTCGCGGCACCTCATGGCCTCGCCGTGGCCGTCAGCCCTACACCCATCATCAACACCACATGCGCTGCGCT
CGCCCACAGCCCCAACTTCACATTGCACGTCGAGTACGAATTCTGCGTGCGCTCGCTTTCAGCCGACCCGGTGGCCTCTT
CCGCCACGGACGC-----------------CCGCGGGCTAGCGGCGGCCGCGGCAAGCCTTACCGTTGCCAACATAACGT
CCACGGAGCTCATCATTGCCGACCTCGTCAAAAATCTGGTCAGTTGTCTCTCCGACTACAAAGAGCTTAACGACATGGTG
CGGCGCGGGCTCCACGACATCCGCGGCGGGCGCGCCGCCAATGCTTCCAAGAAGTTTTTAGATGCGGCAGAGTCTGACGT
TCCGTCTTTGTGCGACCTCATCTTGATAGAGGGAGTCGCCAAGAGGAACCCCATAGATCAGGAGAACCAGAACGCCTACT
TCTTGTCCGTCATGGCCTCCGATATTACTCAGCTGATGCTGGATTCTCATGCAGGATCACCAAAAGAT------------
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--------------------------------------------------------------CCTAGCTGA---------
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>chr6A_1_TraesCS6A01G241600
AGATAGTAAGTCTCAATTGATAGGGTGTGGATGGTGTTTCAAACCCCAACCTCTAATACATGCAGCGCGAGGCGAACCAT
CAGGCCTAGCGCCTACAATTGTTTATTATAGATGTGCATGCTGTATTATATTGTATGATAAAGATGTTATATTTTTTTAT
GGATTAGGGCGTCTTTAAGACGGACTCGTAAACTTCTCGCAACCGTCCGGGCTTTAGAAGCCATTCAATGCCGATTAATA
TCGGTGCGTAGGATGATCCGGACACAATTTCTCTCATATATCAGAGACAAAAGTAACGGAGATTTGTCGGAGTCCAGACC
TGTCGGTGTACTGAGATTTGGGCCCAAACTTATGCACGGGCAAAAACTGCCGCTCTGCATGGCCTTTTGGAGCTAAGTAA
ATGCTACAGCCTACAGGGGACCGGTGTGTGTGGAGATGGACTGCTCCTCCATCCCTACTCTTTTGAATAACAAAGCCAAA
AGCCAATCAGTACTGTTCCCTCTTGTCACTGATTTTTGGGACCTTATGAAACAGTTCAAGGAGGTCACCATCAAAGCAGT
TAGAAGAACCAGCAACAGAATGGCTCACGAATTGGCCGCGTTTGCCAGAATTCATGGAGATCACAAAGCCTTTGGAGATG
TACCTTTAGCCCTAAGAGAAACCCTGAGGGATGACTGTAACACTTGGTCATTGGGAATTTAATTGAAGGCATGACCTTTT
CTAAAAAAAATGATGGGTACGTTCATGCTTCGACCATCACAAAACTGTGTTTCCAAATACAGCAATATTTGCTTCCCTTG
GAAGCACACTTTGAAACATGCGTGATAATAAAAAACGT-----AAAAGTTAATGCGCCTTAATTAGCCGGACAGCTAAGA
CGGACGCGCCTTCTATGAACCTGGACGGAGGGTGTGTTCGTCGTCTCGTTGACTTGTT--------CCATTGGTAGGGAT
ACCTTCTGACTACCATAAATACGGTAGCACAAAGACGTACTGTCTTCATAGCGATGGCGACGCAGCAGATCGTCCTCCTC
CTCTTACTCCTCGCGGCACCTCATGGCCTCGCCGTGGCCGTCAGCCCTACACCCATCATCAACACCACATGCGCTGCGCT
CGCCCACAGCCCCAACTTCACATTGCACGTCGAGTACGAATTCTGCGTGCGCTCGCTTTCAGCCGACCCGGTGGCCTCTT
CCGCCACGGACGC-----------------CCGCGGGCTAGCGGCGGCCGCGGCAAGCCTTACCGTTGCCAACATAACGT
CCACGGAGCTCATCATTGCCGACCTCGTCAAAAATCTGGTCAGTTGTCTCTCCGACTACAAAGAGCTTAACGACATGGTG
CGGCGCGGGCTCCACGACATCCGCGGCGGGCGCGCCGCCAATGCTTCCAAGAAGTTTTTAGATGCGGCAGAGTCTGACGT
TCCGTCTTTGTGCGACCTCATCTTGATAGAGGGAGTCGCCAAGAGGAACCCCATAGATCAGGAGAACCAGAACGCCTACT
TCTTGTCCGTCATGGCCTCCGATATTACTCAGCTGATGCTGGATTCTCATGCAGGATCACCAAAAGAT------------
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--------------------------------------------------------------CCTAGCTGAATAC-----
--ATGATGGCTCTTGTCTTCTTCCAGTTTTACTGATTTACTTGGCCATGGTGGCGTTGCCGTGCATGTTTTGTTTTATGT
GACTTGCTCATATATTTGTTGGTAATAG--------AAAAAGATAATTTTGAAAAGAAAAAAAAAAGCTAAAATGCGAAG
GATCCGGATGCCGTCGGATATGAATTGCGCGCGGCCGAGCGGCTCGCGTTCCGCTTCCGCCGGACAAATTTTGTCACCAC
GGTCGTTTCTCCTCTTGTGCCTCTTATTTTAGGCAGTAAGAACATCTACAACCGGACCATTTAAACCCGTTTCAAATATC
CGGTCAATGTCTG-GTCATGATTTTTTGACCTAGACTGGCCTCTCAAACAGTCCTCAAACGACCGTGGTGGCGCCCGGGC
ACGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCATTTGCTCTCTCCTATGTTCTTTCTCCTCTGCG
TCGTCCGGCTTGCAGCTCCGCCGCCGCGCCCGCTCCCCAGCCGTTTCCAGGCTCTCCGCCGCCAGCACCGGAAAAGCGCT
CCCGTCCTCGCCGCGGGGGACGTTGTCGTCGGCTCGGACGCCACCATGGTACATCCGGCAACTCTTCGGCTCCGCCTTAC
GCTTGATGTGTTCGACACATGACCGACCAGAATTATTGTGATTTTGTTAGGTAAATGATGGATTCCGATGCTTCATCGGA
CGACGAGTATGGAACAACGGAGCTTGACCAAATGATTCAAAAAGAGT
>chr6B_826
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-------------------------TAATAAAAAACGT-----AA--GTTAATGTGCCTTAATTAGGCAGACAGCTCAGA
CGGACGCGCCTGCTATGAACCTGGACGGATGGTGTGTTTGTCGTCTCGTTGACTCGTT--------CCATTGGGAGGGAT
CCCTTCTGATTACCATAAATACGGCAGCACAAAGACGTACTGTCTTCATAGCGATGGCAACGCAGCAGATCGCCCTCCTC
CTCTTACTCCTCGCCGCCCCTCATGGCCACGCCGTGGCCGTCAGCCCTACAGCCATCATCAACACCACATGCGCTGCGCT
CGCCCACAGCTCCAACTTCACATTGCACGTCGAGTACGAATTCTGCGTGCGCTCGCTCTCAGCCGATCCGGTGGCCTCTT
TCGCCACGGACGCCCGCGGGCTAGCGGCGGCCGCGGGCTAGCGGCGGCCGCGGCAAGCCTTACCGTCGCCAACATAACGT
CCACGGAGCTCATCATCGCCGACCTCGTCAAAAATCTGGGCAGTTGTCTCTCCGACTACAAAGAGATTAAGGACATGGTG
CGGCGTGGGCTCGACGACATCCGCGGCGGGCGCGCCGCCGATGCTTCCAAGAAATTTTTAGATGCGGCAGAGGCTGACGT
TCCGTCTCTGTGCGACCTCATCTTGATAGAGGGAGTCGCCAAGAGGAACCCCATAGATCAGGAGAACCAGAACGCCTACT
TCTTGTCCGTCATGGCCTCCGATATTACCCAGCTGATGCTGGATTCTCATGCATGATCACCAAAAGAT------------
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--------------------------------------------------------------CCTAGCTGAATAC-----
--ATAATGGCTCTTGTCTTCTTCCAGTTTTAGTGATTTACTAGGCCATGATGGCGTTGCCGTGCATG-TTTGTTTTACGT
GACTTGCTCGTATATTTGTTG-----------------------------------------------------------
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>chr6B_830
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-----------------------------AAAAAACGTACAAAAA--GTTAATGCGACTTAATTAGCCGGACAACTAAGA
CGGACGCGCTTTCTGCGAACCTGGACGGATGGTGTGTTCATCGT--------CTCGTT--------CCATCAGGAGGGAT
CCCTTCTGACTACCATAAATACGGCAGCACAAAGGCGTACGGTCTTCAAAGCCATGGCGACGCAGCAGATCGCCCTCCTT
CTCTTACTCCTCGCCGCCGCCCATGGCCTCTCCGTGGCCATCAGCCCTACACCCATCATCAACACCACATGCGCTGCGCT
CGCTCACAGCCCCAATGTCACAGTGCACGTCGACTACGAATTCTGCGTCCGCGCGCTTTCAGCCGACACGGCGTCCTCGT
CTGCCACGGACGC-----------------CCGCGGGCTAGCGGCGGCCGCGGCAAGCCTTACTGTCGCCAACCTAACAT
CCACCGAGCACATCATCGCGGACCTCGTCGATAATCTGGGCCGTTGTCTCACCGACTACAGAGAGATTAACGGCATGGTG
CGGCATGCGCTCGACGACATCCGAGGCGGGCGCGCCGCCGACGCTTCCGTGAAGCTTTTGGAAGTGGCAAAGGCAAACGC
TCCTGCTTGGTGCGACCTCATCTTGATAGAGGGAGACGCCAAGAGGAACCCCATAGATCAGGAGAACCATAACGCTGACT
TCTTGTCCGTCATTGCCTCCGGAATTGCCGAGCTGATGCTGCATTCTCATGGATGATCACCAAAAGAT------------
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--------------------------------------------------------------CCGAGCTGAATAC-----
--A---TGGCTCTTATCTTCTTCCAGTTTTAATCATTTA-----------------------------------------
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>chr6A_843
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-----------------------------------------------GTTAATGCGACATAATTAGCCGGACATCTAAGA
CGGACGCGCTTTCTGCGAACCTGGACGGATGGTGTGTTCATCGT--------CTCGTT--------CCATCAGGAGGGTT
CCTTTCTGACTAAAATAAATACGGCAGCACAAAGGCGTACGGTCTTCAAAGCCATGGCGACGCAGCAGATCGCCCTCCTT
CTCTTACTCCTCGCCGCCGCCCATGGCCTCTCCGTGGCCGTCAGCCCTACACCCATCATCAACACCACATGCGCTGCGCT
CGCCCACAGCCCCAATGTCACAGTGCACGTCGACTACGAATTCTGCGTCCGCGCGCTTTCAGTCGACCCGGCGTCCTCGT
CTGCCACGGACGC-----------------CCGCGGGCTAGCGGCGGCCGCGGCAAGCCTTACAGTCGCCAACCTAACGT
CCACGGAGCACATCATCGCGGACCTCGTCCATAATCTGGGCCGTTGTCTTACCGACTACAGAGAGATTAACGGCATGGTG
CGGCACGCGCTCGACGACATCCGAGGCGGGCGCGGCGCCGACGCTTCCGAGAAGCTTTTGCAAGTGGCAAAGGCAAACGC
TCCTGCTTGGTGCGACCTCATCTTGATAGAGGGAGACGCCAAGAGGAACCCCATAGATCAGGAGAACCATAACGCTGACT
TCTTGTCCGTCATTGCCTCCGGAATTGCCGAGCTGATGCTGCATTCTCATGGATGATCACCAAAAGAT------------
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--------------------------------------------------------------CCGAGCTGAATAC-----
--A---TGGCTCTTGTCTTCTTCCAGTTTTAATCATTTA-----------------------------------------
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>chr6D_891
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---------------TGAACCTGGACAGATTGTGTGTTCGTCGT--------CTCGTTGACTCGTTCCATTGGGAGGGAT
CCCTTCTAACTACCATAAATACGGCAGCACAAAGACGTATTGTCTTGATAGCGATGGCGACGTAGCAGATCGTCCTCCTC
CTCTTACTCCTCGCCGCCCCTCATGGCCTCGCCGTGGCCGTCAGCCCTACACCCATCATCAACACCACATGCGCTGCACT
CGCCCACAACCCCAACTTCACATTGCACGTCGAGTACGAATTCTGCGTGCGCTCGCTTTCAGCCGACCCGATGGTCTCTT
CCGCCACGGACGC-----------------CCGCGGGCTAGCGGCGGCCGCGGCAAGCCTTACCGTCGCCAACATAACGT
CCACGGAGCTCATCATCGCCGACCTCGTCAAAAATCTGGGCAGTTGTCTCTCCGACTACAAAGAGATTAAGGACATGGTG
CAGCGTGGGCTCGACGACATCCGCGGCGGGCGCGCCGCCGATGCTTCCAAGAAGTTTTTAGATGCGGCAGAGTCTGACGT
TCCGTCTTTGTGCGACCTCATCTTGATAGAGGGAGTCGCCAAGAGGAACCCCATAGATAAGGAGAACCAGAACGCCTACT
TCTTGTCCGTCATGGCCTCCGATATTACCCAGCTGATGCTGGATTCTCATGCATGATCACCAAAAGATTCTAGAGGCGTG
TTTGGTTGCTTTCGCTACCGGGCTGGCTCAGAGGGGAAAAATGAGTTAGGCTGAGCAGGGCGTGGGTAAGCAAAAACAGG
GTCAAAAATATAGATGACCGGTTGATTGGTTGCCTGCATTGGGGTCTTGTCATCGAAATGTAATTTTCATCCGGCGTTTG
GTTGCATACATGCATATGATTACCAGCGTTAACAACAAAAATTAATGGCCATCAGGTTGGGCTTGACATTTTGTCAAATA
CTTTGAGCGCGCCGGAGCTTCCATTGCCCATCGTGCCCACCACCAGCTCCCGTCGATCGTGGACGCGCCCGACTCGCTGT
CGTGGCCGTTGCCGTGCCCGGCTCGATGCTGTGGCCGTGGCCGCGCCCGGCTCGCCGCGGTCGTGGACGAGCTTGAGCTG
ACTCAGGCGGAATCAAACACGCCTTCCGCTTGTATGCGGGCAACCATACAAAGTTAGCTCAGAATCAATCCAACCGGAAC
ACCGAAGACCAACGATGGATGTCGCCGTGGTGAAGCAACTCAGGCGGATCCGCATGCTGGGCCGCGGCGCGTATGGCACT
GTTGTTTGGCTCACGTCCGACGAGGCCTTCGGGAAGCTCCTGTCCGTCAAGTCCGCCGGTGGCGCAGCGCAGCTGGAGTG
TGATGGCAGCGTGCTCAGCGGGCTTTGCTCGCCGCACATCATCCCCTGCCTTTGCTCCCGCGCCGCGGAGAGCGGCAAGT
ACCAGCTCTTCCTCAAGGTCGCGCCCGGCGGCTCGCTCGCCGACGAGGCCGTCAGGAACGGAGGCTGCCTCCCGGAGTCC
GCCATCCGGGCCTACGCCGGGGATGTGGCCAGGAGGCTGGAGTGCAGCGAGTACCAGCTCTTCCTCGACGGTCGCGCCAG
GCTGACGGACTTCGGCTGCGCGAGGGCCGTGGACTCCCTGCTCCCGATGGGCGGCACGCCGGCGTTCATGGTGCCGGAGG
TCGTGCGCGGCGAGGAGCAGGGGCCGGCGTCCGACATCTGGCTCTCGGCTGCACCTGTCATCGCCGTCGCCGCGGGCGCC
GATGGACGGGATCGCAGTGGAGTAGAGGGAGAGAGAGGGAATTGAGGATTAGGGAGAGAGAGGGGGATTAACTTGAGACA
CACATCTCCAGAGAGCCACCCACGTGCGCCTCGAAGCATCGCTCGGGCCTGACTCTCGGAAAACTGCCGATTCGGCCGTT
CCCAATGGGCCAGGCCCAGGGGTGCTTTAAGAACCGTGCTATGCGGGCTCAATAGTGTATGCGGGGAACCAATCAACTGA
GGTCCGAAAAGATGCTGCACCACACGAGCCTGGTTGGGCTCGATGCAGGCAACCAAACTCGCCCTAGCTGAATA----CA
TCA---TGACTCTTGTCTTCTTCCAGTTTTAGTGATTTACTTGGCCATGATCGCGTTGCTGTGCCTG-TTTGTTTTATGT
GACTTGCTCATATATTTGTTGGTCATAG--------AAGAAGATGGTTTTGAAAAGAAAAAAAAAGGCTAAAATCCGAAG
GATCCGGATGCCGTCGGATGTGAATTGCGCGCG-CCGAGCGGCTCGCGTTCCGCTTCCGCCGGATAGATTTTTTTCACCA
GGTCATTTCTCCTCTTGTGCCTCTTATTTTAGGCAGTAAGAGCATCTAAAACCAAACCTCTCTAACCTGTCTTAAACGCC
CGGGCAGTCGTCCAGTCACGATTTTTTGACCTAGACGGGCCTCTCAAA--------------------------------
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>chr6D_1170
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--------------------------------------------------------------CCGACCCGGCGGCCTCGT
CCGCCCCGGACGC-----------------CCGCGGGCTAGCGGCGGCCGCGGCGAGCCTCGCCGTCGCCAACATGACGT
CCACGGAGCACATCATCGCCGACCTCGTCCGAAACCTGGGCAGCTGTCTCGCCTACTACAAGGAGATCAACGGCATGGTG
CGGCGCGGGCTCGACGACCTCCGCGCCGGCCGCGCCGCCGACGCTTCCGAGAAGCTTTTGGAAGCGGCAGAGTCAGACGC
TCCGTCCTTGTGCGACCTCATCTTGATAGAGGGAGACGCCAAGAGGAACCCCATAGATCGGGAGAACCAGAACGCCTACT
TGTTGTCCGTCATGGCCTCCGATATCGCCCAGCTGATGGTGGATTCTCATGCATCATCACCAAAAGAT------------
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--------------------------------------------------------------CCTAGCTGAATACGTACA
TCA---TGGCTCTTGTCTTCTTCCAGTTTTAGTAATTTACTAGACAATGATGGCGTTGCCGTGCCTG-TTTGTTTTATGT
GACTTGCTCATATATTTGTTGGTAATAGTCTAATAGAAGAAGATAATTTTGAAAAGAACAAAAA----------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS--------------------SS---------------------------------
-----------------------------S------------------------S------------------S------
S-----------------------S-------------------------------------------------------
--------------S--S--------------------------------------------------------------
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------------------------------------------------------------------S-------------
----------------S----------------------S-------------------------S--------------
------------S--------------------------S----------------------------------------
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----------------------------S------------------------S--------------------------
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----S--------------------------S-----------------S-----------------S------------
--------------------------------------S--------------------------S--------S-----
-------------------S-------------S------------------------------S-S-----S-SSS-SS
----S------------------------------------S------S----SS---SS-SS----S--S-S---SSS-
---S--S-SSSSS-----S-----------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_420
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ATGCTACAGCCTACAGGGGA------------------------------------------------------------
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>reverse_3804
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-------------------------------------------CCATGGTACATCCGGCAACT-----------------
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