>input_sequence_75719
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------------------------------------------------ATGGAGGAGGAGCGGGAGGAGGCGGGCGTGGC
GCTGACGGGGAGGCGGGCGCGGGCGGACACGAGGCACCCGGTGTACCGGGGCATCCGGCTCAGGGGCGGCAAGTGGGTGT
CGGAGATCCGGGAGCCGGGCAAGGCCAGCAGGATCTGGCTGGGCACGTACCGGACGCCCGAGATGGCCGCCGCCGCGTAC
GACGCCGCCGCATTGGCGCTGCGGGGGGCCCGGGCCGCCGGCCCCGCGCTCAACTTCCCCGGCGAGGCGCTGTCGCGGCC
CGCGCCGGCGTCGTGCGCGCCGGACGACATACGGGCGGCCGCGGCCGCAGCCGCGGCGATGGTTGTCGATGCCGGCAGCT
CTCCTCGGACGGAGGCTGATGGCGGCCGCTCCGGGTCCGGGAGCTGCGGCGCGGGTGAACAGGGCCCCGTCGTGGACGAG
GACGACGTCTTCGAGATGCCGCGGCTGCTGGCGAGCATGGCGGAGGGGCTGATGATGAGCCCGCCGAGGCTGGGCGCGGC
GACGGCGGTGGACGACGACCACGATGGCGGCATGAGCTTGTGGGAACACTCTTGA-------------------------
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>chr4B_1_TraesCS4B01G354400
GAAGCTTGCTCCCTCTTATCAAGCTCGGATACGGATCGTTCGGTTTATTCCTCTATTGTTAGAGAGATTAAGCACCTCAT
GGGTTTAAGAAAAACTTGTATTTCTCATATAGTTAGATCTCAAAATAAAGCTAGTGATTGCTTAGCTAAGTTTGCTAGAA
TCGAAGGCAGGACCATGACTTGGTTAGGAGCTGGTCCAGTTGAAGTATTGGAAATAGCAGCGTCTGATTGTAATGACATT
GTGATTGAGTAATGAAATGCTATTTCTCCCGTAAAAAAAGAATTGTGAGTAGAAAAAGGGTGAATAATAACTTTTGTATA
GTTTGGATTTTGTTTTTGACTTTTTGTTGTCGTCCAAAATACCATGGAAGTCATTCGTTCGCTAAACTTTTCACACACCT
GCTCATGCTTGATTAGAAAGGAAAATTAAAATTTAAAAATTATCATTATTCAATTTGGGTGCATCGGCAGCAAGACCCAA
AGATTCACGTCTGTATGTATATGTACTATCTTCTCCCCCTTGACCCCTTTCAATCTTCCCCGTGGTGGATTATGATCATG
CATGGTACTGTCGTCGGTCGGGGCCCCGGTAGAACGAGTCAACCTGACAGCGATCCTCCGACCCAGTAAAACTATCCCGA
GTCAACCAGAGTGACACTGACGGATCAACACGTGTGCTCACCGGCTATTCTCAACAGACCTGTAAAGGCGACGCACTAAT
GGCGTTCTTAACAACCTAGGACGGCCCCGACGTGGCGGCTCGCCGTTCGACCACCGGCGAACAAAGATCATCTGAACTTT
TGGCTCTCTCGTGCTCCCCAGCTAAGC-----TAATCCCTAGCCAAGGAAGCAACCCGGAGAGAGAGACGCGTCCCAGAA
ATTCTTTCCAGTTTCTCGCCGCCATTGGCATGCACCACCGGCCTCCCCTGTGCTTTTAAACCCTCGCCGTGATCCGACTA
GCATCATCACACGACACAATTAC---GCCATTGTTGTGTGCGGAGCGGATGGAGGAGGAGCGGGAGGAGGCGGGCGTGGC
GCTGACGGGGAGGCGGGCGCGGGCGGACACGAGGCACCCGGTGTACCGGGGCATCCGGCTCAGGGGCGGCAAGTGGGTGT
CGGAGATCCGGGAGCCGGGCAAGGCCAGCAGGATCTGGCTGGGCACGTACCGGACGCCCGAGATGGCCGCCGCCGCGTAC
GACGCCGCCGCATTGGCGCTGCGGGGGGCCCGGGCCGCCGGCCCCGCGCTCAACTTCCCCGGCGAGGCGCTGTCGCGGCC
CGCGCCGGCGTCGTGCGCGCCGGACGACATACGGGCGGCCGCGGCCGCAGCCGCGGCGATGGTTGTCGATGCCGGCAGCT
CTCCTCGGACGGAGGCTGATGGCGGCCGCTCCGGGTCCGGGAGCTGCGGCGCGGGTGAACAGGGCCCCGTCGTGGACGAG
GACGACGTCTTCGAGATGCCGCGGCTGCTGGCGAGCATGGCGGAGGGGCTGATGATGAGCCCGCCGAGGCTGGGCGCGGC
GACGGCGGTGGACGACGACCACGATGGCGGCATGAGCTTGTGGGAACACTCTTGAGTTTCTCTTCTTTCTCCTGTGGGTG
TAGCTGGTCTGTTGCACTTGCACTAGTACGAAACTTGAACGAGCAGACACAGCACACAAGTAC--AGAGCTGCGCGAACT
TTGCGGCTCCCCTTATCGATACGTGGCAAGTTGATCTCGTCATATTGGTTATCCGTCCAGTCAA----------------
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------------------------------------------------------------------------AGATAAAA
TATCATCAGTGAGAAATACTCCCTCCGTCTCAAAATTCATGTCTTCGATTTGTTTAGATACAGATGTATCAAGTCACGTT
TTAATATTAGGTATATCTGTATCTAGACAAATGTAAGACAAATTTTTTGGGACGGAGGGAGTATATAAACAAACTACCAA
GGGAAAGCACAAAGCGT---------------------------------------------------------------
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------------TTGGTTTGTTAACTTTTCACCATCTCTCTAGATTACAACCTTGTCCAAAAATGAAAAGATTACAGCCT
GCTCACTAATACATTACTCCCTCCTATCCAAATTAATTGGCACTGCTTTAGTACAACTTTAGGGAGTAAGTGCTTTTGTT
TGGGTTGAGCCGGTTTCAGTTCCCCTCTAATTTTGTTCTTTG--------------------------------------
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--------------------------------------TTCTTTTCCGCCACAAGCAGTCGCTGCTCTTTTTGTTCTTTG
TTGCAACTTGCAAACCATTCCCAAGAGACACTGAAATTTTGCGTAAATAAATTGAGAGGATAACCCAACAATCAAATGGG
AAATAAGTTACTGTCCCTATGTACTCCACAAAATGTTTTACCAATAGAACAAAAGCAAAGTGATTGATAGAACAACAAAC
TATAAAGAACAAATTCAAACAATTCAAGAAACATCCCATGAATGGTTTTACAAAAAATTAGAAATAGGAAAGTGAACATC
AGTACCATGAGATATAAAAAGGTGTGAATAAATGAAATAAATTGACAAAAAAATCTAGAGCAAAAGGGAAAAGGAAAAAG
TACATGAAAACAAATATTTTCCTCATTAAGTATTACCGACCAACAGATA-------------------------------
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----------------GCGGTAGCGACAACAACAAAGTAATCAACATTTGTGAAGCTACGCAC
>chr5A_512
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-------------------------------TCTGCCCCTTCATCCCTTCCATCTTCCCT-GTGGTGGATTATGATCATG
CATGGTACTGTCGTCGGTCGGGGCTCCGGTAGAACGAGTCAACCTGACAGTGATCCTCTGACCCACT-AAACTATCCCCA
GTCAACCGGAGTGACACTGACAGATCAACACGTGTGCTCACCGGATATTCTTAACAGACCTGTAAAGGCGACGCACTAAT
GACATTCTTAACAACCTAGGACGGTCCCGACGTGGCGGCTCGCCATTCGACCACCCGCCAAGAAAGATCATCTGAACTTT
ATGCTCTCTTGTGCTCCCC-----AGC-----TAATCCCTAGCAAAGGAAGCAACCAGGAGAGA----CGCGTCCCTGAA
ATTCTTTCCTGTTTCTCACCGCCATTGG-------CACCACCGGCCACTCTGTTTTTAAACCCTCGCCGTGATCCGGGTA
TCATCACACAATCACGGCCTGCAACTGCCATTGTCGTGT-----GCGGATGGCGGAGGAGCGGGAGGAGGCGGGCGTGGC
GCTGACGGGGAGGCGGGCGCGGGCGGACACGAGGCACCCGGTGTACCGGGGCATCCGGTTCAGGGGCGGCAAGTGGGTGT
CGGAGATCCGGGAGCCGGGCAAGGCCAGCAGGATCTGGCTGGGCACGTACCGGACGCCCGAGATGGCCGCCGCCGCGTAC
GACGTCGCCGCATTGGCGCTGCGGGGCGCCCAGGCCGCCGGCCCCGCGCTCAACTTCCCCGGCGAGGCGCTGACGCGGCC
CGCGCCGGTCTCGGGCGCGCCGGACGACATACGGGCGGCCGCGGCCGCGGCTGCGGCAATGGTTGTCGACGCCGGCGGCA
GC---------------------------------TCCGGGAGCTGCGGTGCGGGTGAACAGGGCCGCGTCGTGGACGAG
GATGACGTCTTCGAGATGCCGCGGCTGCTGGCGAGCATGGCGGAGGGGCTGATGATGAGCCCGCCGAGGCTGGGCGCGGC
GACGGCGGTGGACGACGACCAGGATGGCAGCATGAGCTTGTGGGAGCACTCCTGAGATTCTCTTCTCCT--------GTG
TAGCCGGTGTGTTGCACATGCACTAGTACGAAACTTGAACGGGAAGACATAGCACACAAGTACAGAGAGCTGTGCGAATT
TTGCGGTTCCCCTTATCGATACGTGGCATGATGATCTCGTCGCATTGGTCATCCGTCCAGTCCA----------------
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------------------------------------------------------------------------GGATA---
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>chr4D_525
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--------------------------------------------CCCTTTCATCTTCCCT-GTGGTGGATTATGGTCATG
CATGATACTGTCGTCGGTCGGGGATCCGGTAGAACGAGTCAACCTGACAGTGATCCTCTGACCCAGT-AAACTATCCCCA
GTCAACCGGAGTGACACTGACAGATCAACACGTGTGCTCACCGGCTATTCTCAACAGACCTGTAAAGGCGACGCACTAAT
GACATTCTTAACAACCTAGGACGGCCCCGACGTGGCGGCTCGCCATTCGACCACCCGCCAAGAAAGATCATCTGAACTTT
TGGCTCTCTCGTGCTCCCC-----AGCTAAGCTAATCCCTAGCCAAGGAAGCAACCCGGAGAGA----CGCGTCCCAGAA
ATTCTTTCCAGTTTCTCACCGCCATTGG-------CACCGGCCTCCCCTGTGCTTTTAAACCCTCGCCGTGATCCCAGTA
GCATCATGACAA-------------------------GT-----GCGGATGGAGGAGGAGCGGGAGGAGGCGGGCGTGGC
GCTGACGGGGAGGCGGGCGCGGGCGGACACGAGGCACCCGGTGTACCGGGGCATCCGGTTCAGGGGCGGCAAGTGGGTGT
CGGAGATCCGGGAGCCGGGCAAGGCCAGCAGGATCTGGCTGGGCACGTACCGGACGCCCGAGATGGCCGCCGCCGCCTAC
GACGTCGCCGCATTGGCGCTGCGGGGCGCCCGGGCCGCCGGCCCCGCGCTCAACTTCCCCGGCGAGGCGCTGTCGCGGCC
CGCGCCGGCGTCGTGCGCGCCTGACGACATACGGGCGGCCGCGGCCGCGGCCGCGGCGATGGTTGTCGATGCCGGCGGCC
------------------------------CCGGGTCCGGGAGCTGCGGCGCGGGTGAACAGGGCCGCGTCGTGGACGAG
GACGACGTCTTCGAGATGCCGCGGCTGCTGGCGAGCATGGCGGAGGGGCTGATGATGAGCCCGCCGAGGCTGGGCGCGGC
GACGGCGGTGGACGACGACCACGATGGCGGCATGAGCCTGTGGGAACACTCTTGAGATTCTCTTCTCCT--------GTG
TAGCTGGTGTGTTGCACTTGCACTAGTACGAAACTTGAACGGGCAGACATA-CACACGAGTGC--AGAGCTGTGCGAACT
TTGCGGTTCCCCTTATGGATACGTGGCATGTTGATCTCGTCATATTGGTCATTCGTCCAGTCCAAGATAAAATGTTTTTT
TTCGAAAGTACGCCTTGGCGTACCATAGCTTTATAGAAGGCTGAATTTGAGTTACAAGAAACTACACTCGCTGCGGACAA
CGAGCATAGCACAACACCACACCCAAACACAACACCGCATGGCAAGCTACAACACAAAGGGCTTATCCTAATCGAAACTC
AACACCGCGTCTCAACCGACGTCGGACATCTCCGAAGAACACCAACTTCCGCAAAGCTTCACTTGTCGACGCACCATCCA
CTCTTATCGCCTAAGAGGAAGTGGCAAGTGGGTGGTAGGACTCGATCCGATCTGAGAAAGACGCCGTCTTGGACACACCG
ACAACGGGCGTACATAGCGCCGCAAAGGATCAAGGAGGACAGCGGCAAACACCGGAGGAGAGCGACGAGGAGCCGGCCAT
GTCTCCAAACACAATGCTCCCAGCAGAGGAACGTCGTCGAAGACGCCGCCATTGTGCCGATCCAACCGAATCGAGGCTTT
CGCCCGGAGACAACCACAACTCCGGGCGAGTGAGGGAGGTGACGAGCACGCCACGACGACGCCTCCAAGGAGGGGAATGG
CATCCGCGGGTGCCATCGCCGCCGGCCCGACGGAAGCCGTGCAAGATTTTCATCCGCGCGTCACACCTCACTACACCATC
TAGAATTGGGCAACACCGTCCCAGAAGCTTCACACCGCCGCCACCGCAGCACTTAGCCAACGTAGCCGCCAAGCCGAGGG
CCATCGACCGGACGCACAAAAAGAAGAACACCAGCCACGCCATCAACGCCCCGCCTGGACAGGAACCCCAGCCTCACCGC
ACCTCCGGCAAGTCCAGGCCGCCCGCAACAGCCATCACCCACTCCAAGGAACAGCCTTGCGACGACTGGACCCGCATCTC
GACAAAGCCATGCTGCACCATCGGAGGAGCATCCCTGCTCATCACGCCGAACAGAAGTGGTCGGCCGCTCGCTGCTCGCC
AAGACTCCATCTTGGCCGAGCCTCACGGCGCCAACTCCACCCAACTGGCCGCGGACTCGCGCTTTTGCCACCGAACGGCG
CCGCAACCGGCCAACCGCACCTTTGCCTCGCTGCCGACTCCTACCAGGCCCGCCGCACCGCCATGTCTCCTGCTGAGCTC
CGGCCACCACCCCCATCTCCGGCCAGCGCAGATCTGACCGGGCCGAACCCGCCATGAAGCGAACGCCGCGCTGCCACCAG
CACGCGCGCTCCACCGCGACACACCTGCACCGGCCAGCAGCAGCGCCGCCACACACCATCGCCTGCCAGCGCGTCCTACC
CGACGCTCCGGCCACCGAGGTCCGCCGTTGACTGAAGAAGAGCCCCCCGCGGCCTTGCTCCAGGGAGGCGAGGGAAGATC
CCGCCGCCGCCGGCACCACGCGGGCTTTGCCCGGCGGCGGGAGGGGAGGAGATGGGATCTGGGGGAGGCGGCTAGGGTTC
TTGCGCCCGGGCCGCCCGCGGGGGGACGACACGGGGCCAGGGGGAGGAGAGAGTCTATGATGTAATTGTCCAAGATAAAA
TGTCATCAGTGAGAAATAC-------------------------------------------------------------
--------------------------------------------------------------------ACAAACTAACAA
GGGAACCGTTCCCTAGAAAACAAAATATTCAAATCACGATATAATACAAAGTTCTTAACCCGAACAACCACACCCTAACA
CACGCATAAACAACCAGAATAACAAAGAGCACCCTAAAACAACCAGCAAAACATGAAGACCTCCGGAGCTCTGTGTCATC
ATCCCTAAACCTTGCGAGGAGACCCCTTGCAACACATTAATCTGCATCCAGACCCAAGCAGGTCCTCATCTTCAACCACA
ACAAAATCATCGCCATGCTGCTCCCCCATTTCTTCGCTCTGACGCCAAAAAGACAAGGACACACATGTGCATCCAACACG
CCTGCACTAGCCTTCGCCATCTGTGGCTTTGAGTACCGCTATATGTGCCCCTTCCAAATGGAAGAGAACTAGTATCCGGT
TCCGGCGCCGCGGCCGGGCCAACCGCCCGGGTAAAGCAGGACATCCCTCCAACAACAACACAAAGAAGGATGAAGAAACA
CAACAGAAAATCATACTGACGAGGAAGAAGAATCTTCGTCTCCACCCAACCACCACCCATCTGAGGACCAAACTGGCCAG
TGCCGGTCGACCTCCAAACACCATAGCCCGCGACCTCAACGAGATCCGGGGATCCCCCACTCCACTGGTTCCTAGATGAA
GGCTAGAGCCCCGTCTGACCGCGAACGGAGCCCGTAGAAACTTATTCAGTCGTGCCGCCGCCGTGACGGCCTCGGTAGCG
ACTATCTCAACCCTAACCCTACTGAGAACACACCGGACGCACAGATCTGAGGTTCCCCCTCCCTCCCACCGCCGGAGTGG
TGGCGAAGGGAGGGAGAACCAACGACGGCGCCGACGACGCACAAAGGGATCCGCTGTTCTTGAGATCGCCTCGCTAACCA
CCCCCGAACTGGTTGGTTTGTTAACTTTTCGCCATCTCTCTAGATTACAACCTTGTCCAAACATGAAAAGATCACAGCCT
GCTCACTAATACATTACTCCCTCCGATCCAAATTAATTGGCGTTTCTTTAGTACAACTTTAGGGAGTACGTGCTTTTGTT
TGGGTTGGGCCGGTTTCAGTTCCGTCAAATCCGATGTGGTGCTTCACATTACCCCAAAGCAGCCCATATCAACTGTTATG
GAATAACGCAACTCATCTTGCTCCCTCTTTATTCTACGATCATCCCGATCCTTTTCTCCACCACAAACCTCAAGGGGCAG
CACCCGATATCCTTTCGCCGTCGTGGCGCCGACGATCTTTCTTTTCCGCCACAAGCAGGCGCTGCTCTGTTTTTTTCTTC
G------TTGCAAGCCATTCTCAAGA--------------------------------GATAACTCAACAATCAAATGGG
AAACAAGTTACTATCCCTATGTACTCTACAAAATGTTTTACCACTAGAACAAAATCAAAGTGATTGATAGAACAACAAAC
TATAAAAAT-AAATTCAAACAGTTCAAGAATGATCCCGTGAATGGTTTTACAGAAAGTTATAAATAGGAAAGTGAACATC
AATACAATGACATG------------------------------------------------------------------
-------AAAAAACAATTTTTCTCATTAGGCATTACCAGCCGATAATGACCCCTGGTTATTGTGCGAGCCAAAAGGGGTG
AAGTGGTATGCTAGTCCAATCTTCACTACAAAAAACACCTCCCTTGCTAGTTACCCAAAATTTCAGAGAAATCATACCAA
CGAGATGGAAACGATGGCGGTAGCGACAACAACAAAGTAATCAAAATTTGTGAAGCTACGCAC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------S-S--------SSS-S--SS-------------------
------------------------S-------------------------S-------S--------S----------S-
-------S-------------S----------------------------------------------------------
-S-S----------------------------------------S----------S--S--S------------------
-------------------SSSSS----------------------------------------SSSS------------
-----------------S----------SSSSSSS------------------------------------------S--
-------S---SS--SSSS-SSS-----------S----SSSSS------------------------------------
----------------------------------------------------------S---------------------
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----S---------------------S-----------------------------------------------------
------------------------------------------------S---------------------------S--S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------S-------------
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--------------------------------------------------------S---------SSSSSSSSSSS---
--------S--------------------------------S-------S----------------------S-------
------S---------------------S--------------------S------------S-----------------
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-S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---
-----SSSSSSSSSS-S---------------------------------------------------------------
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------------------------------S------------------------------S----------S-------
------------------------S----------------SS-S-----------------------S-----------
-------S---------------SSSSS-SSSSSSS-SS-SS--------------------------------------
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----------------------------------------------------------S---------S---S--SS--S
SSSSSSS------S------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---------------
---S--------S-------------S----------------S----------S-------------------------
------S-SS-----------S--------SS-----S--------------S---S---S-------------------
-S---S----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS---S--SS-----S-------S-S------SS--S-S-SSS--------------------------------
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--------------------------------------------S------------------
>forward_183
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---AAGGCAGGACCATGACTTGG---------------------------------------------------------
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>reverse_1592
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-----------------------------------------------------------------------CTGTGGGTG
TAGCTGGTCTG---------------------------------------------------------------------
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