>input_sequence_75684
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-------------------------ATGAAGAACACACCAATCATCTGCGTCGTCGCGGTATCTCTCGGGGCCATCTCCT
TGCTCTCCGGCAGCACCGACG---CCACCGCATGCGCCGGCGACCCGTCCATGTCCGTCGCCGACGCGTGCCACAAGACG
AGCGCCTGGCAGGGCCAGCGCGAGCTGGAGCTCTGCCGGCAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGC
CTACGGCGTCATCGCCGTGAGGGCCGCCCTCCAGTCGTCCGAGGCCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACC
CGAAGATCTCCGAGGACGCGCGGGCGGTGTACCAGAGCTGCGTGGACATGTACGGCTTCGCGCACGCGGACGTCGCCGCC
ATGGAAGGCGCGCTCAAGGCCTGCTCGCTCGCGGACTTCCGGCGCTTCTGGGAGGGCGCCCTCGCCTCGGTGGATCACTG
CGCGCGGAAGCTCCAGCTCGTCGACGGCGACGTGCTCCGCCGCACGGTGGAGGCGGACAGGGAGAGGATCTTGCTCGCTT
TCATCCTGGGAGGGCTTTCTTTTCCAAAATTGTAG---------------------------------------------
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>chr1A_1_TraesCS1A01G293000
CGCGGCCTCCTTCCTCTCTCTTCCCTTCCCCTTACCCTCCAATGAG-AAAAAAAT-------------------------
--------------------GAAAGAAAATGGGAAAGGAGCAAAGAAAAATATATATACTCAAGTAAGCTAGATAAGATT
TAATTCTGATTTAGAACAAAGATAGTGGCACCCATAAACTAATGCTACACATTGATTTTAAAAATTTATTGGA----CTC
TATAGTTTGTTGCATAATGATACGCATTAATGATTGTTTTTCTTCCTTTTCCCTTTTACTGAATTACTTTATCTGGGT-C
TATTTTTATTTTTTCCGCGCCGTGCGTAACTACACTTGCACAACTGCCCGGCCGTGCTCAACGGTATGTCCACATGCCAC
CCACTACTGCATTTGCATATTTTCTAAAATAGAAATGCAAAAAAGGTCAATAATA-------------------------
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-----------------------------------------------------------------AACATAAAATGAGAA
AAAAAATATAGAAGTGAAATAAAATGGAAAAGGGGGGAGAAAAAATATATA-----------------------------
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--------------------TGCTCAAGTGAGCTAGATGAGATTTAATTCTCATTT------------------------
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---------------------------------------------------------AGATCAGAGA---TAGGCACACC
CATAAACTAATGCTACACATTGATT----------------------------TTAAGCATTTATTGGGCTCTATAGGTT
ACTGC---------------------------------------------------------------------------
-------------------------------------------------------------------CATCCACTACTGT
ATTCGGTATTGTTTTAAAATAGAAATGCAACAAAAAATTCAAGAATAAAACGTAAAAATGGGAAAAATATAAAAGTGAAA
AAAAA-GGAAGCAGGAAAGATAAATATGTACTCAGGTGAGCTAGATTAAGATTAATGCTACACATTTAATTCTCATTTAG
ATTAGAGATA----------------------------------------------------------------------
-------------------CTAGCCACACCCGAAAACTAATGCTACACATTGATATTAAAGATTCATTGGCTTCTACAGC
TTGCTGCATAATGATACGCATTAATTGCTCTAGATATGCTGCATGTA-CAGTATAT-------TTTCAGTTTGGCTACTA
CACTCCTTGGCAGGGCCGTTCTATAAAAGCCATCCTTGTGTTCCTTCCCAT--ACACACAGAGGTTGCAGAGCGCGCATA
GGTTTATACAGAGATCGAG-CAAACATGAAGAACACACCAATCATCTGCGTCGTCGCGGTATCTCTCGGGGCCATCTCCT
TGCTCTCCGGCAGCACCGACG---CCACCGCATGCGCCGGCGACCCGTCCATGTCCGTCGCCGACGCGTGCCACAAGACG
AGCGCCTGGCAGGGCCAGCGCGAGCTGGAGCTCTGCCGGCAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGC
CTACGGCGTCATCGCCGTGAGGGCCGCCCTCCAGTCGTCCGAGGCCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACC
CGAAGATCTCCGAGGACGCGCGGGCGGTGTACCAGAGCTGCGTGGACATGTACGGCTTCGCGCACGCGGACGTCGCCGCC
ATGGAAGGCGCGCTCAAGGCCTGCTCGCTCGCGGACTTCCGGCGCTTCTGGGAGGGCGCCCTCGCCTCGGTGGATCACTG
CGCGCGGAAGCTCCAGCTCGTCGACGGCGACGTGCTCCGCCGCACGGTGGAGGCGGACAGGGAGAGGATCTTGCTCGCTT
TCATCCTGGGAGGGCTTTCTTTTCCAAAATTGTAGTATGCCTGCCTGGATGTGGAGATGTGGATTTTGGGTTGGTAATAA
TTCGGTGGTAACCCGACC-A--------TATGCGG-----TGGTATTTGTAGT-------------TGTCTAGATTTGGT
TGCAAGGTGTTTCA-GATGATAAAAAACCTACTGGCAAAAAATTGATTGAAACATG----TCATCTTTCTGGAATGCTGT
AGCA---TGCGCCTCTAAACTGTGAT------------------------------------------------------
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----------------------CCAAGATCACCCCAAGATCAC----------------------------CAGACAC--
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--------------------------------------------------AAGGGCCGCTTTTGAGTCTAGTCGAGGACA
AGAGAATTGTTTTCCGTGGTTACTTGCTGGCGCACGCTGATCACCCTGACATGAAGCACAACGCGAGGGCACACGCTGAT
CAGTGATCACTCATCCGTACTATCCTA-CTCCTCTTCCCAGTTTC-----------------------------------
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-----------------------------------------------------CCAAGACTGAAGAAATCACGTAGCGGT
AAGAGCAGTAGTAAAATGGACAGTTTGTGCCCACGCAAGAGCAGCAGCTTTACCATCTTTACAGCTCAAAACTCACAGCT
TCTTAAAGGAAGGGGAGAAAACTGGCACGGATCAAGCATACAGCACTGAGTTATCCGTTGCATA----GCACGCCAGGGT
TCCAAGTCTCCAAGATCAGCAAGACAGCAACACTTCAAGCAGCTTAA-----TAAACCCCTCCAATATACAGGTTCC---
-----TCTCAACATTACAATGCCAAGGATTAAGCTAAACTCCAGATTCCGCAACGGCATACAT----GTAATAGCTGATG
ATAACAAGATCCCAGAACAGTCTAAGGCAAGACGCTAATAGCCCTAACATCACCTTCTAAAAGA------TACTGATCCA
TCCAAAGTTCAAAGGAC-------ATAACACTGAGCCATGTAAAA----------AA-----------AATGCAAGACAT
CCATCAGAATTTGCCCAAAGTGTGGCTGAGCAAGTTGTAAACACTGTTGAACGCAATGTGGTTGCACCACCCGTGCGCCA
TGAGGTCCACCCGGCTGCATGAGGTAGTTAGGATAGATAGATAGAGATAGATTATTTTCCTTGATCTCCAAGTTCTATCT
CTTCCTTGAA
>chr1D_1
CGCGACCTCCTTCCTCTCTCTTCCCTTCCCCTTACCCTCCAATGAGAAAAAAAAT-------------------------
--------------------GAAAGAAAATGGAAAAGGAGGA--------------------------------AAGATT
TAATTCTGATTTAGAACAAAGATAGTGGCACCCATAAACTAATGCTACACATTGATTTTAAAAATTTATTGGAT----TC
TATAGTTTGTTGCATAATGATACACATTAATGATT---TTTTTTCTTTTTCCCTTTTATTGAATTACTTTATCTAGGT-C
TATTTTTGTTTTTTCCGCGTCGTGCATAACTACACTTGCACAACTGCCCGGCCGTGCTCAACGGTATGTGCACATGCCAC
CCACTACTGCATTTGCATATTTTCTAAAATAGAAATGCAAAAAAGGTCAAGAATA-------------------------
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-----------------------------------------------------------------AACATAAAATGAGAA
--AAAATATAGAGGTGAAATAAAATGAAAAAGGGGGGAGAAAA---ATATA-----------------------------
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--------------------TACTCAAGTGAGCTTGATGTGCTTTAATTCTCATTT------------------------
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---------------------------------------------------------AGATTAGAGA---TAGCCACACC
AATAAACTAATGCTACACATTGATTACCCTTAAAAAAATGCTACACATTGATTTTAAGCATTTATTGGGCTCTATAGGTT
ACTACATAATGATACACATTAATGGTTTTATTTTAATTTTTTCCATTTTGTACTAAATTAGTTTATTTGGGTTCTATTTA
TTTTTAT-GCCGCGTGTAACTACACTTGCATGACTGGCCGACTGTGCTCAACAGTATGTCCACATGCCACCCACTACTGC
ATTTGAATATTTTCTAAAATAGAAATGCAAAAGGAA--TCAAGAATATAACGT-AAAATGGGGAAAATATAAAAGTGAAA
AAAATTGGAAGCAGGAAAGATAAATATGTACTCAAGTGAGCTAGATTAAGATTAATGCTACACATTTAGTTCTCATTTAG
ATTTGAGATACCCCCAAAAACTAATGCTACACATTAATTGCTCAAAATATAAGTGTGATTAATACTGTACATGCAGCATA
TCTTGAGATTAATGGAGTACTAGCCACACCCAAAAACTAATGCTACACATTGATATTAAAGATTCATTGGCTTCTACAGG
TTGCTGCATAATGATACACATTAATTGCTCTAGATATGCTGCATGTA-CAGTATAT-------TTTCAGTTTGGCTACT-
-ACTCCTTGGCAGGGCCGTTCTATAAAAGCCGTCCTTTGTTCCTTTCGAT-------ACACAGGTCGAAGAACGCGCATA
GCTTTAAACAGAGATCGAG-CAAACATGAAGAACACACACATCATCTGCGCCCTCGCCGTATCTCTCGGGGCCATCGCCC
TGCTCTCCGGCAGCACCGACG---CC---GCATGCGCCGGCGACCCGTCCATGTCCGTCGCCGACGCGTGCCACAAGACG
AGCGCCTGGCAGGGCCAGCGCGAGCTGGAGCTCTGCCGGCAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGC
CTACGGCATCATCGCCGTGAGGGCCGCCCTCGAGTCGTGCAAGGGCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACC
CGAAGATCTCGGAGGACGTGCGGGTGATGTACCAAACCTGCGTTGACATGTACGGCTTCGCGCAGGCGGACGTCGCCGCC
ATGGAAGGCGCGCTCAAGTCCTGCTCGCTCGCGGACTTCCGGCGCTTCTGGGAGGGCGCCCTCGTCTCGGTGGATCACTG
CGCGGGGAAGCTGCGGCTCGTGGACGGCGACGTGCTGCAGCGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTT
TCATCCTGGGAGGGCTTTCTTTTCCAAAATGGTAGTATGCGTG----GATGTGGAGATGTGGATTTTGTGTCGATAATAA
TTCGGTGGAAACGCAATAATACATGGCTTATGCAG-----TGGTATTTCTAGC-------------TGGCTAGATTTGGT
TGAAAGGTGTTTCT-TTAGAAAAAAAACTACTGGC---AAAATTGATTGAAACATG----TCATCTT-CTGGAATGCTGT
AGCATTGTGTGCTTGTCACATTTATTTTTGATTCGACTCTGCTCATATTTTGAACTG-----------------------
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---------------------------------------------------------------AGCTGGGAAAAATCATG
TGACACATGTGGTAATCAATCCTAAGAGCAACTCCAACGGGCCAACCTAAACGGATGGTGTTTTTATCCGTTTGGGTCCG
CCAGGCGGACACGGATGTCCGCCTCCGCGTTTGGGTCCGCGCATGCGCCCTACGCTGGCCCGACCCATTTTGACGGCGCT
AGAAAAATAAATAACGCATGCATATTAAAAAAGAAAAACAACATTAATTAAATAATAAAGCCGGCCACGAAGGCCGGCGA
GAGTCCCCGCGTCCACATTTTCATTTAAAAAAATAACAACAACCTAAACTACGAGGTGGCGCGCTGCCCTAGGCGGCGGC
GGCGTCGTCCTCGGGGTCCGTGAGATCGATGAGCGTCGGCGCCGGCCCGGCCCAGGGAAACGTCGTGTTCCAGAGCGCGT
TCATGTCGGGCGCAGGCTGTGCCGGCGCGGGGGCTGTGCGGCCGCCTGTGCAGCCGCGGCCTGGCGCGCCTCCTCCTCGG
CCTCGTGCTGCTCCTCCTCGAGTTCGCGCTCGAGCATGTCGAGGTACTCGCCGTCGCGGCGCTCCTCGGCCACCCGGATC
TGGCGCCAGTGCTCGAGGTACGCCGCCTCCTGCGCCGACGTCGCCCCCACCCAGACCGGCGGCGCGCGTACCCACTCGCG
CACTACTCCCGTCCAGGAGTAGCGCTCGATGGGGGACGGCTGCGGCTGCGGCTCCGGCTTGACGCGGCATCGGGGAGGGG
ACGGCGGGGCCACCGGCGGCACCACGCAGTCGCCCGCCACGGAGAGGGCAAGTGCGTGCGCCATTGCCGCCTCGTACCGA
GCCTCCTCTTCCTCCGCCGCCTCCGCCCTGCGCCGCTCGTCCTCCTCGCTCTCCCGGTAGACGGCCGCAAGGGCCGCCTG
GTAGGCGTCCTCCGCCGCCTGGTCCTCCTCGCAGACGACGAGCAGCGGCGGCGGCACGCTCCGGTCGACCTCACGCACGC
CCCGTCGCCTCGCCTCCTCGTGCTCGAAGGCGAACCACCTCGCCGAGTTGGGCGAGTCGGATGCGTAGGCGGCGTCGCGG
CGCTGCTCCGGCATCAGCAGCGTCCGCCGGCGCCGCACCTCCTCCGCGTGAGCCCTAGCCGTCTGTGGCGCCGACGGCAT
TGGGATCCTATCCGGATCCAGATGCCAGTCGTGCGGCAGGGTGGCGTCGGGGTACGGCAGAGGCACGCTGTGCTGCCAGT
GCCACTCCGCCTGTTGCACTGGCACGTTCATGCGTTGCCTCTGCCGGCGAGGCGCCGGCGCCGGCGGAGGCGGGAGGAAC
TCTGAGGGGAAAGGGGTGGCGGGGGCCTTGCCCTTGGCCTTGCTGCTGCTGGCGCCGGAGAAGAGCCCCATCTCGCTGTG
GTTGTGGTGGCTAGGGTTTGCCGGCGACGGGGGAGCAAGGCTTGCTAGATGTGGACGGCGAGTTTGGATGAGGACGACCA
CGCTGCATGGTCGGCTTAAAAAAGGACGAGCGCCGTTGCTGACGTGTGGTCCCGTGGTCATAAATTAAGCTGACCGCGTG
GGCAGCGGGTAGTTGGACGACCGCCATGTGGGGACGCGGCGGACAGTGAGAAGGCGCGCGTAGCGTCCGTTCGGCGTCCG
CACCGACGCATTTGGGGCGCAAATTTGGGCCGCAAATGCGTCGGTGCGGACGCGATGCAGACATCATTTGGATTTGGGTC
GGCGCATTGGACCGCCACTTTTGTCCGCGTCGATCCAAACGGACGCAGGCGAACGAAATAGGCCGGCCTTTTGAAGTTGC
TCCAACTATTCAGAAAAAGAAAAAAACTGAGATGAGAAAGGTGTCGTCGTC----------------GAATGTTGTAGCA
TCTGTTTCTCACGTGTCATCCCATGG-----TATGTTCCAGGCCAGCACCA---ATAGCGAGAAACGCATTGAGAGACGA
TGATCAGGGGAGGGCTACCGAACATGCACTTTGTTTTCCTATGTGCTCCATCTTATTCGTGTTGACGATGGCGCTCGGGC
TTGGTATGGGGCTAGACAT------TGCAGCCTAGCTGGTCATCG-----------------------------------
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----------------AGCAAAGCATTTGAAGTACTCACTCGTTTCAAAATAGATGACTCAATTTTATACTAACTTTAAT
ATAATATTGAGTCATCTATTTTGGAACGGAGGGAGTAGTTGACAAATAAAATGACAAAACTGATGAAGTCACGTAGGAGC
AAGAGC---AGTAAAATGGACAGTTTGTGCCCACGCAAGAGCAGTAGCTTTACCATCTTTACAGCTCAAAACTCGCAGTT
TCTTAAATGAAGGGGAGAAAACTGGCACGGAGCAAGCATACAGCTCTGAGTTATCCATTGCATATATAGCACGCGAGGAT
TCCAACTTTCCAAGATCTGCAACACC--------TCAAGCAGCTCAA-----TAAACCTCTCCAAAATACAAGTTCATCT
CGCCATCACAAATTCACAATGCCAGCGTTTAAGCTAAACTCCAGGAGTCCAGGTTCCGCAATGGAAGGTAATAGCTGATG
AGAACAAGACACCAGAACATTCTAAGCCAACACACTAACAGTTATAGCTTCACCCTCTAAAAGATACTACTACTGATCCA
TCCAAAGTTAGAAGGAC-------ATAACACTGAGCCATGTAAAACAAAGCCAAAAA-----------TATGTAAAACAT
CCATCAGATTTTGCCCAAAGTGTGGTTGAGCAAGTTGTAAACA-------------------------------------
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>chr1D_49
TATGTCCACAAGCCATCCACTACTGCATTTGGACATTTTCTAAATAGAAATGCAATAAAAAAGTTGAGAATAAAGCGTAA
AATGAGATAAATATAGAACGGAAAGAAAATGGAAAAGAAGGAAAGAAAAAA--ATATACTCAAGTAAGCTAGATGAGTC-
TAATTCTCATTTAGATCAGAGATAGCCCCACCCATAAACTAATGCTACACATTGATTTTAAGGATTTATTTATTGGTCTC
TATAGGTTGCTGCATAACGATATACATTAATGATT---TTGC---TT------TTCTTTTGAATTACTTTATCTGGGTTC
TATTTTTGTTGTTTACACACCGCGCCTAACTACTTTTGCATGACTGCCCAGATGTGCGCAATAGTGTGTCCACATGCCAT
CCACTACTCCATTTGCATATTTTCTAATATAGAAATGCAATAAAAAAGTTGAGGATAAANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGCTCTATAGGTTGCAGCATAATGATACACATGAATGATTTTTTTTCCTTTTCTACTGGA
TTAATTTATCTGGTTTTTTTTTTCACGCGGCGTGTAACTACACTTGTACGACTTCCCAGTTGTGTGCAAAGTATGTTCAC
AGGCCGTCCACTACTGCATTTGCATAATATTTTAAAATAGAAATGCAATAAAAAGTCTAGAATAAAACGTAAAAT--GAG
AT-AAATATAAAAGTGAAAGAAAATGGGAAGGAAGAAAGAAAAAT---ATA-----------------------------
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--------------------TACTCAAGTGAGCTAGAGGAGATTTAATTCTCATTT------------------------
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---------------------------------------------------------AGATCGAAGA---TAGCCACACC
CATAAACTAATGCTACACATTGATTATAAAG----------------------------ATTTATTGGGCTCTATAGGTT
GCTGCATAATGATACACATTAATGATTTTTG-----TTTTTTTCCTATTCTACCGAATTATTTTATCTGGGTTCTATATT
TTTCTCACGCCACGCGTAACTACACTTGCATGACTGCCCGCTG------------ATGTCCACAAGCCGTCCAGGACTGC
ATTTGCATTTTTTAAATAGTTGAA-------------------AATAAAACGT-AAGACGAGAAAAATATATAAGAGAAA
GAAAATGGAAAGGAGGAATG-AAAATTATACTCATGTGAACTAGATGAG--------------ATTTAATTCTCATTTAG
ATCAGAGATATCCG------------------------------------------------------------------
--------------------------CACCCATAAACTAATGCTACACATTGATTTTAAGGATTCATTGGCTTCTACAGG
TTGCTGCATAATGATACACATTAATTTCTGAAGATATGCTGCATGCA-CAGTATATTTTCAGTTTTCAGTTTGGCTACT-
-ACTCCTTGGCAGGGCCGTTCTATAAAAGCCATTCTTGTGTTCCTTTG-AT--ACACACAGAGGTTGCAGAGCGCGCA--
------GACAGAGATCGAG-CAAACATGAAGAACACACCAACCATCTTCACCCTCGCCGTCTCTCTCGGGGCAATCGCCC
TGCTTTCCGGCAGCACCGACGCCACC---ACATGCGCCGGCGACCCGTCCATGTCCGTTGCCGACGCGTGCCACAAGACG
AGCGCCTGGCAGGGCCAGCGCGAGCTGGAGCTCTGCCGGCAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGC
CTACGGCATCATCGCCGTGAGGGCCGCCCTTGAGTCGTCCGAGGCCACCGAGGGCGCCGGCAAGAAGCTGGCGCAGGACC
CGAAGATCTCCGAGGACGTGCGGGCGGTGTACCAAACCTGCGTGGACATGTACGGCTTCGCGCGCGCCGACGTCGCCGCC
ATGGAAGGCGCGCTGAAGGCCTGCTCGCTCGCCGACTTCCGGCGCTTCTGGGAGGGCGCACTCGCCTCGGTGGATTACTG
CGCGCGGAAGCTGCGGCTCGTCGACGGCGACGTGCTCCGCCGCACGGTGGAGGCGGACAGGGAGAGGATCTTGCTCGCTT
TCATCCTGGGAGGGCTTTCTTTTCCGAAATGATAGTATGCCTG----GATGTGGAGATGTGGACTTTGGGTCGATAATAA
TTCGGTGGTAACCCAATGGA--------TCTGCGG-----GGGTATTGGTATTTTTCAAAATAGCATGTCTAGATTTGGT
TGAAAGGCGTTTCA-AAAGAAAAAAAAGTACTGAC---AAAATTGATTGAGACATG----TCATCTT-CTGGAATGCGGT
AGCA---TGTGCTTCTCGCATTTATTTTTGATTCGACTCCACTCGC--TTTGAGCTG-----------------------
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---------------------------------------------------------------AGCTGA-----------
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------------------------------------AAAGGCGTTGTCGACGAGGCATGTGAATTCGGGATATTGTAGCA
TCTGTTTCTCAAGTGTCATCCCGCTGAGAC---------------------------------------TTGAGAGCCGA
TGATCAGGCGCATCCCGCTGGCAACGGAAATGCACCAAGACCTCAACAC-------------------------------
---------------------------ATTATCGCCCGTCAGCGGCCATCTCGTACGCACACAGCACGTACCAAGCACCA
TCCTGCTGAGGTGTTCCCAATAAACTTTGTGCAAATTCACAGGGTGAATTCGCACCCTTCGCTCAGATCTCACGGATCGA
GCAATCAGAGCCGGATACAATGGTGGATATTGATGAATCAGTGGAGGTGTAAGGGCGGCTTTGAATGCCAAATGTCAGCG
ACCTTGTGCTTAATTAGTTCGCTCAATCATGTGCGTACTAGGAAAATACAGCCAGCAAGGTG------------------
----------TCATCCGTACTATCCATCCTACTCTTCCCTGTTTCCATACTCAACTGTAGTTTCTCTGTTCGACCTAATT
GTCAGAAAGAAATTCCAGCAAGGCATTTGTAATACT--------------------------------------------
------------------------------------AGTTGCCAAATAAAATGCCAAAACTGAAGAAATCACGTAGCGGT
AAGGGC---AGTAAAATGGACAGTTTGGGCCCACGCAAGAGCATTAGC-TTACCATCTATACAGCTCAGAACTCACAGTT
TTTTAGACGAAGGGGAGAAAACTGGCACGGAGCGAGCATACAGCACTGTGTTATCCATTGCATA----GCACGCAAGGGT
TCCAAGTCCCCAAGATCATCAACACTA--------CAAGCAGCTTAA-----TAAACCCCTCCAATATACAGGTTCC---
-----TCCCAACATTACAATGCCAAGGATTAAGCTAAACTCCATATTCCGCAACGGCGTACAT----G---TAGCTGATG
ATAACAAGATCCCCCAACAGTCTAAGGCAAGGCACTCGTAGTTCCGACAACACCTTCTAAAAGA------TACTGATCCA
TCCAAAGTTAAAAGGACATAACAGATAACACTGAGCCATGTAAAA----------ACAACAACCAAATAATGCAAGACAT
CCATCAGATTTTGCCCAAAGTGTGGTTGAGCAAGTAGTAAACAC------------------------------------
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>chr1B_54
TTTGT---------------------------------------------------------------------------
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---------------------------------------------------------ACCGAATTAGTTTATTTGGGTTT
TATTTATTTTTAT-----GTCGTGTGTAACTACACTTGCATGACTGGCCGGCTGTGCTCAACAGCATGTCCACATGCCAC
CCACTGCTGCATTTGCATATTTTCTAAAATAGAAATGCAAAAGG------------------------------------
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--------------------------------------------------AAAAATCGAGAATAGAGCGTAAATT--GAG
AAAAAATATAGAAGTGAAATAAAATGGGAAAGCGGGAAAGAAAAATATATA-----------------------------
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--------------------TACGCAAGTGAGCTAGATGAGATTTAATTTTCATTT------------------------
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---------------------------------------------------------AGATTAGAGATACTAGCCACACC
CATAAACTAATGCTACACATTGAT--------------------------------------------------------
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------------------------------------------------------ATTAAGGATTCATTGGCTTCTACTGG
TTGCTGCATAATGATACACACTAATTGCTCTAGATATGCTGCATGTA-CAATATAT-------TTTCAGTTTGGCTACT-
-ACTCCTTGGCAGGGCCGTTCTATAAAAGCCGTCCTTGGGTTCCTTCCGATACACACACAGAGGTTGCAGAACGCGCATA
GGTTTAGACAGAGATCGAG-CAAAAATGAAGAGCACACCCATCATCTGCGTCGTCGCCGTATCTCTCACGGCCATCGCCT
TGCTCTCCGGCAGCACCGACG---CC---GCATGCGCCGGCGACCGGTCCATGTCCGTCGCCGGCGCGTGCGACAAGACG
AGCGCCTGGCAGGGCCAGCACGAGCTGGAGCTCTGCCAGAAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGC
CTACGGCATCATCGCCGTGAGGGCCGCCCTTCAGTCGTCCGAGGCCACCGAGGGCGCCGGCAAGAAGCTGGCGCAGGACC
CGAAACTCCCCGAGGACGCGCGGGCGGTGTACCAGATCTGCGTGGACATGTACGGCTTGGCGCGCACCGACGTCGTCGCC
ATGGAAGGCGCGCTCAAGGCCTGCTCGCTCGCGGACTTCCGGCGGGTATGGGAGGGCGCGCTCGCCTCGGTGGATTACTG
CGCGGGGAAGCTGCGGCTCGTCGACGGCGACGTGCTGCAGCGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTT
TCATCCTGGGAGGGCTTTCTTTTCCGAAATGATAGTATGCCTG----GATGTGGAGGTGTGGATTTTGTGTCGGTAATAA
TTCGGTGGAAACCCAGTTGA--------TATGCGG-----TCGTATTTGTAGT-------------TGA-TTGATTTGAT
TTAAAGTTGTTTCA-AA--AGAAAAATCCACTGGC---AAAATTGATTGAAACATG----TCATCTT-CTGGAATGCTAT
AGAA---TGTGCTTCTCACATTTATTTTTGATTCGACTCTGCTCGTATTTTG----------------------------
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------------------------AACTGAGCTGAGAAAGGCGTTGTCATG----------------GAAA---------
---GTTTCTCACGTGTCATCCCATG----------TTCCGGGCCAGCGCC----ATAGTGAGAAATTCACTGAGAGCCGA
TGGTC-----AGGGCTACTGAACATGCACTTGTGATGAGGCACGTCGACCTGGATCTGGATTCATGAATGCCCGATCCGC
AGCCAACGAGCCTCTAAACTCACCAAGATCATTCCCCTTTTTCTGGCACCACCCATACATACAGCAACCGTCAGACAC--
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--------------------------------------------------AAGGGCCGCTTTTGAGTCTAGTC-------
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----------
>chr1B_87
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----------------------------------------------------TATATACTCAAGTGAGCTAGATGAGATT
TAATTGTCATTTAGATCAGAGACAGCCACACACATAAACTAATGCTACACATTGATTTTAAGGATTTATTGGGCTATATA
G---GTTTACTGCATAATGATACACACTAATAATT---TTTTTCATT------TTATACTGAATTAGTTTATTTGGGTTT
TATTTATTTTTAT-----GTCCTGTGTAACTACACCTGCATGACTGGCCGGCTGTGCTCAACAGTATGTCCACATGCCAC
CCACTACTACATT---ATATTTTCTAAAATAGAAATGCAAAAGG------------------------------------
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--------------------------------------------------AAAAATCGAGAATAGAACGTAAAATGAGAA
--CAAATATAAAAGTGAAATAAAATGGGAAAGGGGGAAAGAAAAATATATACTCAAGTGCGCATGTGCGCGCGCGCCTGT
GTGTGTCTCATCACTCCTCGGGGCCAACTCCTCCTATTCATCGCATCTCTCCCTGACTCGGTCTCCTCCACAAGCTGTAG
CACCACCCCACGCCATGGACGCCCTTGCCGGCTGCATCTCCACCAGCACCGCAATGGGCGTGGCTCTATAGGTTGCTGCA
TAATGATACACATTAATGATTTTTGTTTTCTTTTTTTTCCTTTTCTACTGAATTATTTTATCTGGGTTCTATATTTTTCT
CAGGTCACGGGCAACTACACTTGCACGAATGCCCGCTGTGCGCAACAGTATGTCCACAAGCCGTCCACAACTGCATTTGC
ATTTTTTTTAAATAGAAATGCAATAGAAAAGGTCGAAAATAAAATGTAAGATGAGAAAAATATAAAAGTGGAAGAAAATG
GAAAGGAGGAAAGAAAAATATACTCATGTGAACTAGATGAGGTTTAATTCTCATTTAGATCAGAGATATCCACACCTATA
AACTAATACTACACATTGATTTTAAGGATTTATTGAGCTCTATAGGTTGCTGCAAAATGATACTCCCTCCGTTCCATACT
GTAGTGCCTATAGATTTTTGCAAAAGTCAAACATTACAAACTTTGACCATATTTATAAAGAAAAGCAGGTACATCTAGAA
TACCAAATGCACATCATTGTATACATGATGAATTATATTTTCAAAATGTACATGTTTGGTATTGTAGATGTAGACAGTTT
TCTTTATATACTTGGTCAAAGTTGGCAAAGTTTGACTTTCACAAAAATCTATAGGCATTATTTTGTATACATTAATGATT
TTCCCTTTTTACTGATATCTGGGTTCTATTTATTGTTTTTCACCCCGGGGCTTAACTATGCTTGCATGACTGCCCAGCTG
TGTGCAAAAATATGTCCATATGCCATCCACTACTGCATTTGGAGATTTTCTAAAATAAAAATGCAATAAAAAAGTCAAGA
ACAATGCGTAAAATGAGAAACATATAGAACTGAAATAAAATGGAAAATGAGGAAAGAAAAATATATACTCGAGTGGGCTT
GATGACGTTTAATTCTCATTTAGATGAGAGATAGCCACACCCATAAACTAATGCTACAGATTTATTTCAAGGATTTATTG
GGCTCTATAGGTTACTGCATAATGATACACATTAATGTTTTTTTCTTTTTTTCATTCTGTTCCGAATTAGTTTATTTGGG
TTTTATTTATTTTTACGCCGCGTGTAACTACACTTGCATGACTGGTCGGCTGTGCGCAACAGTATGTCCACATGCCACCC
ACTACTGTATTCGCGTATTTTCTAAAATAGAAATGCAACAAAAAATTCAAGAATAAAACATAAAATGGGGAAATATAAAA
GTGAAAAAATGGAAGCAGGAAAGAAAAATATGTACTACCTCCGTTTCAGTTTACAAGTCCTGCGCGTATACCTAGGTTGC
CAATTTTATCACCCTAATATAAACTATATAACATAAAAATTATATCTTTTGAAAGTAGAAACTCCGAAGTTTATGTTGGT
ATATTTTTTTGTAATATATGACTTGTATTAGGTTGGTTACGACCTAGGGATATGCGCACGCCCTGTAAACTGAGAGAGAG
GTAGTACTACTCAAGTGAGCTAGATTAAAATTAATGCTACACATTTAATTCTCATTTAGATTAGAGATACTAGCCACACC
CAAAAACTAATGCTACACATTGAT--------------------------------------------------------
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------------------------------------------------------ATTAAGGATTCATTGGCTTCTACAGG
TTGCTGCATAATGATACACATTAATTGCTCTAGATATGCTGCATGTACCAATATAC-------TTTCAATTTGGCTACT-
-ACTTCTTTGCAGGGCCGTTCTATAAAAGTCGTCCTTGGTGTT-------------------------------------
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>chr1B_933
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----------------------------------CTTGGGTTCCTTCCGATACACACACAGAGGTTGCTGAACGCGCATA
GGTTTAGACAGAGATCGAACCAAACATGAAGAGCACACCCATCATCTGCGCCCTCGCCGTATCTCTCGGGGCCATCGCGC
TGCTCTCCGGCAGCACCGATG---CC---GCATGCGCCGGCGACCGGTCCATGTCCGTCGCCGGCGCATGCGACAAGACG
AGCGCGTGGCAGGGCCAGCGCGAGATGGAGCTCTGCCAGAAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGC
CTACGGCATCATCGCCGTGAGGGCCGCCCTTCAGTCGTCCGAGGCCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACC
CGAAGATCTCCGAGGACGTGCGGGCGGTGTACCAGAGCTGCGTGGGCATGTACGGCTTCGCGCGCGCGGACGTCGCCGCC
ATGGAAGGCGCGCTGAAGGCCTGCTCGCTCGCGGACTTCCGGCGCTTCTGGGAGAGGGCGCTCGCCTCGGTGGATTACTG
CGCGCGGAAGCTGCGGCTCGTCGACGGCGACGTGCTGCAGCGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTT
TCATCATGGGAGGGCTTTCTTTTCAGAAATGATAGTATGCCTGCCTGGATGTGGAGGTGTGGATTTTGTGTCCGTAATAA
TTCGGTGGAAACCCAGTG-A--------TATGAGGGGGTTTGGTATTTGTAGT-------------TGTCTAGATTTGGT
TGAAAGGTGTTTCCTAA--AAAAAAAACTACTGGC---AAAATTGATTGAAACATGCATGTCACCTT-CTGGAATGCTGT
AGCATTGTGTGTTTCTCACATTTATTTTTGATTCCACTCTGCTCGTATTTTGAACTGTAAACGTTTCGATCCGGGGCACC
GGCCGAACCTTTGGGCCGGTCGCTTCCTTCTTCCTCGGGTCTCCCGCATCTCGCGCACACAGCACCCCCACATCTCGCGC
AGCTCGCCGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCGACCATGCTCTCAAGCCCGCGGCGCCCATCCCATCCTGCGCGGTGACCATCCCATCTCGCCGG
TAACCGGGGTGACCACGGGAGATGCTGCAACCGGGGGCAACGGGGTGCTACCATGGGGATGTCCATGTGCTGCAACCCCG
CGGCAGCCTGGGTGCTTGACTGCGATGACCGAGGTGACCGCAGGCTGCAACCACAGCTTTTCCGTCGCCGATAGCCGTTT
GAAGCTTTTTCGATATATGGTTGAAGCTTTCTCTGTCAACATTTGCAACTTTTCTCTGGTTGCAGTGTCTTGTTGGAGCA
TTTTTGTCCAACGGTTGAAGCTGCTTTCATACACGGTTGAAGTTTTTTTCATCCACGCTTGAAGCCTTTTGTAACGTTTG
AAACTTCTTTCGTTTTGAGCAGCGCTTTGGTTAAAGCTCTCTCCTATCATATGGTTGAAACTTTTTTCATCTAAGGTTGA
AGCATTTTCGCACCAGCAGTTGCAAATCCCCCCTATTTTGCAGTGCTGGTTGAAGCTTTTCTATCTAGGGGTTGAAGCTT
TTCCATCCCGGGGTTGAAGCTTTTTTTCCAGCGTTTTGCAACACAGGGCATGTGCGACGGTTCAAGCCTTGCCTCGATTC
AATCATGAGCTCGTCGTCGAGGGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCGAGGGCGGCAACCGGCGGTGGGGGCGGTGCCCGGCGGC
GAGGGTGGTGACTGGCGTGGGGGCGGCGAAGCTCGGTGATGCTTCGAGGTCGGGGGCCTCGCTCATCCACGGTGGCTAGA
TGCGTAGGAGGAGAAAGAAGAAGCTGGGGGCGATTTTTTTTCCGGGAACCAACGGCAGCTCGGCTCACATCTAACGCCCT
GGGCTGGACTGGCCGAAACTTTTGGCCGGCGCACCGGCGCCTATAAGCGCCCAGTTTGAACTGAGCTGAGAAAAACCACG
TGACACATGTGGTAATCAATCCTAACAAGTATTAA---------------------------------------------
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-------------------AAAAAAACTGAGCTGAGAACGGCGTTGTCGTCGACTCG---------GGAATGTTGTAGCA
TCTGTTTCTCACGTGTCATCCCATACCATGTTACGTTCCAGGCCGGCACCATATATAGCGAGAAATGCATTGAGAGACGA
TGGTC-----AGGGCTACCGAACATGCACTTTGTTTTCTGCT---CTCCATCTCATTCGTGTTGACGATGGCACTCTGGC
TTTGTATGGCCGGCGCCAGACCATATGCAGCCTAGCTGGTCGTCGAGGAAGTTTTAAGTCAACCTAATTTTC--------
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-------AGAAATTCCAGCAAAGCATTTGAAAC-----------------------------------------------
------------------------------------AGTTGACGAATAACATGCCAAAACTGAAGAAATCACGTAGCGGT
AAGAGC---AGTAAAATGGACAGTTTGGGCCCCTGCAGGAGCAGTAGCTTTACCATCTTTACAGCTCAAAACTCACAGTT
TCTTA--------------AACTGGCACGGAG--AAGATAGAGCAGTGAGTTATCTATTGC----ATAGCACGCCAGGGT
TCCAAGTCTCCAAGATCAGCAAGACAA--------CAGCACTTGAAGCAGCTTAAACCCCTCCAGTTTACAGGTTCC---
-----TCTCAACATTACAATGCCAAGGATTAAGCTCAACTCCAGATTCCGTAATGGCATACAT----GTAATAGCTGATG
ATAACAAGATCCCAGAACAGTCTAAGGCAAGGCACTCGTAGTCCCAACTTCACCCTCTAAAAGA------TACTGATGCA
TCCAAAGTTAAAAGGAC-------ATAACATTGAGCCATGTAAAACAAAGCCAAAAA-----------TATGCAAGACAT
CCATCAGATTTTGCCCAAAGTGTGGTTGAGCAAGTTGTAAACAC------------------------------------
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>SNPs
----S---------------------------------------------------------------------------
--------------------------------S-------S---------SS----------------------------
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-----------------------S-----------SSS-------S----------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
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---------------------S----------------------------------------------------------
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-------------------------------------------------------------------------S------
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-------------------------------------------------------------------------------S
---S-SSS--S--S----------------S-SS--SS---------------S--------------------------
----------------------------------S---------------------------------------------
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-------------------------------S-----------------------------------------------S
-----------------S-------------------------------------------------------------S
S-----------------------------------------------S-------------------------------
------S--------------------------------------------------S------------------S---
--------------------------SSS---------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
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------------S-S-----------------------------------------------------------------
------------------------------S----------------------------------------S--------
--------------S-SS--------------------------------------------------------------
--S------------S-S--S--------SSSS-SSSS-----------------------------S------------
---------S--S---S-SS-S-SS-------------------------------------------------------
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-----------------------------------SS-S-----------------------------------------
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--------------------------------------------------------------------------SSSS-S
-SSSSS-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSS-SS-SSS-SSSSSS-SSS-SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS---------------SS---S--------S----------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
------SSS-----------------------------------S---------------------------------S-
-------S-----------------------S------------------------S-----------------------
--------------------------SSSSSSSS----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S-------S--------------------------------------
---------S----------------------------------------------------------------------
--------S----------------S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS
>forward_3607
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-------------------------------------------------------------------CAGAGCGCGCATA
GGTTTAT-------------------------------------------------------------------------
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>reverse_8513
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--------------------------------CACGCTGATCACCCTGACAT----------------------------
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----------
