>input_sequence_75635
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ATGATGGCTTCACGAGCCGCCGCTGCTCTCCGCACGGCC
GCCCTGCAGGGCCACTTCCGGAGGTCGGCCTCCACCGCGGCGGCGCACGCCGAGAGGCCCAAGGCCAAGCCCATGGGCGA
CTACGTGCCGGTGTACGTGGCGCTGGGGATGATCGGCCTGGCGGGGGCGCTGGGGCTGCACACGGCGCGGCAGCAGCTGG
CGCACGCGCCCAACGTCTGGGTCGACAAGCGCAAGCGCGAGGCGGTGCCCGAGGTGGCGGACCCGGACCTCGCCCTCGAC
GAGGCCGAGCGCTTCGTCGGCGGCTCCGTGTTCCGCAAGGTCGCCCACGTCCAGGACGACCGCTCCCTCACCGCCGGCGT
CGCCGACCCCGTCGCCGACTACCCGTACGAC-------------------------------TCACTTCCTGCGCGCACA
GTGGTGGTTTGATTGAT----GTACGTGACTGATGTTGGATGATTTGTGTT----CCTCAGGGCCAGGAAGGCGGTGACG
CTCAAGGACGTCGGCGTAGACCCGCCGGGGATCCCCGAGCAGAGCAGGGAGGGCGTCCTCGACAGGATCTTCAAGAAGGA
CACCGCTTAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr6A_1_TraesCS6A01G295000
ATAAAAGAAAAATAAAAATGTATGCACATTACGACATGTTCGTCATTTTATCAGCCTTTTTTGACTGAGAAAACTTCAGA
AAACGCCAAATTTATCGAAAATCAAAACAACTTGACATGGTGCCTTTAGTTAGTAATATAAGACCGTGAAAAAAATTAGG
GTCATCTGATGGATGCCGAATAAAAATGCTCTCAAACGGATTCTTCTCGCTTACCTGAATGCATTCTGTTGAACATGATC
TATTTTTAATCTACATGAAATAACCCGAACTTTTTTCGGTAAGTTGGTATGCCCATGATAAATATCCATGTCAGGTTTGA
ACGAATTTCAACATCGTATGCAAGTTGCGCCACATCTAGTTATTTATCGGCCAGTTTTCACCGAGAAAACTCTAAACATT
TGAATGAATAAAATTTCAAGAAACGTCCAGGTCTTAGGGCCAGTTCTTTTGGGCGATTCTCCCAGAATCGCCCTTTCCCC
AGCTTCTCCCAGAATCGTCATTTTATATATTTTTGTCAATCCTGTCTAGTTAAAGTCTAATTAGTTAGGATTGTAAAAAA
ATATAAAATGGCGATTCTGGAAGAAGCTGAGGAGAAGGACGATTCTGGGAGAATCACCGAAAAGAAGGGGCCATACGTCT
AGTGTATGTAATAATCCATAAAAAAGTGTACGTAGTAGCAATCGAGAACAAACTGCATGATAGATGCATACGGCCGTGTG
CACGAACGAGGTACACGTAACTAATCGCATGTGCCCTCCAAACGCGGCGGGGTCACGCTGGCGCGTCGCCGCCCTGCCGC
GCGTCGCCACCTTGCTCCCGCCCGTTCCAGACGCTTCGCCACTCGCCACGAGGCCACCGAGCCGCCCCTATAAGATAAGC
CACCGTCACAGACTCCCATCAGCTCACAAAGCGAAACAGAAGAAGCACTCACCCAGAGAAATCCAAACCACACTCAGATC
GTCGCCACTCTCTGCTGATATCGC-CCCCAGGCTAGCAGCCATGATGGCTTCACGAGCCGCCGCTGCTCTCCGCACGGCC
GCCCTGCAGGGCCACTTCCGGAGGTCGGCCTCCACCGCGGCGGCGCACGCCGAGAGGCCCAAGGCCAAGCCCATGGGCGA
CTACGTGCCGGTGTACGTGGCGCTGGGGATGATCGGCCTGGCGGGGGCGCTGGGGCTGCACACGGCGCGGCAGCAGCTGG
CGCACGCGCCCAACGTCTGGGTCGACAAGCGCAAGCGCGAGGCGGTGCCCGAGGTGGCGGACCCGGACCTCGCCCTCGAC
GAGGCCGAGCGCTTCGTCGGCGGCTCCGTGTTCCGCAAGGTCGCCCACGTCCAGGACGACCGCTCCCTCACCGCCGGCGT
CGCCGACCCCGTCGCCGACTACCCGTACGAC-------------------------------TCACTTCCTGCGCGCACA
GTGGTGGTTTGATTGAT----GTACGTGACTGATGTTGGATGATTTGTGTT----CCTCAGGGCCAGGAAGGCGGTGACG
CTCAAGGACGTCGGCGTAGACCCGCCGGGGATCCCCGAGCAGAGCAGGGAGGGCGTCCTCGACAGGATCTTCAAGAAGGA
CACCGCTTAATTTCGA-GAGGAGCAGGCAACAGCACGCTTCAGCTTCAGTCCCTTTATTGCGTTAACTAGCTACGAGTAC
ATTTGTGTTTCAATAGTCTGATCGGCTGCACTTTTTCTGGAAGCTGGTCGGTGTATCGCGAACGTGACACGTGATGGGGT
TGTACATATGTATCCACTCATATCAAGAACTCTAGTTTGTTC-TGGACAAT-AAATTATGCACCTGCGCCGCGAGGCGTG
ATCGTTGTTTTGAGTTTGAAATGCTAGGGTTTAGTACGATCTGAAGGACCGCTAACGCACCTAGCATCCGAATAGGCCTG
AAGATGTATGTACTTTCTTCGGTCATTTTTACTCTGCATATTAGAATTTTCTAAAGTCAAACTTCACAAAGTTTGACCGT
ATTTATATGAAAAAATACCAACATCTGTCATGCTAAAATTATATAATATGAAACTTTAGGTCATGACACATCTAGTGGTA
TTGATTTCAGATTGTGAATGTTGACACTTATTTTTACAAAGCTTGTGAATGTTGACACTTATTTTTACAAAGCTCGTCAA
ATTTTACGAGGCTTGACTTTAGTCAAATTTTATATGCGATGAACTGAAATGATAAAAGAACAGAACCCTGACGATGTATG
TGATGAACTGAAACGAGGAAAGAACAGACCAAAAAAACACAGTATTCAGAGAAGTGAATTGACGAAGATAAACGAGGAAC
ATAGAGATAAAACATGGAAAGGCCTGAAGACAAAAGAAACACAGTAAGCAGAGAAGTGAATTGACGAAGATAAAACGAGG
AACATGAAGATAAAACAAGGAAAGGCCTGAAGATGTATGTAATGAACTGGAACAGAGGAACATGAATAAGAGAAGTATAG
ACAATGAGAGATCATGCTGCAGAGATATAGAGAACATGAAGATAAAACGAGGAAAGAACATATGATGAAGAGATCGTGGA
AGATATCAAAAACACGAACCGAAGTACTAGGAGCATAAACAAACTGATTCGAG
>chr6D_655
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TCCATAAAAAAGTGTACGCAGTAGCAATCGAGAACAAACTGCATGATAGATGCATACGGCCGTGTG
CACGAACGAGGTACACGTAACTAATCGCATGTGCCCTCCAAACGCGGCGTGGTCACGCTGGCGCGTCGCCGCCCTGCCGC
GCGTCGCCACCTTGCTCCCGCCCGTTCCAGACTCTTCGCCACTCGCCACGACACCACCGAGCCGCCCCTATAAGATAAGC
CACCGTCACAGACTCCCATCAGCTCA--AAGCGAAACAGAAGAAGCACTCACACAGAGAAATCCAAACCACACTC-GATC
GTCGCCACTCTCTGCTGATATCACA-CCCAGGCTAGCAGCCATGATGGCTTCACGAGCCGCCACCGCGCTCCGCACGGCC
GCCCTGCAGGGCTACTTCCGGAGGTCGGCCTCCACCGCGGCGGCGCACGCCGAGAGGCCCAAGGCGAAGCCCATGGGCGA
CTACGTGCCGGTGTACGTGGCGCTGGGGATGATCGGCCTGGCGGGGGCGCTGGGGCTGCACACGGCGCGGCAGCAGCTGG
CGCACGCGCCCAACGTCTGGGTCGACAAGCGCAAGCGCGAGGCGGTGCCCGAGGTGGCGGACCCGGACCTCGCCCTCGAC
GAGGCCGAGCGCTTCGTCGGCGGCTCCGTGTTCCGCAAGGTCGCCCACGTCCAGGACGACCGCTCCCTCACCGCCGGCGT
CGCCGACCCCGTCGCCGACTACCCGTACGACCACGCCGTTCCTCGTTCCTATCGATTGGTTATCACTTCCTGCGCGCAGA
GTGGTGGTTTGATTGAT----GTACGTGACTGATGTTGGATAACTTGTGTT----TCTCAGGGCGAGGAAGGCGGTGACG
CTCAAGGACGTCGGCGTGGACCCGCCGGGGATCCCCGAGCAGAGCAGGGAGGGCGTCCTCGACAGGATCTTCAAGAAGAA
CACCGCTTAATTTCGTAGAGGAGGGGCAGTCAGGACGCATCAGCTTCATTCCCTTTCTTGCGTTAACTAGCTAGCTTTGC
------GTTTCAATAGTCAGATCGGCTGCACTTTTTCTGGAAGCCGGTCGATGTTTCGCGAACGTGACACGTGATGGTGT
TGTACATATGTATCCAGTCATCTCGAGAAGTATGGTTTGTTCATGGACAATAAAACTATGC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr6B_660
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AAAAAAAAATACGTATAGTG-ATCGAGAACAAACTGCATGACAGATGCATACGGCCGTGTG
CAGGAACGAGGTACACGTAACTGATCGCATGTGCTCTTCAAGC---GCGGGGTCACGCTGGCGCATCCTCGTCCTGCCGC
GCGTCGCCACCTTGCCCCCGTCCGTTCCAGACGCTTCGCCACTCGCCACGACGCCACCGAGCCGCCCCTATAAGATAAGC
CACCGTCACAGACTCCCATCAGCGCA--AAGCGAAACAGAAGAAGCACTCGCACAAAGAAAGCCAAACCACACTC-GATC
GCCGCCACTCTCTGCTGATACCACACCCCAGGCTAGCAGCCATGATGGCTTCACGAGCCGCCGCCGCTCTCCGCGCGGCC
GCCCTGCAGGGCTACTTCCGGAGGTCGGCCTCCACCGCGGCGGCGCACGCCGAGAGGCCCAAGGCCAAGCCCATGGGCGA
CTACGTGCCGGTGTACGTGGCGCTGGGGATGATCGGCCTGGCGGGGGCGCTGGGACTGCACACGGCGCGGCAGCAGCTGG
CGCACGCGCCCAACGTCTGGGTCGACAAGCGCAAGCGCGAGGCGGTGCCCGAGGTGGCGGACCCGGACCTCGCCCTCGAC
GAGGCCGAGCGCTTCGTCGGCGGCTCCGTGTTCCGGAAGGTCGCCCACGTCCAGGATGACCGCTCCCTCACCGCCGGCGT
CGCCGACCCCGTCACCGACTACCCGTACGACCTCACCATTCCTCTTTCC-ATCCATTGGTTATCACTTCCTGCGCGCACA
GTGGTGCTTTGGTTGGTGTACGTACGTGACTGATGTTGGATGATTTGTGTTTCTTTCTCAGGGCGAGGAAGGCTGTGACG
CTCAAGGACGTCGGCGTGGACCCGCCGGGAATGCCCGAGCAGAGCAGGGAGGGCGTCCTCGACAGGATCTTGAAGAAGAA
CACCGCTTAATTTCGGGGAGGAGCAGGCAACAGCACGCTTCAGATTCAGTCCCTTTCTTGCGTTAACTAGCTAGATTTGC
------GTCTCAATAGTCAGATCGGCTGCACTTTTTCTGGAAGCCGGTCCATGTATCGCGAACGTGACACGTGATGGTGT
TGTAAATATGTATCCAGTCATCTCGAGAATTCTAGTTTGTTCCTCGT-AATAAAACTATGCACCTGCGCCGCGAGGCGTG
ATGTTG---TTGAGTTTGAAATGATAGGTTTTAG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------SS------------------------S----------------------S----
----------------------S-----------------------------------------S---------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S--------S---------------
-----------------S------------------------------------------------------------S-
---------------S----------------------------------------S----------------SSSS-S-
SSSSSS------------S-------------------------S-----S--------------------------S--
----------------S----S--S----S-------------------------S------------------------
--SS-SSSS--------------S----S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_645
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AGGGGCCATACGTCT
AGTGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1894
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AACGCACCTAGCATCCGAAT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
